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Oryza sativa
cluster # 13054 cluster # 13054       Sequences # 12       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13054#0 length = 1855 sequences # 4  
consensus_13054#1 length = 1702 sequences # 5  
consensus_13054#2 length = 783 sequences # 1  
consensus_13054#3 length = 574 sequences # 1  
consensus_13054#4 length = 444 sequences # 1  

consensusID : consensus_13054#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1855
fasta sequence
                              [ACGATCCGACACCTGCACGCTAGTACGTAGTGCGTATACGTAGCCAGTACCCTACTCCCGTCCATGGCGCCGCCGCGAGCCAACTCCGGCGACGGTAACGACGGCGCCGTCGGAGGGCAGAGCAAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTACGGCGTGCCCTTCCTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCCGACGAGTTCTTCCGCTCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTTCATGCCGTCGCTCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCTCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCGGCGAGGATGCACCACGTCGCGCCGGCGTTCCGCGCCGCCTTCGCCGCCATGTTCGACGAGGTCGACGCCGGCCTCGTCGCCGGCGGCCCCGTCGAGTTCAACAAGCTCAACATGCGGTACATGCTCGACTTCACCTGCGCCGCGCTGTTCGGCGGCGCGCCGCCGAGCAAGGCCATGGGCGACGCTGCCGTGACGAAGGCGGTGAAGTGGCTCATCTTCCAGCTTCACCCGCTCGCCAGCAAGGTCGTCAAGCCGTGGCCGCTGGAGGACCTCCTCCTCCACACCTTCCGCCTGCCGCCGTTCCTGGTGCGCCGCGAGTACGGCGAGATCACGGCGTACTTCGCCGCCGCCGCCGCGGCCATCCTCGACGACGCCGAGAAGAACCACCCGGGAATCCCGCGCGACGAGCTCCTCCACAACCTCGTGTTCGTCGCCGTCTTCAACGCCTACGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTAGCCTCCGAGGTCCGCGCCGCCGCGCCCGCCGGCGGCGGCGAGATCACCATCTCCGCCGTGGAGAAGGAGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGGCGCGCGCGGCGCGACATGGTCGTCGAGAGCCACGACGCGGCGTACGAGGTCCGCAAGGGGGAGCTGCTGTTCGGGTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCCCCGACCGGTTCGTCTCCGGCGCCGGAAGCGCCGCCCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACCGGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGGGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGAGGAGCTGCCGCTTGAGCCGGTGGTCACGTTCACGTCGCTGACCCGCGCCGCCGACGGCGACGGCGCCGCGCGGCGCGGAGTATAATAGTGTCAAGCGGCGGCGCGCGTGAGCGGCGAGTGTTGGTGCGGCGACGACGCTGTCCATGCATGGTCGCTGTCAGTTGGTCAGATTTGCATGGATTTCTTTTTTCTTTGACCTAAAAAAATTGGGAAAAAGGTGTACTTTCGCGTGCTTGTGGGGGCAGGTTCTTAAGTATAGGGATTCGGTTTGTCATTGTGTGAAGTTCAATACGATGTTTGAAGTTGAATAAAATTATGTGCGTTCCTCGTGGTTTTTCTAAAAA]

[+] EMBL AK105964             [ACGATCCGACACCTGCACGCTAGTACGTAGTGCGTATACGTAGCCAGTACCCTACTCCCGTCCATGGCGCCGCCGCGAGCCAACTCCGGCGACGGTAACGACGGCGCCGTCGGAGGGCAGAGCAAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTACGGCGTGCCCTTCCTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCCGACGAGTTCTTCCGCTCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTTCATGCCGTCGCTCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCTCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCGGCGAGGATGCACCACGTCGCGCCGGCGTTCCGCGCCGCCTTCGCCGCCATGTTCGACGAGGTCGACGCCGGCCTCGTCGCCGGCGGCCCCGTCGAGTTCAACAAGCTCAACATGCGGTACATGCTCGACTTCACCTGCGCCGCGCTGTTCGGCGGCGCGCCGCCGAGCAAGGCCATGGGCGACGCTGCCGTGACGAAGGCGGTGAAGTGGCTCATCTTCCAGCTTCACCCGCTCGCCAGCAAGGTCGTCAAGCCGTGGCCGCTGGAGGACCTCCTCCTCCACACCTTCCGCCTGCCGCCGTTCCTGGTGCGCCGCGAGTACGGCGAGATCACGGCGTACTTCGCCGCCGCCGCCGCGGCCATCCTCGACGACGCCGAGAAGAACCACCCGGGAATCCCGCGCGACGAGCTCCTCCACAACCTCGTGTTCGTCGCCGTCTTCAACGCCTACGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTAGCCTCCGAGGTCCGCGCCGCCGCGCCCGCCGGCGGCGGCGAGATCACCATCTCCGCCGTGGAGAAGGAGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGGCGCGCGCGGCGCGACATGGTCGTCGAGAGCCACGACGCGGCGTACGAGGTCCGCAAGGGGGAGCTGCTGTTCGGGTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCCCCGACCGGTTCGTCTCCGGCGCCGGAAGCGCCGCCCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACCGGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGGGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGAGGAGCTGCCGCTTGAGCCGGTGGTCACGTTCACGTCGCTGACCCGCGCCGCCGACGGCGACGGCGCCGCGCGGCGCGGAGTATAATAGTGTCAAGCGGCGGCGCGCGTGAGCGGCGAGTGTTGGTGCGGCGACGACGCTGTCCATGCATGGTCGCTGTCAGTTGGTCAGATTTGCATGGATTTCTTTTTTCTTTGACCTAAAAAAATTGGGAAAAAGGTGTACTTTCGCGTGCTTGTGGGGGCAGGTTCTTAAGTATAGGGATTCGGTTTGTCATTGTGTGAAGTTCAATACGATGTTTGAAGTTGAATAAAATTATGTGCGTTCC                  ]
[+] EMBL AU184424             [          ACCTGCACGCTAGTACGTAGTGCGTATACGTAGCCAGTACCCTACTCCCGTCCATGGCGCCGCCGCGAGCCAACTCCGGCGACGGTAACGACGGCGCCGTCGGAGGGCAGAGCAAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTACGGCGTGCCCTTCCTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCCGACGAGTTCTTCCGCTCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTNCATGGTGGACAAGGCCGACACGCTCGACGGCACCTTNATGCCGTCGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA755398             [                        ACGTAGTGCGTATACGTAGCCAGTACCCTACTCCCGTCCATGGCGCCGCCGCGAGCCAACTCCGGCGACGGGAACGACGGCGCCGTCGGAGGGCAGAGCAAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTACGGCGTGCCCTTCCTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCCGACGAGTTCTTCCGCTCACGCGTCGCCCGCCACGGCGGGGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTCCATGGAGGACAAGGCCGACACGCTCGACGGCACCTTCATGCCGTCGCTCGCGCTCTTCGGCGGTCACCGGCCGCTCGCCTTCCTCGACGCCGCCGACCCTCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCGGCGAGGATGCACCACGTCGCGCCGGCGTTCCGCGCCGCCTTCGCCGCCATGTTCGACGAGGTCGACGCCGGCCTCGTCGCCGGAGGACTCGTCGAGTTCAACAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU162426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGCGGCGGCGCGCGTGAGCGGCGAGTGTTGGTGCGGCGACGACGCTGTCCATGCATGGTCGCTGTCAGTTGGTCAGATTTGCATGGATTTCTTTTTTCTTTGACCTAAAAAAATTGGGAAAAAGGTGTACTTTCGCGTGCTTGTGGGGGCAGGTTCTTAAGTATAGGGATTCGGTTTGTCATTGTGTGAAGTTCAATACGATGTTTGAAGTTGAATAAAATTATGTGCGTTCCTCGTGGTTTTTCTAAAAA]


>consensus_13054#0 ACGATCCGACACCTGCACGCTAGTACGTAGTGCGTATACGTAGCCAGTACCCTACTCCCG TCCATGGCGCCGCCGCGAGCCAACTCCGGCGACGGTAACGACGGCGCCGTCGGAGGGCAG AGCAAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTACGGCGTGCCC TTCCTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCCGACGAGTTC TTCCGCTCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCC GGCCCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGC GTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTTCATGCCG TCGCTCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCTCGC CACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCGGCGAGGATGCACCACGTCGCG CCGGCGTTCCGCGCCGCCTTCGCCGCCATGTTCGACGAGGTCGACGCCGGCCTCGTCGCC GGCGGCCCCGTCGAGTTCAACAAGCTCAACATGCGGTACATGCTCGACTTCACCTGCGCC GCGCTGTTCGGCGGCGCGCCGCCGAGCAAGGCCATGGGCGACGCTGCCGTGACGAAGGCG GTGAAGTGGCTCATCTTCCAGCTTCACCCGCTCGCCAGCAAGGTCGTCAAGCCGTGGCCG CTGGAGGACCTCCTCCTCCACACCTTCCGCCTGCCGCCGTTCCTGGTGCGCCGCGAGTAC GGCGAGATCACGGCGTACTTCGCCGCCGCCGCCGCGGCCATCCTCGACGACGCCGAGAAG AACCACCCGGGAATCCCGCGCGACGAGCTCCTCCACAACCTCGTGTTCGTCGCCGTCTTC AACGCCTACGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCC GGCCCGGAGCTCCACGCCAAGCTAGCCTCCGAGGTCCGCGCCGCCGCGCCCGCCGGCGGC GGCGAGATCACCATCTCCGCCGTGGAGAAGGAGATGCCGCTGGTGAAGTCGGTGGTGTGG GAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGGCGCGCGCGGCGCGACATG GTCGTCGAGAGCCACGACGCGGCGTACGAGGTCCGCAAGGGGGAGCTGCTGTTCGGGTAC CAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCCCCGAC CGGTTCGTCTCCGGCGCCGGAAGCGCCGCCCGGCCGCTGCTGGAGCACGTGGTGTGGTCG AACGGGCCGGAGACCGGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATG GTGGTGGCGGTGGGGCGGCTGATGGTGGCGGGGCTGTTCCGGCGGTACGACACGTTCGCC GCCGACGTGGAGGAGCTGCCGCTTGAGCCGGTGGTCACGTTCACGTCGCTGACCCGCGCC GCCGACGGCGACGGCGCCGCGCGGCGCGGAGTATAATAGTGTCAAGCGGCGGCGCGCGTG AGCGGCGAGTGTTGGTGCGGCGACGACGCTGTCCATGCATGGTCGCTGTCAGTTGGTCAG ATTTGCATGGATTTCTTTTTTCTTTGACCTAAAAAAATTGGGAAAAAGGTGTACTTTCGC GTGCTTGTGGGGGCAGGTTCTTAAGTATAGGGATTCGGTTTGTCATTGTGTGAAGTTCAA TACGATGTTTGAAGTTGAATAAAATTATGTGCGTTCCTCGTGGTTTTTCTAAAAA



consensusID : consensus_13054#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1702
fasta sequence
                              [CCAACCCAACACAACACTTGCACTTGCACTACGTACTCTCATTTCATCCGCTCCCGGCCGGCAATGGCGCCACCGCCAGTGAACTCCGGCGACGCCGCCGCCGCCGCCACGGGAGAGAAGAGCAAGCTCTCGCCGTCGGGCCTCCCCATACGCGAGATACCCGGCGGCTACGGCGTGCCCTTCTTCTCGCCGCTGCGCGACCGCCTCGACTACTTCTACTTCCAGGGCGCCGAGGAGTACTTCCGATCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCATCTCCGGCAACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTACATGCCGTCGCGCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCGCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCCGCGCGGATGCACCACGTCGCGCCGGCGTTCCGCGCCGCCTTTGCCGCCATGTTCGACGCCGTCGAGGCCGGCCTCGGCGCCGCCGTCGAGTTCAACAAGCTCAACATGAGGTACATGCTCGACTTCACCTGCGCCGCGCTGTTCGGCGGCGAGCCGCCGAGCAAGGTGGTCGGCGACGGCGCCGTGACGAAGGCCATGGCGTGGCTCGCGTTCCAGCTGCACCCGATCGCGAGCAAGGTCGTCAAGCCATGGCCGCTCGAGGAGCTACTCCTGCACACCTTCTCCCTGCCGCCGTTCCTGGTGCGGCGTGGCTACGCCGACCTGAAGGCGTACTTCGCCGACGCCGCCGCGGCCGTCCTCGACGACGCCGAGAAGAGCCACACGGGAATCCCGCGCGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTTCAACGCCTTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGAGGACGACGGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTATTAATCACGCATAAAGTATTAATCATGTTTTATCATCTAACAACAATGAAAA]

[+] EMBL AK107161             [CCAACCCAACACAACACTTGCACTTGCACTACGTACTCTCATTTCATCCGCTCCCGGCCGGCAATGGCGCCACCGCCAGTGAACTCCGGCGACGCCGCCGCCGCCGCCACGGGAGAGAAGAGCAAGCTCTCGCCGTCGGGCCTCCCCATACGCGAGATACCCGGCGGCTACGGCGTGCCCTTCTTCTCGCCGCTGCGCGACCGCCTCGACTACTTCTACTTCCAGGGCGCCGAGGAGTACTTCCGATCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCATCTCCGGCAACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTACATGCCGTCGCGCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCGCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCCGCGCGGATGCACCACGTCGCGCCGGCGTTCCGCGCCGCCTTTGCCGCCATGTTCGACGCCGTCGAGGCCGGCCTCGGCGCCGCCGTCGAGTTCAACAAGCTCAACATGAGGTACATGCTCGACTTCACCTGCGCCGCGCTGTTCGGCGGCGAGCCGCCGAGCAAGGTGGTCGGCGACGGCGCCGTGACGAAGGCCATGGCGTGGCTCGCGTTCCAGCTGCACCCGATCGCGAGCAAGGTCGTCAAGCCATGGCCGCTCGAGGAGCTACTCCTGCACACCTTCTCCCTGCCGCCGTTCCTGGTGCGGCGTGGCTACGCCGACCTGAAGGCGTACTTCGCCGACGCCGCCGCGGCCGTCCTCGACGACGCCGAGAAGAGCCACACGGGAATCCCGCGCGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTTCAACGCCTTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGAGGACGACGGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTATTAATCACGCATAAAGTATTAATCATGTTTTATCATCTAACAACAATGAAAA]
[+] EMBL CB672238             [               ACTTGCACTTGCACTACGTACTCTCATTTCATCCGCTCCCGGCCGGCAATGGCGCCACCGCCAGTGAACTCCGGCGACGCCGCCGCCGCCGCCACGGGAGAGAAGAGCAAGCTCTCGCCGTCGGGCCTCCCCATACGCGAGATACCCGGCGGCTACGGCGTGCCCTTCTTCTCGCCGCTGCGCGACCGCCTCGACTACTTCTACTTCCAGGGCGCCGAGGAGTACTTCCGATCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCATCTCCGGCAACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTACATGCCGTCGCGCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCGCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCCGCGCGGATGCACCACGTCGCGCCGGCGTTCCGCGCCGCCTTTGCCGCCATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB644359             [                                                                                                                                                                                                                                                     ATCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGCCCCTTCATCTCCGGCAACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTACATGCCGTCGCGCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCGCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCCGCGCGGATGCACCACGTCGCGCCGGCGTTCCGCGCCGCCTTTGCCGCCATGTTCGACGCCGTCGAGGCCGGCCTCng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB644360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTTCAACGCCTTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGAGGACGACGGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTATTAATCACGCATAAAGTATTAATCATGTT                       ]
[+] EMBL CB646414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTATTAATCACGCATAAAGTATTAATCATGT                        ]


>consensus_13054#1 CCAACCCAACACAACACTTGCACTTGCACTACGTACTCTCATTTCATCCGCTCCCGGCCG GCAATGGCGCCACCGCCAGTGAACTCCGGCGACGCCGCCGCCGCCGCCACGGGAGAGAAG AGCAAGCTCTCGCCGTCGGGCCTCCCCATACGCGAGATACCCGGCGGCTACGGCGTGCCC TTCTTCTCGCCGCTGCGCGACCGCCTCGACTACTTCTACTTCCAGGGCGCCGAGGAGTAC TTCCGATCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCC GGCCCCTTCATCTCCGGCAACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGC GTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTACATGCCG TCGCGCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCGCGC CACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCCGCGCGGATGCACCACGTCGCG CCGGCGTTCCGCGCCGCCTTTGCCGCCATGTTCGACGCCGTCGAGGCCGGCCTCGGCGCC GCCGTCGAGTTCAACAAGCTCAACATGAGGTACATGCTCGACTTCACCTGCGCCGCGCTG TTCGGCGGCGAGCCGCCGAGCAAGGTGGTCGGCGACGGCGCCGTGACGAAGGCCATGGCG TGGCTCGCGTTCCAGCTGCACCCGATCGCGAGCAAGGTCGTCAAGCCATGGCCGCTCGAG GAGCTACTCCTGCACACCTTCTCCCTGCCGCCGTTCCTGGTGCGGCGTGGCTACGCCGAC CTGAAGGCGTACTTCGCCGACGCCGCCGCGGCCGTCCTCGACGACGCCGAGAAGAGCCAC ACGGGAATCCCGCGCGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTTCAACGCC TTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCG GAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGAGGACGAC GGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCG CTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTC GAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCG CTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTC GTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGG CCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTG GCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGAC GTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCG GGATAGCACGCACGTCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGT TGGTGGATGTTTTAATTGCGTGGTTAATTATTAATCACGCATAAAGTATTAATCATGTTT TATCATCTAACAACAATGAAAA



consensusID : consensus_13054#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 783
fasta sequence
                              [CGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTTCAACGCCTTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGAGGACGACGGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTATTAATCGCGCATAAAGTATTAATCATGTTTTATCAAACCTTAAAAGA]

[-] EMBL CB672239             [CGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTTCAACGCCTTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGAGGACGACGGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTATTAATCGCGCATAAAGTATTAATCATGTTTTATCAAACCTTAAAAGA]


>consensus_13054#2 CGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTTCAACGCCTTCGGCGGCTTCAA GATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGCCCGGAGCTCCACGCCAA GCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGAGGACGACGGCATCACCCTCGC CGCCGTCGAGCGGATGCCGCTGGTGAAGTCGGTGGTGTGGGAGGCGCTGCGCATGAACCC GCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACATGGTGGTCGAGAGCCACGACGC GGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCTACCAGCCGCTCGCCACCCGCGA CGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCGACCGGTTCGTCGCCGGCGGCGC CGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGGC GCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCT GATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCC GGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGTCGTCGGGATAGCACGCACG TCGACGTCACGTGCGCGCCGTGCTGTGATTTAGTACTGTACTAGGTTGGTGGATGTTTTA ATTGCGTGGTTAATTATTAATCGCGCATAAAGTATTAATCATGTTTTATCAAACCTTAAA AGA



consensusID : consensus_13054#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 574
fasta sequence
                              [GCCCGGCGAGTTCGTCCCGACCGGTTCGTCCCGCCGGCGACCGGCCGCTGGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGCGGAGATGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGGCTTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGACCTGTGATTTAGTACTGTAGTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTTTTCGCATGGAGTTCTTGATTTGCCGGGTGACCGGGGTGGGGTGAAAGTGTTTGAATTCAACTTTTGATTTTATGTAAAGTTTGATTAATTAATTTGTTACAAGGGGAAATGAATAATGTAGTGATATGATCCTACTGCTAGTCTGCTATGGTGGATATGTGAGTTGATTTGTAATCTGTCTGGTCTTAAACTAATACTCCCTCCATTTCATAATGTATAAAAAAAAA]

[+] EMBL BM419171             [GCCCGGCGAGTTCGTCCCGACCGGTTCGTCCCGCCGGCGACCGGCCGCTGGCTGGAGCACGTGGTGTGGTCGAACGGGCCGGAGACGAGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGCGGAGATGTTCCGGCGGTACGACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACGGGCGGCTTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGACCTGTGATTTAGTACTGTAGTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTTTTCGCATGGAGTTCTTGATTTGCCGGGTGACCGGGGTGGGGTGAAAGTGTTTGAATTCAACTTTTGATTTTATGTAAAGTTTGATTAATTAATTTGTTACAAGGGGAAATGAATAATGTAGTGATATGATCCTACTGCTAGTCTGCTATGGTGGATATGTGAGTTGATTTGTAATCTGTCTGGTCTTAAACTAATACTCCCTCCATTTCATAATGTATAAAAAAAAA]


>consensus_13054#3 GCCCGGCGAGTTCGTCCCGACCGGTTCGTCCCGCCGGCGACCGGCCGCTGGCTGGAGCAC GTGGTGTGGTCGAACGGGCCGGAGACGAGGACGCCATCGGAGGGGAACAAGCAGTGCCCC GGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGCGGAGATGTTCCGGCGGTACG ACACGTTCGCCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGC TGACACGGGCGGCTTCGGGATAGCACGCACGTCGACGTCACGTGCGCGCCGACCTGTGAT TTAGTACTGTAGTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTTTTCGCATGGAGTT CTTGATTTGCCGGGTGACCGGGGTGGGGTGAAAGTGTTTGAATTCAACTTTTGATTTTAT GTAAAGTTTGATTAATTAATTTGTTACAAGGGGAAATGAATAATGTAGTGATATGATCCT ACTGCTAGTCTGCTATGGTGGATATGTGAGTTGATTTGTAATCTGTCTGGTCTTAAACTA ATACTCCCTCCATTTCATAATGTATAAAAAAAAA



consensusID : consensus_13054#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 444
fasta sequence
                              [CGGCCTCGATGTGTGCCGGAGATGTTCCCGGCGGTTTCGTACCCGTTCCCCGCCGTACCGTGGTGGAGGCGCCCGGTGGAGCCCGGTGGTGACCGTTCACCGTCGCTGACCCCGGGCGGCTTCGGGATAGCACCGCACCGTCGACGTCACCGTGCGCGCCGACCCTGTGATTTAGTACCTGTAGTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTTTTCGCCCTGGAGTTCTTGATTTCCCGGGTGACCCGGGGTGGGGTGAATAGTGTTTGAATTCCACCTTTTGACTCTCTTATGCTAAAGTTTGATTAATTAATTTGTTCCCAAGGGGAAATGAATAATGTAGTGATATGATCCTACTGCTAGTCTGCTATGGTGATATGTGAGTTGATTTGTAATCTGTCTGGTCTTAAACTAATACCNCCCCCCCCTTTCATAAAA]

[+] EMBL BM421460             [CGGCCTCGATGTGTGCCGGAGATGTTCCCGGCGGTTTCGTACCCGTTCCCCGCCGTACCGTGGTGGAGGCGCCCGGTGGAGCCCGGTGGTGACCGTTCACCGTCGCTGACCCCGGGCGGCTTCGGGATAGCACCGCACCGTCGACGTCACCGTGCGCGCCGACCCTGTGATTTAGTACCTGTAGTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTTTTCGCCCTGGAGTTCTTGATTTCCCGGGTGACCCGGGGTGGGGTGAATAGTGTTTGAATTCCACCTTTTGACTCTCTTATGCTAAAGTTTGATTAATTAATTTGTTCCCAAGGGGAAATGAATAATGTAGTGATATGATCCTACTGCTAGTCTGCTATGGTGATATGTGAGTTGATTTGTAATCTGTCTGGTCTTAAACTAATACCNCCCCCCCCTTTCATAAAA]


>consensus_13054#4 CGGCCTCGATGTGTGCCGGAGATGTTCCCGGCGGTTTCGTACCCGTTCCCCGCCGTACCG TGGTGGAGGCGCCCGGTGGAGCCCGGTGGTGACCGTTCACCGTCGCTGACCCCGGGCGGC TTCGGGATAGCACCGCACCGTCGACGTCACCGTGCGCGCCGACCCTGTGATTTAGTACCT GTAGTAGGTTGGTGGATGTTTTAATTGCGTGGTTAATTTTTCGCCCTGGAGTTCTTGATT TCCCGGGTGACCCGGGGTGGGGTGAATAGTGTTTGAATTCCACCTTTTGACTCTCTTATG CTAAAGTTTGATTAATTAATTTGTTCCCAAGGGGAAATGAATAATGTAGTGATATGATCC TACTGCTAGTCTGCTATGGTGATATGTGAGTTGATTTGTAATCTGTCTGGTCTTAAACTA ATACCNCCCCCCCCTTTCATAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13054#0      ACGATCCGACACCTGCACGCTAGTACGTAGTGCGTATACGTAGCCAGTACCCTACTC-CC 59
consensus_13054#1      CCAACCCAACACA-ACACTTGCACTTGCACTACGTACTCTCATTTCATCCGCTCCCGGCC 59
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      GTCCATGGCGCCGCCGCGAGCCAACTCCGGCGACGGTAACGACGGCGCCGTCGGAGGGCA 119
consensus_13054#1      GGCAATGGCGCCACCGCCAGTGAACTCCGGCGACGCCGCCGCCGCCGCCACGGGAGAGAA 119
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      GAGCAAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTACGGCGTGCC 179
consensus_13054#1      GAGCAAGCTCTCGCCGTCGGGCCTCCCCATACGCGAGATACCCGGCGGCTACGGCGTGCC 179
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CTTCCTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCCGACGAGTT 239
consensus_13054#1      CTTCTTCTCGCCGCTGCGCGACCGCCTCGACTACTTCTACTTCCAGGGCGCCGAGGAGTA 239
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CTTCCGCTCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCC 299
consensus_13054#1      CTTCCGATCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCC 299
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CGGCCCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCG 359
consensus_13054#1      CGGCCCCTTCATCTCCGGCAACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCG 359
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTTCATGCC 419
consensus_13054#1      CGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTACATGCC 419
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      GTCGCTCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCTCG 479
consensus_13054#1      GTCGCGCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCGCG 479
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCGGCGAGGATGCACCACGTCGC 539
consensus_13054#1      CCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCCGCGCGGATGCACCACGTCGC 539
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      GCCGGCGTTCCGCGCCGCCTTCGCCGCCATGTTCGACGAGGTCGACGCCGGCCTCGTCGC 599
consensus_13054#1      GCCGGCGTTCCGCGCCGCCTTTGCCGCCATGTTCGACGCCGTCGAGGCCGGCCTCGGCGC 599
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CGGCGGCCCCGTCGAGTTCAACAAGCTCAACATGCGGTACATGCTCGACTTCACCTGCGC 659
consensus_13054#1      CG------CCGTCGAGTTCAACAAGCTCAACATGAGGTACATGCTCGACTTCACCTGCGC 653
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CGCGCTGTTCGGCGGCGCGCCGCCGAGCAAGGCCATGGGCGACGCTGCCGTGACGAAGGC 719
consensus_13054#1      CGCGCTGTTCGGCGGCGAGCCGCCGAGCAAGGTGGTCGGCGACGGCGCCGTGACGAAGGC 713
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      GGTGAAGTGGCTCATCTTCCAGCTTCACCCGCTCGCCAGCAAGGTCGTCAAGCCGTGGCC 779
consensus_13054#1      CATGGCGTGGCTCGCGTTCCAGCTGCACCCGATCGCGAGCAAGGTCGTCAAGCCATGGCC 773
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      GCTGGAGGACCTCCTCCTCCACACCTTCCGCCTGCCGCCGTTCCTGGTGCGCCGCGAGTA 839
consensus_13054#1      GCTCGAGGAGCTACTCCTGCACACCTTCTCCCTGCCGCCGTTCCTGGTGCGGCGTGGCTA 833
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CGGCGAGATCACGGCGTACTTCGCCGCCGCCGCCGCGGCCATCCTCGACGACGCCGAGAA 899
consensus_13054#1      CGCCGACCTGAAGGCGTACTTCGCCGACGCCGCCGCGGCCGTCCTCGACGACGCCGAGAA 893
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      GAACCACCCGGGAATCCCGCGCGACGAGCTCCTCCACAACCTCGTGTTCGTCGCCGTCTT 959
consensus_13054#1      GAGCCACACGGGAATCCCGCGCGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTT 953
consensus_13054#2      ---------------------CGACGAGCTCCTCGACAACCTTGTGTTCGTCGCCATTTT 39
consensus_13054#3      --GCCCGGCGAGTTCGTCCCGACCGGTTCGTCCCGCCGGCGACCGGCCGCTGGCTGGAGC 58
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CAACGCCTACGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGC 1019
consensus_13054#1      CAACGCCTTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGC 1013
consensus_13054#2      CAACGCCTTCGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGC 99
consensus_13054#3      ACGTGGTGTGGTCGAACGGGCCGGAGACGAGGACGCCATCGGAGGGGAACAAGCAGTGCC 118
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      CGGCCCGGAGCTCCACGCCAAGCTAGCCTCCGAGGTCCGCGCCGCCGCGCCCGCCGGCGG 1079
consensus_13054#1      CGGCCCGGAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGA 1073
consensus_13054#2      CGGCCCGGAGCTCCACGCCAAGCTTGCCACCGAGGTCCGCGCCACCGTGCCCACCGGCGA 159
consensus_13054#3      CCGGGAAGGACATGGTGGTGGCGGTGGGGCGGCTGA-TGGTGCGGAGATGTTCC-GGCGG 176
consensus_13054#4      ------------------------CGGCCTCGATG--TGTGCCGGAGATGTTCCCGGCGG 34
                                                *     *  *   *   *   *      * **** 

consensus_13054#0      CGGCGAGATCACCATCTCCGCCGTGGAGAAGGAGATGCCGCTGGTGAAGTC-GGTGGTGT 1138
consensus_13054#1      GGACGACGGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTC-GGTGGTGT 1132
consensus_13054#2      GGACGACGGCATCACCCTCGCCGCCGTCGAGCGGATGCCGCTGGTGAAGTC-GGTGGTGT 218
consensus_13054#3      TACGACAC--GT--TCGCCGCCGA--CGTGGTGGAGGCGCC-GGTGGAGCC-GGTGGTG- 227
consensus_13054#4      TTTCGTACCCGT--TCCCCGCCGTACCGTGGTGGAGGCGCCCGGTGGAGCCCGGTGGTG- 91
                                      *  *****       *  ** **  * **** ** * ******* 

consensus_13054#0      GGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGGCGCGCGCGGCGCGACA 1198
consensus_13054#1      GGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACA 1192
consensus_13054#2      GGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGCCACGCGCGGCGCGACA 278
consensus_13054#3      AC-GTTCAC-GTCGCTGACAC-G--GGCGG--CTTCGGGATAGCAC-GCAC-GT-CGACG 277
consensus_13054#4      ACCGTTCACCGTCGCTGACCCCG--GGCGG--CTTCGGGATAGCACCGCACCGT-CGACG 146
                             * * *    ***  * *  ** **   * * * *  *    ** * *  **** 

consensus_13054#0      TGGTCGTCGAGAGCCACGACGCGGCGTACGAGGTCCGCAAGGGGGAGCTGCTGTTCGGGT 1258
consensus_13054#1      TGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCT 1252
consensus_13054#2      TGGTGGTCGAGAGCCACGACGCGGCGTACGAGGTGCGCAAGGGGGAGATGCTGTTCGGCT 338
consensus_13054#3      TCAC-GTGCGCGCCGACC-TGTGATTTAGTAC-TGTAGTAGGTTG-GTGGATGTTTTAAT 333
consensus_13054#4      TCACCGTGCGCGCCGACCCTGTGATTTAGTACCTGTAGTAGGTTG-GTGGATGTTTTAAT 205
                       *    **      * **   * *   **  *  *     ***  * *  * ****    *

consensus_13054#0      ACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCCCCG 1318
consensus_13054#1      ACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCG 1312
consensus_13054#2      ACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCGCCG 398
consensus_13054#3      TGC-GTGGTTAATTTTTCGCA-TGG---AGTTCTTGATTTGCCGGGTGA-CC-GGGGTGG 386
consensus_13054#4      TGC-GTGGTTAATTTTTCGCCCTGG---AGTTCTTGATTTCCCGGGTGA-CCCGGGGTGG 260
                         * *  * *       ***   *     **  * **     * ** **    *     *

consensus_13054#0      ACCGGTTCGTCTCCGGCGCCGGAAGCGCCGCCCGGCCGCTGCTGGAGCACGTGGTGTGGT 1378
consensus_13054#1      ACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGT 1372
consensus_13054#2      ACCGGTTCGTCGCCGGCGGCGCCGCCGGCGACCGGCCGCTGCTGGAGCACGTGGTGTGGT 458
consensus_13054#3      GGTGAA-AGTGTTTGA-ATTCAAC-TTTTGATT---TTATG-TAAAGT--TTGATTAATT 437
consensus_13054#4      GGTGAATAGTGTTTGA-ATTCCACCTTTTGACTCTCTTATGCTAAAGT--TTGATTAATT 317
                          *    **    *              *         ** *  **    ** *    *

consensus_13054#0      CGAACGGGCCGGAGACCGGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACA 1438
consensus_13054#1      CGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACA 1432
consensus_13054#2      CGAACGGGCCGGAGACGAGGGCGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACA 518
consensus_13054#3      AATTTGTTAC-AAGGGGAAATGAATAATGTAGTGATATGATCC-TACTGCTAGTCTGCTA 495
consensus_13054#4      AATTTGTTCCCAAGGGGAAATGAATAATGTAGTGATATGATCC-TACTGCTAGTCTGCTA 376
                            *   *  **           *  * ** *  *  * *  * *  *  *   *  *

consensus_13054#0      TGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGGGCTGTTCCGGCGGTACGACACGTTCG 1498
consensus_13054#1      TGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCG 1492
consensus_13054#2      TGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGAGCTGTTCCGGCGGTACGACACGTTCG 578
consensus_13054#3      TGGTGGATATG-TGAGTTGATTT---GTAATCTGTCTGGTCTTAAACTAATAC-TCCCTC 550
consensus_13054#4      TGGTG-ATATG-TGAGTTGATTT---GTAATCTGTCTGGTCTTAAACTAATAC-CNCCCC 430
                       *****     * ** *  *  *    **       *** **      **  **       

consensus_13054#0      CCGCCGACGTGGAGGAGCTGCCGCTTGAGCCGGTGGTCACGTTCACGTCGCTGACCCGCG 1558
consensus_13054#1      CCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACG-G 1551
consensus_13054#2      CCGCCGACGTGGTGGAGGCGCCGGTGGAGCCGGTGGTGACGTTCACGTCGCTGACACG-G 637
consensus_13054#3      CA--TTTCATAATGTATAAAAAAAAA---------------------------------- 574
consensus_13054#4      CCCCTTTCATAAAA---------------------------------------------- 444
                       *      * *                                                  

consensus_13054#0      CCGCCGACGGCGACGGCGCCGCGCGGCGCGGAGTATAATAGTGTCAAGCGGCGGCGCGCG 1618
consensus_13054#1      GCGTCGTCGG-GATAGCAC-GCACGTCG----ACGTCAC-GTG-CGCGCCGTGCTGTGAT 1603
consensus_13054#2      GCGTCGTCGG-GATAGCAC-GCACGTCG----ACGTCAC-GTG-CGCGCCGTGCTGTGAT 689
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      TGAGCGGCGAGTGTTGGTGCGGCGACGACGCTGTCCATGCATGGTCGCTGTCAGTTGGTC 1678
consensus_13054#1      TTAGTACT--GTACTAGGTTGGTG--GATGTTTTAATTGCGTGGT---TAATTATTAATC 1656
consensus_13054#2      TTAGTACT--GTACTAGGTTGGTG--GATGTTTTAATTGCGTGGT---TAATTATTAATC 742
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      AGATTTGCATGGATTTCTTTTTTCTTT--GACCTAAAAAAATTGGGAAAAAGGTGTACTT 1736
consensus_13054#1      ACGCATAAAGTATTAATCATGTTTTAT--CATCTAACAACAATGAAAA------------ 1702
consensus_13054#2      GCGCATAAAGTATTAATCATGTTTTATCAAACCTTAAAAGA------------------- 783
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      TCGCGTGCTTGTGGGGGCAGGTTCTTAAGTATAGGGATTCGGTTTGTCATTGTGTGAAGT 1796
consensus_13054#1      ------------------------------------------------------------
consensus_13054#2      ------------------------------------------------------------
consensus_13054#3      ------------------------------------------------------------
consensus_13054#4      ------------------------------------------------------------
                                                                                   

consensus_13054#0      TCAATACGATGTTTGAAGTTGAATAAAATTATGTGCGTTCCTCGTGGTTTTTCTAAAAA 1855
consensus_13054#1      -----------------------------------------------------------
consensus_13054#2      -----------------------------------------------------------
consensus_13054#3      -----------------------------------------------------------
consensus_13054#4      -----------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)