These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12962#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1613 fasta sequence [CCGTTCGCTCTCCCTCCTCCTCCTCCTCGTCTCCGCCGATCGAAGGAAAACAAAAAGCTAGGGTTTAGCTGCCTCTCTCGCTCGCCATCGCTCGCGGCGACTCGCTGCTAGGGTTTTTGGGTCTCTCTCTCTCTCTCCACCGGCGATGGATGCGGCGGCGCTCGACGACTTGATCCGGCGGCTCCTGGACGCCCGCGGCGGCCGCACGGCGCGCCCCGCGCAGCTC-GCCGACGCGGAGATCCGCAAGCTCTGCGCCGCCGCCAAGGACGTCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAAAATCTGCGGAGATATCCATGGCCAGTATTCTGATCTTCTTCGGTTATTTGAGTATGGGGGCTTCCCACCAGAGGCAAACTACTTGTTTCTAGGTGATTATGTTGACCGTGGGAAACAGAGTATAGAAACTATATGTCTTCTCCTTGCGTATAAGATTAAGTACCCAGAGAACTTCTTCCTCCTTAGGGGAAACCATGAGTGCGCATCTATCAACCGAATCTACGGATTCTTTGATGAATGCAAAAGGAGGTTTAATGTTCGTATTTGGAAGGTTTTTACTGATTGTTTCAACTGCCTCCCTGTGGCTGCACTTATTGATGACAAGATCCTATGCATGCATGGGGGTTTATCTCCTGACCTAAAGAACATGGACCAGATTCGCAACATTGCCCGCCCAGTTGATGTTCCAGACCAT-GGTCTCCTGTGTGATCTG-TTGTGGTCAGACCCAGATAAAGAAATCGAAGGTTGGGGTGAGAATGACAGGGGTGTATCATACACTTTTGGAGCTGATAAGGTCGCTGAGTTTCTCCAGACACATGATCTAGATCTGATCTGCAGGGCTCACCAGGTTGTGGAGGATGGCTATGAATTCTTTGCTAAGCGCCAGCTTGTAACCATATTCTCTGCACCCAACTATTGTGGCGAGTTTGACAATGCGGGGGCGATGATGAGCATTGATGATTCTCTTACATGCTCATTCCAG-AT-CCTTAAGCCTTCTGATAAGAAAGGA-AAAGCAGGAAC-CGGAAATATGTCAAAACCTGGAACTCCACCAAGGAAGATAAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGAACTGAGAAATTGTGATGGAGTACTCCTCCAAACTTGTTATTGGAAGATTTTTGGTGCGCATGACACTGTTGAAAAATGTCGACCTGCGTACCTTTGTGTTTTCACTGTCTGATGCAAATCTGTCCTGCCGTTATTCCTGCTGAAAAGAAGATCATACTTCGGCTGTTCGGCAAAAACCATACTTGGAAGCCTTCTTTAACATGGATTACTTATTTCTTCTTGATCTGCTACATAAGTCAGAAACCAGAATATCTGTCAATGGGTAGGCATAGGGAAACTACTAGTCTCATGTAGATTTTGTTCAATGCTGTATGCCATTCACCTGTAAAGTGTGCCTTTGAAAGGGACTGACTGATTAGCTGAAGTCTTTTACTGATGCTGATTG-CATAGAATGGTAACTTTTTACCCAGCAGCTGATAGTTAAGTGTCTTTATCTATGTGATAGGTGCTTTGTCATTGCCATTTTAAACAAGCATTTT] [+] EMBL AK064345 [CCGTTCGCTCTCCCTCCTCCTCCTCCTCGTCTCCGCCGATCGAAGGAAAACAAAAAGCTAGGGTTTAGCTGCCTCTCTCGCTCGCCATCGCTCGCGGCGACTCGCTGCTAGGGTTTTTGGGTCTCTCTCTCTCTCTCCACCGGCGATGGATGCGGCGGCGCTCGACGACTTGATCCGGCGGCTCCTGGACGCCCGCGGCGGCCGCACGGCGCGCCCCGCGCAGCTC GCCGACGCGGAGATCCGCAAGCTCTGCGCCGCCGCCAAGGACGTCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAAAATCTGCGGAGATATCCATGGCCAGTATTCTGATCTTCTTCGGTTATTTGAGTATGGGGGCTTCCCACCAGAGGCAAACTACTTGTTTCTAGGTGATTATGTTGACCGTGGGAAACAGAGTATAGAAACTATATGTCTTCTCCTTGCGTATAAGATTAAGTACCCAGAGAACTTCTTCCTCCTTAGGGGAAACCATGAGTGCGCATCTATCAACCGAATCTACGGATTCTTTGATGAATGCAAAAGGAGGTTTAATGTTCGTATTTGGAAGGTTTTTACTGATTGTTTCAACTGCCTCCCTGTGGCTGCACTTATTGATGACAAGATCCTATGCATGCATGGGGGTTTATCTCCTGACCTAAAGAACATGGACCAGATTCGCAACATTGCCCGCCCAGTTGATGTTCCAGACCAT GGTCTCCTGTGTGATCTG TTGTGGTCAGACCCAGATAAAGAAATCGAAGGTTGGGGTGAGAATGACAGGGGTGTATCATACACTTTTGGAGCTGATAAGGTCGCTGAGTTTCTCCAGACACATGATCTAGATCTGATCTGCAGGGCTCACCAGGTTGTGGAGGATGGCTATGAATTCTTTGCTAAGCGCCAGCTTGTAACCATATTCTCTGCACCCAACTATTGTGGCGAGTTTGACAATGCGGGGGCGATGATGAGCATTGATGATTCTCTTACATGCTCATTCCAG AT CCTTAAGCCTTCTGATAAGAAAGGA AAAGCAGGAAC CGGAAATATGTCAAAACCTGGAACTCCACCAAGGAAGATAAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGAACTGAGAAATTGTGATGGAGTACTCCTCCAAACTTGTTATTGGAAGATTTTTGGTGCGCATGACACTGTTGAAAAATGTCGACCTGCGTACCTTTGTGTTTTCACTGTCTGATGCAAATCTGTCCTGCCGTTATTCCTGCTGAAAAGAAGATCATACTTCGGCTGTTCGGCAAAAACCATACTTGGAAGCCTTCTTTAACATGGATTACTTATTTCTTCTTGATCTGCTACATAAGTCAGAAACCAGAATATCTGTCAATGGGTAGGCATAGGGAAACTACTAGTCTCATGTAGATTTTGTTCAATGCTGTATGCCATTCACCTGTAAAGTGTGCCTTTGAAAGGGACTGACTGATTAGCTGAAGTCTTTTACTGATGCTGATTG CATAGAATGGTAACTTTTTACCCAGCAGCTGATAGTTAAGTGTCTTTATCTATGTGATAGGTGCTTTGTCATTGCCATTTTAAACAAGCATTT ] [+] EMBL AK102278 [CCGTTCGCTCTCCCTCCTCCTCCTCCTCGTCTCCGCCGATCGAAGGAAAACAAAAAGCTAGGGTTTAGCTGCCTCTCTCGCTCGCCATCGCTCGCGGCGACTCGCTGCTAGGGTTTTTGGGTCTCTCTCTCTCTCTCCACCGGCGATGGATGCGGCGGCGCTCGACGACTTGATCCGGCGGCTCCTGGACGCCCGCGGCGGCCGCACGGCGCGCCCCGCGCAGCTC GCCGACGCGGAGATCCGCAAGCTCTGCGCCGCCGCCAAGGACGTCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAAAATCTGCGGAGATATCCATGGCCAGTATTCTGATCTTCTTCGGTTATTTGAGTATGGGGGCTTCCCACCAGAGGCAAACTACTTGTTTCTAGGTGATTATGTTGACCGTGGGAAACAGAGTATAGAAACTATATGTCTTCTCCTTGCGTATAAGATTAAGTACCCAGAGAACTTCTTCCTCCTTAGGGGAAACCATGAGTGCGCATCTATCAACCGAATCTACGGATTCTTTGATGAATGCAAAAGGAGGTTTAATGTTCGTATTTGGAAGGTTTTTACTGATTGTTTCAACTGCCTCCCTGTGGCTGCACTTATTGATGACAAGATCCTATGCATGCATGGGGGTTTATCTCCTGACCTAAAGAACATGGACCAGATTCGCAACATTGCCCGCCCAGTTGATGTTCCAGACCAT GGTCTCCTGTGTGATCTG TTGTGGTCAGACCCAGATAAAGAAATCGAAGGTTGGGGTGAGAATGACAGGGGTGTATCATACACTTTTGGAGCTGATAAGGTCGCTGAGTTTCTCCAGACACATGATCTAGATCTGATCTGCAGGGCTCACCAGGTTGTGGAGGATGGCTATGAATTCTTTGCTAAGCGCCAGCTTGTAACCATATTCTCTGCACCCAACTATTGTGGCGAGTTTGACAATGCGGGGGCGATGATGAGCATTGATGATTCTCTTACATGCTCATTCCAG AT CCTTAAGCCTTCTGATAAGAAAGGA AAAGCAGGAAC CGGAAATATGTCAAAACCTGGAACTCCACCAAGGAAGATAAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGAACTGAGAAATTGTGATGGAGTACTCCTCCAAACTTGTTATTGGAAGATTTTTGGTGCGCATGACACTGTTGAAAAATGTCGACCTGCGTACCTTTGTGTTTTCACTGTCTGATGCAAATCTGTCCTGCCGTTATTCCTGCTGAAAAGAAGATCATACTTCGGCTGTTCGGCAAAAACCATACTTGGAAGCCTTCTTTAACATGGATTACTTATTTCTTCTTGATCTGCTACATAAGTCAGAAACCAGAATATCTGTCAATGGGTAGGCATAGGGAAACTACTAGTCTCATGTAGATTTTGTTCAATGCTGTATGCCATTCACCTGTAAAGTGTGCCTTTGAAAGGGACTGACTGATTAGCTGAAGTCTTTTACTGATGCTGATTG CATAGAATGGTAACTTTTTAC ] [+] EMBL CB619986 [ CCTCCTCCTTGACACCGCCGATCGAAGGAAAAAAAAAAGCTAGGGTTTAGCTGCCTCTCTCGCTCGCCATCGCTCGCGGCGACTCGCTGCTAGGGTTTTTGGG TCTCTCTCTCTCTCCACCGGCGATGGATGCGGCGGCGCTCGACGACTTGATCCGGCGGCTCCTGGACGCCCGCGGCGGCCGCACGGCGCGCCCCGCGCAGCTC GCCGACGCGGAGATCCGCAAGCTCTGCGCCGCCGCCAAGGACGTCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAAATTCTGCGGAGATATCCATGGCCAGTATTCTGATCTTCTTCGGTTATTTGAGTATGGGGGCTTCCCACCAGAGGCAAACTACTTGTTTCTAGGTGATTATGTTGACCGTGGGAAACAGAGTATAGAAACTATATGTCTTCTCCTTGCGTATAAGATTAAGTACCCAGAGAACTTCTTCCTCCTTAGGGGAAACCATGAGTGCGCATCTATCAACCGAATCTACGGATTCTTTGATGAATGCAAAAGGAGGTTTAATGTTCGTATTTGGAAGGTTTTTACTGATTGTTTCAACTGCCTCCCTGTGGCTGCACTTATTGATGACAAGATCCTATGCATGCATGGGGGTTTATCTCCTGACCTAAAGAACATGGACCAGATTCTCAACATTGCCCGCCCAGTTGATGTTCCAGACCATGGGTCTCCTGTGTGATCTG TTGTGGTCAGACCCA ] [-] EMBL AU161643 [ CCGC CAGCTCGGCCGACGCGGAGATCCGCAAGCTCTGCGCCGCCGCCAAGGACGTCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAAAATCTGCGGAGATATCCATGGCCAGTATTCTGATCTTCTTCGGTTATTTGAGTATGGGGGCTTCCCACCAGAGGCAAACTACTTGTTTCTAGGTGATTATGTTGACCGTGGGAAACAGAGTATAGAAACTATATGTCTTCTCCTTGCGTATAAGATTAAGTACCCAGAGAACTTCTTCCTCCTTAGGGGAAACCATGAGTGCGCATCTATCAACCGAATCTACGGATTCTTTGATGAATGCAAAAGGAGGTTTAATGTTCGTATTTGGAAGGTTTTTACTGATTGTTTCAACTGCCTCCCTGTGGCTGCACTTATTGATGACAAGATCCTATGCATGCATGGGGGTTTATCTCCTGACCTAAAGAACATGGACCAGATTCGCAACATTGCCCGCCCAGTTGATGTTCCAGACCAT GGTCTCCTGTGTGATCTGTTTGTGGTCAGACCCAGATAAAGAAATC ] [-] EMBL CF326708 [ AGCTTGTAACCATATTCTCTGCACCCAACTATTGTGGCGAGTTTGACAATGCGGGGGCGATGATGAGCATTGATGATTCTCTTACATGCTCATTCCAG AT CCTTAAGCCTTCTGATAAGAAAGGA AAAGCAGGAAC CGGAAATATGTCAAAACCTGGAACTCCACCAAGGAAGATAAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGAACTGAGAAATTGTGATGGAGTACTCCTCCAAACTTGTTATTGGAAGATTTTTGGTGCGCATGACACTGTTGAAAAATGTCGACCTGCGTACCTTTGTGTTTTCACTGTCTGATGCAAATCTGTCCTGCCGTTATTCCTGCTGAAAAGAAGATCATACTTCGGCTGTTCGGCAAAAACCATACTTGGAAGCCTTCTTTAACATGGATTACTTATTTCTTCTTGATCTGCTACATAAGTCAGAAACCAGAATATCTGTCAATGGGTAGGCATAGGGAAACTACTAGTCTCATGTAGATTTTGTTCAATGCTGTATGCCATTCACCTGTAAAGTGTGCCTATGAAAGGGACTGACTGATTAGCTGAAGTCTTTTACTGATGCTGATTG CATAGAATGGTAACTTTTTACCCAGCAGCTGATAGTTAAGTGTCTTTATCTATGTGATAGGTGCTTTGTCATTGCCATTTTAAACAAGCATTTT] [+] EMBL BM421869 [ aCATTGATGATTCTCTTACATGCTCATTCCAGTATCCCTTAAGCCTTCTGATAAGAAAGGAGAAAGCAGGAACGCGGAAATATGTCAAAACCTGGAACTCCACCAAGGAAGATAAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGAACTGAGAAATTGTGATGGAGTACTCCTCC AACTTGTTATTGGAAGATTTTTGGTGCGCATGACACTGTTGAAAAATGTCGACCTGCGTACCTTTGTGTTTTCACTGTCTGATGCAAATCTGTCCTGCCGTTATTCCTGCTGAAAAGAAGATCATACTTCGGCTGTTCGGCNAAAACCATACTTGGAAGCCTTCTTTAACATGGATTACTTATTTCTTCTTGATCTGCTACATAAGTCAGAAACCAGAATATCTGTC ATGGGTAGGCATAGGGAAACTACTAGTCTCATGTAGATTTTGTTCAATGCTGTATGCCATTCACCTGTAAAGTGTGCCTTTGAAAGGGACTGACTGATTAGCTGAAGTCTTTTACTGATGCTGATTGCCATAGAATGGTNACTTTTTACCCAGCAaaaaaaaaa ] [-] EMBL CB619987 [ CTCCACCAAGGAAGATAAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGACCTGAGAAATTGTGATGGAGTACTCCTCCAAACTTGTTATTGGAAGATTTTTGGTGGGCATGACACTGTTGAAAAATGTCGACCTGCGTCCCTTTGTGTTTTCACTGTGTGATGCAAATCTGTCCTGCCGTTATTCCTGCCGAAAAGAAGATCATACTTCGGCTGTTCGGCAAAAACCATGTTTGGAAGCTTTCTTTAACACGGATTACTTATTTCTTCTGGATCTGCTCCATAAGTCAGAAACCAGAATATCTGTCAATGGGTAGCCATGGGGAATCTACTAGTCTCATGTAGATTTTGTTCAATGCTGTATGCCATTCACCTGTAAAGTGTGCCTTTGAAAGGGACTGACTGATTAGCTGAAGTCTTTTACTGATGCTGATTG CATAGAATGGTAACTTTTTACCCAGCAGCCGATAGTTAAGTGTTTTTATCTATGTGATAGGTGCTTTGTC ] consensusID : consensus_12962#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1306 fasta sequence [TTCCTCTCTCTCCCCCTTCCTCCTCCTCCGGCCGGTCCGGTCACCGCCTGCCTCGTCGTCGCCGGCGCTGATCGGTTTCGCCCGCCCGACCGCGGCGGAGATCGAGGTATGATGGACGGGAACGCGGTGGACGAGCTGATACGGCGGCTGCTCGACGGGAAGAAGGTCAAGCCGTCGTCGTCGGCGAAGAAGGTGCAGCTCAGCGAGGCGGAGATCCGGCAGCTCTGCGTCACCGGCAAGGACATCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAACGTCTGCGGCGACATCCACGGCCAATTCTCCGACCTGCTCCGGCTGTTCGAGTTCGGCGGGCTGCCGCCGACGGCGAACTACCTGTTCCTCGGCGACTACGTGGACCGCGGGAAGCAGAGCATCGAGACGATCTGCCTCCTGCTGGCATACAAGATCAAGTACCCGGACAACTTCTTCCTGCTGCGAGGCAACCACGAGTGCGCGTCGATCAACCGAATCTACGGGTTCTACGACGAGTGCAAGCGCCGGTTCAGCGTCCGCCTCTGGAAGCTCTTCACCGACTGCTTCAACTGCCTCCCCGTCGCCGCCGTCATCGACGACAAGATCCTCTGCATGCACGGCGGCCTCTCGCCGGACCTCGACAGCCTCGACCGGATCAGGGAGATCGCCCGACCCGTCGACGTCCCCGACCAGGGCCTCCTCTGCGACCTCCTCTGGTCCGACCCCGACCGCGAGAGCTCCGGCTGGGGCGAGAACGACCGCGGCGTCTCCTTCACCTTCGGCGCCGACAAGGTCACCGAGTTCCTCAACAAGCACGACCTCGACCTCATCTGCCGCGCTCACCAGGTGGTGGAGGACGGCTACGAGTTCTTCGCGGACAGGCAGCTGGTGACCATATTCTCGGCGCCGAACTACTGCGGCGAGTTCAACAACGCCGGCGCGCTGATGAACGTGGACGCCAGCCTGCTCTGCTCGTTCCAGATCCTCAAGCCGTTCAGAGGCAAGTCGCAGGCGGAGTGACGACGAAGAGACGACGCCGGCGAGGCTAGCCGGCCGTCGATCGAGGCAGAGAATTTTTCTTTTTTTTTTGGGGATTTAGACAGAGGCTTCGTATACGTAGATCTGCATGCGCATTTCACAGCACAGAATTTTCTCGTTGATGCATATTTGGGGGGACAAACAGATGATCCAACCTCCACTTCTTCTGAATCCTTTGCTTGTAAACTGATTCAATACTTGTATATATAACCAATTAACCAAACATATAGTTCCTTAATCCTATATATGCATGGTC] [+] EMBL AK121378 [TTCCTCTCTCTCCCCCTTCCTCCTCCTCCGGCCGGTCCGGTCACCGCCTGCCTCGTCGTCGCCGGCGCTGATCGGTTTCGCCCGCCCGACCGCGGCGGAGATCGAGGTATGATGGACGGGAACGCGGTGGACGAGCTGATACGGCGGCTGCTCGACGGGAAGAAGGTCAAGCCGTCGTCGTCGGCGAAGAAGGTGCAGCTCAGCGAGGCGGAGATCCGGCAGCTCTGCGTCACCGGCAAGGACATCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAACGTCTGCGGCGACATCCACGGCCAATTCTCCGACCTGCTCCGGCTGTTCGAGTTCGGCGGGCTGCCGCCGACGGCGAACTACCTGTTCCTCGGCGACTACGTGGACCGCGGGAAGCAGAGCATCGAGACGATCTGCCTCCTGCTGGCATACAAGATCAAGTACCCGGACAACTTCTTCCTGCTGCGAGGCAACCACGAGTGCGCGTCGATCAACCGAATCTACGGGTTCTACGACGAGTGCAAGCGCCGGTTCAGCGTCCGCCTCTGGAAGCTCTTCACCGACTGCTTCAACTGCCTCCCCGTCGCCGCCGTCATCGACGACAAGATCCTCTGCATGCACGGCGGCCTCTCGCCGGACCTCGACAGCCTCGACCGGATCAGGGAGATCGCCCGACCCGTCGACGTCCCCGACCAGGGCCTCCTCTGCGACCTCCTCTGGTCCGACCCCGACCGCGAGAGCTCCGGCTGGGGCGAGAACGACCGCGGCGTCTCCTTCACCTTCGGCGCCGACAAGGTCACCGAGTTCCTCAACAAGCACGACCTCGACCTCATCTGCCGCGCTCACCAGGTGGTGGAGGACGGCTACGAGTTCTTCGCGGACAGGCAGCTGGTGACCATATTCTCGGCGCCGAACTACTGCGGCGAGTTCAACAACGCCGGCGCGCTGATGAACGTGGACGCCAGCCTGCTCTGCTCGTTCCAGATCCTCAAGCCGTTCAGAGGCAAGTCGCAGGCGGAGTGACGACGAAGAGACGACGCCGGCGAGGCTAGCCGGCCGTCGATCGAGGCAGAGAATTTTTCTTTTTTTTTTGGGGATTTAGACAGAGGCTTCGTATACGTAGATCTGCATGCGCATTTCACAGCACAGAATTTTCTCGTTGATGCATATTTGGGGGGACAAACAGATGATCCAACCTCCACTTCTTCTGAATCCTTTGCTTGTAAACTGATTCAATACTTGTATATATAACCAATTAACCAAACATATAGTTCCTTAATCCTATATATGCATGGTC] [+] EMBL C72905 [ CCTCCTCCGGCCGGTCCGGTCACCGCCTGCCTCGTCGTCGCCGGCGCTGATCGGTTTCGCCCGCCCGACCGCGGCGGAGATCGAGGTATGATGGACGGGAACGCGGTGGACGAGCTGATACGGCGGCTGCTCGACGGGAAGAAGGTCAAGCCGTCGTCGTCGGCGAAGAAGGTGCAGCTCAGCGAGGCGGAGATCCGGCAGCTCTGCGTCACCGGCAAGGACATCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAACGTCTGCGGCGACATCCACGGCCAATTCTCCGACCTGCTCCGGCTGTTCGAGTTCGGCGGGCTG CGGCGACGGGAAACTAACTGTTCCTCGGCGANTANGTGGACCGCGGGAAGAAGA NATCGA AAGAT ] [+] EMBL AU165543 [ cCAACAACGCCGGCGCGCTGATGAACGTGGNCGCCAGCCTGCTCTGCTCGTTCCAGATCCTCAAGCCGTTCAGAGGCAAGTCGCAGGCGGNGTGACGACGAAGAGACGACGCCGGCGAGGCTAGCCGGCCGTCGATCGAGGCAGAGAATTTTTCTTTTTTTTTTGGGGATTTAGACAGAGGCTTCGTATACGTAGATCTGCATGCGCATTTCACAGCACAGAATTTTCTCGTTGATGCATATTTGGGGGGACAAACAGATGATCCAACCTCCACTTCTTCTGAATCCTTTGCTTGTAAACTGATTCAATACTTGTATATATAACCAATTAACCAAACATATAGTTCCTTAAaaa ] consensusID : consensus_12962#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 216 fasta sequence [TCTGATAAGAAAGGAAAAGCAGGAACCGGAAATATGTCAAAACCTGGAACTCCACCAAGGAAGATNAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGAACTGAGAAATTGTGATGGAGTACTCCTCCAAACTTGTTATTGGAAGATTTTTGGTGCGCATGACACTGTTNAAAAATGTCGACCTGCGTACCTTTGTGTTTTTNANANAANA] [-] EMBL OSS2103A [TCTGATAAGAAAGGAAAAGCAGGAACCGGAAATATGTCAAAACCTGGAACTCCACCAAGGAAGATNAAAATTAATATTATTTAGGCAGATTCCCACTAATGTGAACTGAGAAATTGTGATGGAGTACTCCTCCAAACTTGTTATTGGAAGATTTTTGGTGCGCATGACACTGTTNAAAAATGTCGACCTGCGTACCTTTGTGTTTTTNANANAANA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12962#0 CCGTTCGCTCTCCCTCCTCCTCCTCCTCGTCTCCGCCGATCGAAGGAAAACAAAAAGCTA 60 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 -------------TTCCTCTCTCTCCCCCTTCCTCCTCCTCCGGCCGGTCCGGTCACCGC 47 consensus_12962#0 GGGTTTAGCTGCCTCTCTCGCTCGCCATCGCTCGCGGCGACTCGCTGCTAGGGTTTTTGG 120 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CTGCCTCGTCGTCGCCGGCGCTGATCGGTTTCGCCCGCCCGACCGCGGCGGAGATCGAGG 107 consensus_12962#0 GTCTCTCTCTCTCTCTCCACCGGCGATGGATGCGGCGGCGCTCGACGACTTGATCCGGCG 180 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 TATGATGGACGGGAACGCGGTGGACGAGCTGATACGGCGGCTGCTCGACGGGAAGAAGGT 167 consensus_12962#0 GCTCCTGGACGCCCGCGGCGGCCGCACGGCGCGCCCCGCGCAGCTCGCCGACGCGGAGAT 240 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CAAGCCGTCGTCGTCGGCGAAGAAGGTGCAGCTCAGCGAGGCGGAGATCCGGCAGCTCTG 227 consensus_12962#0 CCGCAAGCTCTGCGCCGCCGCCAAGGACGTCTTCCTCTCCCAGCCCAACCTCCTCGAGCT 300 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CGTCACCGGCAAGGACATCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCAT 287 consensus_12962#0 CGAGGCCCCCATCAAAATCTGCGGAGATATCCATGGCCAGTATTCTGATCTTCTTCGGTT 360 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CAACGTCTGCGGCGACATCCACGGCCAATTCTCCGACCTGCTCCGGCTGTTCGAGTTCGG 347 consensus_12962#0 ATTTGAGTATGGGGGCTTCCCACCAGAGGCAAACTACTTGTTTCTAGGTGATTATGTTGA 420 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CGGGCTGCCGCCGACGGCGAACTACCTGTTCCTCGGCGACTACGTGGACCGCGGGAAGCA 407 consensus_12962#0 CCGTGGGAAACAGAGTATAGAAACTATATGTCTTCTCCTTGCGTATAAGATTAAGTACCC 480 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 GAGCATCGAGACGATCTGCCTCCTGCTGGCATACAAGATCAAGTACCCGGACAACTTCTT 467 consensus_12962#0 AGAGAACTTCTTCCTCCTTAGGGGAAACCATGAGTGCGCATCTATCAACCGAATCTACGG 540 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CCTGCTGCGAGGCAACCACGAGTGCGCGTCGATCAACCGAATCTACGGGTTCTACGACGA 527 consensus_12962#0 ATTCTTTGATGAATGCAAAAGGAGGTTTAATGTTCGTATTTGGAAGGTTTTTACTGATTG 600 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 GTGCAAGCGCCGGTTCAGCGTCCGCCTCTGGAAGCTCTTCACCGACTGCTTCAACTGCCT 587 consensus_12962#0 TTTCAACTGCCTCCCTGTGGCTGCACTTATTGATGACAAGATCCTATGCATGCATGGGGG 660 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CCCCGTCGCCGCCGTCATCGACGACAAGATCCTCTGCATGCACGGCGGCCTCTCGCCGGA 647 consensus_12962#0 TTTATCTCCTGACCTAAAGAACATGGACCAGATTCGCAACATTGCCCGCCCAGTTGATGT 720 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CCTCGACAGCCTCGACCGGATCAGGGAGATCGCCCGACCCGTCGACGTCCCCGACCAGGG 707 consensus_12962#0 TCCAGACCATGGTCTCCTGTGTGATCTGTTGTGGTCAGACCCAGATAAAGAAATCGAAGG 780 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CCTCCTCTGCGACCTCCTCTGGTCCGACCCCGACCGCGAGAGCTCCGGCTGGGGCGAGAA 767 consensus_12962#0 TTGGGGTGAGAATGACAGGGGTGTATCATACACTTTTGGAGCTGATAAGGTCGCTGAGTT 840 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CGACCGCGGCGTCTCCTTCACCTTCGGCGCCGACAAGGTCACCGAGTTCCTCAACAAGCA 827 consensus_12962#0 TCTCCAGACACATGATCTAGATCTGATCTGCAGGGCTCACCAGGTTGTGGAGGATGGCTA 900 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CGACCTCGACCTCATCTGCCGCGCTCACCAGGTGGTGGAGGACGGCTACGAGTTCTTCGC 887 consensus_12962#0 TGAATTCTTTGCTAAGCGCCAGCTTGTAACCATATTCTCTGCACCCAACTATTGTGGCGA 960 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 GGACAGGCAGCTGGTGACCATATTCTCGGCGCCGAACTACTGCGGCGAGTTCAACAACGC 947 consensus_12962#0 GTTTGACAATGCGGGGGCGATGATGAGCATTGATGATTCTCTTACATGCTCATTCCAGAT 1020 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 CGGCGCGCTGATGAACGTGGACGCCAGCCTGCTCTGCTCGTTCCAGATCCTCAAGCCGTT 1007 consensus_12962#0 CCTTAAGCCTTCTGATAAGAAAGGAAAAGCAGGAACCGGAAATA-TGTCAAAACCTGGAA 1079 consensus_12962#2 ----------TCTGATAAGAAAGGAAAAGCAGGAACCGGAAATA-TGTCAAAACCTGGAA 49 consensus_12962#1 CAGAGGCAAGTCGCAGGCGGAGTGACGACGAAGAGACGACGCCGGCGAGGCTAGCCGGCC 1067 ** * * * ** * * ** ** * * * ** consensus_12962#0 CTCCACCAAGGAAGATAAAAATTAATATTATTTAGGCAGATTCCCACTAATG--TGAACT 1137 consensus_12962#2 CTCCACCAAGGAAGATNAAAATTAATATTATTTAGGCAGATTCCCACTAATG--TGAACT 107 consensus_12962#1 GTCGATCGAGGCAGAGAATTTTTCTTTTTTTTTTGG-GGATTTAGACAGAGGCTTCGTAT 1126 ** * * *** *** * ** * ** *** ** **** ** * * * * consensus_12962#0 GAGAAATTGTGATGGAGTACTCCTCCAAAC------TTGTTATTGGAAGATTTTTGGTGC 1191 consensus_12962#2 GAGAAATTGTGATGGAGTACTCCTCCAAAC------TTGTTATTGGAAGATTTTTGGTGC 161 consensus_12962#1 ACGTAGATCTGCATGCGCATTTCACAGCACAGAATTTTCTCGTTGATGCATATTTGGGGG 1186 * * * ** * * * * * * ** ** * *** ** ***** * consensus_12962#0 GCATGACAC-TGTTGAAAAATGTCGACCTGCGTACCTTTGTGTTTTCACTGTCTGATGCA 1250 consensus_12962#2 GCATGACAC-TGTTNAAAAATGTCGACCTGCGTACCTTTGTGTTTTTNANANAANA---- 216 consensus_12962#1 GACAAACAGATGATCCAACCTCCACTTCTTCTGAATCCTTTGCTTGTAAACTGATTCAAT 1246 * *** ** * ** * ** * * * ** ** consensus_12962#0 AATCTGTCCTGCCGTTATTCCTGCTGAAAAGAAGATCATACTTCGGCTGTTCGGCAAAAA 1310 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 ACTTGTATATATAACCAATTAACCAAACATATAGTTCCTTAATCCTATATATGCATGGTC 1306 consensus_12962#0 CCATACTTGGAAGCCTTCTTTAACATGGATTACTTATTTCTTCTTGATCTGCTACATAAG 1370 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 ------------------------------------------------------------ consensus_12962#0 TCAGAAACCAGAATATCTGTCAATGGGTAGGCATAGGGAAACTACTAGTCTCATGTAGAT 1430 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 ------------------------------------------------------------ consensus_12962#0 TTTGTTCAATGCTGTATGCCATTCACCTGTAAAGTGTGCCTTTGAAAGGGACTGACTGAT 1490 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 ------------------------------------------------------------ consensus_12962#0 TAGCTGAAGTCTTTTACTGATGCTGATTGCATAGAATGGTAACTTTTTACCCAGCAGCTG 1550 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 ------------------------------------------------------------ consensus_12962#0 ATAGTTAAGTGTCTTTATCTATGTGATAGGTGCTTTGTCATTGCCATTTTAAACAAGCAT 1610 consensus_12962#2 ------------------------------------------------------------ consensus_12962#1 ------------------------------------------------------------ consensus_12962#0 TTT 1613 consensus_12962#2 --- consensus_12962#1 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||