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Oryza sativa
cluster # 13063 cluster # 13063       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13063#0 length = 1220 sequences # 9  
consensus_13063#1 length = 546 sequences # 1  
consensus_13063#2 length = 300 sequences # 1  
consensus_13063#3 length = 236 sequences # 1  

consensusID : consensus_13063#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1220
fasta sequence
                              [TCCCCCTCCCCTCTCCACTCCAACTTGAGCTCTAGCTCTCGCACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTC-AAGAATTAGAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACACTCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGGCCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGTTACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGTGATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGACCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATAAAAACACCAGTTTTCAGAGGCTCAGAGTTTTTCAAATGGAATAGTTTCTTCTTTTTCCAATGAATTCTAGTTATACGTTCGTCGAGATATTTGTACACTATGGCAAAGGCACTAAAAAAGAGGTTTCTAGAGAGAATTATATGCTATATATGATTTCCTTTAGAAGATTGAAAATAGAGATCAACACTGTATTTTGTCCATGTAGAGTTTTTGCGAATAATAAAGCAAACGCATAT-CA----AAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK103408             [TCCCCCTCCCCTCTCCACTCCAACTTGAGCTCTAGCTCTCGCACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTC AAGAATTAGAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACACTCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGGCCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGTTACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGTGATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGACCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATAAAAACA                                                                                                                                                                                                                                                                  ]
[+] EMBL CF311331             [                        TTGAGCTCTAGCTCTCGCACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTC AAGAATTAGAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK059963             [                                          ACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTC AAGAATTAGAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACACTCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGGCCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGTTACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGTGATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGACCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATAAAAACACCAGTT                                                                                                                                                                                                                                                            ]
[+] EMBL CB681323             [                                                AAGCACCGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTC AAGAATTAGAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACACTCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGGCCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGTTACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGTGATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGT                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB681258             [                                                AAGCCCCGTAAAGCGAGGCGGAAGGAAGCTATCGCCTATCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAAATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAGGTGCGGCGAGTCCTTCCAGCGCGAGGACCTCCTCATCAACAAGGACAAGAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACTAGGTGGGAATGAAACGCATAAAGAAGTACGTCTAGATGATGAAAGCTGATAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTCTCAGAATTATAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCGAGGAACATGTTCTCGTTCCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB681259             [                                                                                                                                                                                                                                                                                                                                                                                                                                    tGTTCTTCAACAGACCCTCACTCCATTTGCAAGGTCATTTCTTC AAGAATTAGAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACACTCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGGCCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGTTACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGTGATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGACCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATAAAAACACCAGTTTTCAGAGGCTCAGAGTTTTTCAAATGGAATAGTTTCTTCTTTTTCCAATGAATTCTAGTTATACGTTCGTCGAGATATTTGTACACTATGGCAAAGGCACTAAAAAAGAGGTTTCTAGAGAGAATTATATGCTATATATGATTTCCTTTAGAAGATTGAAAATAGAGATCAACACTGTATTTTGTCCATGTAGAGTTTTTGCGAATAATAAAGCAAACGCATAT CA    AAAAAga              ]
[-] EMBL CB681324             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATTTCTTC AAGAATTAGAGCCAAAGATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACACTCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGGCCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGTTACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGTGATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGACCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATAAAAACACCAGTTTTCAGAGGCTCAGAGTTTTTCAAATGGAATAGTTTCTTCTTTTTCCAATGAATTCTAGTTATACGTTCGTCGAGATATTTGTACACTATGGCAAAGGCACTAAAAAAGAGGTTTCTAGAGAGAATTATATGCTATATATGATTTCCTTTAGAAGATTGAAAATAGAGATCAACACTGTATTTTGTCCATGTAGAGTTTTTGCGAATAATAAAGCAAACGCATAT CA    AAAAAAga             ]
[+] EMBL AA752205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGAATTGCTTATAAATATCAAGGAACATGTTCTCGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACACTCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGGCCTCAGACGAGGAACGGTTGTGTTGATCATCAGGtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF311332             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGTGATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTTTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGCCCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAACCAGTACAGAATAAAAACACCGGTTTTCAGAGGCTCAGAGTTTTTCAAATGGAATAGTTTCTTCTTTTTCCAATGAATTCTAGTTATACGTTCGTCGAGATATTTGTACACTATGGCAAAGGCACTAAAAAAGAGGTTTTTAGAGAGAATTATATGCTATATATGATTTCCTTTAGAAGATTGAAAATAGAGATCAACCCTGTATTTTGTCCATGTACAGTTTTTGCGAATAATAAAGCAAACGCATATACATCTCAAAAAAAAAAAAAAAAAAAAA]


>consensus_13063#0 TCCCCCTCCCCTCTCCACTCCAACTTGAGCTCTAGCTCTCGCACTCGCAAGCAAGGGAAA GCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGG GCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCA GATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGA CTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAA GAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAAT GAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATT GGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTCAAGAATTAGAGCCAAA GATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCT CGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACAC TCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGG CCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGT TACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGT GATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAA GCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGA CCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAAT AAAAACACCAGTTTTCAGAGGCTCAGAGTTTTTCAAATGGAATAGTTTCTTCTTTTTCCA ATGAATTCTAGTTATACGTTCGTCGAGATATTTGTACACTATGGCAAAGGCACTAAAAAA GAGGTTTCTAGAGAGAATTATATGCTATATATGATTTCCTTTAGAAGATTGAAAATAGAG ATCAACACTGTATTTTGTCCATGTAGAGTTTTTGCGAATAATAAAGCAAACGCATATCAA AAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13063#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 546
fasta sequence
                              [GCTCTAGCTCTCGCACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGGATGAAAGAGTGACACTTCGTGTTGCCAAAGTTGAACTGTCACCTGTATATATAGCTCAGTGACAGAGTCTCTGTCTCTCTGAACTCAAACCATAGAAGACTGCAGAACTTCATGTGGCGATACTGCGGAGTGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCAC]

[+] EMBL CB639438             [GCTCTAGCTCTCGCACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGGATGAAAGAGTGACACTTCGTGTTGCCAAAGTTGAACTGTCACCTGTATATATAGCTCAGTGACAGAGTCTCTGTCTCTCTGAACTCAAACCATAGAAGACTGCAGAACTTCATGTGGCGATACTGCGGAGTGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAACCTCAC]


>consensus_13063#1 GCTCTAGCTCTCGCACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGCTATCGCCTAGC AGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGGTGATGGTGGGG CGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAGGGTACCTGGTG GTGGAGCACGAGCTCGCCATGGGCCGCCGCGACTTCCTCCGCAAGTACGGCGAGTCCTTC CACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCCGACCAGGATGAA AGAGTGACACTTCGTGTTGCCAAAGTTGAACTGTCACCTGTATATATAGCTCAGTGACAG AGTCTCTGTCTCTCTGAACTCAAACCATAGAAGACTGCAGAACTTCATGTGGCGATACTG CGGAGTGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAATGAAACACATAAAGAA GTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGGTTCTTCAACAGAA CCTCAC



consensusID : consensus_13063#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 300
fasta sequence
                              [GACGTTCTCAGCTTTCATCATCTCGACGTACTTCTGTCGAAAAGGAATAGCGAAGTAGCAACCACTCCGCAGTATCGCCACATGAAGTTCTGCAGTCTTCTATGGTTTGAGTTCAGAGAGACAGAGACTCTGTCACTGAGCTATATATACAGGTGACAGTTCAACTTTGGCAACACGAAGTGTCACTCTTTCATCCTACTGGTCGGAGGGATCGTTCTTCTTGTACTTGTTGATGAGGAGATCCTCGCGGTGGAAGGACTCGCCGTACTTGCGGAGGAAGTCGCGGCGGCCCATGGCGAG]

[+] EMBL BE040364             [GACGTTCTCAGCTTTCATCATCTCGACGTACTTCTGTCGAAAAGGAATAGCGAAGTAGCAACCACTCCGCAGTATCGCCACATGAAGTTCTGCAGTCTTCTATGGTTTGAGTTCAGAGAGACAGAGACTCTGTCACTGAGCTATATATACAGGTGACAGTTCAACTTTGGCAACACGAAGTGTCACTCTTTCATCCTACTGGTCGGAGGGATCGTTCTTCTTGTACTTGTTGATGAGGAGATCCTCGCGGTGGAAGGACTCGCCGTACTTGCGGAGGAAGTCGCGGCGGCCCATGGCGAG]


>consensus_13063#2 GACGTTCTCAGCTTTCATCATCTCGACGTACTTCTGTCGAAAAGGAATAGCGAAGTAGCA ACCACTCCGCAGTATCGCCACATGAAGTTCTGCAGTCTTCTATGGTTTGAGTTCAGAGAG ACAGAGACTCTGTCACTGAGCTATATATACAGGTGACAGTTCAACTTTGGCAACACGAAG TGTCACTCTTTCATCCTACTGGTCGGAGGGATCGTTCTTCTTGTACTTGTTGATGAGGAG ATCCTCGCGGTGGAAGGACTCGCCGTACTTGCGGAGGAAGTCGCGGCGGCCCATGGCGAG



consensusID : consensus_13063#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence
                              [ATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGACCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATAAAAACCCCAGTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNACTCGA]

[-] EMBL BE040475             [ATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGACCATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATAAAAACCCCAGTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNACTCGA]


>consensus_13063#3 ATTTTTGCAGGTATACATACATGACCATATGCTTGGAGAAATCATATTTCTAAGGAGAAG CCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATGGAC CATACATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACAGTACAGAATA AAAACCCCAGTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNACTCGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13063#0      TCCCCCTCCCCTCTCCACTCCAACTTGAGCTCTAGCTCTCGCACTCGCAAGCAAGGGAAA 60
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GCGAGGCGGAAGGAAGCTATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGG 120
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GCTCGTGACGGAGGAGGTGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCA 180
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GATGCTGCGGGACAGAGGGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCCGCCGCGA 240
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      CTTCCTCCGCAAGTACGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAA 300
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GAAGAACGATCCCTCCGACCAGATATACGTTTTCTTCCCTAACGATGACAAGGTGGGAAT 360
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GAAACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATT 420
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GGTTCTTCAACAGAACCTCACTCCATTTGCAAGGTCATTTCTTCAAGAATTAGAGCCAAA 480
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GATCCACTTGGAAATTTTCCAGGAAGCCGAATTGCTTATAAATATCAAGGAACATGTTCT 540
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      CGTTCCTGAACATCAAGTGCTTAACAATGAGGAAAAGAAGACATTATTGGAGCGGTACAC 600
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      ------------------------------------------------------------
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      TCTAAAGGAAACTCAGCTTCCAAGAATACAAATTACGGACCCTATTGCAAGGTACTATGG 660
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      -----------GCTCTAGCTCTCGCACTCGCAAGCAAGGGAAAGCGAGGCGGAAGGAAGC 49
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      CCTCAGACGAGGACAGGTTGTGAAGATCATCAGGCCCAGCGAGACAGCCGGCAGATATGT 720
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      TATCGCCTAGCAGCGGAGACCGGGAGATCGAGATGTCGGCGGGGCTCGTGACGGAGGAGG 109
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      TACATATCGTTATGTTGTATAATAGCAGAAAAATGAGATGGAGAGCACCATAAATCTGGT 780
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      TGATGGTGGGGCGGCTGGTGCGGATCCGGCGGACGGTGATGCAGATGCTGCGGGACAGAG 169
consensus_13063#2      ------------------------------------------------------------
                                                                                   

consensus_13063#0      GATTTTTGCAGGTATA-CATACA-TGACCATATGCTTGGAGAAATCATATTTCTAAGGAG 838
consensus_13063#3      -ATTTTTGCAGGTATA-CATACA-TGACCATATGCTTGGAGAAATCATATTTCTAAGGAG 57
consensus_13063#1      GGTACCTGGTGGTGGAGCACGAGCTCGCCATGGGCC-GCCGCGACTTCCTCCGCAAGTAC 228
consensus_13063#2      ------------------------------------------------------GACGTT 6
                                                                              *    

consensus_13063#0      AAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATG 898
consensus_13063#3      AAGCCATGTTAATGATCCCATGGCTGTTATGTAAGTGAATTCTCGTGAGTTAAGCATATG 117
consensus_13063#1      GGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTACAAGAAGAACGATCCCTCC 288
consensus_13063#2      CTCAGCTTTCATCATCTCGACGTACTTCT-GTCGAAAAGGAATAGCGAAGTAG--CAACC 63
                             *          * * *         *     *      *               

consensus_13063#0      GACCATAC-------ATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACA 951
consensus_13063#3      GACCATAC-------ATAATTCCTCATGTTGTACACTTTGTTTCAAGAACTGTATAAACA 170
consensus_13063#1      GACCAGGATGAAAGAGTGACACTTCGTGTTGCCAAAGTTGAACTGTCACCTGTATATATA 348
consensus_13063#2      ACTCCGCA-------GTATCGCCACATG------AAGTTCTGCAGTCTTCTATGGTTTGA 110
                          *            *    *  * **      *  **          ** *      *

consensus_13063#0      GTACAG-AATAAAAACACCAGTTTTCAGAGGCTCAGAGTTTTTCAAATGGAATAGTTTCT 1010
consensus_13063#3      GTACAG-AATAAAAACCCCAGTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN 229
consensus_13063#1      GCTCAGTGACAGAGTCTCTGTCTCTCTGAACTCAAACCATAGAAGACTGCAGAACTTCAT 408
consensus_13063#2      GTTCAGAGAGACAGAGACTCTGTCACTGAGCTATATATACAGGTGACAGTTCAACTT--- 167
                       *  ***  * * *    *    *  *  *     *          *       *      

consensus_13063#0      TCTTTTTCCAATGAATTCTAGTTATACGT-TCGTCGAGATATTTGTACACTATGGCAAAG 1069
consensus_13063#3      NACTCGA----------------------------------------------------- 236
consensus_13063#1      GTGGCGATACTGCGGAGTGATATACGTTT-TCTTCCCTAACGATGACAAGGTGGGAATGA 467
consensus_13063#2      -TGGCAACA---CGAAGTGTCACTCTTTCATCCTACTGGTCGGAGGGATCGTTCTTCTTG 223
                                                                                   

consensus_13063#0      GCACTAAAAAAGAGGTTTCTAGAGAGAATTATATGCTATATATGATTTCCTTTAGAAGAT 1129
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      AACACATAAAGAAGTACGTCGAGATGATGAAAGCTGAGAACGTCTCCAGAGCGGTATTGG 527
consensus_13063#2      TACTTGTTGATGAGGAGATCCTCGCGGTGGAAGGACTCGCCGTACTTGCGGAGGAAGTCG 283
                                                                                   

consensus_13063#0      TGAAAATAGAGATCAACACTGTATTTTGTCCATGTAGAGTTTTTGCGAATAATAAAGCAA 1189
consensus_13063#3      ------------------------------------------------------------
consensus_13063#1      TTCTTCAACAGAACCTCAC----------------------------------------- 546
consensus_13063#2      CGGCGGCCCATGGCGAG------------------------------------------- 300
                                                                                   

consensus_13063#0      ACGCATATCAAAAAAAAAAAAAAAAAAAAAA 1220
consensus_13063#3      -------------------------------
consensus_13063#1      -------------------------------
consensus_13063#2      -------------------------------
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)