cluster # 12977

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Oryza sativa
cluster # 12977 cluster # 12977 Sequences # 12 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12977#0 length = 1070 sequences # 12
consensusID : consensus_12977#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1070
fasta sequence
                              [CACCCACGAGCTATACCAAGTACTCTCTTTCTCACTCGATTGATTCAAGCAGCAAATAATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCGG-TGAACCCGAAGCAGAGCCGG-TGCACGGTGACCGGGTA-CGTGGAGGCGAGC-AAGGTGCTGG-AGCGCGTGAAGAGCACCGGGAAGG-CGGCGG-AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGC-TTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTGCTTAATT-AGCTAGCTTGCTTGGTTGATGTGTACTA-CTGCGTTAAGCCTGCATAGAGATGAGGTGTCTAGCTACTGTGTATATTATGGCC-ATATGTTATGTAGTACTACGTGCTTTGTTTTGGATTATTACTAAAATAGTTGCATAAAGAGAGTGAAAGCTAGAGCTGTGGCTACGTGTTCTGAATTGTGATTACGTGTACGAACTAGAAACGACACGTCTGTTGTCGATTGAATTGGTCTTTTTTGGAGCGGTAGCTAGG-CCGGGTGAAGGGGCGGGGTTAATCAATCAATTGTTTGGTTGAACCGCTAGGTAAGCTCTCTATGATGATATGAATAAAAAATCCCTGTCAGTGTCAAAAACTGTGTGGCCTTCTACCTAATCACATCTTTTGTCTAGTTGGAAAAAAAGG]

[+] EMBL AK060145             [CACCCACGAGCTATACCAAGTACTCTCTTTCTCACTCGATTGATTCAAGCAGCAAATAATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCGG TGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTGGAGGCGAGC AAGGTGCTGG AGCGCGTGAAGAGCACCGGGAAGG CGGCGG AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGC TTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTGCTTAATT AGCTAGCTTGCTTGGTTGATGTGTACTA CTGCGTTAAGCCTGCATAGAGATGAGGTGTCTAGCTACTGTGTATATTATGGCC ATATGTTATGTAGTACTACGTGCTTTGTTTTGGATTATTACTAAAATAGTTGCATAAAGAGAGTGAAAGCTAGAGCTGTGGCTACGTGTTCTGAATTGTGATTACGTGTACGAACTAGAAACGACACGTCTGTTGTCGATTGAATTGGTC TTTTTGGAGCGGTAGCTAGG CCGGGTGAAGGGGCGGGGTTAATCAATCAATTGTTTGGTTGAACCGCTAGGTAAGCTCTCTATGATGATATGAATAAAAAATCCCTGTC                                                             ]
[+] EMBL OSS14962A            [       GAGCTATACCAAGTACTCTCTTTCTCACTCGATTGATTCAAGCAGCAAATAATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB681673             [                     ACTCTCTTTCTCACTCGATTGATTCAAGCAGCAAATAATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCGG TGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTGGAGGCGAGC AAGGTGCTGG AGCGCGTGAAGAGCACCGGGAAGG CGGCGG AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGC TTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTGCTTAATT AGCTAGCTTGCTTGGTTGATGTGTACTA CTGCGTTAAGCCTGCATAGAGATGAGGTGTCTAGCTACTGTGTATATTATGGCC ATATGTTATGTAGTACTACGTGCTTTGTTTTGGATTATTACTNAAATAGTTGCATAAAG                                                                                                                                                                                                                                                                       ]
[+] EMBL C26873               [                         TCTTTCTCACTCGATTGATTCAAGCAGCAAATAATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTTGCGGTTGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTNGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF326487             [                         TCTTTCTCACTCGATTGATTCAAGCAGCAAATAATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCGG TGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTGGAGGCGAGC AAGGTGCTGG AGCGCGTGAAGAGCACCGGGAAGG CGGCGG AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGC TTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTGCTTAATT AGCTAGCTTGCTTGGTTGATGTGTACTA CTGCGTTAA                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF303921             [                            TTCTCACTCGATTGATTCAAGCAGCAAATAATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCGG TGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTGGAGGCGAGC AAGGTGCTGG AGCGCGTGAAGA CACCGGGAAGG CGGCGG AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BU673034             [                                                                                      taCTAGCTTGTT CGAGCAA ATCA GTTGCCGGT CAGTAACAGAGA CAACCAT GGTGTATT GACAACCGCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACNCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCGG TGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTGGAGGCGAGC AAGGTGCTGG AGCGCGTGAAGAGCACCGGGAAGG CGGCGG AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGC TTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTGCTTAATT AGCTAGCTTGCTTGGTTGATGTGTACTA CTGCGTTAAGCCTGCATAGAGATGAGGTGTCTAGCTACTGTGTATATTATGGCC ATATGTTATGTAGTACTACGTGCTTTGTTT                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU078404             [                                                                                                                                                                                                                                            ATCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCGG TGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTGGAGGCGAGC AAGGTGCTGG AGCGCGTGAAGAGCACCGGGAAGG CGGCGG AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGNCCCCCGCCGGCTTTCGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB681674             [                                                                                                                                                                                                                                                                                                      CGATGCGAGGGGTGACGAGCGTGGCGG TGAACCCGAAGCAGAGCCGG TGCACGGTGACCGGGTA CGTGGAGGCGAGC AAGGTGCTGG AGCGCGTGAAGAGCACCGGGAAGG CGGCGG AGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGC TTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTGCTTAATT AGCTAGCTTGCTTGGTTGATGTGTACTA CTGCGTTAAGCCTGCATAGAGATGAGGTGTCTAGCTACTGTGTATATTATGGCC ATATGTTATGTAGTACTACGTGCTTTGTTTTGGATTATTACTAAAATAGTTGCATAAAGAGAGTGAAAGCTAGAGCTGTGGCTACGTGTTCTGAATTGTGATTACGTGTACGAACTAGAAACGACACGTCTGTTGTCGATTGAATTGGTCTTTTTTGGAGCGGTAGCTAGG CCGGGTGAAGGGGCGGGGTTAATCAATCAATTGTTTGGTTGAACCGCTAGGTAAGCTCTCTATGATGATATGAATAAAAAATCCCTGTCAGTGTCATGTACTGTGTGGCCTTCTACCTAATCACATCTTTTGTCTAGTTGGAAAAAAAGG]
[+] EMBL AU078405             [                                                                                                                                                                                                                                                                                                                             GCGG TGAACCCGAAGCAGAGCCGGTTGCACGGTGACCGGGTACCTTGGAGGCGAGCAAAGTTGCTGGAAGCGCNTGAAGAGCACCGGGAAGGCCGGCGGAAGATGTGGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGC TTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTGCTTAATT AGCTAGCTTGCCTGGTTGATGTGTACTA CTGCGTTAAGCCTGCATAGAGATGAGGTGTCTAGCTACTGTGTATATTATGGCC ATATGTTATGTAGTA TACGTGCTTTGTTTTGGATTATTACTAAAATAGTTGCATAAAGAGAGTGAAAGCTAGAGCTGTGGCTACGTGTTCTGAATTGTGATTACGTGTACGAACTAGAAACGACACGTCTGTTGTCGATTGAATTGGTCTTTTTTGGAGCGGTAGCTAGG CCGGGTGAAGGGGCGGGGTTAATCAATCAATTGTTTGGTTGAACCGCTAGGTAAGCTCTCTATGATGATATGAATAAAAAATCCCTGTCAGTGTCAAAAA                                                  ]
[-] EMBL OS31678              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGTATACTACAACTCC GCGACTTCT CGGCCGGCCGGCAACATGCTTGCTTAATTCAGCTAGCTTGCTTGGTTGATGTGTACTACCTGCGTTAAGCCTGCATAGAGATGAGGTGTCTAGCTACTGTGTATATTATGGCC ATATGTTATGTAGTACT CGTGCTTTGTTTTG                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU075520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGGCCAATATGTTATGTAGTACTACGTGCTTTGTTTTGGATTATTACTAAAATAGTTGCATAAAGAGAGTGAAAGCTAGAGCTGTGGCTACGTGTTCTGAATTGTGATTACGTGTACGAACTAGAAACGACACGTCTGTTGTCGATTGAATTGGTCTTTTTTGGAGCGGTAGCTAGGCCCGGGTGAAGGGGCGGGGTTAATCAATCAATTGTTTGGTTGAACCGCTAGGTAAGCTCTCTATGATGATATGAATAAAAAATCCCTGTCAGTGTCAAAAAaaaaa                                             ]




>consensus_12977#0
CACCCACGAGCTATACCAAGTACTCTCTTTCTCACTCGATTGATTCAAGCAGCAAATAAT
TAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGCCGG
TGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGA
CAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCA
AGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGC
GAGGGGTGACGAGCGTGGCGGTGAACCCGAAGCAGAGCCGGTGCACGGTGACCGGGTACG
TGGAGGCGAGCAAGGTGCTGGAGCGCGTGAAGAGCACCGGGAAGGCGGCGGAGATGTGGC
CCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGG
CCCCCGCCGGCTTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGG
TCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAAACC
AATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGCTTG
CTTAATTAGCTAGCTTGCTTGGTTGATGTGTACTACTGCGTTAAGCCTGCATAGAGATGA
GGTGTCTAGCTACTGTGTATATTATGGCCATATGTTATGTAGTACTACGTGCTTTGTTTT
GGATTATTACTAAAATAGTTGCATAAAGAGAGTGAAAGCTAGAGCTGTGGCTACGTGTTC
TGAATTGTGATTACGTGTACGAACTAGAAACGACACGTCTGTTGTCGATTGAATTGGTCT
TTTTTGGAGCGGTAGCTAGGCCGGGTGAAGGGGCGGGGTTAATCAATCAATTGTTTGGTT
GAACCGCTAGGTAAGCTCTCTATGATGATATGAATAAAAAATCCCTGTCAGTGTCAAAAA
CTGTGTGGCCTTCTACCTAATCACATCTTTTGTCTAGTTGGAAAAAAAGG
clustalw multiple alignements is not computed in this case