These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12946#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2600 fasta sequence [GACTATCTTCAATTCTTCATCCCCTCTTCGCTCTCATCAACAAGCAAATCGAGAAAAAAAAAAGAAGGGGAGAAAAAATAATATAATAACAGAAAAGGAGATGAAAAAGGAGTTCCCCGGCCAAGTGCCGACGAGTCGGTTACACTCCGAGATGGACGCGGCGGCGGCCGGCGGGGGCGGGGCGGCAAAGCGGAAGCGCAGCTTCTCCGAGGACGACGCCTACCTCATCCTGCACAGGTACCAGCCGGCGACGATCCTGACGATGCTGCAGGAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAGCATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAAAATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGATCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA-TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC-AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT-CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTCTCTGTGATGTCTTAGACTGATATGTTCCATTTGTTAAGCTGGCCTGAGATTATCATGCCGCCTTCCTGTACAGCCTCGCCTCTTTCTCCGTTGGATAGTTTGGTTGATTGGCCAAATATTCAGAAACTATGTCATTGTGGCCTGA] [+] EMBL AK068448 [GACTATCTTCAATTCTTCATCCCCTCTTCGCTCTCATCAACAAGCAAATCGAGAAAAAAAAAAGAAGGGGAGAAAAAATAATATAATAACAGAAAAGGAGATGAAAAAGGAGTTCCCCGGCCAAGTGCCGACGAGTCGGTTACACTCCGAGATGGACGCGGCGGCGGCCGGCGGGGGCGGGGCGGCAAAGCGGAAGCGCAGCTTCTCCGAGGACGACGCCTACCTCATCCTGCACAGGTACCAGCCGGCGACGATCCTGACGATGCTGCAGGAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAGCATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAAAATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGATCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTCTCTGTGATGTCTTAGACTGATATGTTCCATTTGTTAAGCTGGCCTGAGATTATCATGCCGCCTTCCTGTACAGCCTCGCCTCTTTCTCCGTTGGATAGTTTGGTTGATTGGCCAAATATTCAGAAACTATGTCATTGTGGCCTGA] [-] EMBL CB654878 [ GAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAAC ] [-] EMBL CB654877 [ CAGTCACAATGGAGGACTTGTTCCTTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGTTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCTTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCGTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGCCCACGTAGATACCATCTATTCTTTGAACGGCTTTCCATTTGTAGCTCAA ] [-] EMBL CB647836 [ TGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCC ] [+] EMBL AU030381 [ nGGCCNTNNCCCCCAAGGATGCAGACATTNTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAANNGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAAGCNTTATTNGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATNTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTaaaaaaa ] [+] EMBL BI808976 [ ccAAGCTCCAGTTCCACAGGGTGGGATTTCTA CGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAATCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAG TTACTTTTGAAATGTAAATA GGCCACGTAGACACCAT TATTC TTGCCCTCC TTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAAACTGGATACACCGTTTAAaaaa ] consensusID : consensus_12946#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2182 fasta sequence [GAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAACATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAATATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA-AAAGACCAAAGCTCCAGTTCCACAGGGT-GGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCC-AACACAGCGGTGAACGGGGCTAG-CAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCCCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACCCCGTTTTAAAAAAAAAAAA] [+] EMBL OSA428900 [GAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAACATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAATATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA AAAGACCAAAGCTCCAGTTCCACAGGGT GGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCC AACACAGCGGTGAACGGGGCTAG CAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCCCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACCCCGTTTTAAAAAAAAAAAA] [+] EMBL CB647835 [ GTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCACAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCT ] [+] EMBL AU183210 [ GTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA AAA ] [+] EMBL CF322900 [ AAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA AAAGACCAAAGCTCCAGTTCCACAGGGTNGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCC ACAC ] [+] EMBL BQ908061 [ TGGACCTCCAGCAACTGCGAATAAAGACCTAAGCTCCAGTTCCACAGGGT GGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAATCGGGCCAAACACAGCGGTGAACGGGGCTAGCCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGACACCATCTATTCTTTGCCCTCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAAACTGGATACACCGTTTAAAAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12946#0 GACTATCTTCAATTCTTCATCCCCTCTTCGCTCTCATCAACAAGCAAATCGAGAAAAAAA 60 consensus_12946#1 ------------------------------------------------------------ consensus_12946#0 AAAGAAGGGGAGAAAAAATAATATAATAACAGAAAAGGAGATGAAAAAGGAGTTCCCCGG 120 consensus_12946#1 ------------------------------------------------------------ consensus_12946#0 CCAAGTGCCGACGAGTCGGTTACACTCCGAGATGGACGCGGCGGCGGCCGGCGGGGGCGG 180 consensus_12946#1 ------------------------------------------------------------ consensus_12946#0 GGCGGCAAAGCGGAAGCGCAGCTTCTCCGAGGACGACGCCTACCTCATCCTGCACAGGTA 240 consensus_12946#1 ------------------------------------------------------------ consensus_12946#0 CCAGCCGGCGACGATCCTGACGATGCTGCAGGAGATGGGGAAGCAGGTGGGCGCGGGGAA 300 consensus_12946#1 -------------------------------GAGATGGGGAAGCAGGTGGGCGCGGGGAA 29 ***************************** consensus_12946#0 GGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGA 360 consensus_12946#1 GGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGA 89 ************************************************************ consensus_12946#0 GTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCC 420 consensus_12946#1 GTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCC 149 ************************************************************ consensus_12946#0 CGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGC 480 consensus_12946#1 CGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGC 209 ************************************************************ consensus_12946#0 TCCGGGTAATGAAGCATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATC 540 consensus_12946#1 TCCGGGTAATGAAACATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATC 269 ************* ********************************************** consensus_12946#0 TTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCC 600 consensus_12946#1 TTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCC 329 ************************************************************ consensus_12946#0 AAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAAC 660 consensus_12946#1 AAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAAC 389 ************************************************************ consensus_12946#0 AAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGA 720 consensus_12946#1 AAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGA 449 ************************************************************ consensus_12946#0 TCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGA 780 consensus_12946#1 TCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGA 509 ************************************************************ consensus_12946#0 GGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAAT 840 consensus_12946#1 GGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAAT 569 ************************************************************ consensus_12946#0 TCTGCATAAAAATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGC 900 consensus_12946#1 TCTGCATAAATATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGC 629 ********** ************************************************* consensus_12946#0 GCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTAT 960 consensus_12946#1 GCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTAT 689 ************************************************************ consensus_12946#0 GTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATC 1020 consensus_12946#1 GTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATC 749 ************************************************************ consensus_12946#0 GTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCC 1080 consensus_12946#1 GTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCC 809 ************************************************************ consensus_12946#0 TGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGT 1140 consensus_12946#1 TGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGT 869 ************************************************************ consensus_12946#0 GCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACC 1200 consensus_12946#1 GCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACC 929 ************************************************************ consensus_12946#0 TGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAA 1260 consensus_12946#1 TGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAA 989 ************************************************************ consensus_12946#0 TTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGC 1320 consensus_12946#1 TTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGC 1049 ************************************************************ consensus_12946#0 AGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGC 1380 consensus_12946#1 AGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGC 1109 ************************************************************ consensus_12946#0 TGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTC 1440 consensus_12946#1 TGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTC 1169 ************************************************************ consensus_12946#0 TACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCA 1500 consensus_12946#1 TACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCA 1229 ************************************************************ consensus_12946#0 ACACCTAGAATTACAAAGTACTGGTGATCCATCTCAAGTTTTGACTGCACATGCAACTGA 1560 consensus_12946#1 ACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGA 1289 ************************** ********************************* consensus_12946#0 ACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGT 1620 consensus_12946#1 ACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGT 1349 ************************************************************ consensus_12946#0 GCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAA 1680 consensus_12946#1 GCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAA 1409 ************************************************************ consensus_12946#0 AATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGA 1740 consensus_12946#1 AATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGA 1469 ************************************************************ consensus_12946#0 GGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGA 1800 consensus_12946#1 GGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGA 1529 ************************************************************ consensus_12946#0 TGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGT 1860 consensus_12946#1 TGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGT 1589 ************************************************************ consensus_12946#0 GGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAA 1920 consensus_12946#1 GGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAA 1649 ************************************************************ consensus_12946#0 AAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCC 1980 consensus_12946#1 AAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCC 1709 ************************************************************ consensus_12946#0 AGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGT 2040 consensus_12946#1 AGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGT 1769 ************************************************************ consensus_12946#0 TGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCA 2100 consensus_12946#1 TGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCA 1829 ************************************************************ consensus_12946#0 AAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAA 2160 consensus_12946#1 AAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAA 1889 ************************************************************ consensus_12946#0 TGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGC 2220 consensus_12946#1 TGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGC 1949 ************************************************************ consensus_12946#0 TAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTAT 2280 consensus_12946#1 TAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTAT 2009 ************************************************************ consensus_12946#0 AATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGT 2340 consensus_12946#1 AATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGT 2069 ************************************************************ consensus_12946#0 AGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAA 2400 consensus_12946#1 AGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCCCAATTCCTTTCTGAACCAAA 2129 *************************************** ******************** consensus_12946#0 GCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTCTCTGT 2460 consensus_12946#1 GCACTGGTGAAAACATTAGGTTAGACTGGATACCCCGTTTTAAAAAAAAAAAA------- 2182 ********************************* ****** * consensus_12946#0 GATGTCTTAGACTGATATGTTCCATTTGTTAAGCTGGCCTGAGATTATCATGCCGCCTTC 2520 consensus_12946#1 ------------------------------------------------------------ consensus_12946#0 CTGTACAGCCTCGCCTCTTTCTCCGTTGGATAGTTTGGTTGATTGGCCAAATATTCAGAA 2580 consensus_12946#1 ------------------------------------------------------------ consensus_12946#0 ACTATGTCATTGTGGCCTGA 2600 consensus_12946#1 -------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||