These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12936#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1423 fasta sequence [CTCTTCTCTTGTTTCTTCCCATCCCATCCTCTTCTCCTCCGCATTTTGCTCTTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTTCCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGGTTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAATAGTAACCAAAAGAAGCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGAAGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACAGGGCATTAAGTGGTGTCGTGCCCCTCGTCGCAAAGATGATGACACCCCCGGCTGGTATGAAACTGAGATGCCCACCT-GCAGTAGTTGCCGCCCGTGCAGCACTATCACGCACAGCCTTTGCCAAGGGGCTTCGTCCTCAGCCCCTACCGACGAAAATACTGGTGATGGCGTTGC-TT-GGTATGGCAGCAAACGTT-CCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTTTGCCGCAGTCCATGCGGCGGTACCTTTCATAGGCATGCTCAGGAAGTC-TGTGCTGATGCCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCGAGAGCTGAGCGTATCAGATTGAAGAGGGCAGCAAAGGTTGCTGCTGGTAGCCAGGGTGATGCTAGCACCAGAATGAGCCT-GAAAA-CCGGGAGATACACT-GATGATGTCCAGTTCTGGGATCCGCTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTCTTGT-TCCAACTT-TCCATT-GAT-GAT-GTGCCTTGGGTTTGTTTCTTCGGTCGATTATTGTTGTATTCATTGTGTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGATGCTTCTCCCATGAATCTGGGGTCCAAATTTCAGTGTACAATAAATTGCACGTGTACATTTCCGAAAAAAAAAAAGCTTAAGCTTTTTTTTTTTCACAACAAGCACACAACCACCTTTTACTGCCTGCA] [+] EMBL CF318263 [CTCTTCTCTTGTTTCTTCCCATCCCATCCTCTTCTCCTCCGCATTTTGCTCTTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTTCCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGGTTTTTTC ] [+] EMBL AK072734 [ TGTTTCTTCCCATCCCATCCTCTTCTCCTCCGCATTTTGCTCTTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAG TTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTTCCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGGTTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAATAGTAACCAAAAGAAGCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGAAGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACAGGGCATTAAGTGGTGTCGTGCCCCTCGTCGCAAAGATGATGACACCCCCGGCTGGTATGAAACTGAGATGCCCACCT GCAGTAGTTGCCGCCCGTGCAGCACTATCACGCACAGCCTTTGCCAAGGGGCTTCGTCCTCAGCCCCTACCGACGAAAATACTGGTGATGGCGTTGC TT GGTATGGCAGCAAACGTT CCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTTTGCCGCAGTCCATGCGGCGGTACCTTTCATAGGCATGCTCAGGAAGTC TGTGCTGATGCCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCGAGAGCTGAGCGTATCAGATTGAAGAGGGCAGCAAAGGTTGCTGCTGGTAGCCAGGGTGATGCTAGCACCAGAATGAGCCT GAAAA CCGGGAGATACACT GATGATGTCCAGTTCTGGGATCCGCTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTCTTGT TCCAACTT TCCATT GAT GAT GTGCCTTGGGTTTGTTTCTTCGGTCGATTATTGTTGTATTCATTGTGTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGATGCTTCTCCCATGAATCTGGGGTCCAAATTTCAGTGTACAATAAATTGCACGTG ] [+] EMBL AK104136 [ TCTCCTCCGCATTTTGCTCTTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTTCCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGGTTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAATAGTAACCAAAAGAAGCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGAAGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACAGGGCATTAAGTGGTGTCGTGCCCCTCGTCGCAAAGATGATGACACCCCCGGCTGGTATGAAACTGAGATGCCCACCT GCAGTAGTTGCCGCCCGTGCAGCACTATCACGCACAGCCTTTGCCAAGGGGCTTCGTCCTCAGCCCCTACCGACGAAAATACTGGTGATGGCGTTGC TT GGTATGGCAGCAAACGTT CCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTTTGCCGCAGTCCATGCGGCGGTACCTTTCATAGGCATGCTCAGGAAGTC TGTGCTGATGCCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCGAGAGCTGAGCGTATCAGATTGAAGAGGGCAGCAAAGGTTGCTGCTGGTAGCCAGGGTGATGCTAGCACCAGAATGAGCCT GAAAA CCGGGAGATACACT GATGATGTCCAGTTCTGGGATCCGCTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTCTTGT TCCAACTT TCCATT GAT GAT GTGCCTTGGGTTTGTTTCTTCGGTCGATTATTGTTGTATTCATTGTGTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGA ] [+] EMBL AU108703 [ TCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTTCCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGGTTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAATAGTAACCAAAAGAAGCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGAAGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACAGGGCATTAAGTGGTGTCGTGCCCCTCGTCGCAAAGATGATGACACCCCCGGCTGGTATGAAACTGAGATGCCCAACTGGCAGTAGTTG CGNCCGTG ] [+] EMBL AU108702 [ GTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACAGGGCATTAAGTGGTGTCGTGCCCCTCGTCGCAAAGATGATGACACCCCCGGCTGGTATGAAACTGAGATGCCCACCT GCAGTAGTTGCCGCCCGTGCAGCACTATCACGCACAGCCTTTGCCAAGGGGCTTCGTCCTCAGCCCCTACCGACGAAAATACTGGTGATGGCGTTGC TT GGTATGGCAGCAAACGTT CCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTTTGCCGCAGTCCATGCGGCGGTACCTTTCATAGGCATGCTCAGGAAGTC TGTGCTGATGCCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCGAGAGCTGAGCGTATCAGATTGAAGAGGGCAGCAAAGGTTGCTGCTGGTAGCCAGGGTGATGCTAGCACCAGAATGAGCCT GAAAA CCGGGAGATACACT GATGATGTCCAGTTCTGGGATCCGCTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTCTTGT TCCAACTT TCCATT GAT GAT GTGCCTTGGGTTTGTTTCTTCGGTCGATTATTGTTGTATTCATTGTGTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGATGCTTCTCCCATGAATCTGGGGTCCAAAaaaaa ] [+] EMBL BM038199 [ gnTGATGGCTTTGCGTTNGTTAT GCAGCCAACGTTCCCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGGTT CC CAGTCCAT CGGCGGTACCTTTCATAGGCATGCTCAGGAA TCTTGTGCTGATGCC AAGACAGCCATGGCGCTTACCATAGCGGCCTCAATATTGGGTCAGACNATTGGTTCGAGAGCTGAGCGTATCAGATTGAAGAGGGCAGCAAAGGTTGCTGCTGGTAGCCAGGGTGATGCTAGCACCAGAATGAACCTGGAAAACCCGGGAGATACACTGGATGATGTCCAGTTCTGGGATCCGCTTGCCCTCAGAGTTGAGAGTACCATAGGAGCAGGAACTCCGGTTCTTGTGTCCCACTTGTCCATTGGATGGATGGTGCCTTGGGTTTGTTTCTTCGGTCGATTATTGTTGTATTCATTGTGTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGATGCTTCTCCCATGAATCTGGGGTCC AATTTCAGTGTACCAT CCCCGCACGTGTACATTTCCGAAAAAAA ] [+] EMBL AU165228 [ GTGCCTTAGTCTTTATACTAAATATTACGTTGGATGCTTCTCCCATGAATCTGGGGTCCAAATTTCAGTGTACAATAAATTGCACGTGTACATTTCCGAAAAAAAAAAAGCTTAAGCTTTTTTTTTTTCACAACAAGCACACAACCACCTTTTACTGCCTGCA] consensusID : consensus_12936#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence [CATGGACTGAGGAGTAGAAATTCCCATCCCATCCTCTTCTCCTCCGCATTTTGCTCTTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTTCCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGGTTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAATAGTAACCAAAAGAAGCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGAAGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACA] [+] EMBL CF320517 [CATGGACTGAGGAGTAGAAATTCCCATCCCATCCTCTTCTCCTCCGCATTTTGCTCTTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTTCCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGGTTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAATAGTAACCAAAAGAAGCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGAAGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACA] consensusID : consensus_12936#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 569 fasta sequence [CGACGAAAATACTGGTGATGGCGTTGCTTGGTATGGCAGCAAACGTTCCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTTTGCCGCAGTCCATGCGGCGGTACCTTTCATAGGCATGCTCAGGAAGTCTGTGCTGATGCCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCGAGAGCTGAGCGTATCAGATTGAAGAGGGCAGCAAAGGTTGCTGCTGGTAGCCAGGGTGATGCTAGCACCAGAATGAGCCTGAAAACCGGGAGATACACTGATGATGTCCAGTTCTGGGATCCGCTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTCTTGTTCCAACTTTCCATTGATGATGTGCCTTGGGTTTGTTTCTTCGGTCGATTATTGTTGTATTCATTGTGTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGATGCTTCTCCCATGAATCTGGGGTCCAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGGTAGCGTATCGTTGACAG] [-] EMBL CF320516 [CGACGAAAATACTGGTGATGGCGTTGCTTGGTATGGCAGCAAACGTTCCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTTTGCCGCAGTCCATGCGGCGGTACCTTTCATAGGCATGCTCAGGAAGTCTGTGCTGATGCCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCGAGAGCTGAGCGTATCAGATTGAAGAGGGCAGCAAAGGTTGCTGCTGGTAGCCAGGGTGATGCTAGCACCAGAATGAGCCTGAAAACCGGGAGATACACTGATGATGTCCAGTTCTGGGATCCGCTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTCTTGTTCCAACTTTCCATTGATGATGTGCCTTGGGTTTGTTTCTTCGGTCGATTATTGTTGTATTCATTGTGTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGATGCTTCTCCCATGAATCTGGGGTCCAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGGTAGCGTATCGTTGACAG] consensusID : consensus_12936#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence [TTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTGAGGTGACCTCTTCTCTCCAGTCTCCTCTCCTTAGTAGGATTAGGATCATTACGAATTTAGGATCGAGAATATAGGATTATGAACCAGTAGTATTAGGATTATGTTTTCTTCGATTCTTTTTCTCCTTCAAATCAATTCCCAATTCGATTTAGGGTTGACGGATACGCGAGCAGGGATAGCCCTCCCGCCCGCAGAAAGATTGGGCTTTCTTGGTTTCCCTGTCGTAATCCCTTCTCTCCAGCCAACGCGGTGAAAATTTTGTTTCGGTGGGGGTGGGGTGGGTGGTTGCCGGGTAGGTGCTGGTGCATCTGCTTTCAGTTTCACCACCACCATGGATTGGCCGCTAAACATATACTGATATACACCTGTTTCCTGTCCCCTACCCCTAGGCTAGACTACTA] [+] EMBL AK062821 [TTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTGAGGTGACCTCTTCTCTCCAGTCTCCTCTCCTTAGTAGGATTAGGATCATTACGAATTTAGGATCGAGAATATAGGATTATGAACCAGTAGTATTAGGATTATGTTTTCTTCGATTCTTTTTCTCCTTCAAATCAATTCCCAATTCGATTTAGGGTTGACGGATACGCGAGCAGGGATAGCCCTCCCGCCCGCAGAAAGATTGGGCTTTCTTGGTTTCCCTGTCGTAATCCCTTCTCTCCAGCCAACGCGGTGAAAATTTTGTTTCGGTGGGGGTGGGGTGGGTGGTTGCCGGGTAGGTGCTGGTGCATCTGCTTTCAGTTTCACCACCACCATGGATTGGCCGCTAAACATATACTGATATACACCTGTTTCCTGTCCCCTACCCCTAGGCTAGACTACTA] consensusID : consensus_12936#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence [GNTGGCAGGGACNTCNGGCACGAGTTCATTCATTTNGTTGCTTGTTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGNTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTNACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGTCCNAATTTTTGAAGATGGACCCNAATTTTGACATGGCAATTTCGAGTTTTCCATGGCCAAGATGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCNAATGCCNAAAGCC] [+] EMBL AA752921 [GNTGGCAGGGACNTCNGGCACGAGTTCATTCATTTNGTTGCTTGTTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGACCCCTTGTGCTTGGAAGACAACTCCGNTCCAACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTNACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAGAGGAGACAAGGTCCNAATTTTTGAAGATGGACCCNAATTTTGACATGGCAATTTCGAGTTTTCCATGGCCAAGATGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCNAATGCCNAAAGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12936#0 CTCTTCTCTTGTTTCTTCCCATCCCATCCTCTTCTCCTCCGCATTTTGCTCTTCATTCAT 60 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 TTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTTTCCTCCGATCCTCCGCTTCGTTCGA 120 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 ATCCCACAGGTCAGTTTGTGGTGTTCATATGGATCCCTTTTTCCGCAGAGCTTCCAGTGA 180 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 CCCCTTGTGCTTGGAAGACAACTCCGTCCAACATGGAATTGAAAGATGCCCATTCCTAAG 240 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 GAACATCAATGAGCCTACAAGTTTTTCATTCTCGTCCGTTAATTTTCCTGTTCCTGCAAG 300 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 AGGAGACAAGGGTCCAATTTTTGAAGATGGACCCAATTTTGACATGGCATTTCGAGTTTT 360 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 CCATGGCCAAGATGGGGTTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCC 420 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 AATGCCAAAGCCCAATCCTGAATTTAACCCCTTGGCTGCTAAAGCAGCTACCATCAGTCT 480 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 CTCTGCATTTGGAGGTTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAA 540 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 TAGTAACCAAAAGAAGCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGA 600 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 AGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACAGGGC 660 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 ATTAAGTGGTGTCGTGCCCCTCGTCGCAAAGATGATGACACCCCCGGCTGGTATGAAACT 720 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 GAGATGCCCACCTGCAGTAGTTGCCGCCCGTGCAGCACTATCACGCACAGCCTTTGCCAA 780 consensus_12936#2 ------------------------------------------------------------ consensus_12936#1 ------------------------------------------------------------ consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 GGGGCTTCGTCCTCAGCCCCTACCGACGAAAATACTGGTGATGGCGTTGCTTGGTATGGC 840 consensus_12936#2 -----------------------CGACGAAAATACTGGTGATGGCGTTGCTTGGTATGGC 37 consensus_12936#1 --------------------CATGGACTGAGGAGTAGAAATTCCCATCCCATCCTCTTCT 40 consensus_12936#4 --------------------------------------------GNTGGCAGGGACNTCN 16 consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 AGCAAACGTTCCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTT 900 consensus_12936#2 AGCAAACGTTCCCCTTGGCATCTGGAGGGAGCACACGGAGAAATTCTCAGTGCAGTGGTT 97 consensus_12936#1 CCTCCGCATTTTGCTCTTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTT 100 consensus_12936#4 GGCACGAGTTCA----TTCATTTNGTTGCTTGTTGCTCTCCACGCGCCCTCGCCTCTCTT 72 consensus_12936#3 ----------------TTCATTCATTTGTGCTGTGCTCTCCACGCGCCCTCGCCTCTCTT 44 *** * * * * ** ** consensus_12936#0 TGCCGCAGTCCAT-GCGGCGGT-ACCTTTCATAGGCATGCTCAGGAAGTCTGTGCTGATG 958 consensus_12936#2 TGCCGCAGTCCAT-GCGGCGGT-ACCTTTCATAGGCATGCTCAGGAAGTCTGTGCTGATG 155 consensus_12936#1 TCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATC 160 consensus_12936#4 TCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTCAGTTTGTGGTGTTCATATGGATC 132 consensus_12936#3 TCCTCCGATCCTCCGCTTCGTTCGAATCCCACAGGTGAGGTGACCTCTTCTCTCCAGTCT 104 * * * *** ** ** * * ** *** * * * * * consensus_12936#0 CCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCG 1018 consensus_12936#2 CCAAAGACAGCCATGGCGCTTACCATAGCTGCCTCAATATTGGGTCAGACAATTGGTTCG 215 consensus_12936#1 CC---TTTTTCCGCAGAGCTTCCAGTGACC-CCTTGTGCTTGGAAGACAACTCCGT-CCA 215 consensus_12936#4 CC---TTTTTCCGCAGAGCTTCCAGTGACC-CCTTGTGCTTGGAAGACAACTCCGNTCCA 188 consensus_12936#3 CC---TCTCCTTAGTAGGATTAGGATCATTACG--AATTTAGGATCGAGAATATAGGATT 159 ** * ** * * * ** consensus_12936#0 A----GAGCTGAGCG-TATCAGATTGAAGAGGGCAGCAAAGGTTGCTG-CTGGTAGC-CA 1071 consensus_12936#2 A----GAGCTGAGCG-TATCAGATTGAAGAGGGCAGCAAAGGTTGCTG-CTGGTAGC-CA 268 consensus_12936#1 ACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTA--CAAGTTTTTCA 273 consensus_12936#4 ACATGGAATTGAAAGATGCCCATTCCTAAGGAACATCAATGAGCCTNA-CAAGTTTTTCA 247 consensus_12936#3 AT---GAACCAGTAG-TATTAGGATTATGTTTTCTTCGATTCTTTTTCTCCTTCAAATCA 215 * ** * * * * * * ** consensus_12936#0 GGGTGATGCTAGCACCAGAATGAGCCTGAAAACCGGGAGATACACTGATGATGTCCAGTT 1131 consensus_12936#2 GGGTGATGCTAGCACCAGAATGAGCCTGAAAACCGGGAGATACACTGATGATGTCCAGTT 328 consensus_12936#1 TTCTCGTCCGTTAATTTTCCTGTTCCTGCAAG--AGGAGACAAGGGTCCAATTTTTGAAG 331 consensus_12936#4 TTCTCGTCCGTTAATTTTCCTGTTCCTGCAAG--AGGAGACAAGGTCCNAATTTTTGAAG 305 consensus_12936#3 ATTCCCAATTCGATTTAGGGTTGACGGATACGCGAGCAGGGATAGCCCTCCCGCCCGCAG 275 * * * * ** * consensus_12936#0 CTGGGATCCG----CTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTC 1187 consensus_12936#2 CTGGGATCCG----CTTGCCCTCAGAGTTGAGAGTACCATAGGAACAGGAACTCCGGTTC 384 consensus_12936#1 ATGGACCCAA---TTTTGACATGGCA-TTTCGAGTTTTCCATGGCCAAGA----TGGGG- 382 consensus_12936#4 ATGGACCCNAA--TTTTGACATGGCAATTTCGAGTTTTCCATGGCCAAGA----TGG--- 356 consensus_12936#3 AAAGATTGGGCTTTCTTGGTTTCCCTGTCGTAA-TCCCTTCTCTCCAGCCAACGCGGTGA 334 * *** * * * * ** ** consensus_12936#0 TTGTTCCAACTTTCCATTGATGAT----GTGCCTTGGGTTTGTTTCTTCGGTCGATTATT 1243 consensus_12936#2 TTGTTCCAACTTTCCATTGATGAT----GTGCCTTGGGTTTGTTTCTTCGGTCGATTATT 440 consensus_12936#1 TTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCAA-TGCCAAAGCCCAAT 441 consensus_12936#4 TTGTTCCACTTTCACATGGATCATTTGAGCGATTTGAGAAGCCNAATGCCNAAAGCC--- 413 consensus_12936#3 AAATTTTGTTTCGGTGGGGGTGGGGTGGGTGGTTGCCGGGTAGGTGCTGGTGCATCTGCT 394 ** * * * * * * * consensus_12936#0 GTTGTATTCATTGT-GTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGAT---GCTT 1299 consensus_12936#2 GTTGTATTCATTGT-GTTGTGCCTTAGTCTTTATACTAAATATTACGTTGGAT---GCTT 496 consensus_12936#1 CCTGAATTTAACCC-CTTGGCTGCTAAAGCAGCTACCATCAGTCTCTCTGCATTTGGAGG 500 consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 TTCAGTTTCACCACCACCATGGATTGGCCGCTAAAC-ATATACTGATATACACCTGTTTC 453 consensus_12936#0 CTCCCATGAATCTGGGGTCCAAATTTCAGTGTACAATAAATTGCACGTGTACATTTCCGA 1359 consensus_12936#2 CTCCCATGAATCTGGGGTCCAAA-----AAAAAAAAAAAAAAACACTGTCATGCCGTTAG 551 consensus_12936#1 TTTTTTCAGCTTTGGTGATTTCTCAAATAAGCGCAATAAGAAGAATAGTAACCAAAAGAA 560 consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 CTGTCCCCTACCCCTAGGCTAGACTACTA------------------------------- 482 consensus_12936#0 AAAAAAAAAAGCTTAAGCTTTTTTTTTTTCACAACAAGCACACAACCACCTTTTACTGCC 1419 consensus_12936#2 GTAGCGTATCGTTGACAG------------------------------------------ 569 consensus_12936#1 GCCCAACAACCTTCCCCAGAACGGAGGTCAGCCTAATAACCATGAAGCACTGAGCAATGA 620 consensus_12936#4 ------------------------------------------------------------ consensus_12936#3 ------------------------------------------------------------ consensus_12936#0 TGCA------------------------------------- 1423 consensus_12936#2 ----------------------------------------- consensus_12936#1 GTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACA 661 consensus_12936#4 ----------------------------------------- consensus_12936#3 ----------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||