These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13029#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2428 fasta sequence [CAAGCACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTATGTCCCAGTGCAACTTTTAAGCTGTTGGCTCTTCATGCCTTACTTTATGCTTGCATAGCATATCTCATGCCCTTCTTGGACGATATCATGTGTAGCATGCTACGCTACATTCAAAATTTTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCATTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGACATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCTACACAAATGCCATGGTGGTTGTTACCTCTAACCATATTATATTACCATTGCATTTATATCTTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGTTGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTGTGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTTACACA-CCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTCTTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAATTGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTACTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACTATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGGTTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGCGATATGCTGATTTTTTTTTCTTAAAAAA] [+] EMBL AK067287 [CAAGCACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTATGTCCCAGTGCAACTTTTAAGCTGTTGGCTCTTCATGCCTTACTTTATGCTTGCATAGCATATCTCATGCCCTTCTTGGACGATATCATGTGTAGCATGCTACGCTACATTCAAAATTTTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCATTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGACATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCTACACAAATGCCATGGTGGTTGTTACCTCTAACCATATTATATTACCATTGCATTTATATCTTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGTTGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTGTGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTTACACA CCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTCTTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAATTGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTACTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACTATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGGTTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGCGATATGCT ] [+] EMBL CB662094 [ ATCCCCCCCTATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC ATGCCTGCACATTCTGGAAGACCATCGCCAAACCG ] [+] EMBL CF304533 [ GGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTG ] [+] EMBL CF305127 [ GGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATA ] [+] EMBL CF304319 [ TTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCATTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGACATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCT ] [+] EMBL BM420203 [ TTATTT TTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAATAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCCAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCC AATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGC ATATTTCCATTTGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCTAAAAAAAa ] [-] EMBL CF312808 [ TTTAAAATTTTTCTAATTTACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGTTGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTGTGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTTACACACCCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTCTTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAATTGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTACTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACTATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGGTTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGCGGTATGCTGATTTTTTTTTCTTAAAAAA] consensusID : consensus_13029#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 780 fasta sequence [CTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTTTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATTTTTGTTAGCTTGGTTCCAAGTGCCCCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAA-GGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTC-AAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTG-TGGGGGATGTTACTGATACA-CGAGCTTTTGATCTACACAAATGCC-TGGTGGGTTGTTACCTCTAAC-CATATTATATTACCATTGCATTTATAT-C-TTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTAT] [-] EMBL CB662095 [CTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTTTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATTTTTGTTAGCTTGGTTCCAAGTGCCCCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAA GGCGATCAATGCCCCAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATTTTCAGTTC AAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTG TGGGGAATTTTACTAATACA CAACCTTTTAAT ] [+] EMBL CF312807 [ TTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAA GGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTC AAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGGATGTTACTGATACA CGAGCTTTTGATCTACACAAATGCC TGGTGGGTTGTTACCTCTAAC CATATTATATTACCATTGCATTTATAT C TTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTAT] [+] EMBL AU101145 [ ccgGTTTGTCTTCAANGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCNAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTG TTGGGGATGTTACTGATACAGCGAGCTTTTGATCTACACAAATGCCATGGT GGTTGTTACCTCTAACGCATATTATATTAGCATTGCATTTATATNCNTTAAGATTTAA ] consensusID : consensus_13029#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 743 fasta sequence [ACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACC--TCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCT] [+] EMBL AK120138 [ACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACC TCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCT] [+] EMBL CF304606 [ GATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTTCTTACAGGTTTTGGGGTCTACCTTACATGAATATAATGGCTACTATTGAAACCAAAAATAACTCCGTGATTGGTGCACTGATTTA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13029#0 CAAGCACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCAT 60 consensus_13029#2 -----ACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCAT 55 consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 CCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCT 120 consensus_13029#2 CCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCT 115 consensus_13029#1 ------------------------------------------CTTGATCTGTGCATTCCT 18 ** * ** ** consensus_13029#0 CGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCC 180 consensus_13029#2 CGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCC 175 consensus_13029#1 TCCATTAACCTTTATTAGATTCCTTTTGATTCTC------CTTTACTGAAGAATTACAGC 72 ** * * ** * * **** * ** ** * * * * consensus_13029#0 CTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGA 240 consensus_13029#2 CTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGA 235 consensus_13029#1 GGAAGGTGCCACG-TTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAAT 131 * * ** *** ***** * * * * * * *** consensus_13029#0 TCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACC 300 consensus_13029#2 TCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACC 295 consensus_13029#1 TGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACC--TCATCACTCGAGCATTACTT 189 * * * * * * ***** *** ** * ** ** * ** consensus_13029#0 TTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATC 360 consensus_13029#2 TTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACC----------------- 338 consensus_13029#1 TTGATGATAAGCTGAT-AACCTTCTGACAATCTTTATAGTTTTG---------------- 232 *** * ** * * * ** ** ** ** ** * consensus_13029#0 TCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATG 420 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 CACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATT 480 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 AACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCAC 540 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 GTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGT 600 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGA 660 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCAT 720 consensus_13029#2 -------------------------------TCTTACAGGTTTTGGGGTCTACCTTCCAT 367 consensus_13029#1 ----------------------------AAGTCTTACAGGTTTTGGGGTCTACCTTCCAT 264 ***************************** consensus_13029#0 GAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC 780 consensus_13029#2 GAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC 427 consensus_13029#1 GAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC 324 ************************************************************ consensus_13029#0 AATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTG 840 consensus_13029#2 AATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTG 487 consensus_13029#1 AATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTG 384 ************************************************************ consensus_13029#0 AGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGC 900 consensus_13029#2 AGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGC 547 consensus_13029#1 AGTCATTTTTGTTAGCTTGGTTCCAAGTGCCCCTCTACTAGCTAGCGATGATGAGTTCGC 444 ****** * ** ****************** ***************************** consensus_13029#0 TACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAAT 960 consensus_13029#2 TACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAAT 607 consensus_13029#1 TACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAAT 504 ************************************************************ consensus_13029#0 TGGTATGTCCCAGTGCAACTTTTAAGCTGTTGGCTCTTCATGCCTTACTTTATGCTTGCA 1020 consensus_13029#2 TGGTGCTTATATTGGCAATATTT---CCATTCG------GTGCATTGATCTTCAGTT--- 655 consensus_13029#1 TGGTGCTTATATTGGCAATATTT---CCATTCG------GTGCATTGATCTTCAGTT--- 552 **** * **** *** * ** * *** ** * * ** consensus_13029#0 TAGCATATCTCATGCCCTTCTTGGACGATATCATGTGTAGCATGCTACGCTACATTCAAA 1080 consensus_13029#2 CAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGT----TGTCATTGTCAAA 711 consensus_13029#1 CAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGT----TGTCATTGTCAAA 608 * *** * *** ** * * *** * ** * * * * ***** consensus_13029#0 ATTTTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCA 1140 consensus_13029#2 TGTTTGTTGGGGATGTTACTGATA--CACGAGCT-------------------------- 743 consensus_13029#1 TGTTTGTGGGGGATGTTACTGATA--CACGAGCTTTTGATCTACACAAATGCCTGGTGGG 666 *** * * * * * *** ** ** * consensus_13029#0 TTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGAC 1200 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 TTGTTACCTCTAACCATATTATATTACCATTGCATTTATATCTTAAGATTTAAATTGCAT 726 consensus_13029#0 ATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTT 1260 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 TTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTAT------ 780 consensus_13029#0 TGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTA 1320 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 CTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCA 1380 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCT 1440 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATT 1500 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 GGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTC 1560 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTC 1620 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 CATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTC 1680 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCT 1740 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 ACACAAATGCCATGGTGGTTGTTACCTCTAACCATATTATATTACCATTGCATTTATATC 1800 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATT 1860 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGT 1920 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTG 1980 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTT 2040 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 ACACACCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTC 2100 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAAT 2160 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTA 2220 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 CTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACT 2280 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 ATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGG 2340 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 TTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGC 2400 consensus_13029#2 ------------------------------------------------------------ consensus_13029#1 ------------------------------------------------------------ consensus_13029#0 GATATGCTGATTTTTTTTTCTTAAAAAA 2428 consensus_13029#2 ---------------------------- consensus_13029#1 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||