These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12998#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1560 fasta sequence [CACGCACCGGAGCGAGAAGAAGAAGAACCCAATCATTTCCCTCCCTCCCTCCCACCGTCGTCTCGTCGCGAACCCGCGAGAATCCCAACCTCCTCCTCCGCTTTCCCTCCTTTCTCCTTCCCACCCGCGCTACCGAGCAGAGCACTGCTTGGCTCGGCTGGCTCTTGCGGTTCGAGGTCAGTCGCCTGGCGCCGCGCGCGGCGGGCGAGGGGGTCGGTTGATGGTGCCATGTGGCCCCTGGGGTTCTTCTCCGAGAGGCTGTTCAAGGTCGCGGGGGAAGGGGACGGCGGCGAGGGGGCGGACGACTCGCCGCCGGCCCCTGACGGCCGTGTCCCTCTAGCCCGCCGCTCGTACTACGTCGATGTTCCGCATGTCCAGCAGGCCTTCACGTGGGACTGCGGCCTCGCTTGCGTGCTCATGGTGCTCAGGACACTCGGGATGGATTGCTGCGACGGCATTGCCGATCTCGAGAAGCTCTGCCGCACCACGAGGTTCCTCTCTTGGACTAGATTATTACTTCAAATTTGAGTTTACAACTAAACACGGGGGGCGCAATTCTCCTTAGTTAATGAAAAAAATTGATACCCCGAATCATTTGTTTATTCATGGATAATTATTCTTCTTTTCTTTATGAGATTGCGTGGATAACGAACAGTGATTACTCTGTCAGTTCATGAATGCTTGTTACTACTTTGACCACTTGATTGTTCCCACATTTTGCACTGCATAATCACTTTTATCCGGTGTAGTTAAAATGCTCTTTGCAAATAATTCCATCTTAGGTGAAAATTAATTTGGAAGAGAATAAAAAATTGTGCATTTCAATTGTAATATGACAATTATTTATGAGGACATAAAGTAGCTTAGACGTGAGAAATATTCGTGGATATATTATATTGCAATACAATCATTCCCTAGATGAGCTGGACATAATATTTAATTCTCTTTAATTTTGGCCTATTAAAAATTTTAATAGCACGTCTGGTGTATTAACAATCTGACATTTCTGGGTTGTGCAGCATATGGACAGTTGACTTGGCATATCTGTTAAACAGGTTTTCAGTTTGTTTTTCCTTCTTCACTGTGACTCTAGGAGCAAATCCGCAATATTCTGCTGAAACCTTTTATAGGGAGCAATTGCAAGAAGACATTGATCGAGTGGATGAGCTCTTTGGCAGAG-CCTTGAAGCTGGAATTAGTATTCAATGCAGATCCATCAGTGCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGTGGACAAAACAAAATTGAAGTAAGGGATTTTTTTGGTCATAGCAAGTGAGATGAAGTATACTTTGTTCTGTATTTCTGTCAATACTTTTACTCCTTTAAGACAGTCTTACATTTGTCTTCGGCATTCAGACATCGCCTCATAAGCAAGTTGTCCAATGGTAAATGCAAT--GG-GTGGACAATGTTAC-TTGCTGTACTT-GTCTCATTTT-AATATCTCAAATTCTTT-TGATTTAACGGTCATAAGGTGATTATTAGTTTAATATTTTGCAACCGTGCCAACATTATGTA] [+] EMBL AK102175 [CACGCACCGGAGCGAGAAGAAGAAGAACCCAATCATTTCCCTCCCTCCCTCCCACCGTCGTCTCGTCGCGAACCCGCGAGAATCCCAACCTCCTCCTCCGCTTTCCCTCCTTTCTCCTTCCCACCCGCGCTACCGAGCAGAGCACTGCTTGGCTCGGCTGGCTCTTGCGGTTCGAGGTCAGTCGCCTGGCGCCGCGCGCGGCGGGCGAGGGGGTCGGTTGATGGTGCCATGTGGCCCCTGGGGTTCTTCTCCGAGAGGCTGTTCAAGGTCGCGGGGGAAGGGGACGGCGGCGAGGGGGCGGACGACTCGCCGCCGGCCCCTGACGGCCGTGTCCCTCTAGCCCGCCGCTCGTACTACGTCGATGTTCCGCATGTCCAGCAGGCCTTCACGTGGGACTGCGGCCTCGCTTGCGTGCTCATGGTGCTCAGGACACTCGGGATGGATTGCTGCGACGGCATTGCCGATCTCGAGAAGCTCTGCCGCACCACGAGGTTCCTCTCTTGGACTAGATTATTACTTCAAATTTGAGTTTACAACTAAACACGGGGGGCGCAATTCTCCTTAGTTAATGAAAAAAATTGATACCCCGAATCATTTGTTTATTCATGGATAATTATTCTTCTTTTCTTTATGAGATTGCGTGGATAACGAACAGTGATTACTCTGTCAGTTCATGAATGCTTGTTACTACTTTGACCACTTGATTGTTCCCACATTTTGCACTGCATAATCACTTTTATCCGGTGTAGTTAAAATGCTCTTTGCAAATAATTCCATCTTAGGTGAAAATTAATTTGGAAGAGAATAAAAAATTGTGCATTTCAATTGTAATATGACAATTATTTATGAGGACATAAAGTAGCTTAGACGTGAGAAATATTCGTGGATATATTATATTGCAATACAATCATTCCCTAGATGAGCTGGACATAATATTTAATTCTCTTTAATTTTGGCCTATTAAAAATTTTAATAGCACGTCTGGTGTATTAACAATCTGACATTTCTGGGTTGTGCAGCATATGGACAGTTGACTTGGCATATCTGTTAAACAGGTTTTCAGTTTGTTTTTCCTTCTTCACTGTGACTCTAGGAGCAAATCCGCAATATTCTGCTGAAACCTTTTATAGGGAGCAATTGCAAGAAGACATTGATCGAGTGGATGAGCTCTTTGGCAGAGCCCTTGAAGCTGGAATTAGTATTCAA ATCCATCAGTGCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGTGGACAAAACAAAATTGAAGTAAGGGATTTTTTTGGTCATAGCAAGTGAGATGAAGTATACTTTGTTCTGTATTTCTGTCAATACTTTTACTCCTTTAAGACAGTCTTACATTTGTCTTCGGCATTCAGACATCGCCTCATAAGCAAGTTGTCCAATGGTAAATGCAAT GG GTGGACAATGTTAC TTGCTGTACTT GTCTCATTTT AATATCTCAAATTCTTT TGATTTAACGATCATAAGGTGATTATTAGTTTAATATTTTGCAACCGTGCCAACATTATGTA] [+] EMBL CB641855 [ CCCTCCCTCCCACCGTCGTCTCGTCGCGAACCCGCGAGAATCCCAACCTCCTCCTCCGCTTTCCCTCCTTTCTCCTTCCCACCCGCGCTACCGAGCAGAGCACTGCTTGGCTCGGCTGGCTCTTGCGGTTCGAGGTCAGTCGCCTGGCGCCGCGCGCGGCGGGCGAGGGGGTCGGTTGATGGTGCCATGTGGCCCCTGGGGTTCTTCTCCGAGAGGCTGTTCAAGGTCGCGGGG ] [+] EMBL C73753 [ CATTGATCGAGTGGATGAGCTCTTTGGCAGAG CCTTGAAGCTGGAATTAGTATTCAATGCAGATCCATCAGTGCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGTGGACAAAACAAAATTGAAGTAAGGGATTTTTTTGGTCATAGCAAGTGAGATGAAGTATACTTTGTTCTGTATTTCTGTCAATACTTTTACTCCTTTAAGACAGTCTTACATTTGTCTTCGGCATTCAGACATCGCCTCATAAGCAAGTTGTCCAATGGTAAATGCAATGGGG GTGGACAATGTTAC TTGCTGTACTN GTCTCATTTT AATATCTCAAATTCTTTNTGATTTAACGGTCATAAGGTGATTATTAGTTTAATATTTTGC ] [+] EMBL C73950 [ ATTGATCGAGTGGATGAGCTCTTTGGCAGAG CCTTGAAGCTGGAATTAGTATTCAATGCAGATCCATCAGTGCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGTGGACAAAACAAAATTGAAGTAAGGGATTTTTTTGGTCATAGCAAGTGAGATGAAGTATACTTTGTTCTGTATTTCTGTCAATACTTTTACNCCTTTAAGACAGTCTTACATTTGTCTTCGGCATTCAGACATCGCCTCATAAGCAAGTTGTCCAATGGTAAATGCAAT GGNGTGGNCAATGTTACTTTGCTGTACTTGGTCTCATTTTNAATATCTCAAATCCTTT TGATTTAACGGNCAT AGGTGATTATTAGTTTAATA TTTNCACCCG GCC ACATTnt ] consensusID : consensus_12998#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 816 fasta sequence [CAGTGCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGTGGACAAAACAAAATTGAATTCCTCATGGAGCAATGATCTACAAGATATGCAACAGTTCAGTGAGGATTCAGATTACATGGGGCATTATGTTGTAATATGTGGGTATGATGCTGATGCTTGCGAATTTGAGATAAGGGACCCTGCCAGTTCGAGACAGCGTGAAAGGGTGTCAATGAAGAGCTTAGATCAGGCCCGCAAGTCCTTTGGAACTGATGAGGATATTATTTTGGTTTCTTTAACTGGAAAAATTGGAATGAAGCTCTCACGTAAACTCCTGGTGGGCTCCTTGTGAAAACCTCAACTCCCTGGTTCCATGTGTATATACGTTGTACATGCCACTGTAGTTATGATTGTCATCTGTTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAGCTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATGGCTCATCACA-CTGAAGCTGCAAAGGACGCAGCAGGCAGCAGCAACAATGCTGCGCAGGAACTACTCTTGTAAGCAAGAGCAGCTTCTGTAGCGAGCAAAAGTCATACCGTTATAGCCGGACAGAGATGTATCATATGTACA-TATATCCTTGCATCTGTGGCCATGTGTATCCTACTCCCTGAATCCTCTTCTGTAAATTCCAAACCATCTCGCGTGCTCGCCTGCCTTTCTCTGAATGATTCTTAATGCAATGTAAGAAGGGATGTTGCCCGCGTATGGGTGTGTTTAGTTCACGCTAAATAAAAAGGA] [+] EMBL CB000993 [CAGTGCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGTGGACAAAACAAAATTGAATTCCTCATGGAGCAATGATCTACAAGATATGCAACAGTTCAGTGAGGATTCAGATTACATGGGGCATTATGTTGTAATATGTGGGTATGATGCTGATGCTTGCGAATTTGAGATAAGGGACCCTGCCAGTTCGAGACAGCGTGAAAGGGTGTCAATGAAGAGCTTAGATCAGGCCCGCAAGTCCTTTGGAACTGATGAGGATATTATTTTGGTTTCTTTAACTGGAAAAATTGGAATGAAGCTCTCACGTAAACTCCTGGTGGGCTCCTTGTGAAAACCTCAACTCCCTGGTTCCATGTGTATATACGTTGTACATGCCACTGTAGTTATGATTGTCATCTGTTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAGCTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATGGCTCATCACA CTGAAGCTGCAAAGGACGCAGCAGGCAGCAGCAACAATGCTGCGCAGGAACTACTCTTGTAAGCAAGAGCAGCTTCTGTAGCGAGCAAAAGTCATACCGTTATAGCCGGACAGAGATGTATCATATGTACA TATAT ] [-] EMBL CB654664 [ TGCTATCGCACTAGTGGACAAAACAAAATTGAATTCCTCATGGAGCAATGATCTACAAGATATGCAACAGTTCAGTGAGGATTCAGATTACATGGGGCATTATGTTGTAATATGTGGGTATGATGCTGATGCTTGCGAATTTGAGATAAGGGACCCTGCCAGTTCGAGACAGCGTGAAAGGGTGTCAATGAAGAGCTTAGATCAGGCCCGCAAGTCCTTTGGAACTGATGAGGATATTATTTTGGTTTCTTTAACTGGAAAAATTGGAATGAAGCTCTCACGTAAACTCCTGGTGGGCTCCTTGTGAAAACCTCAACTCCCTGGTTCCATGTGTATATACGTTGTACATGCCACTGTAGTTATGATTGTCATCTGTTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAGCTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATGGCTCATCACA CTGAAGCTGCAAAGGACGCAGCAGGCAGCAGCAACAATGCTGCGCAGGAACTACTCTTGTAAGCAAGAGCAGCTTCTGTAGCGAGCAAAAGTCATACCGTTATAGCCGGACAGAGATGTATCATATGTACA TATATCCTTGCATCTGTGGCCATGTGTATCCTACTCCCTGAATCCTCTTCTGTAAATTCCAAACCATCTCGCGTGCTCGCCTGCCTTTCTCTGAATGATTCTTAATGCAATGTAAGAAGGGA AAGGCCCGCGTATGGGTGTGTTTAGTTCACGCTAAATAAAAAGGA] [-] EMBL CB641856 [ AATTCCTCATGGAGCAATGATCTACAAGATATGCAACAGTTCAGTGAGGATTCAGATTACATGGGGCATTATGTTGTAATATGTGGGTATGATGCTGATGCTTGCGAATTTGAGATAAGGGACCCTGCCAGTTCGAGACAGCGTGAAAGGGTGTCAATGAAGAGCTTAGATCAGGCCCGCAAGTCCTTTGGAACTGATGAGGATATTATTTTGGTTTCTTTAACTGGAAAAATTGGAATGAAGCTCTCACGTAAACTCCTGGTGGGCTCCTTGTGAAAACCTCAACTCCCTGGTTCCATGTGTATATACGTTGTACATGCCACTGTAGTTATGATTGTCATCTGTTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAGCTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATGGCTCATCACA CTGAAGCTGCAAAGGACGCAGCAGGCAGCAGCAACAATGCTGCGCAGGAACTACTCTTGTAAGCAAGAGCAGCTTCTGTAGCGAGCAAAAGTCATACCGTTATAGCCGGACAGAGATGTATCATATGTACA TATATCCTTGCATCTGTGGCCATGTGTATCCTACTCCCTGAATCCTCTTCTGTAAATTCCAAACCATCTCGCGTGCTCGCCTGCCTTTCTCTGAATGATTCTTAATGCAATGTAAGAAGGGATGTTGCCCGCGTATGGGTGTGTTTAGTTCACGCTAAAattgaaa ] [+] EMBL BM421481 [ gCTGTAGTTATGATTGTCATCTGTTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAGCTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATGGCTCATCACACCTGAAGCTGCAAAGGACGCAGCAGGCAGCAGCAACAATGCTGCGCAGGAACTACTCTTGTAAGCAAGAGCAGCTTCTGTAGCGAGC AAAGTCATACCGTTATAGCCGGACAGAGATGTATCATATGTACATTATATCCTTGCATCTGTGGCCATGTGTATCCTACTCCCTGAATCCTCTTCTGTAAATTCCAAACCATCTAGCGTGCTCGCCT CCTTTCTCTGAATGATTCTTAATGC ATGTAAGAAGGGATGTTGCCCGTGTATGGGTGTGTTTtaaaaa ] consensusID : consensus_12998#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence [CACCCCATACGCGGGCNACCTCCCTTCTTACNTTGCATTAAGAATCATTCAGAGAAAGGCAGGCGAGCACGCGAGATGGTTTGGAATTTACAGAAAANGATTCNGGGAGTNTGATACACNTGGCCACAGATGCAAGGATATATGTTCATATGATACATCTCTGTCCGGCTATAACGGTNTGACTTTTGCTCNCTACAGAANCTGCTCTTGCTTNCAANANTATTTCCNGCGCACCATTGTTNCTGCTGCCTGCTGCGTCCTTTGCAGCTTCAGTGTGATGAGCCNTGANCTNACNAACCTNACTGGGTTCTTCNCTAGCTCNCAGTTCCTATAGCTGTTAGAATGATCTTGAACTACATNCCTGACTTAACAGATNACAATCNTTACTNCCGTGGCCTGTTCNACNTTTATNCNCCTTGAACCCCNGGATTTGAAGTTTTCCCCANGANCCCCCCCCNGAATTTNCCTNAAAACCTCCCTCCCATTTTTCCCNTTTAAGAAACCCCNAATTATTTCCCCCTCCNTTCCCAAAGGAACTTGCCGGGGCCTGATCTAANCTCCTCCCTTGAACNCCCCTTTNCCCCCCTNTTCTCCCAAACTGGGCCNGG] [+] EMBL BE229824 [CACCCCATACGCGGGCNACCTCCCTTCTTACNTTGCATTAAGAATCATTCAGAGAAAGGCAGGCGAGCACGCGAGATGGTTTGGAATTTACAGAAAANGATTCNGGGAGTNTGATACACNTGGCCACAGATGCAAGGATATATGTTCATATGATACATCTCTGTCCGGCTATAACGGTNTGACTTTTGCTCNCTACAGAANCTGCTCTTGCTTNCAANANTATTTCCNGCGCACCATTGTTNCTGCTGCCTGCTGCGTCCTTTGCAGCTTCAGTGTGATGAGCCNTGANCTNACNAACCTNACTGGGTTCTTCNCTAGCTCNCAGTTCCTATAGCTGTTAGAATGATCTTGAACTACATNCCTGACTTAACAGATNACAATCNTTACTNCCGTGGCCTGTTCNACNTTTATNCNCCTTGAACCCCNGGATTTGAAGTTTTCCCCANGANCCCCCCCCNGAATTTNCCTNAAAACCTCCCTCCCATTTTTCCCNTTTAAGAAACCCCNAATTATTTCCCCCTCCNTTCCCAAAGGAACTTGCCGGGGCCTGATCTAANCTCCTCCCTTGAACNCCCCTTTNCCCCCCTNTTCTCCCAAACTGGGCCNGG] consensusID : consensus_12998#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [CGAGACTCCCAACCTCCTCCTCCGCTTTCCCTCCTTTCTCCTTCCCACCCGCGCTACCGAGCAGAGCACTGCTTGGCTCGGCTGGCTCTTGCGGTTCGAGGTCAGTCGCCTGGCGCCGCGCGCGGCGGGCGAGGGGGTCGGTTGATGGTGCCATGTGGCCCCTGGGGTTCTTCTCCGAGAGGCTGTTCAAGGTCGCGGGGGAAGGGGACGGCGGCGAGGGGGCGGACGACTCGCCGCCGGCCCCTGACGGCCGTGTCCCTCTAGCCCGCCGCTCGTACTACGTCGATGTTCCGCATGTCCAGCAGGCCTTCACGTGGGACTGCGGCCTCGCTTGCGTGCTCATGGTGCTCATGACACTCGGGATGGATTGCTGCGACGGCATTGCCGATCTCGAGAAGCTCTGCCGCACCACGAGCATATGGACAGTTGACTTGGCATATCTGTTAAACAGGTTTTCAATTTGCTTTTCCTTCTTCACTGTGACTCTAGGAGCAAATCCGCAATATTCTGCTGAAACCTTTTATAG] [+] EMBL CB654663 [CGAGACTCCCAACCTCCTCCTCCGCTTTCCCTCCTTTCTCCTTCCCACCCGCGCTACCGAGCAGAGCACTGCTTGGCTCGGCTGGCTCTTGCGGTTCGAGGTCAGTCGCCTGGCGCCGCGCGCGGCGGGCGAGGGGGTCGGTTGATGGTGCCATGTGGCCCCTGGGGTTCTTCTCCGAGAGGCTGTTCAAGGTCGCGGGGGAAGGGGACGGCGGCGAGGGGGCGGACGACTCGCCGCCGGCCCCTGACGGCCGTGTCCCTCTAGCCCGCCGCTCGTACTACGTCGATGTTCCGCATGTCCAGCAGGCCTTCACGTGGGACTGCGGCCTCGCTTGCGTGCTCATGGTGCTCATGACACTCGGGATGGATTGCTGCGACGGCATTGCCGATCTCGAGAAGCTCTGCCGCACCACGAGCATATGGACAGTTGACTTGGCATATCTGTTAAACAGGTTTTCAATTTGCTTTTCCTTCTTCACTGTGACTCTAGGAGCAAATCCGCAATATTCTGCTGAAACCTTTTATAG] consensusID : consensus_12998#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 369 fasta sequence [AACCTCAACTCCCTGGTTCCCATGTGTATATACGTTGTACATGCCCACTGTAGTTATGATTGTCCATCTGTTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAGCTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATGGCTCATCACACTGAAGCTGCAAAGGACGCAGCAGGCAGCAGCAACAATGTGCGCAGGAACTACTCTTGTAAGCAAGAGCAGCTTCTGTAGCGAGCAAAAGTCATACCGTTATAGCCGGACAGAGATGTATCATATGTACATATATCCTTGCATCTGTGGCCATGTGTATCCTACTCCCTGAATCCTCTTCTGTAAAAAAAAAAAAAAAAAAA] [+] EMBL C97873 [AACCTCAACTCCCTGGTTCCCATGTGTATATACGTTGTACATGCCCACTGTAGTTATGATTGTCCATCTGTTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAGCTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATGGCTCATCACACTGAAGCTGCAAAGGACGCAGCAGGCAGCAGCAACAATGTGCGCAGGAACTACTCTTGTAAGCAAGAGCAGCTTCTGTAGCGAGCAAAAGTCATACCGTTATAGCCGGACAGAGATGTATCATATGTACATATATCCTTGCATCTGTGGCCATGTGTATCCTACTCCCTGAATCCTCTTCTGTAAAAAAAAAAAAAAAAAAA] consensusID : consensus_12998#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 191 fasta sequence [TTCCNTCCCTCCCTCCCACCGTCGTCTCGTCGCGAACCCGCGAGAATCCCAACCTCCTCCTCCGCTTTCCCTCCTTTNTCCTTCCCACCCGCGCTACCGAGCAGAGCACTGCTTGGTTCGGCTGGNTCTTGCGGTTCGAGGTCAGTNGACTGGNGCNGNGCGGTNGGTGCNAGGGTTTCGGTTNATGGTGC] [+] EMBL OSC00432A [TTCCNTCCCTCCCTCCCACCGTCGTCTCGTCGCGAACCCGCGAGAATCCCAACCTCCTCCTCCGCTTTCCCTCCTTTNTCCTTCCCACCCGCGCTACCGAGCAGAGCACTGCTTGGTTCGGCTGGNTCTTGCGGTTCGAGGTCAGTNGACTGGNGCNGNGCGGTNGGTGCNAGGGTTTCGGTTNATGGTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12998#0 ------------------------------------------------------------ consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 CAGTGCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGT 60 consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 ------------------------------------------------------------ consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 GGACAAAACAAAATTGAATTCCTCATGGAGCAATGATCTACAAGATATGCAACAGTTCAG 120 consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 ------------------------------------------------------------ consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 TGAGGATTCAGATTACATGGGGCATTATGTTGTAATATGTGGGTATGATGCTGATGCTTG 180 consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 ------------------------------------------------------------ consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 CGAATTTGAGATAAGGGACCCTGCCAGTTCGAGACAGCGTGAAAGGGTGTCAATGAAGAG 240 consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 ---------------------------------CACGCACCGGAGCGAGAAGAAGAAGAA 27 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 CTTAGATCAGGCCCGCAAGTCCTTTGGAACTGATGAGGATATTATTTTGGTTTCTTTAAC 300 consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------CACCCCATACGCGGGCNACCTCCC 24 consensus_12998#0 CCCAATCATTTCCCTCCCTCCCTCCCACCGTCGTCTCGTCGCGAACCCGCGAGAATCCCA 87 consensus_12998#3 -------------------------------------------------CGAGACTCCCA 11 consensus_12998#5 ---------TTCCNTCCCTCCCTCCCACCGTCGTCTCGTCGCGAACCCGCGAGAATCCCA 51 consensus_12998#1 TGGAAAAATTGGAATGAAGCTCTCACGTAAACTCCTGGTGGGCTCCTTGTGAAAACCTCA 360 consensus_12998#4 -----------------------------------------------------AACCTCA 7 consensus_12998#2 TTCTTACNTTGCATTAAGAATCATTCAGAGAAAGGCAGGCGAGCACGCGAGATGGTTTGG 84 consensus_12998#0 ACCTCCTCCTC--CGCTTTCCCTCCTTTCTCCTTCCCACCCGCGCTACCGAGCAGAGCAC 145 consensus_12998#3 ACCTCCTCCTC--CGCTTTCCCTCCTTTCTCCTTCCCACCCGCGCTACCGAGCAGAGCAC 69 consensus_12998#5 ACCTCCTCCTC--CGCTTTCCCTCCTTTNTCCTTCCCACCCGCGCTACCGAGCAGAGCAC 109 consensus_12998#1 ACTCCCTGGTT--CC-ATGTGTATATACGTTGTACATGCC-ACTGTAGTTATGATTGT-C 415 consensus_12998#4 ACTCCCTGGTT--CCCATGTGTATATACGTTGTACATGCCCACTGTAGTTATGATTGT-C 64 consensus_12998#2 AATTTACAGAAAANGATTCNGGGAGTNTGATACACNTGGCCACAGATGCAAGGATATATG 144 * * * * * * * * consensus_12998#0 TGCTTGGCTCGGCTGGCTCTTGCGGTTCGAGGTCAGTCGCCTGGCGCCGCGCGCGGCGGG 205 consensus_12998#3 TGCTTGGCTCGGCTGGCTCTTGCGGTTCGAGGTCAGTCGCCTGGCGCCGCGCGCGGCGGG 129 consensus_12998#5 TGCTTGGTTCGGCTGGNTCTTGCGGTTCGAGGTCAGTNGACTGGNGCNGNGCGGTNGGTG 169 consensus_12998#1 -ATCTG--TTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAG 472 consensus_12998#4 CATCTG--TTAAGTCATGTATGTAGTTCAAGATCATTCTTACAGCTATAGGAACTGTGAG 122 consensus_12998#2 TTCATATGATACATCTCTGTCCGGCTATAACGGTNTGACTTTTGCTCNCTACAGAANCTG 204 * * * * * * consensus_12998#0 CGAGGGGGTCGGTTGATGGTGCCATGTGGCCCCTGGGGTTCTTCTCCGAGAGGCTGTTCA 265 consensus_12998#3 CGAGGGGGTCGGTTGATGGTGCCATGTGGCCCCTGGGGTTCTTCTCCGAGAGGCTGTTCA 189 consensus_12998#5 CNAGGGTTTCGGTTNATGGTGC-------------------------------------- 191 consensus_12998#1 CTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATG--GCTCATCACACTGAAGCTGCA-A 529 consensus_12998#4 CTAGTGAAGTACCCAGTTAGGTTTGTTAGCTCATG--GCTCATCACACTGAAGCTGCA-A 179 consensus_12998#2 CTCTTGCTTNCAANANTATTTCCNGCGCACCATTGTTNCTGCTGCCTGCTGCGTCCTTTG 264 * * * consensus_12998#0 AGGTCGCGGGGGAAGGGGACGGCGGCGAGGGGGCGGACGACTCGCCGCCGGCCCCTGACG 325 consensus_12998#3 AGGTCGCGGGGGAAGGGGACGGCGGCGAGGGGGCGGACGACTCGCCGCCGGCCCCTGACG 249 consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 AGGACGCAG---CAGGCAGCAGCAACAATGCTGCGCAGGAACTACT-CTTGTAAGCAAGA 585 consensus_12998#4 AGGACGCAG---CAGGCAGCAGCAACAATG-TGCGCAGGAACTACT-CTTGTAAGCAAGA 234 consensus_12998#2 CAGCTTCAG----TGTGATGAGCCNTGANCTNACNAACCTNACTGGGTTCTTCNCTAGCT 320 consensus_12998#0 GCCGTGTCCCTCTAGCCCGCCGCTCGTACTACGTCGATGTTCCGCATGTCCAGCAGGCCT 385 consensus_12998#3 GCCGTGTCCCTCTAGCCCGCCGCTCGTACTACGTCGATGTTCCGCATGTCCAGCAGGCCT 309 consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 GCAGCTTCTGTAGCGAGCAAAAGTCATACC--------GTTATAGCCGGACAGAGATGTA 637 consensus_12998#4 GCAGCTTCTGTAGCGAGCAAAAGTCATACC--------GTTATAGCCGGACAGAGATGTA 286 consensus_12998#2 CNCAGTTCCTATAGCTGTTAGAATGATCTTGAACTACATNCCTGACTTAACAGATNACAA 380 consensus_12998#0 TCACGTGGGACTGCGGCCTCGCTTGCGTGCTCATGGTGCTCAGGACACTCGGGATGGATT 445 consensus_12998#3 TCACGTGGGACTGCGGCCTCGCTTGCGTGCTCATGGTGCTCATGACACTCGGGATGGATT 369 consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 TCATATGTACATATATCCTTGCATCTGTGGCCATG-TGTATCCTACTCCCTGAATCCTCT 696 consensus_12998#4 TCATATGTACATATATCCTTGCATCTGTGGCCATG-TGTATCCTACTCCCTGAATCCTCT 345 consensus_12998#2 TCNT-TACTNCCGTGGCCTGTTCNACNTTTATNCNCCTTGAACCCCNGGATTTGAAGTTT 439 consensus_12998#0 GCTGCGACGGCATTGCCGATCTCGAGAAGCTCTGCCGCACCACGAGGTTCCTCTC--TTG 503 consensus_12998#3 GCTGCGACGGCATTGCCGATCTCGAGAAGCTCTGCCGCACCACGAGCATATGGACAGTTG 429 consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 TCTGTAA-ATTCCAAACCATCTCGCGTGCTCGCCTGCCTTTCTCTGAATGATTCTTAATG 755 consensus_12998#4 TCTGTAA-AAAAAAAAAAAAAAAAA----------------------------------- 369 consensus_12998#2 TCCCCANGANCCCCCCCCNGAATTTNCCTNAAAACCTCCCTCCCATTTTTCCCNTTTAAG 499 consensus_12998#0 GACTAGATTATTACTTCAAATTTGAGTTTACAACTAAACACGGGGGGCGCAATTCTCCTT 563 consensus_12998#3 ACTTGGCATATCTGTTAAA---CAGGTTTTCAATT-----TGCTTTTCCTTCTTCACTGT 481 consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 CAATGTAAGAAGGGATGTTGCCCGCGTATGGGTGTGTTTAGTTCACGCTAAATAAAAAGG 815 consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 AAACCCCNAATTATTTCCCCCTCCNTTCCCAAAGGAACTTGCCGGGGCCTGATCTAANCT 559 consensus_12998#0 AGTTAATGAAAAAAATT---GATACCCCGAATCATTTGTTTATTCATGGATAATTATTCT 620 consensus_12998#3 GACTCTAGGAGCAAATCCGCAATATTCTGCTGAAACCTTTTATAG--------------- 526 consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 A----------------------------------------------------------- 816 consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 CCTCCCTTGAACNCCCCTTTNCCCCCCTNTTCTCCCAAACTGGGCCNGG----------- 608 consensus_12998#0 TCTTTTCTTTATGAGATTGCGTGGATAACGAACAGTGATTACTCTGTCAGTTCATGAATG 680 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 CTTGTTACTACTTTGACCACTTGATTGTTCCCACATTTTGCACTGCATAATCACTTTTAT 740 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 CCGGTGTAGTTAAAATGCTCTTTGCAAATAATTCCATCTTAGGTGAAAATTAATTTGGAA 800 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 GAGAATAAAAAATTGTGCATTTCAATTGTAATATGACAATTATTTATGAGGACATAAAGT 860 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 AGCTTAGACGTGAGAAATATTCGTGGATATATTATATTGCAATACAATCATTCCCTAGAT 920 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 GAGCTGGACATAATATTTAATTCTCTTTAATTTTGGCCTATTAAAAATTTTAATAGCACG 980 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 TCTGGTGTATTAACAATCTGACATTTCTGGGTTGTGCAGCATATGGACAGTTGACTTGGC 1040 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 ATATCTGTTAAACAGGTTTTCAGTTTGTTTTTCCTTCTTCACTGTGACTCTAGGAGCAAA 1100 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 TCCGCAATATTCTGCTGAAACCTTTTATAGGGAGCAATTGCAAGAAGACATTGATCGAGT 1160 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 GGATGAGCTCTTTGGCAGAGCCTTGAAGCTGGAATTAGTATTCAATGCAGATCCATCAGT 1220 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 GCGTATGATATAGCTTTTCTACTGTTATCTGGGCACTGCATTGCTATCGCACTAGTGGAC 1280 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 AAAACAAAATTGAAGTAAGGGATTTTTTTGGTCATAGCAAGTGAGATGAAGTATACTTTG 1340 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 TTCTGTATTTCTGTCAATACTTTTACTCCTTTAAGACAGTCTTACATTTGTCTTCGGCAT 1400 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 TCAGACATCGCCTCATAAGCAAGTTGTCCAATGGTAAATGCAATGGGTGGACAATGTTAC 1460 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 TTGCTGTACTTGTCTCATTTTAATATCTCAAATTCTTTTGATTTAACGGTCATAAGGTGA 1520 consensus_12998#3 ------------------------------------------------------------ consensus_12998#5 ------------------------------------------------------------ consensus_12998#1 ------------------------------------------------------------ consensus_12998#4 ------------------------------------------------------------ consensus_12998#2 ------------------------------------------------------------ consensus_12998#0 TTATTAGTTTAATATTTTGCAACCGTGCCAACATTATGTA 1560 consensus_12998#3 ---------------------------------------- consensus_12998#5 ---------------------------------------- consensus_12998#1 ---------------------------------------- consensus_12998#4 ---------------------------------------- consensus_12998#2 ---------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||