These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13105#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1978 fasta sequence [CATTAAATGTTGAAAATGTAGCTATATTTTTCTGTAAGCTTATTCAGACTATAAGTTTGGCTTAGGATAAACCCAAAATGAGTTATAAAATGAAACGTAGGGAGTATTACTCTACTTGTTGTCGGACACAAGTTTTACCCGGATGCGGGTATTTTTTGCCCATGTAATCCTTGGGCGAACTGAGATCTAGTTAGATTATAAATTCTAGCTAGGGGTGCCAATGGGCAAATCCGTGCAAATTGACCTTGTGGGGGTGGCATGGTGGCAGCATGCACCACCTCTGCATTGGGAAAACGGCAGTGGGGCGCTGTTTTCATGGTCGGTGACTCTGCACCGGGAACATGGCACTATGCCACCGTCTTCTTGGGTGGCTCCATTTTCACTTGCCACTTGTCGATGGACGGCGTTGGAGCTGGAGCTGCTCCTGTCGGTGGTGTCTGTGAATGCCGCCTCTCTCTGCGCCTCCCTCTCCTCCGCGCTCATAGCGGCGAGGTGTCCTTCAAGCTCTCACTGCATGACCTCTCCGTCTTGCCTAACTGCCTGAGCAAGGAGTAGATCCGTAGCAGCAACTCGCTGCTTTCACTGCACCAGCGGTGTTGCCCAAGGTGAAGGCAGGGCAGGAATCAAGGGGCAGCAGCTTGATGCTTCTTGCCATCTTGCTGCTTGTGCACGGATCCAAGATGAAGCAGTTGATCGCTGCTTGACATACCCAGTGTGGCTGCGGTGGCGCCTCCTGCAGCTGCCTGGATGCAGTGCGTGGAAGAGGAACCAATGGTCCTACCATGGTCAAGGAAATGGATTGGGTTCGTTCATTTAAAACCAAGGAAACTCCTGCCCAAAACCAATCCAACCCAAACCTTCTCACTTACATACCCAAACCAGTCCACTCCAATTATCAAACATTTGAACCCACCCAAAACAAATACATTCTTAGGGCCTGTTCTAAAGTGTGGTTTGAAATGGATGATTAGCTGCACACAAAACGAGAAACATGATTAACATGATTAAAAACTTGAAAAATGATTTTTTTTTTTATTTTTAAAGCAACTTATATATTGAAAGTTTTCGTGCAAAACACACCGTTTAACAGGTTAAAAAGCGTGCTAACCAAAAATTGAAGAAGCAAGTTGAAGCGTAGTTTAGGACGCGCTCTTAAATCTGACCCCTTCCACCCATCTCAGTCCAATTCATTATCACCCCTAGTTCTAGCTAGCAGAATGTCTTCACAGTACAATGAGTTTTTTGTGTTTTGCAAACAATCTCTTGACCAAATAAGATCCTGGCTTTTAATTTTGACATGTTTTTGGAGGCCCAAGTCATGTGCATATTTATTTCCTTGCTATAGTAACTCTGGTGATTAATCAGACCAGTGTCATTCCTGGCAGCCTAATGTGATTAGCTATGTGGTATTTGCATCTTGTTAATTTTCTGCTTCCAGTGAGTTTCTGTAGTAAGTTACTTGAGAGATAGATATACTCATCTAGCCATGTGAAGTCAACGTCTGTAATTTGTAGGTACTGCTTATATATAAATGTTGAATAAGGTCTTCAAAAATGCGAAAATCGAACTGTGCAGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAAAAAAAAAAAAAAAAAAA] [+] EMBL BE225321 [CATTAAATGTTGAAAATGTAGCTATATTTTTCTGTAAGCTTATTCAGACTATAAGTTTGGCTTAGGATAAACCCAAAATGAGTTATAAAATGAAACGTAGGGAGTATTACTCTACTTGTTGTCGGACACAAGTTTTACCCGGATGCGGGTATTTTTTGCCCATGTAATCCTTGGGCGAACTGAGATCTAGTTAGATTATAAATTCTAGCTAGGGGTGCCAATGGGCAAATCCGTGCAAATTGACCTTGTGGGGGTGGCATGGTGGCAGCATGCACCACCTCTGCATTGGGAAAACGGCAGTGGGGCGCTGTTTTCATGGTCGGTGACTCTGCACCGGGAACATGGCACTATGCCACCGTCTTCTTGGGTGGCTCCATTTTCACTTGCCACTTGTCGATGGACGGCGTTGGAGCTGGAGCTGCTCCTGTCGGTGGTGTCTGTGAATGCCGCCTCTCTCTGCGCCTCCCTCTCCTCCGCGCTCATAGCGGCGAGGTGTCCTTCAAGCTCTCACTGCATGACCTCTCCGTCTTGCCTAACTGCCTGAGCAAGGAGTAGATCCGTAGCAGCAACTCGCTGCTTTCACTGCACCAGCGGTGTTGCCCAAGGTGAAGGCAGGGCAGGAATCAAGGGGCAGCAGCTTGATGCTTCTTGCCATCTTGCTGCTTGTGCACGGATCCAAGATGAAGCAGTTGATCGCTGCTTGACATACCCAGTGTGGCTGCGGTGGCGCCTCCTGCAGCTGCCTGGATGCAGTGCGTGGAAGAGGAACCAATGGTCCTACCATGGTCAAGGAAATGGATTGGGTTCGTTCATTTAAAACCAAGGAAACTCCTGCCCAAAACCAATCCAACCCAAACCTTCTCACTTACATACCCAAACCAGTCCACTCCAATTATCAAACATTTGAACCCACCCAAAACAAATACATTCTTAGGGCCTGTTCTAAAGTGTGGTTTGAAATGGATGATTAGCTGCACACAAAACGAGAAACATGATTAACATGATTAAAAACTTGAAAAATGATTTTTTTTTTTATTTTTAAAGCAACTTATATATTGAAAGTTTTCGTGCAAAACACACCGTTTAACAGGTTAAAAAGCGTGCTAACCAAAAATTGAAGAAGCAAGTTGAAGCGTAGTTTAGGACGCGCTCTTAAATCTGACCCCTTCCACCCATCTCAGTCCAATTCATTATCACCCCTAGTTCTAGCTAGCAGAATGTCTTCACAGTACAATGAGTTTTTTGTGTTTTGCAAACAATCTCTTGACCAAATAAGATCCTGGCTTTTAATTTTGACATGTTTTTGGAGGCCCAAGTCATGTGCATATTTATTTCCTTGCTATAGTAACTCTGGTGATTAATCAGACCAGTGTCATTCCTGGCAGCCTAATGTGATTAGCTATGTGGTATTTGCATCTTGTTAATTTTCTGCTTCCAGTGAGTTTCTGTAGTAAGTTACTTGAGAGATAGATATACTCATCTAGCCATGTGAAGTCAACGTCTGTAATTTGTAGGTACTGCTTATATATAAATGTTGAATAAGGTCTTCAAAAATGCGAAAATCGAACTGTGCAGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAAAAAAAAAAAAAAAAAAA] [+] EMBL BF430502 [ CAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTG ] [+] EMBL AA749571 [ TTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACNGGGAAGTCGGAAAAAACATCTGTTATTCATCNCNCTGGAA ] consensusID : consensus_13105#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1502 fasta sequence [CTATTCCAGTCCACGACCGTCGGACCGAACCGAACCATCCAGAAGCAGCCGCCGCCCCAATTCTAAAGCATCTCCCCCCCACCCATCTCCGATCTCCACCCGCAGATCCAACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCCCGTCGCCCGCCGCGCCAAGGACGCCTTCCTCACCAAGGGCAAGCCTCTGGTCCTCGAGAAGATCCGGGAGTACGTCGCCGCCATGGCGAAGGGCGGCCCGGCTAAGGACGAGCTGGATTCCAAGAAGACCCCCACCAAGGCCGCGGCGGTAGAGGCCGGTGGCGCGGCCACCGCGCCTGCCCCTGCGGCGGAGAAGAAGGAGGAGGCGCCGGCCGTGAAGGAGAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGATGACGGAGAAATTCTACTGCCGTGCGAAGGACATGTATGAGATCTTGATGGATGAGAACAGATGGAAGGGGTTCACGC-AGAGCAATGCGAGG-ATAAGCA-GA-GAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAACCTTGTGTTGTGTTGGTTGACTCCTTGATTGTTCTGCAAAAAAAAAA] [+] EMBL AK059195 [CTATTCCAGTCCACGACCGTCGGACCGAACCGAACCATCCAGAAGCAGCCGCCGCCCCAATTCTAAAGCATCTCCCCCCCACCCATCTCCGATCTCCACCCGCAGATCCAACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCCCGTCGCCCGCCGCGCCAAGGACGCCTTCCTCACCAAGGGCAAGCCTCTGGTCCTCGAGAAGATCCGGGAGTACGTCGCCGCCATGGCGAAGGGCGGCCCGGCTAAGGACGAGCTGGATTCCAAGAAGACCCCCACCAAGGCCGCGGCGGTAGAGGCCGGTGGCGCGGCCACCGCGCCTGCCCCTGCGGCGGAGAAGAAGGAGGAGGCGCCGGCCGTGAAGGAGAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGATGACGGAGAAATTCTACTGCCGTGCGAAGGACATGTATGAGATCTTGATGGATGAGAACAGATGGAAGGGGTTCACGC AGAGCAATGCGAGG ATAAGCA GA GAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTG ] [+] EMBL AK102612 [ gACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCCCGTCGCCCGCCGCGCCAAGGACGCCTTCCTCACCAAGGGCAAGCCTCTGGTCCTCGAGAAGATCCGGGAGTACGTCGCCGCCATGGCGAAGGGCGGCCCGGCTAAGGACGAGCTGGATTCCAAGAAGACCCCCACCAAGGCCGCGGCGGTAGAGGCCGGTGGCGCGGCCACCGCGCCTGCCCCTGCGGCGGAGAAGAAGGAGGAGGCGCCGGCCGTGAAGGAGAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGATGACGGAGAAATTCTACTGCCGTGCGAAGGACATGTATGAGATCTTGATGGATGAGAACAGATGGAAGGGGTTCACGC AGAGCAATGCGAGG ATAAGCA GA GAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCT ] [+] EMBL AU222635 [ CGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACG ] [+] EMBL D42553 [ AGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACG GCNGTGGATCGTGCAGGAGCGCGCCGAC GCACCAACGTCCACAACTGGCACTGGGCGGA GCGACTGCCTCGAGTGGTCCCGCTCCCGCC ] [+] EMBL AU093508 [ CGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGA CGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAA GGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGC ] [+] EMBL BM419135 [ GGGTTTCACCCAAGACCAATGCGAGGNATAACCACGAGGAGTTCGGAGGCCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGANGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTC AACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAACCTTGTGTTGTGTTGGTTGACTCCTTGATTGTTCTGCAAAAAAAAAA] [+] EMBL AU093507 [ AGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTT CTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAAaaaaaaaaa ] [+] EMBL AA750702 [ GGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTG ] [+] EMBL AU031000 [ GCGAGGCTGGNGNGAACTCATCTTCCAGNGGATACGCGGNGTGTTTGGTTTTGGGATCTAAAGCNGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACNGTTATCCCTGTCTTTG TGTCGCNGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCAaaaaaa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13105#0 CATTAAATGTTGAAAATGTAGCTATATTTTTCTGTAAGCTTATTCAGACTATAAGTTTGG 60 consensus_13105#1 ------------------------------------------------------------ consensus_13105#0 CTTAGGATAAACCCAAAATGAGTTATAAAATGAAACGTAGGGAGTATTACTCTACTTGTT 120 consensus_13105#1 ------------------------------------------------------------ consensus_13105#0 GTCGGACACAAGTTTTACCCGGATGCGGGTATTTTTTGCCCATGTAATCCTTGGGCGAAC 180 consensus_13105#1 ------------------------------------------------------------ consensus_13105#0 TGAGATCTAGTTAGATTATAAATTCTAGCTAGGGGTGCCAATGGGCAAATCCGTGCAAAT 240 consensus_13105#1 ------------------------------------------------------------ consensus_13105#0 TGACCTTGTGGGGGTGGCATGGTGGCAGCATGCACCACCTCTGCATTGGGAAAACGGCAG 300 consensus_13105#1 ------------------------------------------------------------ consensus_13105#0 TGGGGCGCTGTTTTCATGGTCGGTGACTCTGCACCGGGAACATGGCACTATGCCACCGTC 360 consensus_13105#1 ------------------------------------------------------------ consensus_13105#0 TTCTTGGGTGGCTCCATTTTCACTTGCCACTTGTCGATGGACGGCGTTGGAGC-TGGAGC 419 consensus_13105#1 -------------CTATTCCAGTCCACGAC----CGTCGGACCGAACCGAACCATCCAGA 43 * *** * ** ** **** * * * * * ** consensus_13105#0 TGCTCCTGTCGGTGGTGTCTGTGAATGCCGCCTCTCTCTGCGCCTCCC-TCTCC-TCCGC 477 consensus_13105#1 AGCAGCCGCCGCCCCAATTCTAAAGCATCTCCCCCCCACCCATCTCCGATCTCCACCCGC 103 ** * * ** * * * ** * * * **** ***** **** consensus_13105#0 GCTCATAGCGGCGAGGTGTCCTTCAAGCTCTCACTGCATGACCTCTCCGTCTTGCCTAAC 537 consensus_13105#1 AGATCCAACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCC---C 160 * *** ** * * ***** * * * ** *** * ** * ** * consensus_13105#0 TGCCTGAGCAAGGAGTAGATCCGTAGCAGCAACTCGCTGCTTTCACTGCACCAGCGGTGT 597 consensus_13105#1 CCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCG-CGC 219 ** ** ** * ** * * ** ** *** * **** **** * consensus_13105#0 TGCCCAAGGTGAAGGCAGGGCAGGAATCAAGGGGCAGCAGCTTGA-TGCTTCTTGCCATC 656 consensus_13105#1 CGACGGCACCAACGTCCA--CAACTGGCACTGGGCGG-AGCGCGACTGCCTCGAGTGGTC 276 * * * * * ** ** **** * *** ** *** ** * ** consensus_13105#0 TTGCTGCTTGTGCACGGATCCAAGATGAAGCAGTTGATCGCTGCTTGACATACCCAGTGT 716 consensus_13105#1 CCGCTCCCGCCTCACCTCCCTCC-------TCGCCGGC--CTCCCCGTCCTCTCCGGCGA 327 *** * *** * * * ** * * * * ** * * consensus_13105#0 GGCTGCGGTGGCGCCTCCTGCAGCTGCCTGGATGCAGTGCGTGGAAGAGGAACCAATGGT 776 consensus_13105#1 GG--GCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACG-- 383 ** **** **** * *** * * * * ** * * * ** * * consensus_13105#0 CCTACCATGGTCAAGGAAATGGATTGGGTTCGTTCATTTAAAACCAAGGAAACTCCTGCC 836 consensus_13105#1 -TCAACATCCGCAAGGGGAAGG-----------TCATCCCGGGGTACGAGCTCTCCC--- 428 * *** ***** * ** **** * * **** consensus_13105#0 CAAAACCAATCCAACCCAAACCTTCTCACTTACATACCCAAACCAGTCCACTCCAATTAT 896 consensus_13105#1 -----TCACCCTCGCCTGGGAGGCCGAGGCCAC-CACCGAGTCCGGC--------GTCGT 474 ** * ** * ** *** * ** * * * consensus_13105#0 CAAACATTTGAACCCACCCAAAACAAATACATTCTTAGGGCCTGTTCTAAAGTGTGGTTT 956 consensus_13105#1 CAAGGTCTCCGGCGCCGCCGAGGTGC---CCTACCTCG---CCGACGAGAACGCCGACGA 528 *** * * * ** * * * * * * * * ** * consensus_13105#0 GAAATGGATGATTAGCTGCACACAAAACGAGAAACATGATTAACATGATTAAAAACTTGA 1016 consensus_13105#1 GGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCC-CGTCGCCCGCCGCGCCA 587 * * * * * ** *** ** * *** * * * * consensus_13105#0 AAAATGATTTTTTTTTTTATTTTTAAAGCAACTTATATATTGAAAGTTTTCGTGCAAAAC 1076 consensus_13105#1 AGGACGCCTTCCTCACCAAGGGC--AAGCCTCTGGT-CCTCGAGAAGATCCGGG---AGT 641 * * * ** * * **** ** * * ** * * ** * * consensus_13105#0 ACACCGTTTAACAGGTTAAAAAGCGTGCTAACCAAAAATTGAAGAAGCAAGTTGAAGCGT 1136 consensus_13105#1 ACGTCGCC-GCCATGGCGAAGGGCGGCCCGGCTAAGGA---------CGAGCTGGATTCC 691 ** ** ** * ** *** * * ** * * ** ** * consensus_13105#0 AGTTTAGGACGCGCTCTTAAATCTGACCCCTTCCACCCATCTCAGTCCAATTCATTATCA 1196 consensus_13105#1 A----AGAAGACCCCCACCAA---GGCCGCGGCGGTAGAGGCCGGTG-GCGCGGCCACCG 743 * ** * * * * ** * ** * * * * ** * * consensus_13105#0 CCCCTAGTTCTAGCTAGCAGAATGTCTTCACAGTACAATGAGTTTTTTGTGTTTTGCAAA 1256 consensus_13105#1 CGCCTGCCCCTG--CGGCGGAGA--------AGAAGGAGGAGGCGCCGGC----CGTGAA 789 * *** ** ** ** ** * * *** * * ** consensus_13105#0 CAATCTCTTGACCAAATAAGATCCTGGCTTTTAATTTTGACATGTTTTTGGAGGCCCAAG 1316 consensus_13105#1 GGA----------GAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGA 839 * ** *** *** * ** ** * * * * consensus_13105#0 TCATGTGCATATTTATTTCCTTGCTATAGTAACTCTGGTGATTAATCAGACCAGTGTCAT 1376 consensus_13105#1 TGACGGAGAAATTC----TACTGCCGTGCGAA----GGACATGTATGAGA---------- 881 * * * * *** *** * ** ** ** ** *** consensus_13105#0 TCCTGGCAGCCTAATGTGATTAGCTATGTGGTATTTGCATCTTGTTAATTTTCTGCTTCC 1436 consensus_13105#1 TCTTGATGG----ATGAGAACAGATGGAAGGGGTTCACGCAGAGCAATGCGAGGATAAGC 937 ** ** * *** ** ** * ** ** * * * * consensus_13105#0 AGTGAGTTTCTGTAGTAAGTTA-CTTGAGAGATAGATATACTCATCTAGCCATGTGAAGT 1495 consensus_13105#1 AGAGAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGT-----CAATCAGCGGCGTCAA-T 991 ** *** * * * * * * * *** * * ** *** ** ** * consensus_13105#0 CAACGTCTGTAATTTGTAGGTACTGCTTATATATAAATGTTGAATAAGGTCTTCAAAAAT 1555 consensus_13105#1 GAGGAGTTGCAGGAAG-GGAAGCTGATCGTGCAGAAGTGGCGGTTC-GGTAGCTGGCCAG 1049 * ** * * * *** * * * ** ** * * *** * consensus_13105#0 GCGAAAATCGAACTGTGCAGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAG 1615 consensus_13105#1 ACGGCG--TGCACT-CGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAG 1106 ** * *** * ***************************************** consensus_13105#0 TCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGG 1675 consensus_13105#1 TCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGG 1166 ************************************************************ consensus_13105#0 TGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTG 1735 consensus_13105#1 TGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTG 1226 ************************************************************ consensus_13105#0 GTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTC 1795 consensus_13105#1 GTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTC 1286 ************************************************************ consensus_13105#0 GAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGAC 1855 consensus_13105#1 GAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGAC 1346 ************************************************************ consensus_13105#0 ACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAAT 1915 consensus_13105#1 AGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAAT 1406 * ********************************************************** consensus_13105#0 GCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAAAAAAAAAAAAAAAA 1975 consensus_13105#1 GCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAACCTTGTGTTGT 1466 ********************************************* ** consensus_13105#0 AAA--------------------------------- 1978 consensus_13105#1 GTTGGTTGACTCCTTGATTGTTCTGCAAAAAAAAAA 1502 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||