These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12983#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1780 fasta sequence [GNGNCAGNGCTGGTAGAACGGNTCACCTCACCNATNAAGCCTCCNCCTCCTCCTTCGCCTCCNTNTCCACCTCTCCTCTCCTCTTCCTCTTCTTCCTCCTCC-TGGGGCCTAGCCGCCTAGGGGGGTTGTGGCCTGCGACTGCGACTTCTTCCTCTGCCTTCTGCTCTCTGCCTCTGAGTATATGGAATATGGTGTGTGCGTGAAGAGAAATTAAGTGAGGGAGGGGAAAGCGAGCGAACAGGGCAACAATGGGGCAAATGGACGGCGGCGACGGCGGCGGCGGCGGCCACCCCTACCACTACCAGGCTCTCCTGGCCGCCGTCCACCAGCAGACCGTCCCCTTTCCCAATCCCTTCCCCGCCCCCTCCTCCGGAGCCGAGCCCCCCCACCCGCACAATCACAACCACAACCACAATCACAACCACTATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTTGTCACACTCCCACTCCCACTCCCACTCACATAGGTTTCGCCGACTGGAACGCCTCCACCAGCGCCTTCACCTCCCTTGCCGCGCACTCTTCTACTGCCCCCAGCAATGCCATTCACTACAGCTTCTCCCCCTGCTATGCCTTCTGGACACATTACATGCTCAAAAAGAACGCCTACCCCACCTCCTTCCCTGCGCCACACGACGACCACCTGCGCCTTGCCAACAACAATCATCCTAGAGACGCACCAGGTCCTGCATCCAGCTACGGGGTCGAGTCTTTTACTTCACCGTCCATGGCACCGAATATTTGCACCCACATGCCTCCCATAGAAGGACCCATATCTGCCAAGGAAGATAAGAAACCAGAGATTTTGCCTAGAGTGGTTAAGAGCAGTGATGAATTGGAAACCAGAAACAGCAATGTTGAATTTCACTCTGAGACAGTTGGTACTTTCCCTGAGTCGAAGCAAGGCCATGACAGTCGTGCTACTAAACTACTCAACTCGGGAGAATACCAAGTCATTCTGCGCAAGGAGCTGACAAAGAGTGATGTTGGAAATGTTGGAAGAATTGTGCTACCCAAGAAGGATGCAGAGGCTAGTCTTCCACCTTTGTTGCAAAGGGATCCTTTGATACTGCACATGGACGACATGGTGCTCCCAGTGACA-TGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTATCTACAAAAACTTGGCTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGCAGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCA-ACAGTGTTAGTTGATGC-ATTTGAAGGGA-AGG-ACGTGGACTTACCATAAGTTGGCAATCCAGG-AGAAGTTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCACCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGACCTGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAGATTGGTAGAGTATTGGAAGTGTTG-GCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTG-ACTTGTAGTTTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTG-GATCTATAAGATAAAAGAGAGT-GGTGTGTGATTTTGCTTTTGATGTCATCCATCTATTTCTCATACTAATGCCAGGAATGTCTGTT] [+] EMBL OSS10532A [GNGNCAGNGCTGGTAGAACGGNTCACCTCACCNATNAAGCCTCCNCCTCCTCCTTCGCCTCCNTNTCCACCTCTCCTCTCCTCTTCCTCTTCTTCCTCCTCC TGGGGCCTAGCCGCCTAGGGGGGTTNTGGCCTGCAACTGCAACTTCTTCCTCTGCCTTCTGCTCTCTGCCTCTAAGTATATGGAATATGGTGTGTGCGTNAAGAGAAATTAAGTNAGGGAGGGGAAAGCNAGCNAACAGGGCAACAATGGGGCAAATGGACGGCGGCGACGGCGGCGNCGGCGGCCACCCCTACCACTACCAGGCTCTCCTGGCCGCGGTCCACCAGCAGACCGTCCCCT ] [+] EMBL CB676683 [ gTCACCTCACCACCTTCGCCTCCGCCTCCTCCTTCGCCTCCGTCTCCACCTCTCCTCTCCTCTTCCTCTTCTTTCTCCCCCAAGAGGCCTAGCCGCCTTTGGGGGTTGTGGCCTGCGACTGCGACTTCTTCCTCTGCCTTCTGCTCTCTGCCTCTGAGTATATGGAATATGGTGTGTGCGTGAAGAGAAATTAAGTGAGGGAGGGGAAAGCGAGCGAACAGGGCAACAATGGGGCAAATGGACGGCGGCGACGGCGGCGGCGGCGGCCACCCCTACCACTACCAGGCTCTCCTGGCCGCCGTCCACCAGCAGACCGTCCCCTTTCCCAATCCCTTCCCCGCCCCCTCCTCCGGAGCCGAGCCCCCCCACCCGCACAATCACAACCACAACCACAATCACAACCACTATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTTGTCACACTCCCACTCCCACTCCCACTCACATAGGTTTCGCCGACTGGAACGCCTCCACCAGCGCCTTCACCTCCCTTGCCGCGCACTCTTCTACTGCCCCCAGCAATGCCATTCACTACAGCTTCTCCCCCTGCTATGCCTTCTGGACACATTACATGCTCAAAAAGAACGCCTACCCCACCTCCTTCCCTGCGCCACATGACGACCACCTG ] [+] EMBL AK107456 [ CTCCTCC TGGGGCCTAGCCGCCTAGGGGGGTTGTGGCCTGCGACTGCGACTTCTTCCTCTGCCTTCTGCTCTCTGCCTCTGAGTATATGGAATATGGTGTGTGCGTGAAGAGAAATTAAGTGAGGGAGGGGAAAGCGAGCGAACAGGGCAACAATGGGGCAAATGGACGGCGGCGACGGCGGCGGCGGCGGCCACCCCTACCACTACCAGGCTCTCCTGGCCGCCGTCCACCAGCAGACCGTCCCCTTTCCCAATCCCTTCCCCGCCCCCTCCTCCGGAGCCGAGCCCCCCCACCCGCACAACCACAACCACAACCACAATCACAACCACAATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTTGTCACACTCCCACTCCCACTCCCACTCCCAGAGGTTTCGCCGACTGGAGCGCCTCCACCAGCGCCTTCACCTCCCTTGCCGCGCACTCTTCTACTGCCCCCAGCAATGCCGTTCACTACAGCTTCTCCCCCTGCTATGCCTTCTGGACACATTACATGCTCAACAAGAACGCCTACCCCACCTCCTTCCCTGCGCCACACGACGACCACCTGCGCCTTGCCAACAACAATCATCCTAGAGACGCACCAGGTCCTGCATCCAGCTACGGGGTCGAGTCTTTTACTTCACCGTCCATGGCACCGAATATTTGCACCCACATGCCTCCCATAGAAGGACCCATATCTGCCAAGGAAGATAAGAAACCAGAGATTTTGCCTAGAGTGGTTAAGAGCAGTGATGAATTGGAAACCAGAAACAGCAATGTTGAATTTCACTCTGAGACAGTTGGTACTTTCCCTGAGTCGAAGCAAGGCCATGACAGTCGTGCTACTAAACTACTCAACTCGGGAGAATACCAAGTCATTCTGCGCAAGGAGCTGACAAAGAGTGATGTTGGAAATGTTGGAAGAATTGTGCTACCCAAGAAGGATGCAGAGGCTAGTCTTCCACCTTTGTTGCAAAGGGATCCTTTGATACTGCACATGGACGACATGGTGCTCCCAGTGACA TGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTATCTACAAAAACTTGGCTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGCAGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCA ACAGTGTTAGTTGATGC ATTTGAAGGGA AGG ACGTGGACTTACCATAAGTTGGCAATCCAGG AGAAGTTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCACCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGACCTGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAGATTGGTAGAGTATTGGAAGTGTTG GCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTG ACTTGTAGTTTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTG GATCTATAAGATAAAAGAGAGT GGTGTGTGATTTTGCTTTTGATGTCATCCATCTATTTCTCATACTAATGCCAGGAATGTCTGTT] [+] EMBL CF309657 [ CCTACCCCACCTCCTTCCCTGCGCCACACGACGACCACCTGCGCCTTGCCAACAACAATCATCCTAGAGACGCACCAGGTCCTGCATCCAGCTACGGGGTCGAGTCTTTTACTTCACCGTCCATGGCACCGAATATTTGCACCCACATGCCTCCCATAGAAGGACCCATATCTGCCAAGGAAGATAAGAAACCAGAGATTTTGCCTAGAGTGGTTAAGAGCAGTGATGAATTGGAAACCAGAAACAGCAATGTTGAATTTCACTCTGAGACAGTTGGTACTCTCCCTGAGTCGAAGCAAGGCCATGACAGTCGTGCTACTAAACTACTCAACTCAGGAGAATACCAAGTCATTCTGCGCAAGGAGCTGACAAAGAGTGATGTTGGAAATGTTGGAAGAATTGTGCTACCCAAGAAGGATGCAGAGGCTAGTCTTCCACCTTTGTTGCAAAGGGATCCTTTGATACTGCACATGGACGACATGGTGCTCCCAGTG CATTGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGG ] [-] EMBL CB676684 [ GTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTATCTACAAAAACTTGGCTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGCAGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCA ACAGTGTTAGTTGATGC ATTTGAAGGGA AGG ACGTGGACTTACCATAAGTTGGCAATCCAGG AGAAGTTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCACCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGACCTGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAGATTGGTAGAGTATTGGAAGTGTTG GCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAAGTCAGTTATGTTGGGGAGCTTG ACTTGTAGTTTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTGAAAGGTATAAGATAAAAGAGA ] [+] EMBL BI806670 [ cctctgAGATGCATTTGGGGTTAATTGCATACAGTGTTA TTGATGCTATTTGAAGGGATAGGTACGTGGACTTACCATAAGTTGGCTATCCTGGTAGAA TTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCACCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGACCTGTTNAACTCTGAATGAATGAGGACGAAAAAAAGACAAGATTGGTAGAGTATTGGAAGTCCCGTGCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGTACTTGTAGTTTTCAGAACAATATA TTGCAGCTTCTGTAAATNGTTTTG GATCTATAAGATAAAAGAGACTCGGTGTGTGATTTaaa ] consensusID : consensus_12983#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 673 fasta sequence [ACCTTTGTTCAAAGGGATCTTTGATACTGCACATGGACGACATGGTGCTCCCAGTGACATGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTATCTACAAAAACTTGGCTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGCAGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCAACAGTGTTAGTTGATGCATTTGAAGGGAAGGACGTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCCCCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGACCTGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAAAGATTGGTAGAGTATTGGAAGTGTTGGCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCCCTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTAGTTTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTGGATCTATAAGATAAAAGAG-AGTGGTGTGTGACTTTGCTTTTAA----AAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA759379 [ACCTTTGTTCAAAGGGATCTTTGATACTGCACATGGACGACATGGTGCTCCCAGTGACATGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTATCTACAAAAACTTGGCTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGCAGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCAACAGTGTTAGTTGATGCATTTGAAGGGAAGGACGTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCCCCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGACCTGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAAAGATTGGTAGAGTATTGGAAGTGTTGGCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCCCTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTAGTTTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTGGATCTATAAGATAAAAGAG AGTGGTGTGTGACTTTGCTTTTAA AAAAAAAAAAAAA ] [-] EMBL CF309658 [ CTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGCAGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCACCAGTGTTAGTTGATGCATTTGAAGGGAAGGACGTGGACTTCCCATAAGTTGGCAATCCAGGAGAAGTTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCCCCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGCCCTGTTTAACTTTGAATGAATGAGGCCGGAAAAAAGCC AAGATTGGTAGAGTATTGGAAGTGTTGGCAATGGGCTTTTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTAGTTTTCAGACCAATATATTTGCAGCTTCTGTAAATATTTTTGGATCTATAAGATAAAAGAGAAGTGGTGTGTGATTTTGCTTTTGATGTCAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_12983#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 623 fasta sequence [ATTTTCTGAAGNCCANCNTGGTTCCTTCNAGNCTGGGGGGATGTCCNTNCATTNATCCTACAAAAAACCTTGGCCTCCTGGCCAAATTTTAATATTCCCGAGNAGGAGNAGNCCCATTNCATCCAGCCAGACCNACNAAATCCCCCTAGATGCCATTTTGGGGGTTTAATTTGCAACAGTGNTTAGTTGATGCCATTTGAAGGGGAAGGNACCNTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAAGTGTCATTCGATNTTTTATATCACTGGTGGCCACCATCACATGGACNAAGATTAAAGCNCATGCAGCTTGGACCTGGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAGATTGGTAGAGTATTGGAAGTGTTGGCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTNNNNTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTGGATCTATAAGATAAAAGAGAGTGGTGTGTGATTTTGCTTTTGATGTCATCCATCTATTTCTCATACTAATGCCAGGAATGTCTGTTCATTGTCAAAAAAAAAA] [+] EMBL AU032654 [ATTTTCTGAAGNCCANCNTGGTTCCTTCNAGNCTGGGGGGATGTCCNTNCATTNATCCTACAAAAAACCTTGGCCTCCTGGCCAAATTTTAATATTCCCGAGNAGGAGNAGNCCCATTNCATCCAGCCAGACCNACNAAATCCCCCTAGATGCCATTTTGGGGGTTTAATTTGCAACAGTGNTTAGTTGATGCCATTTGAAGGGGAAGGNACCNTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAAGTGTCATTCGATNTTTTATATCACTGGTGGCCACCATCACATGGACNAAGATTAAAGCNCATGCAGCTTGGACCTGGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAGATTGGTAGAGTATTGGAAGTGTTGGCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTNNNNTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTGGATCTATAAGATAAAAGAGAGTGGTGTGTGATTTTGCTTTTGATGTCATCCATCTATTTCTCATACTAATGCCAGGAATGTCTGTTCATTGTCAAAAAAAAAA] consensusID : consensus_12983#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 396 fasta sequence [TTCCCCGGAGAACTTGAAAGGGTCAATCAGATGTTGTATATCACTGGTGGCCACCATCACATGGCCCAAGATTAAAGCGCATCAGCTTGGACACTGTTTAACTCTGAATGATATGAGGACGATAAAAAAGCCCAAAGATTGGTAGAGTATTGGAAGTGTTGCCCATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTAATTCAGTTATGTTGGGGAGCTTGACTTGTAGTTTTCAGAACCAATATATTTGCAGCTTCTGTAAATATGTTTTGGATCTATCAGATAAAAGAGAGTGGTGTGTGATTTTGCTTTTGGATGGTCATCCATCTATTTCTCATACTAATGCCCTGAATTTCTTTTCATTTTCCAAAAAAAAAA] [+] EMBL BI798120 [TTCCCCGGAGAACTTGAAAGGGTCAATCAGATGTTGTATATCACTGGTGGCCACCATCACATGGCCCAAGATTAAAGCGCATCAGCTTGGACACTGTTTAACTCTGAATGATATGAGGACGATAAAAAAGCCCAAAGATTGGTAGAGTATTGGAAGTGTTGCCCATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTAATTCAGTTATGTTGGGGAGCTTGACTTGTAGTTTTCAGAACCAATATATTTGCAGCTTCTGTAAATATGTTTTGGATCTATCAGATAAAAGAGAGTGGTGTGTGATTTTGCTTTTGGATGGTCATCCATCTATTTCTCATACTAATGCCCTGAATTTCTTTTCATTTTCCAAAAAAAAAA] consensusID : consensus_12983#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence [AAGAGAAATTAAGTGAGGGAGGGGAAAGCGAGCGAACAGGGCAACAATGGGGCAAATGGACGGCGGCGCCTCACGCAGCAGACCGTCCCCTTTCCCAATCCCTTCCCCGCCCCCTCCTCCGGAGCCGAGCCCCCCCACCCGCACAACCACAACCACAACCACAATCACAACCACAATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTTGTCACACTCCCACTCCCACTCCCACTCCCAGAGGTTTCGCCGACTTGGGGCGCTCCANCAGCGCTTNAA] [+] EMBL OSS13103A [AAGAGAAATTAAGTGAGGGAGGGGAAAGCGAGCGAACAGGGCAACAATGGGGCAAATGGACGGCGGCGCCTCACGCAGCAGACCGTCCCCTTTCCCAATCCCTTCCCCGCCCCCTCCTCCGGAGCCGAGCCCCCCCACCCGCACAACCACAACCACAACCACAATCACAACCACAATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTTGTCACACTCCCACTCCCACTCCCACTCCCAGAGGTTTCGCCGACTTGGGGCGCTCCANCAGCGCTTNAA] consensusID : consensus_12983#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 240 fasta sequence [CGTACCCATAAGTTGGCAACATTCCCGGAGAAGTTGAAAAAGTGTCAATCGATTGTTTGATATACAACTTGGTGGGCACCACACAATCACCATGGACACAAGGATTGTAAGCGCATCAGCTTGGACACCCTTTAACTCTTGAATGAATGAGGCGACAACAAGACCCAAAGATTGGTAGAGTATTGGAAGTGTTGGCCATCGGGCTTCTACAGCATCTATCTTGGGTTGAGAAAACCCTTG] [+] EMBL BI809252 [CGTACCCATAAGTTGGCAACATTCCCGGAGAAGTTGAAAAAGTGTCAATCGATTGTTTGATATACAACTTGGTGGGCACCACACAATCACCATGGACACAAGGATTGTAAGCGCATCAGCTTGGACACCCTTTAACTCTTGAATGAATGAGGCGACAACAAGACCCAAAGATTGGTAGAGTATTGGAAGTGTTGGCCATCGGGCTTCTACAGCATCTATCTTGGGTTGAGAAAACCCTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 GNGNCAGNGCTGGTAGAACGGNTCACCTCACCNATNAAGCCTCCNCCTCCTCCTTCGCCT 60 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 CCNTNTCCACCTCTCCTCTCCTCTTCCTCTTCTTCCTCCTCCTGGGGCCTAGCCGCCTAG 120 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 GGGGGTTGTGGCCTGCGACTGCGACTTCTTCCTCTGCCTTCTGCTCTCTGCCTCTGAGTA 180 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 TATGGAATATGGTGTGTGCGTGAAGAGAAATTAAGTGAGGGAGGGGAAAGCGAGCGAACA 240 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 GGGCAACAATGGGGCAAATGGACGGCGGCGACGGCGGCGGCGGCGGCCACCCCTACCACT 300 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 ACCAGGCTCTCCTGGCCGCCGTCCACCAGCAGACCGTCCCCTTTCCCAATCCCTTCCCCG 360 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 CCCCCTCCTCCGGAGCCGAGCCCCCCCACCCGCACAATCACAACCACAACCACAATCACA 420 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 ACCACTATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTT 480 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 GTCACACTCCCACTCCCACTCCCACTCACATAGGTTTCGCCGACTGGAACGCCTCCACCA 540 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 GCGCCTTCACCTCCCTTGCCGCGCACTCTTCTACTGCCCCCAGCAATGCCATTCACTACA 600 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 GCTTCTCCCCCTGCTATGCCTTCTGGACACATTACATGCTCAAAAAGAACGCCTACCCCA 660 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 CCTCCTTCCCTGCGCCACACGACGACCACCTGCGCCTTGCCAACAACAATCATCCTAGAG 720 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 ACGCACCAGGTCCTGCATCCAGCTACGGGGTCGAGTCTTTTACTTCACCGTCCATGGCAC 780 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 CGAATATTTGCACCCACATGCCTCCCATAGAAGGACCCATATCTGCCAAGGAAGATAAGA 840 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 AACCAGAGATTTTGCCTAGAGTGGTTAAGAGCAGTGATGAATTGGAAACCAGAAACAGCA 900 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 ATGTTGAATTTCACTCTGAGACAGTTGGTACTTTCCCTGAGTCGAAGCAAGGCCATGACA 960 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 GTCGTGCTACTAAACTACTCAACTCGGGAGAATACCAAGTCATTCTGCGCAAGGAGCTGA 1020 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ------------------------------------------------------------ consensus_12983#0 CAAAGAGTGATGTTGGAAATGTTGGAAGAATTGTGCTACCCAAGAAGGATGCAGAGGCTA 1080 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ------------------------------------------------------------ consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 ---------ACCTTTGTTCAAAGGGATCTTTGATACTGCACATGGACGACATGGTGCTCC 51 consensus_12983#0 GTCTTCCACCTTTGTTGCAAAGGGATCCTTTGATACTGCACATGGACGACATGGTGCTCC 1140 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 ----------------------------------ATTTTCTGAAGNCCANCNTGGTTCCT 26 consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 CAGTGACATGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTC 111 consensus_12983#0 CAGTGACATGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTC 1200 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 TCNAGNCTGGGGGGATGTCCNTNCATTNATCCTACAAAAAACCTTGGCCTCCTGGCCAAA 86 consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 TGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTA 171 consensus_12983#0 TGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTA 1260 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 TTTTAATATTCCCGAGNAGGAGNAGNCCCATTNCATCCAGCCAGACCNACNAAATCCCCC 146 consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 TCTACAAAAACTTGGCTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGC 231 consensus_12983#0 TCTACAAAAACTTGGCTCCTGGCAAATTTATTATCCGAGGAGAGAAGGCCATTCATCAGC 1320 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 TAGATGCCATTTTGGGGGTTTAATTTGCAACAGTGNTTA----GTTGATGCCATTTGAAG 202 consensus_12983#3 ------------------------------------------------------------ consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 AGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCAACAGTGTTAGTTGATGCATTTG 291 consensus_12983#0 AGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCAACAGTGTTAGTTGATGCATTTG 1380 consensus_12983#4 --------------------------------------------------AAGAGAAATT 10 consensus_12983#2 GGGAAGGNACCNTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAAGTG--TCA 260 consensus_12983#3 --------------------------------TTCCCCGGAGAACTTGAAAGGGT--CAA 26 consensus_12983#5 ------------CGTACCCATAAGTTGGCAACATTCCCGGAGAAGTTGAAAAAGTGTCAA 48 consensus_12983#1 AAGGGAAGGACGTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAGTGT---CA 348 consensus_12983#0 AAGGGAAGGACGTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAGTGT---CA 1437 consensus_12983#4 AAGTGAGGGAGGGGAAAGCGAGCGAACAGGGCAACAATGGGGCAAATGGACGGCGGCGCC 70 ** * * ** * consensus_12983#2 TTCGATNTTTTAT-AT-CA--CTGGTGGCCACCA-----TCAC-ATGGACN--AAGATTA 308 consensus_12983#3 TCAGATGTTGTAT-AT-CA--CTGGTGGCCACCA-----TCAC-ATGGCCC--AAGATTA 74 consensus_12983#5 TCGATTGTTTGAT-ATACAACTTGGTGGGCACCACACAATCACCATGGACACAAGGATTG 107 consensus_12983#1 TCGATT--TTTAT-AT-CA--CTGGTGGCCCCCA-----TCAC-ATGGACA--AAGATTA 394 consensus_12983#0 TCGATT--TTTAT-AT-CA--CTGGTGGCCACCA-----TCAC-ATGGACA--AAGATTA 1483 consensus_12983#4 TCACGCAGCAGACCGTCCCCTTTCCCAATCCCTTC---CCCGCCCCCTCCTCCGGAGCCG 127 * * * * * * * * * * consensus_12983#2 -AAGCNCATGCAGCTTGGACCTGGTTTAACTCT-GAATGA-ATGAGGACGAAAAAAAGAC 365 consensus_12983#3 -AAGCGCAT-CAGCTTGGACACTGTTTAACTCT-GAATGATATGAGGACGATAAAAAAGC 131 consensus_12983#5 TAAGCGCAT-CAGCTTGGACACCCTTTAACTCTTGAATGA-ATGAGG-CGACAACAAGAC 164 consensus_12983#1 -AAGCGCATGCAGCTTGGAC-CTGTTTAACTCT-GAATGA-ATGAGGACGAAAAAAAGAC 450 consensus_12983#0 -AAGCGCATGCAGCTTGGAC-CTGTTTAACTCT-GAATGA-ATGAGGACGAAAAAAAGAC 1539 consensus_12983#4 --AGCCCCCCCA-CCCGCAC-AACCACAACCAC--AACCA--CAATCACAACCACAATAT 179 *** * ** * * ** *** ** * * * * * ** consensus_12983#2 ---AAGATTGGTAGAGTATTGGAAGTGTTGGCAAT-GGGCTTCTACAGC--TTATCTTGG 419 consensus_12983#3 CCAAAGATTGGTAGAGTATTGGAAGTGTTGCCCAT-GGGCTTCTACAGC--TTATCTTGG 188 consensus_12983#5 CCAAAGATTGGTAGAGTATTGGAAGTGTTGGCCATCGGGCTTCTACAGCATCTATCTTGG 224 consensus_12983#1 A-AAAGATTGGTAGAGTATTGGAAGTGTTGGCAAT-GGGCTTCTACAGC--TTATCTTGG 506 consensus_12983#0 ---AAGATTGGTAGAGTATTGGAAGTGTTGGCAAT-GGGCTTCTACAGC--TTATCTTGG 1593 consensus_12983#4 TC-ACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCT-CACC---CTTGTCAC 234 * *** * * * * * ** *** ** ** * * * consensus_12983#2 GTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTNN 479 consensus_12983#3 GTTGAGAAAAGCACTTGTCAGTTTATT-AATTCAGTTATGTTGGGGAGCTTGACTTGTAG 247 consensus_12983#5 GTTGAGAAAA-CCCTTG------------------------------------------- 240 consensus_12983#1 GTTGAGAAAAGCCCTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTAG 566 consensus_12983#0 GTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTAG 1653 consensus_12983#4 ACTCCCACTCCCACTC-CCACTCCCAGAGGTTTCGCCGACTTGGGGCGCTCCANCAGCGC 293 * * * ** consensus_12983#2 NNTTCAGAAC-AATATATTTGCAGCTTCTGTAAATAT-TTTTGGATCTATAAGATAAAAG 537 consensus_12983#3 TTTTCAGAACCAATATATTTGCAGCTTCTGTAAATATGTTTTGGATCTATCAGATAAAAG 307 consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 TTTTCAGAAC-AATATATTTGCAGCTTCTGTAAATAT-TTTTGGATCTATAAGATAAAAG 624 consensus_12983#0 TTTTCAGAAC-AATATATTTGCAGCTTCTGTAAATAT-TTTTGGATCTATAAGATAAAAG 1711 consensus_12983#4 TTNAA------------------------------------------------------- 298 consensus_12983#2 AGAGTGGTGTGTGATTTTGCTTTTGAT--GTCATCCATCTATTTCTCATACTAATGCCAG 595 consensus_12983#3 AGAGTGGTGTGTGATTTTGCTTTTGGATGGTCATCCATCTATTTCTCATACTAATGCCCT 367 consensus_12983#5 ------------------------------------------------------------ consensus_12983#1 AGAGTGGTGTGTGACTTTGCTTTTAAAAAAAAAAAAAAAAAAAAAAAAA----------- 673 consensus_12983#0 AGAGTGGTGTGTGATTTTGCTTTTGAT--GTCATCCATCTATTTCTCATACTAATGCCAG 1769 consensus_12983#4 ------------------------------------------------------------ consensus_12983#2 GAATGTCTGTTCATTGTCAAAAAAAAAA- 623 consensus_12983#3 GAATTTCTTTTCATTTTCCAAAAAAAAAA 396 consensus_12983#5 ----------------------------- consensus_12983#1 ----------------------------- consensus_12983#0 GAATGTCTGTT------------------ 1780 consensus_12983#4 ----------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||