These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13024#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2976 fasta sequence [ACCCTCACCTCCACTCCCCCCTCGCCGGAGCCACGGCGACCCTCTCCACCCCCTGCCTTGCCGCCGGCGAGTGTCCTTGCGTGCGCCGCCGGTGAGCGGGTGTGGATCCCAGCGGCGGCGCGATCGGCCTTCGAATCGAACTGAAAGCTGAACCCTCGTTGCCACTGCTGTGAACATGTCCCAAATTGAGAAGATCGTATGAGCTATGGGGAATTATTAGGATTCTTGGAGGCGGCGGCGGCATATGGTGTTCTTCCCGGAGGAGGTGGTGGAGCACATCCTTGGGTTTCTAGCGTCGCACCGCGACCGCAACGCGGTGTCGCTGGTGTGCCGGGAGTGGTACCGCGTCGAGCGCCTCAGCCGCCGCTCGGTGCTCGTGCGCAACTGCTACGCGGCGCGCCCGGAGCGCGTGCACGCGCGCTTCCCCGGCCTGCGCTCGCTGAGCGTGAAGGGGAGGCCGCGCTTTGTCCCCGCGGGGTGGGGTGCCGCGGCGCGGCCATGGGTGGCCGCGTGCGTCGCCGCGTGCCCTGGCCTCGAGGAGCTCCGGCTGAAGCGGATGGTTGTCACTGATGGGTGCCTCAAGCTGCTCGCTTGCTCATTCCCCAATTTGAAGTCGCTCGTCCTTGTTGGCTGTCAGGGGTTCAGCACTGATGGGCTTGCTACTGTCGCTACCAATTGCAGATTTATGAAGGAACTGGACTTACAAGAGAGTCTGGTGGAGGATCGAGACTCTCGTTGGCTTGGATGTTTTCCCAAGCCTTCTACATTACTAGAATCCTTGAATTTTTCTTGCTTGACCGGGGAGGTGAATAGTCCTGCATTGGAAATACTGGTTGCA-AGGAGTCCAAATCTTAGAAGCTTGAGATTGAACCGTTCAGTTCCACTTGATGTTTTGGCCAGAATTCTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTACGAGGCAATATTGTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTGCTGAAGAGTTTATCTGGGTTTTGGGATGCTACAAGCTTGTTTATTCCAGTGATTGCTCCTGTTTGCAAGAATCTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTATCTTATTGAATTTATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATTGGTGATGAAGGATTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTATTTCCTGCGAATGCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATATCTGCAGGCTGTAACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCTGCACTGATTACTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGGATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATCGTACAGTCATGCAAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTGTTCCTCTACATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGACGATGGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAAATCAGGGACAGTCCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCAATGCGCTCACTCTGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTTGCAGCAAGCATGGCAAACCTCAACATCGAGGTCATGAATAGAGCAGCAAGTATCAATGAGGCAGACAATGCTAATGATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTGCTGGACCGAGGGGTGATGCGCCTGAATTCATCTCAACGTTCTAAATCCATATATTTTTGAAGTTGAAGGTTTGTTCTTCGACAACCACCTTTTGTTTATATCATACTCTGCTACGTCGAGTTGATCTACATGTTCTAAAGATCTATCTATCTTCACGGTCGAAGGGATCTTCTAGGATTATTTTGTGTAAATTCCTTTGCTATCACCTCTGCTATGTCATTATCTTCCAGCAGTGCTACACTTATGATTAATCTCCAAAATTGAAACTCTATAGTTATGGTTAACTTGGCAGATTGATTACACATCATGGTAACATCTAAGCCTT---GTAATACCATAATTCTAGCAAGTCATATGCGTGGTTCATCTTCATGTATATACGATTTCATATCGATGCTCTCATGTAATGTCTGGGAAATTTGAAGTGCCAAATTGTTACTTTTCTGAGTCGAAAGATATGATCAGTTAAGCCTGATGAACAGCTGATTCAGTAGTTGGACCCTCCAATTTGTTGCAGCATTTCAGCACTGGTCAAGACTAATCTGTGATTTACAGTTTGAGAATTTGAGTAGATCCCCATCCTGTTTACCTTCAAATACTCTGAAATTTTTCTTTCTGATGTCGCAATCCAATGTCCATGTCGCTGCAAGACAGGGTGGCTTGGAAGTCAGTCATCTCGCTGTCAGTTGTAGCGT--GGGTGTACTGGTGTTGCTCACAGTTTGATATCATCATCATGGCCATCACACAACATGCTTATTCCTGCACGGTTTAGCAAGCTTTAATTGACCACCATCATCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGAGTCCAAATTCCAAAATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATTGGATATACGGACACACATTTGAAGTATTAAATGTAATCTAATAACACAGTAAATTATAGATTCCGCCTGTAAACTGCTTGGTGAATTTATTGAGCCTAATTAATCCGTTATTAGTAAAAAAAAAGA] [+] EMBL AK072358 [ACCCTCACCTCCACTCCCCCCTCGCCGGAGCCACGGCGACCCTCTCCACCCCCTGCCTTGCCGCCGGCGAGTGTCCTTGCGTGCGCCGCCGGTGAGCGGGTGTGGATCCCAGCGGCGGCGCGATCGGCCTTCGAATCGAACTGAAAGCTGAACCCTCGTTGCCACTGCTGTGAACATGTCCCAAATTGAGAAGATCGTATGAGCTATGGGGAATTATTAGGATTCTTGGAGGCGGCGGCGGCATATGGTGTTCTTCCCGGAGGAGGTGGTGGAGCACATCCTTGGGTTTCTAGCGTCGCACCGCGACCGCAACGCGGTGTCGCTGGTGTGCCGGGAGTGGTACCGCGTCGAGCGCCTCAGCCGCCGCTCGGTGCTCGTGCGCAACTGCTACGCGGCGCGCCCGGAGCGCGTGCACGCGCGCTTCCCCGGCCTGCGCTCGCTGAGCGTGAAGGGGAGGCCGCGCTTTGTCCCCGCGGGGTGGGGTGCCGCGGCGCGGCCATGGGTGGCCGCGTGCGTCGCCGCGTGCCCTGGCCTCGAGGAGCTCCGGCTGAAGCGGATGGTTGTCACTGATGGGTGCCTCAAGCTGCTCGCTTGCTCATTCCCCAATTTGAAGTCGCTCGTCCTTGTTGGCTGTCAGGGGTTCAGCACTGATGGGCTTGCTACTGTCGCTACCAATTGCAGATTTATGAAGGAACTGGACTTACAAGAGAGTCTGGTGGAGGATCGAGACTCTCGTTGGCTTGGATGTTTTCCCAAGCCTTCTACATTACTAGAATCCTTGAATTTTTCTTGCTTGACCGGGGAGGTGAATAGTCCTGCATTGGAAATACTGGTTGCA AGGAGTCCAAATCTTAGAAGCTTGAGATTGAACCGTTCAGTTCCACTTGATGTTTTGGCCAGAATTCTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTACGAGGCAATATTGTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTGCTGAAGAGTTTATCTGGGTTTTGGGATGCTACAAGCTTGTTTATTCCAGTGATTGCTCCTGTTTGCAAGAATCTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTATCTTATTGAATTTATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATTGGTGATGAAGGATTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTATTTCCTGCGAATGCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATATCTGCAGGCTGTAACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCTGCACTGATTACTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGGATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATCGTACAGTCATGCAAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTGTTCCTCTACATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGACGATGGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAAATCAGGGACAGTCCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCAATGCGCTCACTCTGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTTGCAGCAAGCATGGCAAACCTCAACATCGAGGTCATGAATAGAGCAGCAAGTATCAATGAGGCAGACAATGCTAATGATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTGCTGGACCGAGGGGTGATGCGCCTGAATTCATCTCAACGTTCTAAATCCATATATTTTTGAAGTTGAAGGTTTGTTCTTCGACAACCACCTTTTGTTTATATCATACTCTGCTACGTCGAGTTGATCTACATGTTCTAAAGATCTATCTATCTTCACGGTCGAAGGGATCTTCTAGGATTATTTTGTGTAAATTCCTTTGCTATCACCTCTGCTATGTCATTATCTTCCAGCAGTGCTACACTTATGATTAATCTCCAAAATTGAAACTCTATAGTTATGGTTAACTTGGCAGATTGATTACACATCATGGTAACATCTAAGCCTT GTAATACCATAATTCTAGCAAGTCATATGCGTGGTTCATCTTCATGTATATACGATTTCATATCGATGCTCTCATGTAATGTCTGGGAAATTTGAAGTGCCAAATTGTTACTTTTCTGAGTCGAAAGATATGATCAGTTAAGCCTGATGAACAGCTGATTCAGTAGTTGGACCCTCCAATTTGTTGCAGCATTTCAGCACTGGTCAAGACTAATCTGTGATTTACAGTTTGAGAATTTGAGTAGATCCCCATCCTGTTTACCTTCAAATACTCTGAAATTTTTCTTTCTGATGTCGCAATCCAATGTCCATGTCGCTGCAAGACAGGGTGGCTTGGAAGTCAGTCATCTCGCTGTCAGTTGTAGCGT GGGTGTACTGGTGTTGCTCACAGTTTGATATCATCATCATGGCCATCACACAACATGCTTATTCCTGCACGGTTTAGCAAGCTTTAATTGACCACCATCATCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGAGTCCAAATTCCAAAATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATTGGATATACGGACACACATTTGAAGTATTAAATGTAATCTAATAACACAGTAAATTATAGATTCCGCCTGTAAACTGCTTGGTGAATTTATTGAGCCTAATTAATCCGTTATTAGTAAA ] [+] EMBL AK105629 [ CCTCACCTCCACTCCCCCCTCGCCGGAGCCACGGCGACCCTCTCCACCCCCTGCCTTGCCGCCGGCGAGTGTCCTTGCGTGCGCCGCCGGTGAGCGGGTGTGGATCCCAGCGGCGGCGCGATCGGCCTTCGAATCGAACTGAAAGCTGAACCCTCGTTGCCACTGCTGTGAACATGTCCCAAATTGAGAAGATCGTATGAGCTATGGGGAATTATTAGGATTCTTGGAGGCGGCGGCGGCATATGGTGTTCTTCCCGGAGGAGGTGGTGGAGCACATCCTTGGGTTTCTAGCGTCGCACCGCGACCGCAACGCGGTGTCGCTGGTGTGCCGGGAGTGGTACCGCGTCGAGCGCCTCAGCCGCCGCTCGGTGCTCGTGCGCAACTGCTACGCGGCGCGCCCGGAGCGCGTGCACGCGCGCTTCCCCGGCCTGCGCTCGCTGAGCGTGAAGGGGAGGCCGCGCTTTGTCCCCGCGGGGTGGGGTGCCGCGGCGCGGCCATGGGTGGCCGCGTGCGTCGCCGCGTGCCCTGGCCTCGAGGAGCTCCGGCTGAAGCGGATGGTTGTCACTGATGGGTGCCTCAAGCTGCTCGCTTGCTCATTCCCCAATTTGAAGTCGCTCGTCCTTGTTGGCTGTCAGGGGTTCAGCACTGATGGGCTTGCTACTGTCGCTACCAATTGCAGATTTATGAAGGAACTGGACTTACAAGAGAGTCTGGTGGAGGATCGAGACTCTCGTTGGCTTGGATGTTTTCCCAAGCCTTCTACATTACTAGAATCCTTGAATTTTTCTTGCTTGACCGGGGAGGTGAATAGTCCTGCATTGGAAATACTGGTTGCA AGGAGTCCAAATCTTAGAAACTTGAGATTGAACCGTTCAGTTCCACTTGATGTTTTGGCCAGAATTCTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTACGAGGCAATATTGTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTGCTGAAGAGTTTATCTGGGTTTTGGGATGCTACAAGCTTGTTTATTCCAGTGATTGCTCCTGTTTGCAAGAATCTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTATCTTATTGAATTTATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATTGGTGATGAAGGATTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTATTTCCTGCGAATGCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATATCTGCAGGCTGTAACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCTGCACTGATTACTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGGATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATCGTACAGTCATGCAAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTGTTCCTCTACATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGACGATGGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAAATCAGGGACAGTCCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCAATGCGCTCACTCTGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTTGCAGCAAGCATGGCAAACCTCAACATCGAGGTCATGAATAGAGCAGCAAGTATCAATGAGGCAGACAATGCTAATGATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTGCTGGACCGAGGGGTGATGCGCCTGAATTCATCTCAACGTTCTAAATCCATATATTTTTGAAGTTGAAGGTTTGTTCTTCGACAACCACCTTTTGTTTATATCATACTCTGCTACGTCGAGTTGATCTACATGTTCTAAAGATCTATCTATCTTCACGGTCGAAGGGATCTTCTAGGATTATTTTGTGTAAATTCCTTTGCTATCACCTCTGCTATGTCATTATCTTCCAGCAGTGCTACACTTATG ] [+] EMBL CB634794 [ TCGCCGGAGCCACGGCGACCCTCTCCACCCCCTGCCTCGCCGCCGGCGAGTGTCCTTGCGTGCGCCGCCGGTGAGCGGGTGTGGATCCCAGCGGCGGCGCGATCGGCCTTCGAATCGAACTGAAAGCTGAACCCTCGTTGCCACTGCTGTGAACATGTCCCAAATTGAGAAGATCGTATGAGCTATGGGGAATTATTAGGATTCTTGGAGGCGGCGGCGGCATATGGTGTTCTTCCCGGAGGAGGTGGTGGAGCACATCCTTGGGTTTCTAGCGTCGCACCGCGACCGCAACGCGGTGTCGCTGGTGTGCCGGGAGTGGTACCGCGTCGAGCGCCTCAGCCGCCGCTCGGTGCTCGTGTGCAACTGCTACGCGGCGCGCCCGGAGCGCGTGCACGCGCGCTTCCCCGGCCTGCGCTCGCTGAGCGTGAAGGGGAGGCCGCGCTTTGTCCCCGCGGGGTGGGGTGCCGCGGCGCGGCCATGGGTGGCCGCGTGCGTCGCCGCGTGCCCTGGCCTCGAGGAGCTCCGGCTGAAGCGGATGGTTGTCACTGATGGGTGCCTCAAGCTGCTCGCTTGCTCATTCCCCAATTTGAAGTCGCTCGTCCTTGTTGGCTGTCAGGGGTTCAGCACTGATGGGCTTGCTACTGTCGCTACCAATTGCAGATTTATGAAGGAACTGGACTTACCAGAGA ] [+] EMBL CB668211 [ TGCACATTTATGAAGGAACTGGACTTACAAGAGAGTCTGGTGGAGGATCGAGACTCTCGTTGGCTTGGATGTTTTCCCAAGCCTTCTACATTACTAGAATCCTTGAATTTTTCTTGCTTGACCGGGGAGGTGAATAGTCCTGCATTGGAAATACTGGTTGCA AGGAGTCCAAATCTTAGAAGCTTGAGATTGAACCGTTCAGTTCCACTTGATGTTTTGGCCAGAATTCTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTACGAGGCAATATTGTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTGCTGAAGAGTTTATCTGGGTTTTGGGATGCTACAAGCTTGTTTATTCCAGTGATTGCTCCTGTTTGCAAGAATCTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTATCTTATTGAATTTATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATTGGTGATGAAGGATTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTATTTCCTGCGAATGCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATATCTGCAGGCTGTAACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCTGCACTGATTACTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGGATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATCGT ] [+] EMBL CB635386 [ TGGTT CATAGGAGTCCAAATCTTAGAAGCTTGAGATTGAACCGTTCAGTTCCACTTGATGTTTTGGCCAGAATTCTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTACGAGGCAATATTGTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTGCTGAAGAGTTTATCTGGGTTTTGGGATGCTACAAGCTTGTATATTCCAGTGATTGCTCCTGTTTGCAAGAATCTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTATCTTATTGAATTTATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATTGGTGATGAAGGATTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTATTTCCTGCGAATGCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATATCTGCAGGCTGTAACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCTGCACTGATTACTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGGATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTTTGGGGCAATCGTACAGTCATGCAAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTGTTCCTCTACATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGACGATGGCATGACCTACGTGC ] [+] EMBL CA999544 [ CTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGGATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATCGTACAGTCATGCAAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTGTTCCTCTACATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGACGATGGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAAACCAGGGACAGTCCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCAATGCGCTCACTCTGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTT ] [-] EMBL CB634795 [ GTTCCTTTACATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGACGATGGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAAATCAGGGACAGTCCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCAATGCGCTCACTCTGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTTGCAGCAAGCATGGCAAACCTCAACATCGAGGTCATGAATAGAGCAGCAAGTATCAATGAGGCAGACAATGCTAATGATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTGCTGGACCGAGGGGTGATGCGCCTGAATTCATCTCAACGTTCTAAATCCATATATTTTTGAAGTTGAAGGTTTGTTCTTCGACAACCACCTTTTGTTTATATCATACTCTGCTACGTCGAGTTGATCTACATGTTCTAAAGATCTATCTATCTTCACGGTCGAAGGGATCTTCTAGGATTATTTTGTGTAAATTCCTTTGCTATCACCTCTGCTATGTCATTATCTTCCAGCAGTGCTACACTTATGATTAATCTCCAAAATTGAAACTCTATATTTATGGTTAACTTGGCAGATTGATTACACATCATGGTAACATCTAAGCCTTGTCGTAATACCATAATTCTAGCAAGTCATATGCGTGGTTCATCTTCATGTATATACGATTTCATATCGATGCTCTCATGTAATGTCTGGGAAATTTGAAGTGCCAAAaaaaaag ] [-] EMBL CB634482 [ AGCAAGCATGGCAACCCTCAACATCGAGGTCATGAATAGATCAGCAAGTATCAATGAGGCAGACAATGCTCATGATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTATTGGACCGAGGGGTGATGCGCCTGAATTCATCTCAACGTTTTAAATCCATATATTTTTGAAGTTGAAGGTTTGTTCTTCGACACCCACCTTTTATAAATATCATACTCTGCTACGTCGAGTTGATCTACATGTTCTAAAGATCTATCTATCTTCCCGGTTGAAGGGATCTTCTAGGATTATTTTGTGTAAATTCCTTTGCTATCACCTCTGCTATGTCATTATCTTCCAGCAGTGCTACACTTATGATTAATCTCCAAAATTGAAACTCTATAGTTATGGTTAACTTGGCAGATTGATTACACATCATGGTAACATATAAGCCTTGTCGTAATAGCATAATTCTAGCAAGTCATATGCGTGGTTCATCTTCATGTATATACGATTTCATATCGATGCTCTCAAAAAGGGTCTGGGA ] [-] EMBL CB668212 [ TTAATCTCCAAAATTGAAACTCTATAGTTATGGTTAACTTGGCAGATTGATTACACATCATGGTAACATCTAAGCCTT GTAATACCATAATTCTAGCAAGTCATATGCGTGGTTCATCTTCATGTATATACGATTTCATATCGATGCTCTCATGTAATGTCTGGGAAATTTGAAGTGCCAAATTGTTACTTTTCTGAGTCGAAAGATATGATCAGTTAAGCCTGATGAACAGCTGATTCAGTAGTTGGACCCTCCAATTTGTTGCAGCATTTCAGCACTGGTCAAGACTAATCTGTGATTTACAAGTTGAGAATTTGAGTAGATCCCCATCCTGTTTACCTTCAAATACTCTGAAATTTTTCTTTCTGATGTCGCAATCCAATGTCCATGTCGCTGCAAGACAGGGTGGCTTGGAAGTCAGTCATCTCGCTGTCAGTTGTAGCGTGGGGGTGTACTGGTGTTGCTCACAGTTTGATATCATCATCATGGCCATCACACAACATGCTTATTCCTGCACGGTTTAGCAAGCTTTAATTGACCACCATCATCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGAGTCCAAATTCCAAAATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATTGGATATACGGACACACATTTGAAGTATTAAATGTAATCTAATAACACAGTAAATTATAGATTCCGCCTGTAAACTGCTTGGTGGATTTATTGAGCCTAATTAATCCGTTATTAGTAAAAAAAAAGA] consensusID : consensus_13024#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 236 fasta sequence [TCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGTGTCCAAATTCCAAAATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATCGGATATACGGACACATATTTGAAGTATTAAAAGTATTAAATGTAATCTAATAACCCAATAAATTAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762757 [TCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGTGTCCAAATTCCAAAATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATCGGATATACGGACACATATTTGAAGTATTAAAAGTATTAAATGTAATCTAATAACCCAATAAATTAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762758 [TCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGTGTCCAAATTCCAAAATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATCGGATATACGGACACATATTTGAAGTATTAAAAGTATTAAATGTAATCTAATAACCCAATAAATTAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762756 [TCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGTGTCCAAATTCCAAAATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATCGGATATACGGACACATATTTGAAGTATTAAAAGTATTAAATGTAATCTAATAACCCAATAAATTAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13024#0 ACCCTCACCTCCACTCCCCCCTCGCCGGAGCCACGGCGACCCTCTCCACCCCCTGCCTTG 60 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CCGCCGGCGAGTGTCCTTGCGTGCGCCGCCGGTGAGCGGGTGTGGATCCCAGCGGCGGCG 120 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CGATCGGCCTTCGAATCGAACTGAAAGCTGAACCCTCGTTGCCACTGCTGTGAACATGTC 180 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CCAAATTGAGAAGATCGTATGAGCTATGGGGAATTATTAGGATTCTTGGAGGCGGCGGCG 240 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GCATATGGTGTTCTTCCCGGAGGAGGTGGTGGAGCACATCCTTGGGTTTCTAGCGTCGCA 300 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CCGCGACCGCAACGCGGTGTCGCTGGTGTGCCGGGAGTGGTACCGCGTCGAGCGCCTCAG 360 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CCGCCGCTCGGTGCTCGTGCGCAACTGCTACGCGGCGCGCCCGGAGCGCGTGCACGCGCG 420 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CTTCCCCGGCCTGCGCTCGCTGAGCGTGAAGGGGAGGCCGCGCTTTGTCCCCGCGGGGTG 480 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GGGTGCCGCGGCGCGGCCATGGGTGGCCGCGTGCGTCGCCGCGTGCCCTGGCCTCGAGGA 540 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GCTCCGGCTGAAGCGGATGGTTGTCACTGATGGGTGCCTCAAGCTGCTCGCTTGCTCATT 600 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CCCCAATTTGAAGTCGCTCGTCCTTGTTGGCTGTCAGGGGTTCAGCACTGATGGGCTTGC 660 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TACTGTCGCTACCAATTGCAGATTTATGAAGGAACTGGACTTACAAGAGAGTCTGGTGGA 720 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GGATCGAGACTCTCGTTGGCTTGGATGTTTTCCCAAGCCTTCTACATTACTAGAATCCTT 780 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GAATTTTTCTTGCTTGACCGGGGAGGTGAATAGTCCTGCATTGGAAATACTGGTTGCAAG 840 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GAGTCCAAATCTTAGAAGCTTGAGATTGAACCGTTCAGTTCCACTTGATGTTTTGGCCAG 900 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 AATTCTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTACGAGGCAA 960 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TATTGTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTGCTGAAGAG 1020 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TTTATCTGGGTTTTGGGATGCTACAAGCTTGTTTATTCCAGTGATTGCTCCTGTTTGCAA 1080 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GAATCTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTATCTTATTGA 1140 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 ATTTATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATTGGTGATGA 1200 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 AGGATTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTATTTCCTGC 1260 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GAATGCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATATCTGCAGG 1320 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CTGTAACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCTGCACTGAT 1380 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TACTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGG 1440 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 ATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATCGTACAGTC 1500 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 ATGCAAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTGTTCCTCTA 1560 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGA 1620 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CGATGGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAAATCAGGGA 1680 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CAGTCCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCAATGCGCTC 1740 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 ACTCTGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTTGCAGCAAGCAT 1800 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GGCAAACCTCAACATCGAGGTCATGAATAGAGCAGCAAGTATCAATGAGGCAGACAATGC 1860 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TAATGATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTGCTGGACCGAGGGG 1920 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TGATGCGCCTGAATTCATCTCAACGTTCTAAATCCATATATTTTTGAAGTTGAAGGTTTG 1980 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TTCTTCGACAACCACCTTTTGTTTATATCATACTCTGCTACGTCGAGTTGATCTACATGT 2040 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TCTAAAGATCTATCTATCTTCACGGTCGAAGGGATCTTCTAGGATTATTTTGTGTAAATT 2100 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CCTTTGCTATCACCTCTGCTATGTCATTATCTTCCAGCAGTGCTACACTTATGATTAATC 2160 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TCCAAAATTGAAACTCTATAGTTATGGTTAACTTGGCAGATTGATTACACATCATGGTAA 2220 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 CATCTAAGCCTTGTAATACCATAATTCTAGCAAGTCATATGCGTGGTTCATCTTCATGTA 2280 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TATACGATTTCATATCGATGCTCTCATGTAATGTCTGGGAAATTTGAAGTGCCAAATTGT 2340 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TACTTTTCTGAGTCGAAAGATATGATCAGTTAAGCCTGATGAACAGCTGATTCAGTAGTT 2400 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GGACCCTCCAATTTGTTGCAGCATTTCAGCACTGGTCAAGACTAATCTGTGATTTACAGT 2460 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TTGAGAATTTGAGTAGATCCCCATCCTGTTTACCTTCAAATACTCTGAAATTTTTCTTTC 2520 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TGATGTCGCAATCCAATGTCCATGTCGCTGCAAGACAGGGTGGCTTGGAAGTCAGTCATC 2580 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 TCGCTGTCAGTTGTAGCGTGGGTGTACTGGTGTTGCTCACAGTTTGATATCATCATCATG 2640 consensus_13024#1 ------------------------------------------------------------ consensus_13024#0 GCCATCACACAACATGCTTATTCCTGCACGGTTTAGCAAGCTTTAATTGACCACCATCAT 2700 consensus_13024#1 -----------------------------------------------------------T 1 * consensus_13024#0 CGCTTGCTGTTTGATCATTAGTACTACATCAATTGGAGTCCAAATTCCAAAATGTTTGGT 2760 consensus_13024#1 CGCTTGCTGTTTGATCATTAGTACTACATCAATTGGTGTCCAAATTCCAAAATGTTTGGT 61 ************************************ *********************** consensus_13024#0 TATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTG 2820 consensus_13024#1 TATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACTTGTTTAGTTG 121 ************************************************************ consensus_13024#0 GGGAAAATTTTTATATTTGATTGTCACATTGGATATACGGACACACATTTGAAGTATTAA 2880 consensus_13024#1 GGGAAAATTTTTATATTTGATTGTCACATCGGATATACGGACACATATTTGAAGTATTAA 181 ***************************** *************** ************** consensus_13024#0 A---------TGTAATCTAATAACACAGTAAATTATAGATTCCGCCTGTAAACTGCTTGG 2931 consensus_13024#1 AAGTATTAAATGTAATCTAATAACCCAATAAATTAAAAAAAAAAAAAAAAAAAAA----- 236 * ************** ** ******* * * *** consensus_13024#0 TGAATTTATTGAGCCTAATTAATCCGTTATTAGTAAAAAAAAAGA 2976 consensus_13024#1 --------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||