These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12951#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1469 fasta sequence [GGCCGCCGCTGCCAGACTCGTCTCCACCACTCTCGCGCGCTCCTCCTCCTCCCTCGCCGCCGCCGCGCGCCGCCCCGACCTTCTCGCCTCCTCGCCGCGTGGTTTTTCAAGCATGGCAGATTCAATTCAAAGGAGCGGCTCTGGCGATATTACGCGGGTTTTATTCTGTGGACCTTATTGGCCTGCTTCTACCAGCTTCACCAAGGAGTATTTGCAGAGCTATCCATTTATTCAGGTTGATGAAGTAGGTCTAGAGGAGGTACCTGATGTTATTCAAAATTACCACTTATGTGTAGTGAAAAATCGACGTCTAGACTCAGATACCATTGCCAAGGCAAGTCAGATGAAGATCATTATGCAATATGGTGTTGGATTAGAAGGTGTCGATGTAAATGCTGCTACAGAACACAAGATTAAAGTTGCACGGATACCTGGGAGTACAACAGGAAATGCAGTCTCTTGTGCAGAAATGGCAATCTATCTTACTCTGGGTGTCCTAAGGAAGCAAAAGGTGATGGATACTGCTGTGAAACGTAAGGACCTGGGCATTCCAGTTGGAGATACAATATTTGGAAAATCAGTCCTTATCTTGGGATTTGGAGCCATTGGAGTAGAAATTGCCAAGAGGCTAAGACCCTTTGGAGTAAAAATTCTTGCTACCAAACGAAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTAGCGGCCGCGAATTCGCGGCCGCTCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACAGCGG] [+] EMBL AK065209 [GGCCGCCGCTGCCAGACTCGTCTCCACCACTCTCGCGCGCTCCTCCTCCTCCCTCGCCGCCGCCGCGCGCCGCCCCGACCTTCTCGCCTCCTCGCCGCGTGGTTTTTCAAGCATGGCAGATTCAATTCAAAGGAGCGGCTCTGGCGATATTACGCGGGTTTTATTCTGTGGACCTTATTGGCCTGCTTCTACCAGCTTCACCAAGGAGTATTTGCAGAGCTATCCATTTATTCAGGTTGATGAAGTAGGTCTAGAGGAGGTACCTGATGTTATTCAAAATTACCACTTATGTGTAGTGAAAAATCGACGTCTAGACTCAGATACCATTGCCAAGGCAAGTCAGATGAAGATCATTATGCAATATGGTGTTGGATTAGAAGGTGTCGATGTAAATGCTGCTACAGAACACAAGATTAAAGTTGCACGGATACCTGGGAGTACAACAGGAAATGCAGTCTCTTGTGCAGAAATGGCAATCTATCTTACTCTGGGTGTCCTAAGGAAGCAAAAGGTGATGGATACTGCTGTGAAACGTAAGGACCTGGGCATTCCAGTTGGAGATACAATATTTGGAAAATCAGTCCTTATCTTGGGATTTGGAGCCATTGGAGTAGAAATTGCCAAGAGGCTAAGACCCTTTGGAGTAAAAATTCTTGCTACCAAACGAAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTA ] [+] EMBL AK104725 [ GCTGCCAGACTCGTCTCCACCACTCTCGCGCGCTCCTCCTCCTCCCTCGCCGCCGCCGCGCGCCGCCCCGACCTTCTCGCCTCCTCGCCGCGTGGTTTTTCAAGCATGGCAGATTCAATTCAAAGGAGCGGCTCTGGCGATATTACGCGGGTTTTATTCTGTGGACCTTATTGGCCTGCTTCTACCAGCTTCACCAAGGAGTATTTGCAGAGCTATCCATTTATTCAGGTTGATGAAGTAGGTCTAGAGGAGGTACCTGATGTTATTCAAAATTACCACTTATGTGTAGTGAAAAATCGACGTCTAGACTCAGATACCATTGCCAAGGCAAGTCAGATGAAGATCATTATGCAATATGGTGTTGGATTAGAAGGTGTCGATGTAAATGCTGCTACAGAACACAAGATTAAAGTTGCACGGATACCTGGGAGTACAACAGGAAATGCAGTCTCTTGTGCAGAAATGGCAATCTATCTTACTCTGGGTGTCCTAAGGAAGCAAAAGGTGATGGATACTGCTGTGAAACGTAAGGACCTGGGCATTCCAGTTGGAGATACAATATTTGGAAAATCAGTCCTTATCTTGGGATTTGGAGCCATTGGAGTAGAAATTGCCAAGAGGCTAAGACCCTTTGGAGTAAAAATTCTTGCTACCAAACGAAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGAT ] [+] EMBL AK104560 [ GCTGCCAGACTCGTCTCCACCACTCTCGCGCGCTCCTCCTCCTCCCTCGCCGCCGCCGCGCGCCGCCCCGACCTTCTCGCCTCCTCGCCGCGTGGTTTTTCAAGCATGGCAGATTCAATTCAAAGGAGCGGCTCTGGCGATATTACGCGGGTTTTATTCTGTGGACCTTATTGGCCTGCTTCTACCAGCTTCACCAAGGAGTATTTGCAGAGCTATCCATTTATTCAGGTTGATGAAGTAGGTCTAGAGGAGGTACCTGATGTTATTCAAAATTACCACTTATGTGTAGTGAAAAATCGACGTCTAGACTCAGATACCATTGCCAAGGCAAGTCAGATGAAGATCATTATGCAATATGGTGTTGGATTAGAAGGTGTCGATGTAAATGCTGCTACAGAACACAAGATTAAAGTTGCACGGATACCTGGGAGTACAACAGGAAATGCAGTCTCTTGTGCAGAAATGGCAATCTATCTTACTCTGGGTGTCCTAAGGAAGCAAAAGGTGATGGATACTGCTGTGAAACGTAAGGACCTGGGCATTCCAGTTGGAGATACAATATTTGGAAAATCAGTCCTTATCTTGGGATTTGGAGCCATTGGAGTAGAAATTGCCAAGAGGCTAAGACCCTTTGGAGTAAAAATTCTTGCTACCAAACGAAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGAT ] [+] EMBL OSR15861A [ TCCTCCTCCCTCGCCGNCGCCGCGCGCCGCCCCGACCTTCTCGCCTCCTCGCCGCGTGGTTTTTCAAGCATGGCAGATTCAATTCAAAGGAGCGGNTCTGGCGATATTACGCGGGTTTTATTCTGTGGACCTTATTGGCCTGCTTCTACCAGNTTCACCAAGGAGTATTTGCAGAGCTATCCATTTATTCAGGTTGATGAAGTAGGTCTAGAGGAGGTACCTGATGTTATTCAAAATTACCACTTATGTGTAGTGAAAAATCGACGTCTAGACTCAGATACCATTGCCAAGGCAAGTCAGNTGNAGATCATTATGCAATATGGTGTTGGATTAGAAGGTGTCG ] [+] EMBL AU225309 [ gccgctGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTAGCGGCCGCGAATTCGCGGCCGCTCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACAGCGG] [+] EMBL AU225352 [ gccgctGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTAGCGGCCGCGAATTCGCGGCCGCTCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACAGCGG] consensusID : consensus_12951#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence [CTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGANTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCACCATGCCATTTTGTTCTTATGCTTGAACGCGCCTCTATCCAAAAAAAAAAAAAA] [+] EMBL AU088720 [CTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGANTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCACCATGCCATTTTGTTCTTATGCTTGAACGCGCCTCTATCCAAAAAAAAAAAAAA] consensusID : consensus_12951#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence [AAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATGATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATCTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGATGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCGCCATGCCATTTTGTTTTTAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762108 [AAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAAAGGTGGACCAGAAGATATGTATGAATTTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATGATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATCTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGATGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCGCCATGCCATTTTGTTTTTAAAAAAAAAAAAAAAAAAA] consensusID : consensus_12951#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 666 fasta sequence [ACCAGAAAGATATGTATGAATNTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATGATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGATGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCACCATGCCATTTTGTTTTTATGCTTGAACGCGCCTCTATCCATATTTGAACTTAGCCCGGTCTTCAAAAAAAAAAAAAA] [-] EMBL CA762107 [ACCAGAAAGATATGTATGAATNTGCTGGAGAGGCTGACATAGTTATAACATGCTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATGATAAGTTCCTCTCTGCAATGAAAAAGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATGTTGCTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGATGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCACCATGCCATTTTGTTTTTATGCTTGAACGCGCCTCTATCCATATTTGAACTTAGCCCGGTCTTCAAAAAAAAAAAAAA] [+] EMBL AU173174 [ CTTGGACGGAACCATATGATCCAGAGGATCCAATTCTGAAGTTCTCAAATGTTATTATAACCCCACATATTGCTGGAGTCACGGAATACTCTTACAGGACGATGGCAAAGGTTGTTGGTGGTGTTGCCCTGAAGCTTCATTCAGGGGAGCCAATCACTGAAGTGGAATTTGTGAACTAAGCTCAGGAAATGCGTGGCACAGATGTGCCATTATTATGGATTGATTCAAAAAGATCAAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAATAATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCACCATGCCATTTTGTTNTTATGCTTGAACGCGCCTCTATCCATATTTGAACTTAaaaaaaaa ] consensusID : consensus_12951#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence [ANTAAGGAATTGTCGATAAGAAGGGACCAGAGATATGTATGATTTGCTGGAAGAGGCTGACATAGTTATAACATGGCTGGCTATTGACAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGCCATTTAGGTGGTTTGGCATTGATGGTTGCTTGGACGGAACCATATGATCCAGAGGGATCCAAATTCTGAAGTTTCTCAAAATGTTTATTATAACCCCCAACAATTAATTGCTGGGAGTCACGGAATACTCTTACACGGACGATGCACAAGTTTTTTGGTGTTTTGCCCCTGGAAGCTTTCCATTTCAGGGGACCCACAATCACTGAAGTGGGAAATTTGTGAACCTTAAGCTCAAGGAAATGCCGTGGGCACAGATGTCCCATTATTATGGATTGATTCCCAAAAAGATCCAAAAATAGTTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGTGAATAATTGATCATTGAATCGCCTATCTTCAAGATATAATAATAAGATGGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCACCCATCCATTTTGTTCTAAAAAAAAAA] [+] EMBL BI806234 [ANTAAGGAATTGTCGATAAGAAGGGACCAGAGATATGTATGATTTGCTGGAAGAGGCTGACATAGTTATAACATGGCTGGCTATTGACAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAAAAAGGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGTTTAATCACCTGAAATCAGCCATTTAGGTGGTTTGGCATTGATGGTTGCTTGGACGGAACCATATGATCCAGAGGGATCCAAATTCTGAAGTTTCTCAAAATGTTTATTATAACCCCCAACAATTAATTGCTGGGAGTCACGGAATACTCTTACACGGACGATGCACAAGTTTTTTGGTGTTTTGCCCCTGGAAGCTTTCCATTTCAGGGGACCCACAATCACTGAAGTGGGAAATTTGTGAACCTTAAGCTCAAGGAAATGCCGTGGGCACAGATGTCCCATTATTATGGATTGATTCCCAAAAAGATCCAAAAATAGTTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGTGAATAATTGATCATTGAATCGCCTATCTTCAAGATATAATAATAAGATGGTTGCTCTGTAATTTGTTATGGTACTGATAATTCATCCACCCATCCATTTTGTTCTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 GGCCGCCGCTGCCAGACTCGTCTCCACCACTCTCGCGCGCTCCTCCTCCTCCCTCGCCGC 60 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 CGCCGCGCGCCGCCCCGACCTTCTCGCCTCCTCGCCGCGTGGTTTTTCAAGCATGGCAGA 120 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 TTCAATTCAAAGGAGCGGCTCTGGCGATATTACGCGGGTTTTATTCTGTGGACCTTATTG 180 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 GCCTGCTTCTACCAGCTTCACCAAGGAGTATTTGCAGAGCTATCCATTTATTCAGGTTGA 240 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 TGAAGTAGGTCTAGAGGAGGTACCTGATGTTATTCAAAATTACCACTTATGTGTAGTGAA 300 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 AAATCGACGTCTAGACTCAGATACCATTGCCAAGGCAAGTCAGATGAAGATCATTATGCA 360 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 ATATGGTGTTGGATTAGAAGGTGTCGATGTAAATGCTGCTACAGAACACAAGATTAAAGT 420 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 TGCACGGATACCTGGGAGTACAACAGGAAATGCAGTCTCTTGTGCAGAAATGGCAATCTA 480 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 TCTTACTCTGGGTGTCCTAAGGAAGCAAAAGGTGATGGATACTGCTGTGAAACGTAAGGA 540 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 CCTGGGCATTCCAGTTGGAGATACAATATTTGGAAAATCAGTCCTTATCTTGGGATTTGG 600 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 AGCCATTGGAGTAGAAATTGCCAAGAGGCTAAGACCCTTTGGAGTAAAAATTCTTGCTAC 660 consensus_12951#1 -----------------CTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAA 43 consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 -----------------------------------------ANTAAGGAATTGTCGATAA 19 consensus_12951#2 ------AAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAA 54 consensus_12951#0 CAAACGAAATTGGTCATCTGATACATTGCCATGTGATATAGATGAATTGGTCGATAAGAA 720 consensus_12951#1 AGGTGGACCAGAA-GATATGTATGAATTTGCTGGA-GAGGCTGACATAGTTATAACATG- 100 consensus_12951#3 ------ACCAGAAAGATATGTATGAATNTGCTGGA-GAGGCTGACATAGTTATAACATG- 52 consensus_12951#4 GAAGGGACCAGAG--ATATGTATGA-TTTGCTGGAAGAGGCTGACATAGTTATAACATGG 76 consensus_12951#2 AGGTGGACCAGAA-GATATGTATGAATTTGCTGGA-GAGGCTGACATAGTTATAACATG- 111 consensus_12951#0 AGGTGGACCAGAA-GATATGTATGAATTTGCTGGA-GAGGCTGACATAGTTATAACATG- 777 ****** ********** * ******* *********************** consensus_12951#1 CTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAA 160 consensus_12951#3 CTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATGATAAGTTCCTCTCTGCAATGAA 112 consensus_12951#4 CTGGCTATTGACAA-TGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAA 135 consensus_12951#2 CTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATGATAAGTTCCTCTCTGCAATGAA 171 consensus_12951#0 CTTGCTATTGACAAATGAAACAGTTGGAATTGTGGATCATAAGTTCCTCTCTGCAATGAA 837 ** *********** ********************** ********************** consensus_12951#1 AAAGGG-ATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGANTACGACGCTGTGT 219 consensus_12951#3 AAAGGG-ATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGT 171 consensus_12951#4 AAAGGGGATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGT 195 consensus_12951#2 AAAGGG-ATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGT 230 consensus_12951#0 AAAGGG-ATCATATCTGGTCAATATTGCTAGAGGACGTCTACTGGACTACGACGCTGTGT 896 ****** *************************************** ************* consensus_12951#1 TTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATG-TTGCTTGGACGGAA 278 consensus_12951#3 TTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATG-TTGCTTGGACGGAA 230 consensus_12951#4 TTAATCACCTGAAATCAG-CCATTTAGGTGGTTTGG-CATTGATGGTTGCTTGGACGGAA 253 consensus_12951#2 TTAATCACCTGAAATCAGGCCATCTAGGTGGTTTGGGCATTGATG-TTGCTTGGACGGAA 289 consensus_12951#0 TTAATCACCTGAAATCAGGCCATTTAGGTGGTTTGGGCATTGATG-TTGCTTGGACGGAA 955 ****************** **** ************ ******** ************** consensus_12951#1 CCATATGATCCAGAGG-ATCCAA-TTCTGAAGTTCTC--AAATGTT-ATTATAACCCCAC 333 consensus_12951#3 CCATATGATCCAGAGG-ATCCAA-TTCTGAAGTTCTC--AAATGTT-ATTATAACCCCAC 285 consensus_12951#4 CCATATGATCCAGAGGGATCCAAATTCTGAAGTTTCTCAAAATGTTTATTATAACCCCCA 313 consensus_12951#2 CCATATGATCCAGAGG-ATCCAA-TTCTGAAGTTCTC--AAATGTT-ATTATAACCCCAC 344 consensus_12951#0 CCATATGATCCAGAGG-ATCCAA-TTCTGAAGTTCTC--AAATGTT-ATTATAACCCCAC 1010 **************** ****** ********** ******* *********** consensus_12951#1 ATA-----TTGCTGG-AGTCACGGAATACTCTTACA-GGACGATGGCAAAGGTTGTTGGT 386 consensus_12951#3 ATA-----TTGCTGG-AGTCACGGAATACTCTTACA-GGACGATGGCAAAGGTTGTTGGT 338 consensus_12951#4 ACAATTAATTGCTGGGAGTCACGGAATACTCTTACACGGACGATGCACAAGTTTTTTGGT 373 consensus_12951#2 ATA-----TTGCTGG-AGTCACGGAATACTCTTACA-GGACGATGGCAAAGGTTGTTGGT 397 consensus_12951#0 ATA-----TTGCTGG-AGTCACGGAATACTCTTACA-GGACGATGGCAAAGGTTGTTGGT 1063 * * ******* ******************** ******** *** ** ***** consensus_12951#1 GGTGTTGCCCTG-AAGCTTCA---TTCAGGGGAGCCA--ATCACTGAAGTGG--AATTTG 438 consensus_12951#3 GATGTTGCCCTG-AAGCTTCA---TTCAGGGGAGCCA--ATCACTGAAGTGG--AATTTG 390 consensus_12951#4 GTTTTGCCCCTGGAAGCTTTCCATTTCAGGGGACCCACAATCACTGAAGTGGGAAATTTG 433 consensus_12951#2 GATGTTGCCCTG-AAGCTTCA---TTCAGGGGAGCCA--ATCACTGAAGTGG--AATTTG 449 consensus_12951#0 GGTGTTGCCCTG-AAGCTTCA---TTCAGGGGAGCCA--ATCACTGAAGTGG--AATTTG 1115 * * * ***** ****** ********* *** ************* ****** consensus_12951#1 TGAAC--TAAGCTCA-GGAAATGC-GTGG-CACAGATGTGCCATTATTATGGATTGATTC 493 consensus_12951#3 TGAAC--TAAGCTCA-GGAAATGC-GTGG-CACAGATGTGCCATTATTATGGATTGATTC 445 consensus_12951#4 TGAACCTTAAGCTCAAGGAAATGCCGTGGGCACAGATGTCCCATTATTATGGATTGATTC 493 consensus_12951#2 TGAAC--TAAGCTCA-GGAAATGC-GTGG-CACAGATGTGCCATTATTATGGATTGATTC 504 consensus_12951#0 TGAAC--TAAGCTCA-GGAAATGC-GTGG-CACAGATGTGCCATTATTATGGATTGATTC 1170 ***** ******** ******** **** ********* ******************** consensus_12951#1 --AAAAAGATC-AAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAAT 550 consensus_12951#3 --AAAAAGATC-AAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAAT 502 consensus_12951#4 CCAAAAAGATCCAAAAATAGTTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAG-TGAAT 552 consensus_12951#2 --AAAAAGATC-AAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAAT 561 consensus_12951#0 --AAAAAGATC-AAAAATAGGTTTGTTGTAGTGTCAAAATTGCTTTGCCCCTAGGTGAAT 1227 ********* ******** ********************************* ***** consensus_12951#1 AATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATG-TTGCTCTGTAA 609 consensus_12951#3 AATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATG-TTGCTCTGTAA 561 consensus_12951#4 AATTGATCATTGAATCGCCTATCTTC---AAGATATAATAATAAGATGGTTGCTCTGTAA 609 consensus_12951#2 AATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATG-TTGCTCTGTAA 620 consensus_12951#0 AATTGATCATTGAATCGCCTATCCTTGCAAGGATATAATAATAAGATG-TTGCTCTGTAA 1286 *********************** * * ***************** *********** consensus_12951#1 TTTGTTATG---GTACTGATAATTCATCC--ACCATGCCATTTTGTTCTTATGCTTGAAC 664 consensus_12951#3 TTTGTTATG---GTACTGATAATTCATCC--ACCATGCCATTTTGTTTTTATGCTTGAAC 616 consensus_12951#4 TTTGTTATG---GTACTGATAATTCATCC--ACCCATCCATTTTGTTCTAAAAAAAAAA- 663 consensus_12951#2 TTTGTTATG---GTACTGATAATTCATCC--GCCATGCCATTTTGTTTTTAAAAAAAAAA 675 consensus_12951#0 TTTAGCGGCCGCGAATTCGCGGCCGCTCGGAACCCAAAGACTTTGATTTCTCATAAGGTG 1346 *** * * * ** ** * **** * * consensus_12951#1 GCGCCTCTATCCAAAAAAAAAAAAAA---------------------------------- 690 consensus_12951#3 GCGCCTCTATCCATATTTGAACTTAGCCCGGTCTTCAAAAAAAAAAAAAA---------- 666 consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 AAAAAAAAA--------------------------------------------------- 684 consensus_12951#0 CCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGA 1406 consensus_12951#1 ------------------------------------------------------------ consensus_12951#3 ------------------------------------------------------------ consensus_12951#4 ------------------------------------------------------------ consensus_12951#2 ------------------------------------------------------------ consensus_12951#0 CTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACAG 1466 consensus_12951#1 --- consensus_12951#3 --- consensus_12951#4 --- consensus_12951#2 --- consensus_12951#0 CGG 1469 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||