These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 4246 fasta sequence [CTCCAGATCCCCTTCCTCTCTCTCGATCGCCGCCGCCTCCTCGATTCTCAGCGCGCGACGCAATCTATCCCCCCGGCTCCCGCGCTTCTCCCCTCCCTCCCGCGCGGTTCCCGCGCTTCTCCTCTCCCTCTCCCGCTCGCGAAATTGCCTACCTATATGACAGAGAAATCCAGTTGCTCCAAAATTCCCCATCGCCATATTCCGCCGCTTCCGATCTCCCTCTTCCGCCGGCCACCGAATCGACAGCCACCTCGACCACAGACCCGCTCCTCTTCCACCTTGTATAATCTCTCCCGCCCCCGCAAGAAATTCCTGCCTAAAACCCTAGTTCCCCACCACCAACACCATGTCTCGTCGGAGGAAGAGGGAGGTAGCGCCGCCTCCTCAGGCCGTCGTGAGCTCTACTGCTCCATTCGCTGTTCCTACGTCGCAGGCAGCGCCATATCCATATGGGGGTCTCGGGTTCCCGCCGCCACCGACAGCTTGGCTTGCTTCTCCACAGCCACAAGCCATGCCTGGCTCTTCTGCTTTCCATCCTCCTGCGGCCGGCAAGACTGATGTGCATCCTGATCTTGAAGAATGGTATGTCTGTCAATTGGCTTTGTTAGTTCTGAATTTGCCATGCTGATTACTCCTTTTAGTGCTAAATAAAAAAAAAGAGCATGTACTGATTTACTTATTTAAGTGATGTTTCTTTGAAAAACAAAGTTACAAAGCATGCACTGAATTCTATTTAGGCTAATAAGATTTGATATCCATTTGTGACTGAAATCTGAAACAATTTGATTGTGGTTATTGCACTGAAATTTTACAGATATTGTTTGCATTTAAAAATTGTTGACATAAGTGACCACAAGCTATAAGTTTCGGTGGGATCATAATAAAAACCTGAAACAATTTGATTCGATTTTCTTGCACCTAAACACATGCAACCCATCATTCCAAATTTAAGCACACAATGTTCAGAATTATATTTCTAATCAGCATGGCCAGTGGCGAATTCACCTCCCGTGCAGCTGCCCGGGCTTCACAGCGACGATCCTTCGCTAAAATAGATTAATTCCCGGGCAGTGTGTATGCTAGTTAGAGGTAATAACGGCAAGCATGTAGGCTGCAACCGACACTTGGGTTAGGCCTCGGCTGCCTATGGCATGCATGCCTCACAAGTACTAGCCTCAATGCGTCACACGGACATGTACAGAAGCATTGAACAACTTGCTAAGTTTTAATTCTAATACCAGTTCCTTGAATGAATAGACTAACTTATTGTTGCTAGAGTTTCAGGCATAATGTAATATTTAGATGATATATATGAGATAAGTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGGAGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTGTCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGATCCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTACAACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGTAAAATTAGGAAGAAGGTCGGGAATTTTTGTTGCTCTTGGAAGGAGGTTAATTCATTATATGCTAGTGGGGAGTCTAATGAAGATCTGATGAACAAGGCACAGAAAATATATGAGAATGACTTCAAGGATGGTCCATTCTTGTTTATGCACTGTTGGAATGAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGACTCCTTTGCTACTCGCATCGTAGAGAAGATCAAGACCAAGTTTGCAGCTGGGCTACTCAAGCGCTAAAGTGGAACTAGGAAGACCATTGCAAGGGATCATGAAGAAGGTCACCGACGTCTAGTGGCTGATTACTTTGCAAATCAGCCACTCTACCCTGAGAGAATGTTTCGCACAAGATTTCGTATGCGAAAGCATCTCTTTTTACGTATCGTGCAAGCCTTAGGTCAATGGTCTCCATACTTTACTCAAAGAGAAGATTGTTCTGGTCGCACTGGCCTTTCTCCACTTCAGAAGTGCACAGCAGCGATCCGTATGTTAGCATATGGCACTCCTGCTGATGCTTTAGATGAATACTTGCTAATTGGCAAAAGCACTTCCTTAGAGTGCTTGGACACTTTTGCACGAGGGGTAGTTGAGGTCTTTGGTGGGCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCATATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCATGCACTGGAGGTGGGAGAGTTGTCCGAGAGCTTGGAGGGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTACAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGACGATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK065944 [CTCCAGATCCCCTTCCTCTCTCTCGATCGCCGCCGCCTCCTCGATTCTCAGCGCGCGACGCAATCTATCCCCCCGGCTCCCGCGCTTCTCCCCTCCCTCCCGCGCGGTTCCCGCGCTTCTCCTCTCCCTCTCCCGCTCGCGAAATTGCCTACCTATATGACAGAGAAATCCAGTTGCTCCAAAATTCCCCATCGCCATATTCCGCCGCTTCCGATCTCCCTCTTCCGCCGGCCACCGAATCGACAGCCACCTCGACCACAGACCCGCTCCTCTTCCACCTTGTATAATCTCTCCCGCCCCCGCAAGAAATTCCTGCCTAAAACCCTAGTTCCCCACCACCAACACCATGTCTCGTCGGAGGAAGAGGGAGGTAGCGCCGCCTCCTCAGGCCGTCGTGAGCTCTACTGCTCCATTCGCTGTTCCTACGTCGCAGGCAGCGCCATATCCATATGGGGGTCTCGGGTTCCCGCCGCCACCGACAGCTTGGCTTGCTTCTCCACAGCCACAAGCCATGCCTGGCTCTTCTGCTTTCCATCCTCCTGCGGCCGGCAAGACTGATGTGCATCCTGATCTTGAAGAATGGTATGTCTGTCAATTGGCTTTGTTAGTTCTGAATTTGCCATGCTGATTACTCCTTTTAGTGCTAAATAAAAAAAAAGAGCATGTACTGATTTACTTATTTAAGTGATGTTTCTTTGAAAAACAAAGTTACAAAGCATGCACTGAATTCTATTTAGGCTAATAAGATTTGATATCCATTTGTGACTGAAATCTGAAACAATTTGATTGTGGTTATTGCACTGAAATTTTACAGATATTGTTTGCATTTAAAAATTGTTGACATAAGTGACCACAAGCTATAAGTTTCGGTGGGATCATAATAAAAACCTGAAACAATTTGATTCGATTTTCTTGCACCTAAACACATGCAACCCATCATTCCAAATTTAAGCACACAATGTTCAGAATTATATTTCTAATCAGCATGGCCAGTGGCGAATTCACCTCCCGTGCAGCTGCCCGGGCTTCACAGCGACGATCCTTCGCTAAAATAGATTAATTCCCGGGCAGTGTGTATGCTAGTTAGAGGTAATAACGGCAAGCATGTAGGCTGCAACCGACACTTGGGTTAGGCCTCGGCTGCCTATGGCATGCATGCCTCACAAGTACTAGCCTCAATGCGTCACACGGACATGTACAGAAGCATTGAACAACTTGCTAAGTTTTAATTCTAATACCAGTTCCTTGAATGAATAGACTAACTTATTGTTGCTAGAGTTTCAGGCATAATGTAATATTTAGATGATATATATGAGATAAGTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGGAGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTGTCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGATCCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTACAACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGTAAAATTAGGAAGAAGGTCGGGAATTTTTGTTGCTCTTGGAAGGAGGTTAATTCATTATATGCTAGTGGGGAGTCTAATGAAGATCTGATGAACAAGGCACAGAAAATATATGAGAATGACTTCAAGGATGGTCCATTCTTGTTTATGCACTGTTGGAATGAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGACTCCTTTGCTACTCGCATCGTAGAGAAGATCAAGACCAAGTTTGCAGCTGGGCTACTCAAGCGCTAAAGTGGAACTAGGAAGACCATTGCAAGGGATCATGAAGAAGGTCACCGACGTCTAGTGGCTGATTACTTTGCAAATCAGCCACTCTACCCTGAGAGAATGTTTCGCACAAGATTTCGTATGCGAAAGCATCTCTTTTTACGTATCGTGCAAGCCTTAGGTCAATGGTCTCCATACTTTACTCAAAGAGAAGATTGTTCTGGTCGCACTGGCCTTTCTCCACTTCAGAAGTGCACAGCAGCGATCCGTATGTTAGCATATGGCACTCCTGCTGATGCTTTAGATGAATACTTGCTAATTGGCAAAAGCACTTCCTTAGAGTGCTTGGACACTTTTGCACGAGGGGTAGTTGAGGTCTTTGGTGGGCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCATATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCATGCACTGGAGGTGGGAGAGTTGTCCGAGAGCTTGGAGGGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTACAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGACGATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAtctgttgtt ] [+] EMBL CB648181 [ AATATTTCGATGATATATATGAGATAAGTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGGAGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTGTCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGATCCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTACAACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGT ] [+] EMBL AU182714 [ TCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATG ] [+] EMBL AU068685 [ GCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCATATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCATGCACTGGAGGNGGGAGAGTTGTCCGAGAGCTTNGAGGGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTG GAG ] [+] EMBL CF329035 [ GGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTACAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGACGATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGTGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCAT ] [+] EMBL AU068684 [ GCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAAAAAAAAAA ] [-] EMBL CF329036 [ GTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGTGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAA ] [-] EMBL CF327879 [ gtgaGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCCCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAA ] [+] EMBL CF327878 [ gtgaGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCCCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAA ] [+] EMBL AU078754 [ GTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAANAGTCTCTCTTTGATTANATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCNCATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTANACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_13065#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 765 fasta sequence [GAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTAT-GGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTAGGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGAGGATCCATTAATCTACTTGCTATGGTATTTTATT] [-] EMBL CB648182 [GAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTAT GGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTAGGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGAGGATCCATTAATCTACTTGCTATGGTATTTTATT] [+] EMBL BI807291 [ gcCAACNTA TTGCAAAGAAAAGACCAA GTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTATGGGATGCGCATGCAGCAACCAAGGAA GGC AAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCC AAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGC ATGGTCATATGATGCAATGGTTCAATGAAGAGTCTATCTTTGATTAGATGAAGAAATCG TATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTAaaaaaaaaa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13065#0 CTCCAGATCCCCTTCCTCTCTCTCGATCGCCGCCGCCTCCTCGATTCTCAGCGCGCGACG 60 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CAATCTATCCCCCCGGCTCCCGCGCTTCTCCCCTCCCTCCCGCGCGGTTCCCGCGCTTCT 120 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CCTCTCCCTCTCCCGCTCGCGAAATTGCCTACCTATATGACAGAGAAATCCAGTTGCTCC 180 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AAAATTCCCCATCGCCATATTCCGCCGCTTCCGATCTCCCTCTTCCGCCGGCCACCGAAT 240 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CGACAGCCACCTCGACCACAGACCCGCTCCTCTTCCACCTTGTATAATCTCTCCCGCCCC 300 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CGCAAGAAATTCCTGCCTAAAACCCTAGTTCCCCACCACCAACACCATGTCTCGTCGGAG 360 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GAAGAGGGAGGTAGCGCCGCCTCCTCAGGCCGTCGTGAGCTCTACTGCTCCATTCGCTGT 420 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TCCTACGTCGCAGGCAGCGCCATATCCATATGGGGGTCTCGGGTTCCCGCCGCCACCGAC 480 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AGCTTGGCTTGCTTCTCCACAGCCACAAGCCATGCCTGGCTCTTCTGCTTTCCATCCTCC 540 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TGCGGCCGGCAAGACTGATGTGCATCCTGATCTTGAAGAATGGTATGTCTGTCAATTGGC 600 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TTTGTTAGTTCTGAATTTGCCATGCTGATTACTCCTTTTAGTGCTAAATAAAAAAAAAGA 660 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GCATGTACTGATTTACTTATTTAAGTGATGTTTCTTTGAAAAACAAAGTTACAAAGCATG 720 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CACTGAATTCTATTTAGGCTAATAAGATTTGATATCCATTTGTGACTGAAATCTGAAACA 780 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 ATTTGATTGTGGTTATTGCACTGAAATTTTACAGATATTGTTTGCATTTAAAAATTGTTG 840 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 ACATAAGTGACCACAAGCTATAAGTTTCGGTGGGATCATAATAAAAACCTGAAACAATTT 900 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GATTCGATTTTCTTGCACCTAAACACATGCAACCCATCATTCCAAATTTAAGCACACAAT 960 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GTTCAGAATTATATTTCTAATCAGCATGGCCAGTGGCGAATTCACCTCCCGTGCAGCTGC 1020 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CCGGGCTTCACAGCGACGATCCTTCGCTAAAATAGATTAATTCCCGGGCAGTGTGTATGC 1080 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TAGTTAGAGGTAATAACGGCAAGCATGTAGGCTGCAACCGACACTTGGGTTAGGCCTCGG 1140 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CTGCCTATGGCATGCATGCCTCACAAGTACTAGCCTCAATGCGTCACACGGACATGTACA 1200 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GAAGCATTGAACAACTTGCTAAGTTTTAATTCTAATACCAGTTCCTTGAATGAATAGACT 1260 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AACTTATTGTTGCTAGAGTTTCAGGCATAATGTAATATTTAGATGATATATATGAGATAA 1320 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTT 1380 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 ATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTA 1440 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTT 1500 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGT 1560 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 ATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATA 1620 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACAC 1680 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCC 1740 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGG 1800 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTG 1860 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGAT 1920 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTAC 1980 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGT 2040 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AAAATTAGGAAGAAGGTCGGGAATTTTTGTTGCTCTTGGAAGGAGGTTAATTCATTATAT 2100 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GCTAGTGGGGAGTCTAATGAAGATCTGATGAACAAGGCACAGAAAATATATGAGAATGAC 2160 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TTCAAGGATGGTCCATTCTTGTTTATGCACTGTTGGAATGAACTAAAAAAACAACCAAAG 2220 consensus_13065#1 ---------------------------------------GAACTAAAAAAACAACCAAAG 21 ********************* consensus_13065#0 TGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGAT 2280 consensus_13065#1 TGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGAT 81 ************************************************************ consensus_13065#0 GTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAG 2340 consensus_13065#1 GTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAG 141 ************************************************************ consensus_13065#0 GCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGAT 2400 consensus_13065#1 GCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGAT 201 ************************************************************ consensus_13065#0 GACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTA 2460 consensus_13065#1 GACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTA 261 ************************************************************ consensus_13065#0 GAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACA 2520 consensus_13065#1 GAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACA 321 ************************************************************ consensus_13065#0 GCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGAT 2580 consensus_13065#1 GCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGAT 381 ************************************************************ consensus_13065#0 ATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAAT 2640 consensus_13065#1 ATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAAT 441 ************************************************************ consensus_13065#0 CAGTGAGACTCCTTTGCTACTCGCATCGTAGAGAAGATCAAGACCAAGTTTGCAGCTG-- 2698 consensus_13065#1 CAGTGAGGAAGATGTTCT-CTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGAT 500 ******* * * ** ** * * * * *** ** consensus_13065#0 GGCTACTCAAGCGCTAAAGTGGAACTAGGAAGACCATTGCAAGGGATCATGAAGAAGGTC 2758 consensus_13065#1 GGTAGTTCAGGC-----AATGGTCATATGA-------TGCAATGGTTCAATGAAGAGTCT 548 ** *** ** * *** ** ** ***** ** *** * ** consensus_13065#0 ACCGACGTCTAGTGGCTGATTACTTTGCAAATCAGCCACTCTACCCTGAGAGAATGTTTC 2818 consensus_13065#1 CTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGA-TAACATATTTATGTATTTT 607 * * *** * ** * ** *** * * ** * * * *** consensus_13065#0 GCACAAGATTTCGTATGCGAAAGCATCTCTTTTTACGTATCGTGCAAGCCTTAGGTCAAT 2878 consensus_13065#1 GCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCAT-TAAG---TAGGTT--T 661 ** ** * * * * * * *** * * * *** ***** * consensus_13065#0 GGTCTCCATACTTTACTCAAAGAGAAGATTGTTCTGGT-CGCACTGGCCT-TTCTCCACT 2936 consensus_13065#1 TGTTTT-ATCCTCTA-TTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGT 719 ** * ** ** ** * * * * ** ** * ***** *** * ** * consensus_13065#0 TCAGAAGTGCACAGCAGCGATCCGTATGTTAGCATATGGCACTCCTGCTGATGCTTTAGA 2996 consensus_13065#1 TTAGACCTG-GGAGGATCCATTAATCTACTTGC-TATGGTATTT-TATT----------- 765 * *** ** ** * * ** * * * ** ***** * * * * consensus_13065#0 TGAATACTTGCTAATTGGCAAAAGCACTTCCTTAGAGTGCTTGGACACTTTTGCACGAGG 3056 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GGTAGTTGAGGTCTTTGGTGGGCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCA 3116 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCAT 3176 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GCACTGGAGGTGGGAGAGTTGTCCGAGAGCTTGGAGGGGACAATTCACCCGTGGTGACTA 3236 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGC 3296 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATT 3356 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTA 3416 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGAC 3476 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAG 3536 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCC 3596 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 AGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCA 3656 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAAT 3716 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTC 3776 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAA 3836 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAA 3896 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGG 3956 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 CAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATC 4016 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 GTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGAC 4076 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTAT 4136 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGC 4196 consensus_13065#1 ------------------------------------------------------------ consensus_13065#0 TATGGTATTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4246 consensus_13065#1 -------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||