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Oryza sativa
cluster # 13055 cluster # 13055       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13055#0 length = 1759 sequences # 11  
consensus_13055#1 length = 480 sequences # 1  

consensusID : consensus_13055#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1759
fasta sequence
                              [TTGGCGTGAGGGGAAGGGAGAGAGCGGGAGGGGGGATTTTTATTTAGGATTTTCTTTTATCTGTATTTTTTTTTATTAAGAGAAAGCCTTCCCGACTCCGTCTCCTCCTCCCCTCGTCGTCGTCGTCGTCGTCGTCTCGCCTTCGCCGCCGAGGCGGAACAATTCCGCGGGGAGTTCGCTGATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCTTGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTGTAGACCAAGGACATATGAGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAAATCCATCTCTGCATGATGAGAGAGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTCTTCCACGACTTGTGCGTCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAAGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCATGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATATGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGTGAAATTCTTGTTGATATCCCTATAAATGTAGTGCACCAAGGGCGTCATGAGTCATCAGTTCGTCGCTTGACTTGTGAGTA]

[+] EMBL AK071670             [TTGGCGTGAGGGGAAGGGAGAGAGCGGGAGGGGGGATTTTTATTTAGGATTTTCTTTTATCTGTATTTTTTTTTATTAAGAGAAAGCCTTCCCGACTCCGTCTCCTCCTCCCCTCGTCGTCGTCGTCGTCGTCGTCTCGCCTTCGCCGCCGAGGCGGAACAATTCCGCGGGGAGTTCGCTGATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCTTGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTGTAGACCAAGGACATATGAGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAAATCCATCTCTGCATGATGAGAGAGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTCTTCCACGACTTGTGCGTCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAAGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCATGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATATGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGTGAAATTCTTGTTGATATCCCTATAAATGTAGTGCACCAAGGGCGTCATGAGTCATCAGTTCGTCGCTTGACTTGTGAGTA]
[+] EMBL CB667907             [                                                                                                     CTCCTCCTCCCCTCGTCGTCGTCGTCGTCGTCGTCTCGCCTTCGCCGCCGAGGCGGAACAATTCCGCGGGGAGTTCGCTGATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCTTGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB617932             [                                                                                                                       TCGTCGTCGTCGTCGTCTCGCCTTCGCCGCCGAGGCGGAACAATTCCGCGGGGAGTTCGCTGATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCTTGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCTGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTCCCTATAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCATGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTTGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTGTAGACCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB659060             [                                                                                                                                           CCTCCCTCGCCGAGGCGGAACAATTCCGCGGGGAGTTCGCTGATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCTTGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTGTAGACCAAGGACATATGAGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB684092             [                                                                                                                                                      GAGGCGGACCTATTCCGCGGGGAGTTCGCTGATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCTTGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTGTAGACCAAGGACATATGAGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSS2732A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTNAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB617933             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGTGGTGGTTCGCAGCTACACGTGGGTCATTCTGACCAGGGTGCTTCAAATCCATCTCTGCATGATGAGAGAGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTCTTCCACGACTTGTGCGTCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACAC  TGAAGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCATGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGGCATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATATGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGTGAAATTCTTGTTGATATCCCTATAAATGTAGTGCACCAAGGGCG                                    ]
[-] EMBL CB659061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGAGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTCTTCCACGACTTGTGCGTCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAAGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCATGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATATGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGTGAAATTCTTGTTGATATCCCTAGAAATGTAGTGCACCAAGGGCGT                                   ]
[-] EMBL CB667908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTCTTCCACGACTTGTGCGTCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAAGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCATGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATATGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGTGAAATTCTTGTTGATATCCCTATGAATGTAGTGCACCAAGGGCGTCATGAGTCATCAataaaaaga              ]
[-] EMBL CB684093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GACATCTGAAAATCAATTTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTTTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTATAAAGATTTTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTTTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATTTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATTTGCTGTTCCTGCAGCTAGTGCTTGCTTTCCTTCAGACGCAAATAATCAAAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTTTTCCCCGACTTGTGCGTCAGGATTTGGCTTTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAAGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCCCCTGAGATCCAGCGATGCTTCATGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTCCCTTGTGTAATATATATGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGTGAAATTCTTGTTGA                                                                  ]
[+] EMBL BE228629             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAGGCTTCTTCCACGACTTGTGCGTCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACNCTGTGAAGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCNGCGATGCTTCATGATCTTTGGTANGTCTGTGTGCTTCANGAAGTTCGCTGAAGCATNTGCATCCAGATCGCGGGACATAANACTTGTGCTTGCCGATGAACCTTTACATTTTTTTACCTTGTGTNATATANATGCAANGTTGTTATGAAATCNTAATCGCTGTAAATTGCNACATNNANAATGTCNGTTGTGAAATTCTTGTNGAa                                                                 ]


>consensus_13055#0 TTGGCGTGAGGGGAAGGGAGAGAGCGGGAGGGGGGATTTTTATTTAGGATTTTCTTTTAT CTGTATTTTTTTTTATTAAGAGAAAGCCTTCCCGACTCCGTCTCCTCCTCCCCTCGTCGT CGTCGTCGTCGTCGTCTCGCCTTCGCCGCCGAGGCGGAACAATTCCGCGGGGAGTTCGCT GATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCT TGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGA TGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCG ACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGA GTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGT GTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGG CTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACC ATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGC GCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAA GAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAA GGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATG AACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTGTAGACCAAG GACATATGAGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAAATC CATCTCTGCATGATGAGAGAGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCA ATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCC TACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGG AAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGG TCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATA CTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAA GGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTCTTCCACGACTTGTGCGT CAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAA GACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCAT GATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCG GGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATA TGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGTG AAATTCTTGTTGATATCCCTATAAATGTAGTGCACCAAGGGCGTCATGAGTCATCAGTTC GTCGCTTGACTTGTGAGTA



consensusID : consensus_13055#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 480
fasta sequence
                              [GATGAAGAAAGATGTTTTTCTCGGAGTAACACTATATCAGGTCTTGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTCAGCTAGTGCTTGCTCTCCTTCAGACCAATAATCAAGGACGGTATCCCCCACCATGCTGCTGTTTGTAAATGGAAACTTCTTCCCGACTTGTGCGTCAGATCTGCTCCAATGACCCACTCATGTCTGAAGAATTGGATACCTGAAGACGGTCCAGAGAGACCCGTTGTCGACCCACCTGAGACCACGATGCTCATGATCTTTGTAGTCTGTGTGCTCAGAAGTTCCTGACATTGCACGTCCGGACATAAGACTGGCTCGAGACTTCATTTTCTGTGTAATATATACCAAGTGTTATGAAATCAATCGCGTAATGCAACATAAGAATGTCGTGTAA]

[+] EMBL BI800116             [GATGAAGAAAGATGTTTTTCTCGGAGTAACACTATATCAGGTCTTGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTCAGCTAGTGCTTGCTCTCCTTCAGACCAATAATCAAGGACGGTATCCCCCACCATGCTGCTGTTTGTAAATGGAAACTTCTTCCCGACTTGTGCGTCAGATCTGCTCCAATGACCCACTCATGTCTGAAGAATTGGATACCTGAAGACGGTCCAGAGAGACCCGTTGTCGACCCACCTGAGACCACGATGCTCATGATCTTTGTAGTCTGTGTGCTCAGAAGTTCCTGACATTGCACGTCCGGACATAAGACTGGCTCGAGACTTCATTTTCTGTGTAATATATACCAAGTGTTATGAAATCAATCGCGTAATGCAACATAAGAATGTCGTGTAA]


>consensus_13055#1 GATGAAGAAAGATGTTTTTCTCGGAGTAACACTATATCAGGTCTTGCACTGAAGTAAGGA GGGAGGTCAACGCTGGGATTGCTCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGA CGATACTGGACCATCTGCTGTTCCTCAGCTAGTGCTTGCTCTCCTTCAGACCAATAATCA AGGACGGTATCCCCCACCATGCTGCTGTTTGTAAATGGAAACTTCTTCCCGACTTGTGCG TCAGATCTGCTCCAATGACCCACTCATGTCTGAAGAATTGGATACCTGAAGACGGTCCAG AGAGACCCGTTGTCGACCCACCTGAGACCACGATGCTCATGATCTTTGTAGTCTGTGTGC TCAGAAGTTCCTGACATTGCACGTCCGGACATAAGACTGGCTCGAGACTTCATTTTCTGT GTAATATATACCAAGTGTTATGAAATCAATCGCGTAATGCAACATAAGAATGTCGTGTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13055#0      TTGGCGTGAGGGGAAGGGAGAGAGCGGGAGGGGGGATTTTTATTTAGGATTTTCTTTTAT 60
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      CTGTATTTTTTTTTATTAAGAGAAAGCCTTCCCGACTCCGTCTCCTCCTCCCCTCGTCGT 120
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      CGTCGTCGTCGTCGTCTCGCCTTCGCCGCCGAGGCGGAACAATTCCGCGGGGAGTTCGCT 180
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      GATTAATCCGGCCGAATCCTGAAATTCCCCTTGAGCAATCGGGATAAGGCGTAGGAATCT 240
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      TGCGCGGGAAGGGCTAATCGAATCGGTTGGGCTGTACGGAGATGGATGAGAAGGTGAAGA 300
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      TGGAGAGCAAGCTGTCCTCCGCGGCGGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCG 360
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      ACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGA 420
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      GTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGT 480
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      GTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGG 540
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      CTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACC 600
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      ATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGC 660
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      GCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAA 720
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      GAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAA 780
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      GGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATG 840
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      AACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTGTAGACCAAG 900
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      GACATATGAGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAAATC 960
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      CATCTCTGCATGATGAGAGAGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCA 1020
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      ATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCC 1080
consensus_13055#1      ------------------------------------------------------------
                                                                                   

consensus_13055#0      TACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGG 1140
consensus_13055#1      ---------------------------------------------------GATGAA--G 7
                                                                          **** *  *

consensus_13055#0      AAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGG 1200
consensus_13055#1      AAAGATGTTTTTCTCGGAGTAACACTATATCAGGTCTTG-CACTGAAGTAAGGAGGGAGG 66
                       ******* ******************************* ********************

consensus_13055#0      TCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATA 1260
consensus_13055#1      TCAACGCTGGGATTGCT-CGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATA 125
                       ***************** ******************************************

consensus_13055#0      CTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAA 1320
consensus_13055#1      CTGGACCATCTGCTGTTCCT-CAGCTAGTGCTTGCTCTCCTTCAGACC--AATAATCAA- 181
                       ******************** **************************   ********* 

consensus_13055#0      GGACGGTATCCCCCAACCATGCTGCTGTT-GTAAATGAAACTTCTTCCACGACTTGTGCG 1379
consensus_13055#1      GGACGGTATCCCCCA-CCATGCTGCTGTTTGTAAATGGAAACTTCTTCCCGACTTGTGCG 240
                       *************** ************* ******* **  *  * * ***********

consensus_13055#0      TCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGA 1439
consensus_13055#1      TCAG-ATCTG--CTCCAATGA-CCCACTC-ATGTC---TGAAGAATTGGATAC---CTGA 289
                       **** *****     ****** ******* ****    ***************    ***

consensus_13055#0      AGACAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCA 1499
consensus_13055#1      AGAC-GGTCCAGAGAGACCCGTTGTC------GACCCACCTGAGACC--ACGATGCT-CA 339
                       **** ************  **  **       ** ********** *   ******* **

consensus_13055#0      TGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGC 1559
consensus_13055#1      TGATCTTTGT--AGTCTGTGTGCTC--AGAAGTTC-CTGACAT-TGCACGTCC------- 386
                       *********    ***********    ******* ****    *   * ***       

consensus_13055#0      GGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATAT 1619
consensus_13055#1      -GGACATAAGACTGGCTC--------GAGACTT--CATTTTC------TGTGTAATATAT 429
                        ************ *  *        **  ***  ******       ************

consensus_13055#0      ATGCAAGGTTGTTATGAAATCATAATCGCTGTAAATTGCAACATAAAGAATGTCGGTTGT 1679
consensus_13055#1      AC-CAAG--TGTTATGAAATC--AATCGC-GTAA--TGCAACATAA-GAATGTCG--TGT 478
                       *  ****  ************  ****** ****  ********** ********  ***

consensus_13055#0      GAAATTCTTGTTGATATCCCTATAAATGTAGTGCACCAAGGGCGTCATGAGTCATCAGTT 1739
consensus_13055#1      AA---------------------------------------------------------- 480
                        *                                                          

consensus_13055#0      CGTCGCTTGACTTGTGAGTA 1759
consensus_13055#1      --------------------
                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)