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Oryza sativa
cluster # 12970 cluster # 12970       Sequences # 11       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12970#0 length = 2081 sequences # 9  
 consensus_12970#1 length = 604 sequences # 1  
consensus_12970#2 length = 594 sequences # 1  
consensusID : consensus_12970#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2081
fasta sequence 
                              [CCGCGCATCCTCCTCCTCTTCCACCTCTCCCCACCCTCCCTCTCCGCTCCTCCGCCTCCGCCTCCGCCTCCGCGTGCTCCCGTAACCGCGCCGCCGCAGCCTCCGCCTCCGCGCGGTTCCTCCCGCAAGCGGCTTCTCCGCCGCGCGCGTCCGTTTCTCTCCCGATCCCCGCCGCCCGGGGGGGTGCCGTGCACTCGTCGCCGTCGCTGGGCGCCTGCCGTGTCGGCGGCGGCCGGTGGGCGAGATTTTGTCGCCGCGCGCGGGGCGGGGGCACGGTTGGTTTTGAGGCGAGATTGATTGCCAGGTTCACAATGAATACAGAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACATCACTGAAAATTCTCACAGAATGTTGGAGGGTCAATCTTGCTTGATCTCAAGGTCTTTGCCAAGCTCCTGTGATCAAGAATCCAGATTAGCATACATGACCTACCACCTCCTTGAGATAACGAGGAGTAAGCGCATATCAAGTACTCCGAGGATTGAACCTGATAGTGTTGCTGCAGTAGCAGTACTGACCAAACGACCTAAATCTGCCA-GGAACCATGAGTGTGAGCAGCTGGATTGTCAAGGCAGCAATGATCAGGGTTTTTCGGATTCAAGTACCCTAATAAGTTCTATCGGTCGAGATAACTCAATCAGTTGCCTCGCCCGTTGCTCTCGTTCAGATTATGGCTCCATTGCATCAGTCAATCGGAACTTCCACTCACTTGTCCGCAGTGGGGAGCTTTACAAGGAACGGCGTCAGTTGGGGATTGCAGAACATTGGGTCTATTTCTCCTGCAACGTGCAGGAGTGGGAAGCTTATGACCCTTACCGTTCACGGTGGATGACACTCCCAAAGATGCCACACAATGAGTGTTTCATGTGCTCAGACAAGGAGTCACTTGCAGTGGGCACCGAACTCCTGGTTTTTGGCAAGGAGATTCTTTCCCACATTGTTCTGAGTTACAGTATTCTGACAAACTCGTGGTCGCCTGGTGTTGATATGAATGCCCCTAGATGCTTGTTTGG-ATCAGCTAGCTTTGGAGAGAAAGCAATTGTAGCTGGTGG-CATGGATGCTCAAGGTCGGGTGCTACGCTCTGCTGAGCTGTACAACTCTGAAACTAAGAGATGGATAACACTCCCATGCATGAACAAGGCTAGGCGAATGTGTTCTGGAGTCTTTATGAACGGCAAATTTTACGTAATTGGGGGAATGGCCAGTAACACGGAGGTGCTGACCTGCGGAGAAGAGTATGATTTGGAGAAAGGTACCTGGAGGGTGATAGAGAACATGTCTGAGGGGCTCAACGGTGCAAGTGGTGCACCTCCCCTTGTTGCTG-TTGTTGAAAATGAGTTATATGCTGCACAATATG-CAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACA-CATGGACAACACTGGGAGAGTTA-CCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGAGGATGTGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATTGAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCTTGCCGAACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAATGTCATAAAGCACCGATTCGCCTGATGGGTAATCTCTGCCTTTCTTTTTGACATTTCAGATTTTACACGTGGTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGATGCATTTAGTCGACAAACTGTAATTGAGGCACCATTGCATCTGTACAATTGTATGAGGTTCTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGGAAGAACATGAATTATAATGTTCCTCTGTTCACTTTAAAAAA]

[+] EMBL AK066613             [CCGCGCATCCTCCTCCTCTTCCACCTCTCCCCACCCTCCCTCTCCGCTCCTCCGCCTCCGCCTCCGCCTCCGCGTGCTCCCGTAACCGCGCCGCCGCAGCCTCCGCCTCCGCGCGGTTCCTCCCGCAAGCGGCTTCTCCGCCGCGCGCGTCCGTTTCTCTCCCGATCCCCGCCGCCCGGGGGGGTGCCGTGCACTCGTCGCCGTCGCTGGGCGCCTGCCGTGTCGGCGGCGGCCGGTGGGCGAGATTTTGTCGCCGCGCGCGGGGCGGGGGCACGGTTGGTTTTGAGGCGAGATTGATTGCCAGGTTCACAATGAATACAGAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACATCACTGAAAATTCTCACAGAATGTTGGAGGGTCAATCTTGCTTGATCTCAAGGTCTTTGCCAAGCTCCTGTGATCAAGAATCCAGATTAGCATACATGACCTACCACCTCCTTGAGATAACGAGGAGTAAGCGCATATCAAGTACTCCGAGGATTGAACCTGATAGTGTTGCTGCAGTAGCAGTACTGACCAAACGACCTAAATCTGCCA GGAACCATGAGTGTGAGCAGCTGGATTGTCAAGGCAGCAATGATCAGGGTTTTTCGGATTCAAGTACCCTAATAAGTTCTATCGGTCGAGATAACTCAATCAGTTGCCTCGCCCGTTGCTCTCGTTCAGATTATGGCTCCATTGCATCAGTCAATCGGAACTTCCACTCACTTGTCCGCAGTGGGGAGCTTTACAAGGAACGGCGTCAGTTGGGGATTGCAGAACATTGGGTCTATTTCTCCTGCAACGTGCAGGAGTGGGAAGCTTATGACCCTTACCGTTCACGGTGGATGACACTCCCAAAGATGCCACACAATGAGTGTTTCATGTGCTCAGACAAGGAGTCACTTGCAGTGGGCACCGAACTCCTGGTTTTTGGCAAGGAGATTCTTTCCCACATTGTTCTGAGTTACAGTATTCTGACAAACTCGTGGTCGCCTGGTGTTGATATGAATGCCCCTAGATGCTTGTTTGG ATCAGCTAGCTTTGGAGAGAAAGCAATTGTAGCTGGTGG CATGGATGCTCAAGGTCGGGTGCTACGCTCTGCTGAGCTGTACAACTCTGAAACTAGGAGATGGATAACACTCCCATGCATGAACAAGGCTAGGCGAATGTGTTCTGGAGTCTTTATGAACGGCAAATTTTACGTAATTGGGGGAATGGCCAGTAACACGGAGGTGCTGACCTGCGGAGAAGAGTATGATTTGGAGAAAGGTACCTGGAGGGTGATAGAGAACATGTCTGAGGGGCTCAACGGTGCAAGTGGTGCACCTCCCCTTGTTGCTG TTGTTGAAAATGAGTTATATGCTGCACAATATG CAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACA CATGGACAACACTGGGAGAGTTA CCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGAGGATGTGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATTGAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCTTGCCGAACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAATGTCATAAAGCACCGATTCGCCTGATGGGTAATCTCTGCCTTTCTTTTTGACATTTCAGATTTTACACGTGGTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGATGCATTTAGTCGACAAACTGTAATTGAGGCACCATTGCATCTGTACAATTGTATGAGGTTCTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGGAAG                                      ]
[+] EMBL OS0370A              [                                                                                                                                                                                                                                                                                                       GATTGCCAGGTTCACAATGAATACAGAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACATCACTGAAAATTCTCACAGAATGTTGGAGGGTCAATCTTGCTTGATCTCAAGGTCTTTGCCAAGCTCCTGTGATCAAGAATCCAGATTAGCATACATGACCTACCACCTCCTTGAGATAACGAGGAGTAAGCGCATATCAAGTACTCCGAGGATTGAACCTGATAGTGTTGCTGCAGTAGCAGTACTGACCAAACGACCTAAATNTGCCAGGGAACCATGAGTGTGAGTAGCTGGATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK100919             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCACCGAACTCCTGGTTTTTGGCAAGGAGATTCTTTCCCACATTGTTCTGAGTTACAGTATTCTGACAAACTCGTGGTCGCCTGGTGTTGATATGAATGCCCCTAGATGCTTGTTTGG ATCAGCTAGCTTTGGAGAGAAAGCAATTGTAGCTGGTGG CATGGATGCTCAAGGTCGGGTGCTACGCTCTGCTGAGCTGTACAACTCTGAAACTAAGAGATGGATAACACTCCCATGCATGAACAAGGCTAGGCGAATGTGTTCTGGAGTCTTTATGAACGGCAAATTTTACGTAATTGGGGGAATGGCCAGTAACACGGAGGTGCTGACCTGCGGAGAAGAGTATGATTTGGAGAAAGGTACCTGGAGGGTGATAGAGAACATGTCTGAGGGGCTCAACGGTGCAAGTGGTGCACCTCCCCTTGTTGCTG TTGTTGAAAATGAGTTATATGCTGCACAATATG CAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACA CATGGACAACACTGGGAGAGTTA CCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGAGGATGTGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATTGAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCTTGCCGAACATACTGTGAACATG                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C98011               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTGGAATCAGCTAGCTTTGGAGAGAAAACAATTGTAGCTGTTGGCCATGGATGCNCAAGGTCGGGTTCTAC CTCTGCTGAGCTTTACAACTCTGAAACTAAGAGATGGATAACACTCCCATGCATGAACAAGGCTAGGCGAATGTGTTCTGGAGTCTTTATGAACGGCAAATTTTACGTAATTGGGGGAATGGCCAGTAACACGGAGGTGCTGA CTGCGGAGAAGAGTATGATTTGGAGAAAGGTACCTGGAGGGTGATAGAGAACATGTCTGAGGGGCTCAACGGTGCAAGTGGTGCACCTCCCCTTGTTGCTG TTGTTGAAAATGAGTTATATGCTGCACAATATG CAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACA CATGGACAACACTGGGAGAGTTA CCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGAGGATGTGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATTGAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCTTGCCGAACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAAaaaaaaaaa                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CA762031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTTGAGGGGCTCAACGGTGCAAGTGGTGCACCTCCCCCTG TGCTGTTTGTTGAAAATGAGTTATATGCTGCACAATATG CAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACA CATGGNCAACACTGGGAGAGTTA CCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGAGGATGTGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATTGAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCTTGCCGAACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAATGTCATAAAGCACCGATTCGCCTGATGGGTAATCTCTGCCTTTCTTTTTGACATTTCAGATTTTACACGTGGTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGATGCATTTAGTCGACAAACTGTAATTGAGGCATCATTGCATCTGTACAATTGTATGAGGTTCTGATTTGGTGCCaaaaaaaa                                                                           ]
[+] EMBL AU093925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATGCCAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACACCATGGACAACACTGGGAGAGTTACCCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGAGGATGTGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATTGAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCTTGCCGAACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAATGTCATAAAGCACCGATTCGCCTGATGGGTAATCTCTGCCTTTCTTTTTGACATTTCAGATTTTACACGTGGTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGATGCATTTAGTCGACAAACTGTAATTGAGGCACCATTGCATCTGTACAATTGTATGAGGTTCTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGGAAGAACATGAATTATAATGTTCCTCTGTTCACTTTAAAAA ]
[+] EMBL CA766942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGATGATTGAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCCCTTGCCGAACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAATGTCATAAAGCACCGATTTGCCTGATGGGTAATCTCTGCCTTTCTTTTTGACATTTCAGATTTTACACGTGGTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGATGCATTTAGTCGACAAACTGTAATTGAGGCATCATTGCATCTGTACAATTGTATGAGGTTCTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGGAAGAACATGAATTATAATGTTCCTCTGTTCA          ]
[+] EMBL AU058136             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGTGGTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGATGCATTTAGTCGACAAACTGTAATTGAGGCACCATTGCATCTGTACAATTGTATGAGGTTCTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGGAAGAACATGAATTATAATGTTCCTCTGTTCACTTTAAAAAA]
[+] EMBL AU174402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTGGTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGATGCATTTAGTCGACAAACTGTAATTGAGGCACCATTGCATCTGTACAATTGTATGAGGTTCTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGGAAGAACATGAATTATAATGTTCCTCTGTTCACTTTAAAAAA]




>consensus_12970#0
CCGCGCATCCTCCTCCTCTTCCACCTCTCCCCACCCTCCCTCTCCGCTCCTCCGCCTCCG
CCTCCGCCTCCGCGTGCTCCCGTAACCGCGCCGCCGCAGCCTCCGCCTCCGCGCGGTTCC
TCCCGCAAGCGGCTTCTCCGCCGCGCGCGTCCGTTTCTCTCCCGATCCCCGCCGCCCGGG
GGGGTGCCGTGCACTCGTCGCCGTCGCTGGGCGCCTGCCGTGTCGGCGGCGGCCGGTGGG
CGAGATTTTGTCGCCGCGCGCGGGGCGGGGGCACGGTTGGTTTTGAGGCGAGATTGATTG
CCAGGTTCACAATGAATACAGAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGA
GACATCACTGAAAATTCTCACAGAATGTTGGAGGGTCAATCTTGCTTGATCTCAAGGTCT
TTGCCAAGCTCCTGTGATCAAGAATCCAGATTAGCATACATGACCTACCACCTCCTTGAG
ATAACGAGGAGTAAGCGCATATCAAGTACTCCGAGGATTGAACCTGATAGTGTTGCTGCA
GTAGCAGTACTGACCAAACGACCTAAATCTGCCAGGAACCATGAGTGTGAGCAGCTGGAT
TGTCAAGGCAGCAATGATCAGGGTTTTTCGGATTCAAGTACCCTAATAAGTTCTATCGGT
CGAGATAACTCAATCAGTTGCCTCGCCCGTTGCTCTCGTTCAGATTATGGCTCCATTGCA
TCAGTCAATCGGAACTTCCACTCACTTGTCCGCAGTGGGGAGCTTTACAAGGAACGGCGT
CAGTTGGGGATTGCAGAACATTGGGTCTATTTCTCCTGCAACGTGCAGGAGTGGGAAGCT
TATGACCCTTACCGTTCACGGTGGATGACACTCCCAAAGATGCCACACAATGAGTGTTTC
ATGTGCTCAGACAAGGAGTCACTTGCAGTGGGCACCGAACTCCTGGTTTTTGGCAAGGAG
ATTCTTTCCCACATTGTTCTGAGTTACAGTATTCTGACAAACTCGTGGTCGCCTGGTGTT
GATATGAATGCCCCTAGATGCTTGTTTGGATCAGCTAGCTTTGGAGAGAAAGCAATTGTA
GCTGGTGGCATGGATGCTCAAGGTCGGGTGCTACGCTCTGCTGAGCTGTACAACTCTGAA
ACTAAGAGATGGATAACACTCCCATGCATGAACAAGGCTAGGCGAATGTGTTCTGGAGTC
TTTATGAACGGCAAATTTTACGTAATTGGGGGAATGGCCAGTAACACGGAGGTGCTGACC
TGCGGAGAAGAGTATGATTTGGAGAAAGGTACCTGGAGGGTGATAGAGAACATGTCTGAG
GGGCTCAACGGTGCAAGTGGTGCACCTCCCCTTGTTGCTGTTGTTGAAAATGAGTTATAT
GCTGCACAATATGCAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACACATGGACA
ACACTGGGAGAGTTACCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGA
GGATGTGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATT
GAGCTCCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAG
CCTTCTGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCT
TGCCGAACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAATGTCATAAAGC
ACCGATTCGCCTGATGGGTAATCTCTGCCTTTCTTTTTGACATTTCAGATTTTACACGTG
GTTCAATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCA
CATTCGATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCG
ATGGATGCATTTAGTCGACAAACTGTAATTGAGGCACCATTGCATCTGTACAATTGTATG
AGGTTCTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGG
AAGAACATGAATTATAATGTTCCTCTGTTCACTTTAAAAAA

consensusID : consensus_12970#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 604
fasta sequence 
                              [AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGATACTCCTCCTCTTCCACCTCTCCCCACCCTCCCTCTCCTCTCCTCCCCCTCCCTCTCCGCCTCCGCGTGTTCCCGTACCCGCGCCGGCGCTGCCTCCGCCTCCGCGCGGTTCCTCCCGCATGCGCGTTCTCCCCCGCGCGCGTCCGTTTCTCTCCCGATCCCCGCCGCCCTCTCCGGTGCCGTGCACTCGTCGCCGTCGCTGGGCGCCTGCCGTGTTCCGTGCGGGCCGTGCGCGAGATTTTGTCGCCGCGCGCGAGCTGTTGGCACCCTTGCTTTTGCGGCGACATTGATTGCCTTGTTCACCATGAATACCCAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACCTCTCTGAATATTCTCCCAGATCGTCGGAGGGTCCCTCTTGCTTGATCTCCGGGTCTCTGCCTAGCTCCCGTGCTCTTGATCCCCATTAGCGTACCTGACCTACCACCTCCTTGAGCTACCGACGACCTCGGCTGATATCAAGTTACTCCCAGCTTTGTCCCTGATCCTTGTTGGCTGCAGCCCCCCTTCTGACCCCACGACCTCATTC]

[+] EMBL CA754583             [AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGATACTCCTCCTCTTCCACCTCTCCCCACCCTCCCTCTCCTCTCCTCCCCCTCCCTCTCCGCCTCCGCGTGTTCCCGTACCCGCGCCGGCGCTGCCTCCGCCTCCGCGCGGTTCCTCCCGCATGCGCGTTCTCCCCCGCGCGCGTCCGTTTCTCTCCCGATCCCCGCCGCCCTCTCCGGTGCCGTGCACTCGTCGCCGTCGCTGGGCGCCTGCCGTGTTCCGTGCGGGCCGTGCGCGAGATTTTGTCGCCGCGCGCGAGCTGTTGGCACCCTTGCTTTTGCGGCGACATTGATTGCCTTGTTCACCATGAATACCCAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACCTCTCTGAATATTCTCCCAGATCGTCGGAGGGTCCCTCTTGCTTGATCTCCGGGTCTCTGCCTAGCTCCCGTGCTCTTGATCCCCATTAGCGTACCTGACCTACCACCTCCTTGAGCTACCGACGACCTCGGCTGATATCAAGTTACTCCCAGCTTTGTCCCTGATCCTTGTTGGCTGCAGCCCCCCTTCTGACCCCACGACCTCATTC]




>consensus_12970#1
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGATACTCCTCCTCTTCCACCTCT
CCCCACCCTCCCTCTCCTCTCCTCCCCCTCCCTCTCCGCCTCCGCGTGTTCCCGTACCCG
CGCCGGCGCTGCCTCCGCCTCCGCGCGGTTCCTCCCGCATGCGCGTTCTCCCCCGCGCGC
GTCCGTTTCTCTCCCGATCCCCGCCGCCCTCTCCGGTGCCGTGCACTCGTCGCCGTCGCT
GGGCGCCTGCCGTGTTCCGTGCGGGCCGTGCGCGAGATTTTGTCGCCGCGCGCGAGCTGT
TGGCACCCTTGCTTTTGCGGCGACATTGATTGCCTTGTTCACCATGAATACCCAAGGCCT
GGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACCTCTCTGAATATTCTCCCAGATCGT
CGGAGGGTCCCTCTTGCTTGATCTCCGGGTCTCTGCCTAGCTCCCGTGCTCTTGATCCCC
ATTAGCGTACCTGACCTACCACCTCCTTGAGCTACCGACGACCTCGGCTGATATCAAGTT
ACTCCCAGCTTTGTCCCTGATCCTTGTTGGCTGCAGCCCCCCTTCTGACCCCACGACCTC
ATTC

consensusID : consensus_12970#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 594
fasta sequence 
                              [CCCACCCTCCCTCTCCGCTCCTCCGCCTCCGCCTCCGCCTCCGCGTGCTCCCGTAACCGCGCCGCCGCAGCCTCCGCCTCCGCGCGGTTCCTCCCGCAAGCGGCTTCTCCGCCGCGCGCGTCCGTTTCTCTCCCGATCCCCGCCGCCCGGGGGGGTGCCGTGCACTCGTCGCCGTCGCTGGGCGCCTGCCGTGTCGGCGGCGGCCGGTGGGCGAGATTTTGTCGCCGCGCGCGGGGCGGGGGCACGGTTGGTTTTGAGGCGAGATTGATTGGCAGGTAGCTGGCGTATTGTCTTATCTACGTTTGTCCTCGCTTCTCATCTCAACTAATTTACATGGTTTGGTTCGGGTGGAATGTTCAATCCTTGGTCTTGGATAAGGGCGACTTGGAGAATTTAGGTCAATCAAGCGGATGAAGCAACCGTGGGTAATACCCGGGTTGATGGGACTAATTGGAATTTACTTGGAGGGGTGGGAGGTTGGGACTAAAGCATCTTAGGGGTCAGATTTTGGCGCCGAAATTTCCACCCTGGGAGAATTATTTGGGAGACACATTAATTTTCTCTCAGGNATAATGGTTGCTGCCCGAAAGGGAT]

[+] EMBL CA754549             [CCCACCCTCCCTCTCCGCTCCTCCGCCTCCGCCTCCGCCTCCGCGTGCTCCCGTAACCGCGCCGCCGCAGCCTCCGCCTCCGCGCGGTTCCTCCCGCAAGCGGCTTCTCCGCCGCGCGCGTCCGTTTCTCTCCCGATCCCCGCCGCCCGGGGGGGTGCCGTGCACTCGTCGCCGTCGCTGGGCGCCTGCCGTGTCGGCGGCGGCCGGTGGGCGAGATTTTGTCGCCGCGCGCGGGGCGGGGGCACGGTTGGTTTTGAGGCGAGATTGATTGGCAGGTAGCTGGCGTATTGTCTTATCTACGTTTGTCCTCGCTTCTCATCTCAACTAATTTACATGGTTTGGTTCGGGTGGAATGTTCAATCCTTGGTCTTGGATAAGGGCGACTTGGAGAATTTAGGTCAATCAAGCGGATGAAGCAACCGTGGGTAATACCCGGGTTGATGGGACTAATTGGAATTTACTTGGAGGGGTGGGAGGTTGGGACTAAAGCATCTTAGGGGTCAGATTTTGGCGCCGAAATTTCCACCCTGGGAGAATTATTTGGGAGACACATTAATTTTCTCTCAGGNATAATGGTTGCTGCCCGAAAGGGAT]




>consensus_12970#2
CCCACCCTCCCTCTCCGCTCCTCCGCCTCCGCCTCCGCCTCCGCGTGCTCCCGTAACCGC
GCCGCCGCAGCCTCCGCCTCCGCGCGGTTCCTCCCGCAAGCGGCTTCTCCGCCGCGCGCG
TCCGTTTCTCTCCCGATCCCCGCCGCCCGGGGGGGTGCCGTGCACTCGTCGCCGTCGCTG
GGCGCCTGCCGTGTCGGCGGCGGCCGGTGGGCGAGATTTTGTCGCCGCGCGCGGGGCGGG
GGCACGGTTGGTTTTGAGGCGAGATTGATTGGCAGGTAGCTGGCGTATTGTCTTATCTAC
GTTTGTCCTCGCTTCTCATCTCAACTAATTTACATGGTTTGGTTCGGGTGGAATGTTCAA
TCCTTGGTCTTGGATAAGGGCGACTTGGAGAATTTAGGTCAATCAAGCGGATGAAGCAAC
CGTGGGTAATACCCGGGTTGATGGGACTAATTGGAATTTACTTGGAGGGGTGGGAGGTTG
GGACTAAAGCATCTTAGGGGTCAGATTTTGGCGCCGAAATTTCCACCCTGGGAGAATTAT
TTGGGAGACACATTAATTTTCTCTCAGGNATAATGGTTGCTGCCCGAAAGGGAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12970#0      --------------------------------CCGCGCATCCTCCTCCTCTTCCACCTCT 28
consensus_12970#1      AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGATACTCCTCCTCTTCCACCTCT 60
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CCCCACCCTCCCTCTCCGCTCCTCCGCCTCCGCCTCCGCCTCCGCGTGCTCCCGTAACCG 88
consensus_12970#1      CCCCACCCTCCCTCTCCTCTCCTCCCCCTCCCTCTCCGCCTCCGCGTGTTCCCGTACCCG 120
consensus_12970#2      -CCCACCCTCCCTCTCCGCTCCTCCGCCTCCGCCTCCGCCTCCGCGTGCTCCCGTAACCG 59
                        **************** ******* *****  *************** ******* ***

consensus_12970#0      CGCCGCCGCAGCCTCCGCCTCCGCGCGGTTCCTCCCGCAAGCGGCTTCTCCGCCGCGCGC 148
consensus_12970#1      CGCCGGCGCTGCCTCCGCCTCCGCGCGGTTCCTCCCGCATGCGCGTTCTCCCCCGCGCGC 180
consensus_12970#2      CGCCGCCGCAGCCTCCGCCTCCGCGCGGTTCCTCCCGCAAGCGGCTTCTCCGCCGCGCGC 119
                       ***** *** ***************************** ***  ****** ********

consensus_12970#0      GTCCGTTTCTCTCCCGATCCCCGCCGCCCGGGGGGGTGCCGTGCACTCGTCGCCGTCGCT 208
consensus_12970#1      GTCCGTTTCTCTCCCGATCCCCGCCGCCCTCTCCGGTGCCGTGCACTCGTCGCCGTCGCT 240
consensus_12970#2      GTCCGTTTCTCTCCCGATCCCCGCCGCCCGGGGGGGTGCCGTGCACTCGTCGCCGTCGCT 179
                       *****************************     **************************

consensus_12970#0      GGGCGCCTGCCGTGTCGGCGGCGGCCGGTGGGCGAGATTTTGTCGCCGCGCGCGGGGCGG 268
consensus_12970#1      GGGCGCCTGCCGTGTTCCGTGCGGGCCGTGCGCGAGATTTTGTCGCCGCGCGCGAGCTGT 300
consensus_12970#2      GGGCGCCTGCCGTGTCGGCGGCGGCCGGTGGGCGAGATTTTGTCGCCGCGCGCGGGGCGG 239
                       ***************     **** * *** *********************** *  * 

consensus_12970#0      GGGCACGGTTGGTTTTGAGGCGAGATTGATTGCCAGGT----------TCACAATGAATA 318
consensus_12970#1      TGGCACCCTTGCTTTTGCGGCGACATTGATTGCCTTGT----------TCACCATGAATA 350
consensus_12970#2      GGGCACGGTTGGTTTTGAGGCGAGATTGATTGGCAGGTAGCTGGCGTATTGTCTTATCTA 299
                        *****  *** ***** ***** ******** *  **          *     *   **

consensus_12970#0      CAGAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACATCACTGAAAATTC- 377
consensus_12970#1      CCCAAGGCCTGGATTCTTGTGTATAGGTTCTCTCTTCTGAGAGACCTCTCTGAATATTC- 409
consensus_12970#2      CGTTTGTCCTCGCTTCTCATCTCAACTAATTTACATGGTTTGGTTCGGGTGGAATGTTCA 359
                       *    * *** * ****  * *  *     *  * *      *        ***  *** 

consensus_12970#0      -TCACAGAATGTTGGAGGGTCAATCTTGCTTGATCTCAAGGTCTTTGCC-----AAGCTC 431
consensus_12970#1      -TCCCAGATCGTCGGAGGGTCCCTCTTGCTTGATCTCCGGGTCTCTGCC-----TAGCTC 463
consensus_12970#2      ATCCTTGGTCTTGGATAAGGGCGACTTGGAGAATTTAGGTCAATCAAGCGGATGAAGCAA 419
                        **   *    * *    *     ****    ** *       *    *      ***  

consensus_12970#0      CTGTGATCAAGAATCCAGATTAGCATACATGACCTACCACCTCCTTGAGATAACGAGGAG 491
consensus_12970#1      CCGTGCTCTTGA-TCCCCATTAGCGTACCTGACCTACCACCTCCTTGAGCTACCGACGAC 522
consensus_12970#2      CCGTGGGTAATA-CCCGGGTTGATGGGACTAAT-TGGAATTTACTTGGAGGGGTGGGAGG 477
                       * ***      *  **   **        * *  *   *  * ****       *     

consensus_12970#0      -TAAGCGCATATCAAGT-ACT--CCGAGGATTGAACCTGATAGT-GTTG-CTGCAGTAGC 545
consensus_12970#1      CTCGGCTGATATCAAGTTACT--CCCAGCTTTGTCCCTGATCCTTGTTGGCTGCAGCCCC 580
consensus_12970#2      TTGGGACTAAAGCATCTTAGGGGTCAGATTTTGGCGCCGAAATTTCCACCCTGGGAGAAT 537
                        *  *   * * **  * *     *     ***   * **   *      ***       

consensus_12970#0      AGTACTGACCAAACGACCTAAATCTGCCAGGAACCATGAGTGTGAGCAGCTGGATTGTCA 605
consensus_12970#1      CCTTCTGACCCCACGACCTCATTC------------------------------------ 604
consensus_12970#2      TATTTGGGAGACACATTAATTTTCTCTCAGGNATAATGGTTGCTGCCCGAAAGGGAT--- 594
                         *   *     **        **                                    

consensus_12970#0      AGGCAGCAATGATCAGGGTTTTTCGGATTCAAGTACCCTAATAAGTTCTATCGGTCGAGA 665
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      TAACTCAATCAGTTGCCTCGCCCGTTGCTCTCGTTCAGATTATGGCTCCATTGCATCAGT 725
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CAATCGGAACTTCCACTCACTTGTCCGCAGTGGGGAGCTTTACAAGGAACGGCGTCAGTT 785
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      GGGGATTGCAGAACATTGGGTCTATTTCTCCTGCAACGTGCAGGAGTGGGAAGCTTATGA 845
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CCCTTACCGTTCACGGTGGATGACACTCCCAAAGATGCCACACAATGAGTGTTTCATGTG 905
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CTCAGACAAGGAGTCACTTGCAGTGGGCACCGAACTCCTGGTTTTTGGCAAGGAGATTCT 965
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      TTCCCACATTGTTCTGAGTTACAGTATTCTGACAAACTCGTGGTCGCCTGGTGTTGATAT 1025
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      GAATGCCCCTAGATGCTTGTTTGGATCAGCTAGCTTTGGAGAGAAAGCAATTGTAGCTGG 1085
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      TGGCATGGATGCTCAAGGTCGGGTGCTACGCTCTGCTGAGCTGTACAACTCTGAAACTAA 1145
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      GAGATGGATAACACTCCCATGCATGAACAAGGCTAGGCGAATGTGTTCTGGAGTCTTTAT 1205
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      GAACGGCAAATTTTACGTAATTGGGGGAATGGCCAGTAACACGGAGGTGCTGACCTGCGG 1265
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      AGAAGAGTATGATTTGGAGAAAGGTACCTGGAGGGTGATAGAGAACATGTCTGAGGGGCT 1325
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CAACGGTGCAAGTGGTGCACCTCCCCTTGTTGCTGTTGTTGAAAATGAGTTATATGCTGC 1385
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      ACAATATGCAGGAAAGCTAGTAAGGAAATATAACATAAAGGATAACACATGGACAACACT 1445
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      GGGAGAGTTACCAGAGCGGCCAGAAGCTGTGAATGGCTGGGGTATTGCATTCCGAGGATG 1505
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      TGGAGAGCGGCTCTTGGTGATTGGTGGACCAAGAGTGATGGGAGGGGGGATGATTGAGCT 1565
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CCATTCATGGATCCCGAGGGAGGGGCCGTTGCGGTGGAACATGATCGGGAGCAAGCCTTC 1625
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      TGGTAACTTTGTTTATAACTGTGCTGTCATGGGGTGCTGATTTGTGCCACCCTCTTGCCG 1685
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      AACATACTGTGAACATGAAAGATTGTGATATTGGTTTCCTCAAATGTCATAAAGCACCGA 1745
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      TTCGCCTGATGGGTAATCTCTGCCTTTCTTTTTGACATTTCAGATTTTACACGTGGTTCA 1805
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      ATAGAGTAGTTGTTTCAGTGCATGCGTCACTGGTCACCCTTAGGTAAATTTTCCACATTC 1865
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      GATTTGCAGCTGGGAATTTGTACCTTGTTCTACCCTCTATCGGAACAAGTTCCCGATGGA 1925
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      TGCATTTAGTCGACAAACTGTAATTGAGGCACCATTGCATCTGTACAATTGTATGAGGTT 1985
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CTGATTTGGTGCCTGTCGATCCCATTACTCTTTTGTGCAAATGTTTCTTGACAGGAAGAA 2045
consensus_12970#1      ------------------------------------------------------------
consensus_12970#2      ------------------------------------------------------------
                                                                                   

consensus_12970#0      CATGAATTATAATGTTCCTCTGTTCACTTTAAAAAA 2081
consensus_12970#1      ------------------------------------
consensus_12970#2      ------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)