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Oryza sativa
cluster # 12999 cluster # 12999       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12999#0 length = 1515 sequences # 11  
consensus_12999#1 length = 536 sequences # 1  

consensusID : consensus_12999#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1515
fasta sequence
                              [CCGCCGGCCAATCGCCGGCAACCTCAGCCCACATCACCGGAGAGACCCCGTCGGCTCGCCATCGCCGCTCCCCTTGCCGGCCTCCTCCTTCCCACCGCCCCGCATCCATTTCTTCCTCCAGCGAGGTCAGTTCCCCCGCAAAACCGCCCTTCTCCCTCGTCTCCGGCGCCTCCCGCTGCCGGATCCGCCGCCGCCGCCTCCTCCCCGGGCCTCTCTCTGATCCCGTATTCACCGGTGACCACCTTTACTCCACCGGACAGAGCATGCAGAGGTGGACAGATTGAAGTAGGAAAAGAAAATGATCACTCCTCCCGTCGCCGGTGACACCTTCGCCGGAGCGCCGCCGCCGCCGAGTCAGGAGGAGGATGCTCCGCCGTACGGCTCGGTTGTCCTCGGCGGCACCTTCGACCGCCTCCACGACGGCCACCGTCGCCTCCTCAAGGCCTCGGCGGATTTGGCGAGGGATCGGATCGTGGTGGGCGTCTGCACAGGCCCCATGCTCGCCAAGAAAGAGTACGCTGAGTTGATCGAGCCCGTCGAAAAGCGCATGAAGGCTGTGGAGGATTACATCAAGTCTGTTAAACCAGAACTGGTAGTACAAGTGGAGCCTATTGAGGATCCTTATGGCCCATCCATTATTGATGATAAGTTGGATGCCATTATTGTCAGTAAGGAGACATTAAATGGTGGATTTGCCGTAAATAGGAAAAGAGAAGAGAAAGGACTACCTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGAGAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGGAGCAGCATCTAAAGGTGTTTAGCTGTT-TAGGGAGTAAAGTGATTCTGGTTGGCTGTATACTAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCCTATTATTTCCTTTTGCTTCATTTTGCA-CCCCCCCCCC--TTTTTTTTTGCCCTTCTCCTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGT-GGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCA-AGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG-AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTGTAAAAGTATTACTTCACTCTG-AATGATATAG-TTGTACAAATTCAATCTTAGCTCCTGGGAACTTCCGCACTAACCAATTTTACACATTTTTTTATTTCCTACCTTTGCCATGTGAATGTAAAAAAGGAAGTCACCTTGACGTTCTTTGGAGTAATGGTAAATCAATTATAAATGAATTTGCTGCCCCTTCTGTGA]

[+] EMBL CF297190             [CCGCCGGCCAATCGCCGGCAACCTCAGCCCACATCACCGGAGAGACCCCGTCGGCTCGCCATCGCCGCTCCCCTTGCCGGCCTCCTCCTTCCCACCGCCCCGCATCCATTTCTTCCTCCAGCGAGGTCAGTTCCCCCGCAAAACCGCCCTTCTCCCTCGTCTCCGGCGCCTCCCGCTGCCGGATCCGCCGCCGCCGCCTCCTCCCCGGGCCTCTCTCTGATCCCGTATTCACCGGTGACCACCTTTACTCCACCGGACAGAGCATGCAGAGGTGGACAGATTGAAGTAGGAAAAGAAAATGATCACTCCTCCCGTCGCCGGTGACACCTTCGCCGGAGCGCCGCCGCCGCCGAGTCAGGAGGAGGATGCTCCGCCGTACGGCTCGGTTGTCCTCGGCGGCACCTTCGACCGCCTCCACGACGGCCACCGTCGCCTCCTCAAGGCCTCGGCGGATTTGGCGAGGGATCGGATCGTGGTGGGCGTCTGCACAGGCCCCATGCTCGCCAAGAAAGAGTACGCTGAGTTGATCGAGCCCGTCGAAAAGCGCATGAAGGCTGTGGAGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK073022             [     GGCCAATCGCCGGCAACCTCAGCCCACATCACCGGAGAGACCCCGTCGGCTCGCCGTCGCCGCTCCCCTTGCCGGCCTCCTCCTTCCCACCGCCCCGCATCCATTTCTTCCTCCAGCGAGGTCAGTTCCCCCGCAAAACCGCCCTTCTCCCTCGTCTCCGGCGCCTCCCGCTGCCGGATCCGCCGCCGCCGCCTCCTCCCCGGGCCTCTCTCTGATCCCGTATTCACCGGTGACCACCTTTACTCCACCGGACAGAGCATGCAGAGGTGGACAGATTGAAGTAGGAAAAGAAAATGATCACTCCTCCCGTCGCCGGTGACACCTTCGCCGGAGCGCCGCCGCCGCCGAGTCAGGAGGAGGATGCTCCGCCGTACGGCTCGGTTGTCCTCGGCGGCACCTTCGACCGCCTCCACGACGGCCACCGTCGCCTCCTCAAGGCCTCGGCGGATTTGGCGAGGGATCGGATCGTGGTGGGCGTCTGCACAGGCCCCATGCTCGCCAAGAAAGAGTACGCTGAGTTGATCGAGCCCGTCGAAAAGCGCATGAAGGCTGTGGAGGATTACATCAAGTCTGTTAAACCAGAACTGGTAGTACAAGTGGAGCCTATTGAGGATCCTTATGGCCCATCCATTATTGATGATAAGTTGGATGCCATTATTGTCAGTAAGGAGACATTAAATGGTGGATTTGCCGTAAATAGGAAAAGAGAAGAGAAAGGACTACCTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGAGAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGGAGCAGCATCTAAAGGTGTTTAGCTGTT TAGGGAGTAAAGTGATTCTGGTTGGCTGTATACTAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCCTATTATTTCCTTTTGCTTCATTTTGCA CCCCCCCCCC  TTTTTTTTTGCCCTTCTCCTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGT GGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCA AGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTGTAAAAGTATTACTTCACTCTG AATGATATAG TT                                                                                                                                                                  ]
[+] EMBL CB658933             [                                                                                                                                                                                                                                               ttctcTTCCTCCAGCG   AGAGCATGCAGAGGTGGACAGATTGAAGTAGGAAAAGAAAATGATCACTCCTCCCGTCGCCGGTGACACCTTCGCCGGAGCGCCGCCGCCGCCGAGTCAGGAGGAGGATGCTCCGCCGTACGGCTCGGTTGTCCTCGGCGGCACCTTCGACCGCCTCCACGACGGCCACCGTCGCCTCCTCAAGGCCTCGGCGGATTTGGCGAGGGATCGGATCGTGGTGGGCGTCTGCACAGGCCCCATGCTCGCCAAGAAAGAGTACGCTGAGTTGATCGAGCCCGTCGAAAAGCGCATGAAGGCTGTGGAGGATTACATCAAGTCTGTTAAACCAGAACTGGTAGTACAAGTGGAGCCTATTGAGGATCCTTATGGCCCATCCATTATTGATGATAAGTTGGATGCCATTATTGTCAGTAAGGAGACATTAAATGGTGGATTTGCCGTAAATAGGAAAAGAGAAGAGAAAGGACTACCTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGAGAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGGAGCAGCATCTAAAGGTGTTTAGCTGTT TAGGGAGTAAAGTGATTCTGGTTGGCTGTATACTAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCCTATTATTTCCTTTTGCTTCATTTTGCA CCCCCCCCCC  TTTTTTTTTGCCCTTCTCCTCAAACTCAGGCACATATCCACTGCCAGTATTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB654732             [                                                                                                                                                                                                                                                        TCCTCCAGCGAGAGCATGCAGAGGTGGACAGATTGAAGTAGGAAAAGAAAATGATCACTCCTCCCGTCGCCGGTGACACCTTCGCCGGAGCGCCGCCGCCGCCGAGTCAGGAGGAGGATGCTCCGCCGTACGGCTCGGTTGTCCTCGGCGGCACCTTCGACCGCCTCCACGACGGCCACCGTCGCCTCCTCAAGGCCTCGGCGGATTTGGCGAGGGATCGGATCGTGGTGGGCGTCTGCACAGGCCCCATGCTCGCCAAGAAAGAGTACGCTGAGTTGATCGAGCCCGTCGAAAAGCGCATGAAGGCTGTGGAGGATTACATCAAGTCTGTTAAACCAGAACTGGTAGTACAAGTGGAGCCTATTGAGGATCCTTATGGCCCATCCATTATTGATGATAAGTTGGATGCCATTATTGTCAGTAAGGAGACATTAAATGGTGGATTTGCCGTAAATAGGAAAAGAGAAGAGAAAGGACTACCTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGAGAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGGAGCAGCATCTAAAGGTGTTTAGCTGTTATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB654733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGAGGATCCTTATGGCCCATCCATTATTGATGATAAGTTGGATGCCATTATTGTCAGTAAGGAGACATTAAATGGTGGATTTGCCGTAAATAGGAAAAGAGAAGAGAAAGGACTTCCTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGAGAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGGAGCAGCATTTAAAGGTGTTTAGCTGTT TAGGGAGTAAAGTGATTCTGGTTGGCTGTATACTAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCCTATTATTTCCTTTTGGTTCATTTTGCA CCCCCCCCCC  TTTTTTTTTGCCCTTCTCTTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGT GGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAAATATGGTAACAAGAGACAGTCCA AGCTGCAATTCACTTTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTGAAAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTACGGGGCCCTGTAAAAGTATTACTTCACTCTGCAAGCATAAAG ggg                                                                                                                                                                 ]
[-] EMBL CB658934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGAGAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGGAGCAGCATCTAAAGGTGTTTAGCTGTT TAGGGAGTAAAGTGATTCTGGTTGGCTGTATACTAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCCTATTATTTCCTTTTGCTTCATTTTGCA CCCCCCCCCC  TTTTTTTTTGCCCTTCTCCTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGT GGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCA AGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTGTAAAAGTATTACTTCACTCTG AATGATATAG TTGTACAAATTCAATCTTAGCTCCTGGGAACTTCCGCACTAACCAATTTTACACATTTTTTTATTTCCTACCTTTGCCATGTGAATGTAAAAAAGGAAGTCACCTTGACGTTCTTTGGAGTAATGGTAA                                   ]
[+] EMBL CF322842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGGAGCAGCATCTAAAGGTGTTTAGCTGTT TAGGGAGTAAAGTGATTCTGGTTGGCTGTATACTAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCCTATTATTTCCTTTTGCTTCATTTTGCA CCCCCCCCCCCTTTTTTTTTTGCCCTTCTCCTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCACAACCGCGGAAGT GGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCA AGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTG                                                                                                                                                                                                                         ]
[-] EMBL AU225549             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTTTTGCTTCATTTTGCACCCCCCCCCCC  TTTTTTTTTGCCCTTCTCCTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGT GGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCA AGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTGTAAAAGTATTACTTCACTCTG AATGATATAG TTGTACAAATTCAATCTTAGCTCCTGGGAACTTCCGCACTAAaaagcggc                                                                                                                  ]
[-] EMBL CF297189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTTTTTTGCCCTTCTCCTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGT GGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCA AGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTGTAAAAGTATTACTTCACTCTG AATGATATAG TTGTACAAA                                                                                                                                                           ]
[+] EMBL BQ906344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTCAAACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGTGGGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCAGAGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTGTAAAAGTATTACTTCACTCTG AATGATATAGCTTGTACAAATTCAATCTTAaaaaaaaa                                                                                                                                         ]
[+] EMBL CF326260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCA AGCTGCAATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTG AAAGTGGTATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTGTAAAAGTATTACTTCACTCTG AATGATATAG TTGTACAAATTCAATCTTAGCTCCTGGGAACTTCCGCACTAACCAATTTTACACATTTTTTTATTTCCTACCTTTGCCATGTGAATGTAAAAAAGGAAGTCATCTTGACGTTCTTTGGAGTAATGGTAAATCAATTATAAATGAATTTGCTGCCCCTTCTGTGA]


>consensus_12999#0 CCGCCGGCCAATCGCCGGCAACCTCAGCCCACATCACCGGAGAGACCCCGTCGGCTCGCC ATCGCCGCTCCCCTTGCCGGCCTCCTCCTTCCCACCGCCCCGCATCCATTTCTTCCTCCA GCGAGGTCAGTTCCCCCGCAAAACCGCCCTTCTCCCTCGTCTCCGGCGCCTCCCGCTGCC GGATCCGCCGCCGCCGCCTCCTCCCCGGGCCTCTCTCTGATCCCGTATTCACCGGTGACC ACCTTTACTCCACCGGACAGAGCATGCAGAGGTGGACAGATTGAAGTAGGAAAAGAAAAT GATCACTCCTCCCGTCGCCGGTGACACCTTCGCCGGAGCGCCGCCGCCGCCGAGTCAGGA GGAGGATGCTCCGCCGTACGGCTCGGTTGTCCTCGGCGGCACCTTCGACCGCCTCCACGA CGGCCACCGTCGCCTCCTCAAGGCCTCGGCGGATTTGGCGAGGGATCGGATCGTGGTGGG CGTCTGCACAGGCCCCATGCTCGCCAAGAAAGAGTACGCTGAGTTGATCGAGCCCGTCGA AAAGCGCATGAAGGCTGTGGAGGATTACATCAAGTCTGTTAAACCAGAACTGGTAGTACA AGTGGAGCCTATTGAGGATCCTTATGGCCCATCCATTATTGATGATAAGTTGGATGCCAT TATTGTCAGTAAGGAGACATTAAATGGTGGATTTGCCGTAAATAGGAAAAGAGAAGAGAA AGGACTACCTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGA GAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGG AGCAGCATCTAAAGGTGTTTAGCTGTTTAGGGAGTAAAGTGATTCTGGTTGGCTGTATAC TAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCC TATTATTTCCTTTTGCTTCATTTTGCACCCCCCCCCCTTTTTTTTTGCCCTTCTCCTCAA ACTCAGGCACATATCCACTGCCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGTGGTG TGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTG AAGCAAAAGGTAAAGCGGATTCAAAGTGAAACTATGGTAACAAGAGACAGTCCAAGCTGC AATTCACTCTACTAAATCCTGAATGATCCTCCATAGTCTCAACAAGTAATCTGAAAGTGG TATTTTAGTTACCTTTTTGAGGAATTATGTTTGAAACTTGTCCCAGCTTCCAGGGCCCTG TAAAAGTATTACTTCACTCTGAATGATATAGTTGTACAAATTCAATCTTAGCTCCTGGGA ACTTCCGCACTAACCAATTTTACACATTTTTTTATTTCCTACCTTTGCCATGTGAATGTA AAAAAGGAAGTCACCTTGACGTTCTTTGGAGTAATGGTAAATCAATTATAAATGAATTTG CTGCCCCTTCTGTGA



consensusID : consensus_12999#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 536
fasta sequence
                              [TTTTTTTTTTGGCCCTTCTCCTCAAACTCAGGCACATATCCACTGGCCAGTATTATGGCAGCGGTGCAGAACCGCGGAAGTGGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAACGCAAAAGGTAAATGCGGATTCACACAGTGAAACTATGGTAACACAGAGACATGTCCAAGCTGCNNATTCACTCTACTAAATCCGTGAAGTGATCCTCCATAGTCTCAANCAAGTAATCTGAAAGGTGGTATTTATAGTTACCTTTTTGAGGAATTATGGTTGTGAAACTTGTCCCAGCTTCCAGGGGCCCTGGTAAGAAGTATTACTTCACGTCTGAATGATATAGTGGTACAAATTCAATCTTAGCTCCGTGGGAACTTCCGCACTAACCAAATTTTACAGCAGTTTTTTATAGTCTTCCATAGCCGTTGGCCAGTGGTGAAGTGGTACACACAAAGGGAAGTCACCGTTGGAGCGGTTCTGTGGGGNAGATAAGTGGTAAAACTCA]

[-] EMBL BM419628             [TTTTTTTTTTGGCCCTTCTCCTCAAACTCAGGCACATATCCACTGGCCAGTATTATGGCAGCGGTGCAGAACCGCGGAAGTGGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGTGAACGCAAAAGGTAAATGCGGATTCACACAGTGAAACTATGGTAACACAGAGACATGTCCAAGCTGCNNATTCACTCTACTAAATCCGTGAAGTGATCCTCCATAGTCTCAANCAAGTAATCTGAAAGGTGGTATTTATAGTTACCTTTTTGAGGAATTATGGTTGTGAAACTTGTCCCAGCTTCCAGGGGCCCTGGTAAGAAGTATTACTTCACGTCTGAATGATATAGTGGTACAAATTCAATCTTAGCTCCGTGGGAACTTCCGCACTAACCAAATTTTACAGCAGTTTTTTATAGTCTTCCATAGCCGTTGGCCAGTGGTGAAGTGGTACACACAAAGGGAAGTCACCGTTGGAGCGGTTCTGTGGGGNAGATAAGTGGTAAAACTCA]


>consensus_12999#1 TTTTTTTTTTGGCCCTTCTCCTCAAACTCAGGCACATATCCACTGGCCAGTATTATGGCA GCGGTGCAGAACCGCGGAAGTGGTGTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAG AAGAAGAAAAAGGGGGTTCAAAGTGAACGCAAAAGGTAAATGCGGATTCACACAGTGAAA CTATGGTAACACAGAGACATGTCCAAGCTGCNNATTCACTCTACTAAATCCGTGAAGTGA TCCTCCATAGTCTCAANCAAGTAATCTGAAAGGTGGTATTTATAGTTACCTTTTTGAGGA ATTATGGTTGTGAAACTTGTCCCAGCTTCCAGGGGCCCTGGTAAGAAGTATTACTTCACG TCTGAATGATATAGTGGTACAAATTCAATCTTAGCTCCGTGGGAACTTCCGCACTAACCA AATTTTACAGCAGTTTTTTATAGTCTTCCATAGCCGTTGGCCAGTGGTGAAGTGGTACAC ACAAAGGGAAGTCACCGTTGGAGCGGTTCTGTGGGGNAGATAAGTGGTAAAACTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12999#0      CCGCCGGCCAATCGCCGGCAACCTCAGCCCACATCACCGGAGAGACCCCGTCGGCTCGCC 60
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      ATCGCCGCTCCCCTTGCCGGCCTCCTCCTTCCCACCGCCCCGCATCCATTTCTTCCTCCA 120
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      GCGAGGTCAGTTCCCCCGCAAAACCGCCCTTCTCCCTCGTCTCCGGCGCCTCCCGCTGCC 180
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      GGATCCGCCGCCGCCGCCTCCTCCCCGGGCCTCTCTCTGATCCCGTATTCACCGGTGACC 240
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      ACCTTTACTCCACCGGACAGAGCATGCAGAGGTGGACAGATTGAAGTAGGAAAAGAAAAT 300
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      GATCACTCCTCCCGTCGCCGGTGACACCTTCGCCGGAGCGCCGCCGCCGCCGAGTCAGGA 360
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      GGAGGATGCTCCGCCGTACGGCTCGGTTGTCCTCGGCGGCACCTTCGACCGCCTCCACGA 420
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      CGGCCACCGTCGCCTCCTCAAGGCCTCGGCGGATTTGGCGAGGGATCGGATCGTGGTGGG 480
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      CGTCTGCACAGGCCCCATGCTCGCCAAGAAAGAGTACGCTGAGTTGATCGAGCCCGTCGA 540
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      AAAGCGCATGAAGGCTGTGGAGGATTACATCAAGTCTGTTAAACCAGAACTGGTAGTACA 600
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      AGTGGAGCCTATTGAGGATCCTTATGGCCCATCCATTATTGATGATAAGTTGGATGCCAT 660
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      TATTGTCAGTAAGGAGACATTAAATGGTGGATTTGCCGTAAATAGGAAAAGAGAAGAGAA 720
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      AGGACTACCTTTGCTGAAGGTTGAGGTTGTTGATCTTCTATCCGGAGGAGCAGAGGGTGA 780
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      GAAATTGAGTTCATCTGCTTTAAGGAAGCTTGAAGCAGAGAAAGCTAATCAGCAAGAAGG 840
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      AGCAGCATCTAAAGGTGTTTAGCTGTTTAGGGAGTAAAGTGATTCTGGTTGGCTGTATAC 900
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      TAAAATCGAGTGAATTGCATTTTGGACCCCTTTTCTTACTATAATTTCACTTTGGACCCC 960
consensus_12999#1      ------------------------------------------------------------
                                                                                   

consensus_12999#0      TATTATTTCCTTTTGCTTCATTTTGCACCCCCCCCCCTTTTTTTTTGCCCTTCTCCTCAA 1020
consensus_12999#1      -----------------------------------TTTTTTTTTTGGCCCTTCTCCTCAA 25
                                                            ******** **************

consensus_12999#0      ACTCAGGCACATATCCACTG-CCAGTATTATGGCAGCGGCTGCAGAACCGCGGAAGTGGT 1079
consensus_12999#1      ACTCAGGCACATATCCACTGGCCAGTATTATGGCAGCGG-TGCAGAACCGCGGAAGTGGT 84
                       ******************** ****************** ********************

consensus_12999#0      GTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGT 1139
consensus_12999#1      GTGACCTAGGAGATAATGCTATTTCCAGAGCTGGAGAAGAAGAAAAAGGGGGTTCAAAGT 144
                       ************************************************************

consensus_12999#0      GAA-GCAAAAGGTAAA-GCGGATTCAAA--GTGAAACTATGGTAACA-AGAGACA-GTCC 1193
consensus_12999#1      GAACGCAAAAGGTAAATGCGGATTCACACAGTGAAACTATGGTAACACAGAGACATGTCC 204
                       *** ************ ********* *  ***************** ******* ****

consensus_12999#0      AAGCTGCAA-TTCACTCTACTAAATCC-TGAA-TGATCCTCCATAGTCTCAAC-AAGTAA 1249
consensus_12999#1      AAGCTGCNNATTCACTCTACTAAATCCGTGAAGTGATCCTCCATAGTCTCAANCAAGTAA 264
                       *******   ***************** **** *******************  ******

consensus_12999#0      TCTGAAAG-TGGTATTT-TAGTTACCTTTTTGAGGAATTATGTTTG--AAACTTGTCCCA 1305
consensus_12999#1      TCTGAAAGGTGGTATTTATAGTTACCTTTTTGAGGAATTATGGTTGTGAAACTTGTCCCA 324
                       ******** ******** ************************ ***  ************

consensus_12999#0      GCTTCCAGGGCCCT--GTAA-AAGTATTACTTCAC-TCTGAATGATATAGTTGTACAAAT 1361
consensus_12999#1      GCTTCCAGGGGCCCTGGTAAGAAGTATTACTTCACGTCTGAATGATATAGTGGTACAAAT 384
                       ********** **   **** ************** *************** ********

consensus_12999#0      TCAATCTTAGCTCC-TGGGAACTTCCGCACTAACCAA-TTTTACA-CATTTTTTTATTTC 1418
consensus_12999#1      TCAATCTTAGCTCCGTGGGAACTTCCGCACTAACCAAATTTTACAGCAGTTTTTTATAGT 444
                       ************** ********************** ******* ** ********   

consensus_12999#0      CTACCTTTGCCATGTGAATGTAAAAAAGGAAGTCACCTTGACGTTCTTTGGAGTAATGGT 1478
consensus_12999#1      CTTCCATAGCCGTTGGCCAGTGGTGAAGTGGTACACACAAAGGGAAGTCACCGTTGGAGC 504
                       ** ** * *** *  *   **    ***     ***    * *    *    **    * 

consensus_12999#0      AAATCAATTATAAATGAATTTGCTGCCCCTTCTGTGA 1515
consensus_12999#1      GGTTCTGTGGGGNAGATAAGTGGTAAAACTCA----- 536
                          **  *     *   *  ** *    **       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)