These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13022#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1547 fasta sequence [CGGCGGTGGATGATGCTACCGGAGGGCCACGGCCTCTACCCCGGCCATCCCGACCTCCGCGGCTACGTCCGCTTCTTCAACCTCTCCACCGCCGCCTTGGTCCGTGTCCATCTACCGCTCCTACGCGACCACGTCATCATCGACTCGGTCGACGGCCTCCTGCTCCTGCACCGCGACCACGACACAGCCATCCGCCTCCTCCACCCCTTCACCGGCGATGTCGCCGACCTCCCGCCGCTGGCTTCCCTCCTGCCACAGATGGAATCCGAGAGCCGCGACCGCAGCCAGCGAAGCAAGCACAGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTCATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGGACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTCTATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTGCTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATACTAGAAGGATATGCGCGGCGCCACGCCGCGCACGACAATGTTTTGCATGAGCTTAGTGAAGGCTACGTAGCATAATTAAATGTGAACCAAAGATCACATTCTTTCCAA] [+] EMBL AK101587 [CGGCGGTGGATGATGCTACCGGAGGGCCACGGCCTCTACCCCGGCCATCCCGACCTCCGCGGCTACGTCCGCTTCTTCAACCTCTCCACCGCCGCCTTGGTCCGTGTCCATCTACCGCTCCTACGCGACCACGTCATCATCGACTCGGTCGACGGCCTCCTGCTCCTGCACCGCGACCACGACACAGCCATCCGCCTCCTCCACCCCTTCACCGGCGATGTCGCCGACCTCCCGCCGCTGGCTTCCCTCCTGCCACAGATGGAATCCGAGAGCCGCGACCGCAGCCAGCGAAGCAAGCACAGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTCATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGGACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTCTATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTGCTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATACTAGAAGGATATGCGCGGCGCCACGCCGCGCACGACAATGTTTTGCATGAGCTTAGTGAAGGCTACGTAGCATAATTAAATGTGAACCAAAGATCACATTCTTTCCAA] [+] EMBL AK106162 [CGGCGGTGGATGATGCTACCGGAGGGCCACGGCCTCTACCCCGGCCATCCCGACCTCCGCGGCTACGTCCGCTTCTTCAACCTCTCCACCGCCGCCTTGGTCCGTGTCCATCTACCGCTCCTACGCGACCACGTCATCATCGACTCGGTCGACGGCCTCCTGCTCCTGCACCGCGACCACGACACAGCCATCCGCCTCCTCCACCCCTTCACCGGCGATGTCGCCGACCTCCCGCCGCTGGCTTCCCTCCTGCCACAGATGGAATCCGAGAGCCGCGACCGCAGCCAGCGAAGCAAGCACAGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTCATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGGACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTCTATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTGCTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACA ] [+] EMBL AK072644 [CGGCGGTGGATGATGCTACCGGAGGGCCACGGCCTCTACCCCGGCCATCCCGACCTCCGCGGCTACGTCCGCTTCTTCAACCTCTCCACCGCCGCCTTGGTCCGTGTCCATCTACCGCTCCTACGCGACCACGTCATCATCGACTCGGTCGACGGCCTCCTGCTCCTGCACCGCGACCACGACACAGCCATCCGCCTCCTCCACCCCTTCACCGGCGATGTCGCCGACCTCCCGCCGCTGGCTTCCCTCCTGCCACAGATGGAATCCGAGAGCCGCGACCGCAGCCAGCGAAGCAAGCACAGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTCATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGGACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTCTATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTGCTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCT ] [+] EMBL CF323948 [ TGTCCATCTACCGCTCCTACGCGACCACGTCATCATCGACTCAGTCGACGGCCTCCTGCTCCTGCACCGCGACCACGACACAGCCATCCGCCTCCTCCACCCCTTCACCGGCGATGTCGCCGACCTCCCGCCGCTGGCTTCCCTCCTGCCACAGATGGAATCCGAGAGCCGCGACCGCAGCCAGCGAAGCAAGCACAGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTCATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGGACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTCTATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAAC ] [+] EMBL CB655912 [ CGACCTCCCGCCGCTGGCTTCCCTCCTGCCACAGATGGAATCCGAGAGCCGCGACCGCAGCCAGCGAAGCAAGCACAGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTCATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGGACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTCTATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTGCTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGNGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGNCATCGCAGATATTGGAATAAGGGAtc ] [+] EMBL CF307157 [ CGACCGCAGCCAGCGAAGCAAGCACAGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTCATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGGACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTCTATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTGCTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGA ] [+] EMBL AK061644 [ TATACATCTACCAGTTTAATCCACCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAATGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTGCTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTA ] [-] EMBL CB655913 [ TAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATACTAGAAGGATATGCGCGGCGCCACGCCGCGCACGACAATGTTTTGCATGAGCTTAGTGAAGGCT ] consensusID : consensus_13022#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 785 fasta sequence [CTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATTGATACGGGAAGGATATGCGCGGCGCCACGCCGCGCACGCCTAAAAGGAAAAAAAAAAA] [-] EMBL CB665937 [CTTGCTGACCTTGTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAACGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGATTTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATATTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATTGATACGGGAAGGATATGCGCGGCGCCACGCCGCGCACGCCTAAAAGGA ] [+] EMBL AF358771 [ CCAGCTAGTGACGGAGACATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGCAATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTGGTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCCTCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGAAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATACTAGAAGGATATGCGCGGCGCCACGCCGCGCACGACAAAAAAAAAAAAAAAAAA] consensusID : consensus_13022#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 295 fasta sequence [AGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATAAAAAAAAAAA] [+] EMBL CA999885 [AGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGCAGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCGATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATGCCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATAAAAAAAAAAA] consensusID : consensus_13022#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 247 fasta sequence [CCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATACTAGAAGGATATGCGCGGCGCCACGCCGNANNGNACAATGTTTTGCATGAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU057977 [CCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGCTGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATACTAGAAGGATATGCGCGGCGCCACGCCGNANNGNACAATGTTTTGCATGAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13022#0 CGGCGGTGGATGATGCTACCGGAGGGCCACGGCCTCTACCCCGGCCATCCCGACCTCCGC 60 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 GGCTACGTCCGCTTCTTCAACCTCTCCACCGCCGCCTTGGTCCGTGTCCATCTACCGCTC 120 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 CTACGCGACCACGTCATCATCGACTCGGTCGACGGCCTCCTGCTCCTGCACCGCGACCAC 180 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 GACACAGCCATCCGCCTCCTCCACCCCTTCACCGGCGATGTCGCCGACCTCCCGCCGCTG 240 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 GCTTCCCTCCTGCCACAGATGGAATCCGAGAGCCGCGACCGCAGCCAGCGAAGCAAGCAC 300 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 AGCAGACTAATGAAAGTTTGCGCATCTGTTACCGTCACCTCCACTGGCACCATCACCGTC 360 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 ATGCTGGCCCTTGAAATCCTGCACCGCGTAGCCTACGCCACTCCCGGTGACCAACGGTGG 420 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 ACTCTCTCTGCCTGGACGCTCAAACCTTTTGTCAAACCCGTATCTTTCCAAGGCAAACTC 480 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 TATGCTTTGCAGCTCTCATCTTACGACATACATAAGGTATACATCTACCAGTTTAATCCA 540 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 CCATGCCAAGATAACGACAAGGGATTGCTTCATCTGCCATTGCCAGTGAAGATTGCTGAA 600 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 TGCCCAATGGACAAATTTCTATACCTGCTCAACTTTGCTGAATGTGGTTCAGAGCTCTTG 660 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 CTGGTTGCCTATAATGGTGTTTCTCGTTCAAAGCTGCTAGTATACAGACTTGCTGACCTT 720 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------CTTGCTGACCTT 12 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 GTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAA 780 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 GTCAGTGGAAGGATTGAGCCAGTAACGACCATTGGAGACCACGCCTTGTTCCTTGATGAA 72 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 CGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGAT 840 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 CGTTGTCTCTGTGTCTCACTCTCAAATAACAAGGAGGGGAGTAAGATCCTTCCCTCCGAT 132 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 TTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATA 900 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 TTGTCTAACTCTATCATTTGCATGCATAGTTTGCAGGTCGATCCTAGTTCACTAGATATA 192 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 TTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGAC 960 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 TTTCGTTTTGAGCAATATGACCTAGGTACTGGTACCTGGGCTCCAGCTAGTGACGGAGAC 252 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 ATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGC 1020 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ATTTTCCATAAACCACCACCGAGTCCCCATACACTTATCCATCATATCTTTACTTGCTGC 312 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 AATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTG 1080 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 AATCGCAGATATTGGAATAAAGGAATCATGTATTGCAGTAAAAGACAGCCTATTTGGTTG 372 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 GTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCC 1140 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 GTGAAGCAAGAACTGCGGTTTGGGGCTTGATGGGCTCTTGTTTCCGCTGAGGTCTTTTCC 432 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 TCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGC 1200 consensus_13022#2 --------------AGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGC 46 consensus_13022#1 TCCAGAATATCTAGAGGAGCAAATAAACTATGGGTGTGTTCGGAGGGGGCATTTTACAGC 492 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 AGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCG 1260 consensus_13022#2 AGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCG 106 consensus_13022#1 AGCGGCTGCGGCTGCAGCAGTTCAAAACTGCTGCGGCAGCGATGCCGCCGAACAGAGTCG 552 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 ATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATG 1320 consensus_13022#2 ATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATG 166 consensus_13022#1 ATGTGTTCTCTATTGAAAGTCCCTGGATCAATCGTCCAATTAGTGTATGGACCTTTGATG 612 consensus_13022#3 ------------------------------------------------------------ consensus_13022#0 CCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGC 1380 consensus_13022#2 CCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGC 226 consensus_13022#1 CCTTCTTCCCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGC 672 consensus_13022#3 --------CCTGGATTAATCGTCCAATTAGTGCATGGACCTTTGATGCCTTCTTCTTGGC 52 **************************************************** consensus_13022#0 TGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATAC 1440 consensus_13022#2 TGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATAA 286 consensus_13022#1 TGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATTGATAC 732 consensus_13022#3 TGTTTGACGGACCTTTGTTGCCCCATCTTTAACAGTATGCTACACATCTATTATAGATAC 112 ****************************************************** **** consensus_13022#0 TAGAAGGATATGCGCGGCGCCACGCCGCGCACGACAATGTTTTGCATGAGCTTAGTGAAG 1500 consensus_13022#2 AAAAAAAAA--------------------------------------------------- 295 consensus_13022#1 GGGAAGGATATGCGCGGCGCCACGCCGCGCACGCCTAAAAGGAAAAAAAAAAA------- 785 consensus_13022#3 TAGAAGGATATGCGCGGCGCCACGCCGNANNGNACAATGTTTTGCATGAGCTTAAAAAAA 172 ** * consensus_13022#0 GCTACGTAGCATAATTAAATGTGAACCAAAGATCACATTCTTTCCAA------------- 1547 consensus_13022#2 ------------------------------------------------------------ consensus_13022#1 ------------------------------------------------------------ consensus_13022#3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 232 consensus_13022#0 --------------- consensus_13022#2 --------------- consensus_13022#1 --------------- consensus_13022#3 AAAAAAAAAAAAAAA 247 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||