cluster # 13036

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Oryza sativa
cluster # 13036 cluster # 13036 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13036#0 length = 1069 sequences # 10

consensus_13036#1 length = 772 sequences # 1
consensus_13036#2 length = 408 sequences # 1

consensusID : consensus_13036#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1069
fasta sequence

                              [GCGAGACACCGGCGGCCATAGCTCGAGAGCTCGAGGTCAACCCGAAAGCCACGCACGCGCCGCGCAATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCCGGGCGGCGGTGCCCCTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCGAGCGGGGGCAGGTGGTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCGGCGCCGGGAACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGG-CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGACATATATTTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGATATATATTTGCGGTTGGACAGAATACTGATATTTTGCTAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073760             [GCGAGACACCGGCGGCCATAGCTCGAGAGCTCGAGGTCAACCCGAAAGCCACGCACGCGCCGCGCAATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCCGGGCGGCGGTGCCCCTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCGAGCGGGGGCAGGTGGTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCGGCGCCGGGAACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGG CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGACATATATTTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGATATATATTTGCGGTTGGACAGAATACTGATATTTTGCTAA                ]
[+] EMBL CB662116             [           GCGGCCATAGCTCGAGAGCTCGAGGTCAACCCGAAAGCCACGCACGCGCCGCGCAATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCCGGGCGGCGGTGCCCCTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCGAGCGGGGGCAGGTGGTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCGGCGCCGGGAACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGG CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGATTTTGCAAGATCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCATAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTA                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB665904             [                    GCTCGAGAGCTCGAGGTCAACCCGAAAGCCACGCACGCGCCGCGCAATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCCGGGCGGCGGTGCCCCTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCGAGCGGGGGCAGGTGGTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCGGCGCCGGGAACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGG CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAA                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI978338             [                                                                                                                                                                                                                                        GCGCCGGGAACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGG CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATNNNNNTTAGGAATATGCACAGACTTTnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB665905             [                                                                                                                                                                                                                                                                      ACAAACAGATAGAGAAGATGGTGGATGAGG CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGACATATATTTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGATATATATTTGCGGTTGGACAGAATACTGAaaaaaagga                  ]
[-] EMBL CB662117             [                                                                                                                                                                                                                                                                           CAGATAGAGAAGATGGTGGATGAGG CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGACATATATTTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGATATATATTTGCGGTTGGACAGAATACTGA                           ]
[-] EMBL CB631760             [                                                                                                                                                                                                                                                                                 GAGAAGATGGTGGATGAGGCCCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCCCGCACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGACCCTTGGCTCATCCTCAGGATCTAATGCCCCCCATGGGACTTTCCATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTACCCCAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTCCAAAAGTCTGACATATATTTCTTTACTTCTTCCTTTTA                                                                                ]
[+] EMBL OSS1444A             [                                                                                                                                                                                                                                                                                                                                                   TGCGTTTCTTGACACCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB665909             [                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATTGATGGTTATCTTGGAGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTGGGGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGCGTTTTGGATTTTGCAAGTTCAGCTTTGGGCGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGAAGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAGCCTCCCAGTTGAAGTAGCCAGGAGTATGCAAG                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CF324903             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACAATCTGATATATATTTGCGGTTGGACAGAATACTGATATTTTGCTAAAAAAAAAAAAAAAAAA]




>consensus_13036#0
GCGAGACACCGGCGGCCATAGCTCGAGAGCTCGAGGTCAACCCGAAAGCCACGCACGCGC
CGCGCAATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCCGGGCGGCG
GTGCCCCTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCGAGCGGGGG
CAGGTGGTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCGGCGCCGGG
AACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGGCCGCTAGG
CTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTAC
CCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAAT
TTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGAT
TGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGG
GTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTT
TTGGATTTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAA
GATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGG
AGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATG
GCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAA
ACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGG
GACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCT
GACATATATTTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTGATATATAT
TTGCGGTTGGACAGAATACTGATATTTTGCTAAAAAAAAAAAAAAAAAA

consensusID : consensus_13036#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 772
fasta sequence

                              [ATGGAACCTTTTCTCTTACATCTGTAGCATGTTGGGCACTCTTTGCCACAGGATATCTATTAGTTTTTATTCTCTGGACNCTCAGGCATAGGACACTTTCCAGTCTGCACATCCATGCTATATAGAGTTCCTTACAAAACCGTGTCTCACCAATCATGAGAACACTTCATCCATTCCCTTGCAGACTTGACCTTAATGTGATTGCCGGGTATATTCAACAGGGTAAAGAACTAAAGATATCATCTTGTTGTCATCCTCACAAGGGTTTAATAAACCACAGATGCACAAAACACCAAACATGGATATCTAACAAGTGAAATTAACCCGGACAGAATTCATTTATTTCCCTTTTTACTTATATAGTTACTCCATGGACATAACGATATCAACTTTACCTTCAATAAAAATAAACATCAATGAGTATTCCATAAATCCATACTTTATGATTAACCTGCTTAACCTTCTAATGATGCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGNTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGNTTGGNTTTTATTGCTGGGACGATGATCCTAGNGGTCTCTTTACTTTCTTCCTTTTATCTCTTCAATGNACAACAATCTGACATANATTTCTTTACTTCTTCCTTTTTATCTCCTCAATGNACAACCAATCTGATATATATTTGGCGGTTGGACAGAATACTGAT]

[+] EMBL CA764920             [ATGGAACCTTTTCTCTTACATCTGTAGCATGTTGGGCACTCTTTGCCACAGGATATCTATTAGTTTTTATTCTCTGGACNCTCAGGCATAGGACACTTTCCAGTCTGCACATCCATGCTATATAGAGTTCCTTACAAAACCGTGTCTCACCAATCATGAGAACACTTCATCCATTCCCTTGCAGACTTGACCTTAATGTGATTGCCGGGTATATTCAACAGGGTAAAGAACTAAAGATATCATCTTGTTGTCATCCTCACAAGGGTTTAATAAACCACAGATGCACAAAACACCAAACATGGATATCTAACAAGTGAAATTAACCCGGACAGAATTCATTTATTTCCCTTTTTACTTATATAGTTACTCCATGGACATAACGATATCAACTTTACCTTCAATAAAAATAAACATCAATGAGTATTCCATAAATCCATACTTTATGATTAACCTGCTTAACCTTCTAATGATGCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGNTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGNTTGGNTTTTATTGCTGGGACGATGATCCTAGNGGTCTCTTTACTTTCTTCCTTTTATCTCTTCAATGNACAACAATCTGACATANATTTCTTTACTTCTTCCTTTTTATCTCCTCAATGNACAACCAATCTGATATATATTTGGCGGTTGGACAGAATACTGAT]




>consensus_13036#1
ATGGAACCTTTTCTCTTACATCTGTAGCATGTTGGGCACTCTTTGCCACAGGATATCTAT
TAGTTTTTATTCTCTGGACNCTCAGGCATAGGACACTTTCCAGTCTGCACATCCATGCTA
TATAGAGTTCCTTACAAAACCGTGTCTCACCAATCATGAGAACACTTCATCCATTCCCTT
GCAGACTTGACCTTAATGTGATTGCCGGGTATATTCAACAGGGTAAAGAACTAAAGATAT
CATCTTGTTGTCATCCTCACAAGGGTTTAATAAACCACAGATGCACAAAACACCAAACAT
GGATATCTAACAAGTGAAATTAACCCGGACAGAATTCATTTATTTCCCTTTTTACTTATA
TAGTTACTCCATGGACATAACGATATCAACTTTACCTTCAATAAAAATAAACATCAATGA
GTATTCCATAAATCCATACTTTATGATTAACCTGCTTAACCTTCTAATGATGCAGGATCT
AATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGNTGTTGACAGAAT
CATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGAT
TATCTAGNTTGGNTTTTATTGCTGGGACGATGATCCTAGNGGTCTCTTTACTTTCTTCCT
TTTATCTCTTCAATGNACAACAATCTGACATANATTTCTTTACTTCTTCCTTTTTATCTC
CTCAATGNACAACCAATCTGATATATATTTGGCGGTTGGACAGAATACTGAT

consensusID : consensus_13036#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 408
fasta sequence

                              [AGATCNNNNNNGTANNGGTTTTANGANTATGCACAGACNNNNGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCANNAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTG]

[-] EMBL AI978339             [AGATCNNNNNNGTANNGGTTTTANGANTATGCACAGACNNNNGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCANNAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTG]




>consensus_13036#2
AGATCNNNNNNGTANNGGTTTTANGANTATGCACAGACNNNNGTGTTTTGGATTTTGCAA
GTTCAGCTTTGGCTGCCANNAACATTGGCCGAGTGCCTCCGCTGGAAGATGTTGTCATTT
ATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATGCAAGGAA
CCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAAAGCAGGG
GTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGGTGTAAAACTAACACAAGAC
TGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTATTGCTGGGACGATGATCCTA
GTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13036#0      GCGAGACACCGGCGGCCATAGCTCGAGAGCTCGAGGTCAACCCGAAAGCCACGCACGCGC 60
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      ------------------------------------------------------------
                                                                                   

consensus_13036#0      CGCGCAATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCCGGGCGGCG 120
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      ------------------------------------------------------------
                                                                                   

consensus_13036#0      GTGCCCCTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCGAGCGGGGG 180
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      ------------------------------------------------------------
                                                                                   

consensus_13036#0      CAGGTGGTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCGGCGCCGGG 240
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      ------------------------------------------------------------
                                                                                   

consensus_13036#0      AACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGGCCGCTAGG 300
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      --------------------------------ATGGAACCTTTTCTCTTACATCTGTAGC 28
                                                                                   

consensus_13036#0      CTCGCCAAGGTGTTCTGCGAGAGGA-ACTGGCCAGTCTTTGCGTTTCTTGACACCCACTA 359
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      ATGTTGGGCACTCTTTGCCACAGGATATCTATTAGTTTTTAT-TCTCTGGACNCTCAGGC 87
                                                                                   

consensus_13036#0      CCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAA 419
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      ATAGGACACTTTCCAG---TCTGCACATCCATGCTATATAG--AGTTCCTTACAAAACCG 142
                                                                                   

consensus_13036#0      TTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGA 479
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      TGTCTCACCAATCATGAGAACACTTCATCCATTCCCTTGCAGACTTGACCTTAATGTGAT 202
                                                                                   

consensus_13036#0      TTGTATTGATGGTTATCTTGGTGCATT-TGAGAAAGATGGCTCAAATGTT-TTTTCAGAT 537
consensus_13036#2      ------------------------------------------------------------
consensus_13036#1      TGCCGGGTATATTCAACAGGGTAAAGAACTAAAGATATCATCTTGTTGTCATCCTCACAA 262
                                                                                   

consensus_13036#0      TGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGT 597
consensus_13036#2      ----------------AGATCNNNNNNGTANNGGTTTTANGANTATGCACAGACNNNNGT 44
consensus_13036#1      GGGTTTAATAAACCACAGATGCACAAAACACCAAACATGGATATCTA-ACAAGTGAAATT 321
                                       ****         *       *     * *  ***        *

consensus_13036#0      GTTTTGGATTTTGCAAGTTCAGCTT--TGGCTGCCAGGAACATTGGCCGAGTGCCTCCGC 655
consensus_13036#2      GTTTTGGATTTTGCAAGTTCAGCTT--TGGCTGCCANNAACATTGGCCGAGTGCCTCCGC 102
consensus_13036#1      AACCCGGACAGAATTCATTTATTTCCCTTTTTACTTATATAGTTACTCCATGGACATAAC 381
                            ***         ** *  *   *   * *    *   **   * *  * *    *

consensus_13036#0      TGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAG 715
consensus_13036#2      TGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAG 162
consensus_13036#1      GATATCAACTTTACCTTCAATAAAAATAAACATCAATGAGTATTCCATAAATCCATACTT 441
                          *  *  **  * ** * * * *        * * *  **  *    * *  *     

consensus_13036#0      CCAGGAGTATGCAAGGAACCTTGGCTCATCCT-CAGGATCTAATGCACCACATGGGACTT 774
consensus_13036#2      CCAGGAGTATGCAAGGAACCTTGGCTCATCCT-CAGGATCTAATGCACCACATGGGACTT 221
consensus_13036#1      TATGATTAACCTGCTTAACCTT--CTAATGATGCAGGATCTAATGCACCACATGGGACTT 499
                          *    *       ******  ** **  * ***************************

consensus_13036#0      TACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGG 834
consensus_13036#2      TACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGAGG 281
consensus_13036#1      TACATGGCAAAAAGCAGGGGTGCAAAGGNTGTTGACAGAATCATTATTTAAGATTAGAGG 559
                       **************************** *******************************

consensus_13036#0      TGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTAT 894
consensus_13036#2      TGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTTAT 341
consensus_13036#1      TGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGNTTGGNTTTTAT 619
                       ************************************************ **** ******

consensus_13036#0      TGCTGGGACGATGATCCTAGTGTTCTCTTTACTT-CTTCCTTTTATCTCTTCAATGTACA 953
consensus_13036#2      TGCTGGGACGATGATCCTAGTGTTCTCTTTACTT-CTTCCTTTTATCTCTTCAATGTACA 400
consensus_13036#1      TGCTGGGACGATGATCCTAGNGGTCTCTTTACTTTCTTCCTTTTATCTCTTCAATGNACA 679
                       ******************** * *********** ********************* ***

consensus_13036#0      ACAATCTGACATATATTTCTTTACTTCTTCCTTTT-ATCTCTTCAATGTACAAC-AATCT 1011
consensus_13036#2      ACAATCTG---------------------------------------------------- 408
consensus_13036#1      ACAATCTGACATANATTTCTTTACTTCTTCCTTTTTATCTCCTCAATGNACAACCAATCT 739
                       ********                                                    

consensus_13036#0      GATATATATTTG-CGGTTGGACAGAATACTGATATTTTGCTAAAAAAAAAAAAAAAAAA 1069
consensus_13036#2      -----------------------------------------------------------
consensus_13036#1      GATATATATTTGGCGGTTGGACAGAATACTGAT-------------------------- 772