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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13105#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1978 fasta sequence
[CATTAAATGTTGAAAATGTAGCTATATTTTTCTGTAAGCTTATTCAGACTATAAGTTTGGCTTAGGATAAACCCAAAATGAGTTATAAAATGAAACGTAGGGAGTATTACTCTACTTGTTGTCGGACACAAGTTTTACCCGGATGCGGGTATTTTTTGCCCATGTAATCCTTGGGCGAACTGAGATCTAGTTAGATTATAAATTCTAGCTAGGGGTGCCAATGGGCAAATCCGTGCAAATTGACCTTGTGGGGGTGGCATGGTGGCAGCATGCACCACCTCTGCATTGGGAAAACGGCAGTGGGGCGCTGTTTTCATGGTCGGTGACTCTGCACCGGGAACATGGCACTATGCCACCGTCTTCTTGGGTGGCTCCATTTTCACTTGCCACTTGTCGATGGACGGCGTTGGAGCTGGAGCTGCTCCTGTCGGTGGTGTCTGTGAATGCCGCCTCTCTCTGCGCCTCCCTCTCCTCCGCGCTCATAGCGGCGAGGTGTCCTTCAAGCTCTCACTGCATGACCTCTCCGTCTTGCCTAACTGCCTGAGCAAGGAGTAGATCCGTAGCAGCAACTCGCTGCTTTCACTGCACCAGCGGTGTTGCCCAAGGTGAAGGCAGGGCAGGAATCAAGGGGCAGCAGCTTGATGCTTCTTGCCATCTTGCTGCTTGTGCACGGATCCAAGATGAAGCAGTTGATCGCTGCTTGACATACCCAGTGTGGCTGCGGTGGCGCCTCCTGCAGCTGCCTGGATGCAGTGCGTGGAAGAGGAACCAATGGTCCTACCATGGTCAAGGAAATGGATTGGGTTCGTTCATTTAAAACCAAGGAAACTCCTGCCCAAAACCAATCCAACCCAAACCTTCTCACTTACATACCCAAACCAGTCCACTCCAATTATCAAACATTTGAACCCACCCAAAACAAATACATTCTTAGGGCCTGTTCTAAAGTGTGGTTTGAAATGGATGATTAGCTGCACACAAAACGAGAAACATGATTAACATGATTAAAAACTTGAAAAATGATTTTTTTTTTTATTTTTAAAGCAACTTATATATTGAAAGTTTTCGTGCAAAACACACCGTTTAACAGGTTAAAAAGCGTGCTAACCAAAAATTGAAGAAGCAAGTTGAAGCGTAGTTTAGGACGCGCTCTTAAATCTGACCCCTTCCACCCATCTCAGTCCAATTCATTATCACCCCTAGTTCTAGCTAGCAGAATGTCTTCACAGTACAATGAGTTTTTTGTGTTTTGCAAACAATCTCTTGACCAAATAAGATCCTGGCTTTTAATTTTGACATGTTTTTGGAGGCCCAAGTCATGTGCATATTTATTTCCTTGCTATAGTAACTCTGGTGATTAATCAGACCAGTGTCATTCCTGGCAGCCTAATGTGATTAGCTATGTGGTATTTGCATCTTGTTAATTTTCTGCTTCCAGTGAGTTTCTGTAGTAAGTTACTTGAGAGATAGATATACTCATCTAGCCATGTGAAGTCAACGTCTGTAATTTGTAGGTACTGCTTATATATAAATGTTGAATAAGGTCTTCAAAAATGCGAAAATCGAACTGTGCAGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAAAAAAAAAAAAAAAAAAA]
[+] EMBL BE225321 [CATTAAATGTTGAAAATGTAGCTATATTTTTCTGTAAGCTTATTCAGACTATAAGTTTGGCTTAGGATAAACCCAAAATGAGTTATAAAATGAAACGTAGGGAGTATTACTCTACTTGTTGTCGGACACAAGTTTTACCCGGATGCGGGTATTTTTTGCCCATGTAATCCTTGGGCGAACTGAGATCTAGTTAGATTATAAATTCTAGCTAGGGGTGCCAATGGGCAAATCCGTGCAAATTGACCTTGTGGGGGTGGCATGGTGGCAGCATGCACCACCTCTGCATTGGGAAAACGGCAGTGGGGCGCTGTTTTCATGGTCGGTGACTCTGCACCGGGAACATGGCACTATGCCACCGTCTTCTTGGGTGGCTCCATTTTCACTTGCCACTTGTCGATGGACGGCGTTGGAGCTGGAGCTGCTCCTGTCGGTGGTGTCTGTGAATGCCGCCTCTCTCTGCGCCTCCCTCTCCTCCGCGCTCATAGCGGCGAGGTGTCCTTCAAGCTCTCACTGCATGACCTCTCCGTCTTGCCTAACTGCCTGAGCAAGGAGTAGATCCGTAGCAGCAACTCGCTGCTTTCACTGCACCAGCGGTGTTGCCCAAGGTGAAGGCAGGGCAGGAATCAAGGGGCAGCAGCTTGATGCTTCTTGCCATCTTGCTGCTTGTGCACGGATCCAAGATGAAGCAGTTGATCGCTGCTTGACATACCCAGTGTGGCTGCGGTGGCGCCTCCTGCAGCTGCCTGGATGCAGTGCGTGGAAGAGGAACCAATGGTCCTACCATGGTCAAGGAAATGGATTGGGTTCGTTCATTTAAAACCAAGGAAACTCCTGCCCAAAACCAATCCAACCCAAACCTTCTCACTTACATACCCAAACCAGTCCACTCCAATTATCAAACATTTGAACCCACCCAAAACAAATACATTCTTAGGGCCTGTTCTAAAGTGTGGTTTGAAATGGATGATTAGCTGCACACAAAACGAGAAACATGATTAACATGATTAAAAACTTGAAAAATGATTTTTTTTTTTATTTTTAAAGCAACTTATATATTGAAAGTTTTCGTGCAAAACACACCGTTTAACAGGTTAAAAAGCGTGCTAACCAAAAATTGAAGAAGCAAGTTGAAGCGTAGTTTAGGACGCGCTCTTAAATCTGACCCCTTCCACCCATCTCAGTCCAATTCATTATCACCCCTAGTTCTAGCTAGCAGAATGTCTTCACAGTACAATGAGTTTTTTGTGTTTTGCAAACAATCTCTTGACCAAATAAGATCCTGGCTTTTAATTTTGACATGTTTTTGGAGGCCCAAGTCATGTGCATATTTATTTCCTTGCTATAGTAACTCTGGTGATTAATCAGACCAGTGTCATTCCTGGCAGCCTAATGTGATTAGCTATGTGGTATTTGCATCTTGTTAATTTTCTGCTTCCAGTGAGTTTCTGTAGTAAGTTACTTGAGAGATAGATATACTCATCTAGCCATGTGAAGTCAACGTCTGTAATTTGTAGGTACTGCTTATATATAAATGTTGAATAAGGTCTTCAAAAATGCGAAAATCGAACTGTGCAGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAAAAAAAAAAAAAAAAAAA]
[+] EMBL BF430502 [ CAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTG ]
[+] EMBL AA749571 [ TTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACNGGGAAGTCGGAAAAAACATCTGTTATTCATCNCNCTGGAA ]
consensusID : consensus_13105#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1502 fasta sequence
[CTATTCCAGTCCACGACCGTCGGACCGAACCGAACCATCCAGAAGCAGCCGCCGCCCCAATTCTAAAGCATCTCCCCCCCACCCATCTCCGATCTCCACCCGCAGATCCAACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCCCGTCGCCCGCCGCGCCAAGGACGCCTTCCTCACCAAGGGCAAGCCTCTGGTCCTCGAGAAGATCCGGGAGTACGTCGCCGCCATGGCGAAGGGCGGCCCGGCTAAGGACGAGCTGGATTCCAAGAAGACCCCCACCAAGGCCGCGGCGGTAGAGGCCGGTGGCGCGGCCACCGCGCCTGCCCCTGCGGCGGAGAAGAAGGAGGAGGCGCCGGCCGTGAAGGAGAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGATGACGGAGAAATTCTACTGCCGTGCGAAGGACATGTATGAGATCTTGATGGATGAGAACAGATGGAAGGGGTTCACGC-AGAGCAATGCGAGG-ATAAGCA-GA-GAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAACCTTGTGTTGTGTTGGTTGACTCCTTGATTGTTCTGCAAAAAAAAAA]
[+] EMBL AK059195 [CTATTCCAGTCCACGACCGTCGGACCGAACCGAACCATCCAGAAGCAGCCGCCGCCCCAATTCTAAAGCATCTCCCCCCCACCCATCTCCGATCTCCACCCGCAGATCCAACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCCCGTCGCCCGCCGCGCCAAGGACGCCTTCCTCACCAAGGGCAAGCCTCTGGTCCTCGAGAAGATCCGGGAGTACGTCGCCGCCATGGCGAAGGGCGGCCCGGCTAAGGACGAGCTGGATTCCAAGAAGACCCCCACCAAGGCCGCGGCGGTAGAGGCCGGTGGCGCGGCCACCGCGCCTGCCCCTGCGGCGGAGAAGAAGGAGGAGGCGCCGGCCGTGAAGGAGAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGATGACGGAGAAATTCTACTGCCGTGCGAAGGACATGTATGAGATCTTGATGGATGAGAACAGATGGAAGGGGTTCACGC AGAGCAATGCGAGG ATAAGCA GA GAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTG ]
[+] EMBL AK102612 [ gACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCCCGTCGCCCGCCGCGCCAAGGACGCCTTCCTCACCAAGGGCAAGCCTCTGGTCCTCGAGAAGATCCGGGAGTACGTCGCCGCCATGGCGAAGGGCGGCCCGGCTAAGGACGAGCTGGATTCCAAGAAGACCCCCACCAAGGCCGCGGCGGTAGAGGCCGGTGGCGCGGCCACCGCGCCTGCCCCTGCGGCGGAGAAGAAGGAGGAGGCGCCGGCCGTGAAGGAGAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGATGACGGAGAAATTCTACTGCCGTGCGAAGGACATGTATGAGATCTTGATGGATGAGAACAGATGGAAGGGGTTCACGC AGAGCAATGCGAGG ATAAGCA GA GAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCT ]
[+] EMBL AU222635 [ CGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGAGCGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAAGGGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACG ]
[+] EMBL D42553 [ AGCCCCCCCACCAAACCCTAATCCTCCTTCCCCCCCCTCCCATGGCGAAGTACGGAGAGGGCGACG GCNGTGGATCGTGCAGGAGCGCGCCGAC GCACCAACGTCCACAACTGGCACTGGGCGGA GCGACTGCCTCGAGTGGTCCCGCTCCCGCC ]
[+] EMBL AU093508 [ CGACGCGCGGTGGATCGTGCAGGAGCGCGCCGACGGCACCAACGTCCACAACTGGCACTGGGCGGA CGCGACTGCCTCGAGTGGTCCCGCTCCCGCCTCACCTCCCTCCTCGCCGGCCTCCCCGTCCTCTCCGGCGAGGGCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACGTCAACATCCGCAA GGGAAGGTCATCCCGGGGTACGAGCTCTCCCTCACCCTCGCCTGGGAGGCCGAGGCCACCACCGAGTCCGGCGTCGTCAAGGTCTCCGGCGCCGCCGAGGTGCCCTACCTCGCCGACGAGAACGCCGACGAGGACCCGGAGC ]
[+] EMBL BM419135 [ GGGTTTCACCCAAGACCAATGCGAGGNATAACCACGAGGAGTTCGGAGGCCAGTTCAGCCTCTTCGATGGGTCAATCAGCGGCGTCAATGAGGAGTTGCAGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGANGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTC AACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGACACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAACCTTGTGTTGTGTTGGTTGACTCCTTGATTGTTCTGCAAAAAAAAAA]
[+] EMBL AU093507 [ AGGAAGGGAAGCTGATCGTGCAGAAGTGGCGGTTCGGTAGCTGGCCAGACGGCGTGCACTCGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTT CTGTCGCAGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAATGCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAAaaaaaaaaa ]
[+] EMBL AA750702 [ GGAGTTACAGTCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGGTGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTGGTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACAGTTATCCCTGTCTTTG ]
[+] EMBL AU031000 [ GCGAGGCTGGNGNGAACTCATCTTCCAGNGGATACGCGGNGTGTTTGGTTTTGGGATCTAAAGCNGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTCGAGCGTTACCATGTCACNGTTATCCCTGTCTTTG TGTCGCNGTTTATTCGATGTTAGACAGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCAaaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13105#0 CATTAAATGTTGAAAATGTAGCTATATTTTTCTGTAAGCTTATTCAGACTATAAGTTTGG 60
consensus_13105#1 ------------------------------------------------------------
consensus_13105#0 CTTAGGATAAACCCAAAATGAGTTATAAAATGAAACGTAGGGAGTATTACTCTACTTGTT 120
consensus_13105#1 ------------------------------------------------------------
consensus_13105#0 GTCGGACACAAGTTTTACCCGGATGCGGGTATTTTTTGCCCATGTAATCCTTGGGCGAAC 180
consensus_13105#1 ------------------------------------------------------------
consensus_13105#0 TGAGATCTAGTTAGATTATAAATTCTAGCTAGGGGTGCCAATGGGCAAATCCGTGCAAAT 240
consensus_13105#1 ------------------------------------------------------------
consensus_13105#0 TGACCTTGTGGGGGTGGCATGGTGGCAGCATGCACCACCTCTGCATTGGGAAAACGGCAG 300
consensus_13105#1 ------------------------------------------------------------
consensus_13105#0 TGGGGCGCTGTTTTCATGGTCGGTGACTCTGCACCGGGAACATGGCACTATGCCACCGTC 360
consensus_13105#1 ------------------------------------------------------------
consensus_13105#0 TTCTTGGGTGGCTCCATTTTCACTTGCCACTTGTCGATGGACGGCGTTGGAGC-TGGAGC 419
consensus_13105#1 -------------CTATTCCAGTCCACGAC----CGTCGGACCGAACCGAACCATCCAGA 43
* *** * ** ** **** * * * * * **
consensus_13105#0 TGCTCCTGTCGGTGGTGTCTGTGAATGCCGCCTCTCTCTGCGCCTCCC-TCTCC-TCCGC 477
consensus_13105#1 AGCAGCCGCCGCCCCAATTCTAAAGCATCTCCCCCCCACCCATCTCCGATCTCCACCCGC 103
** * * ** * * * ** * * * **** ***** ****
consensus_13105#0 GCTCATAGCGGCGAGGTGTCCTTCAAGCTCTCACTGCATGACCTCTCCGTCTTGCCTAAC 537
consensus_13105#1 AGATCCAACGGAGACAAGCGCACCAAGCCCCCCCACCAAACCCTAATCCTCCTTCC---C 160
* *** ** * * ***** * * * ** *** * ** * ** *
consensus_13105#0 TGCCTGAGCAAGGAGTAGATCCGTAGCAGCAACTCGCTGCTTTCACTGCACCAGCGGTGT 597
consensus_13105#1 CCCCCTCCCATGGCGAAGTACGGAGAGGGCGACGCGCGGTGGATCGTGCAGGAGCG-CGC 219
** ** ** * ** * * ** ** *** * **** **** *
consensus_13105#0 TGCCCAAGGTGAAGGCAGGGCAGGAATCAAGGGGCAGCAGCTTGA-TGCTTCTTGCCATC 656
consensus_13105#1 CGACGGCACCAACGTCCA--CAACTGGCACTGGGCGG-AGCGCGACTGCCTCGAGTGGTC 276
* * * * * ** ** **** * *** ** *** ** * **
consensus_13105#0 TTGCTGCTTGTGCACGGATCCAAGATGAAGCAGTTGATCGCTGCTTGACATACCCAGTGT 716
consensus_13105#1 CCGCTCCCGCCTCACCTCCCTCC-------TCGCCGGC--CTCCCCGTCCTCTCCGGCGA 327
*** * *** * * * ** * * * * ** * *
consensus_13105#0 GGCTGCGGTGGCGCCTCCTGCAGCTGCCTGGATGCAGTGCGTGGAAGAGGAACCAATGGT 776
consensus_13105#1 GG--GCGGCCTCGCCCTCCGCACCACCGCGCTCGACAAGCTCGACGGCGAGGCCTACG-- 383
** **** **** * *** * * * * ** * * * ** * *
consensus_13105#0 CCTACCATGGTCAAGGAAATGGATTGGGTTCGTTCATTTAAAACCAAGGAAACTCCTGCC 836
consensus_13105#1 -TCAACATCCGCAAGGGGAAGG-----------TCATCCCGGGGTACGAGCTCTCCC--- 428
* *** ***** * ** **** * * ****
consensus_13105#0 CAAAACCAATCCAACCCAAACCTTCTCACTTACATACCCAAACCAGTCCACTCCAATTAT 896
consensus_13105#1 -----TCACCCTCGCCTGGGAGGCCGAGGCCAC-CACCGAGTCCGGC--------GTCGT 474
** * ** * ** *** * ** * * *
consensus_13105#0 CAAACATTTGAACCCACCCAAAACAAATACATTCTTAGGGCCTGTTCTAAAGTGTGGTTT 956
consensus_13105#1 CAAGGTCTCCGGCGCCGCCGAGGTGC---CCTACCTCG---CCGACGAGAACGCCGACGA 528
*** * * * ** * * * * * * * * ** *
consensus_13105#0 GAAATGGATGATTAGCTGCACACAAAACGAGAAACATGATTAACATGATTAAAAACTTGA 1016
consensus_13105#1 GGACCCGGAGCTCCGCGTCACCGTCCGCGGCGACGATGGCCC-CGTCGCCCGCCGCGCCA 587
* * * * * ** *** ** * *** * * * *
consensus_13105#0 AAAATGATTTTTTTTTTTATTTTTAAAGCAACTTATATATTGAAAGTTTTCGTGCAAAAC 1076
consensus_13105#1 AGGACGCCTTCCTCACCAAGGGC--AAGCCTCTGGT-CCTCGAGAAGATCCGGG---AGT 641
* * * ** * * **** ** * * ** * * ** * *
consensus_13105#0 ACACCGTTTAACAGGTTAAAAAGCGTGCTAACCAAAAATTGAAGAAGCAAGTTGAAGCGT 1136
consensus_13105#1 ACGTCGCC-GCCATGGCGAAGGGCGGCCCGGCTAAGGA---------CGAGCTGGATTCC 691
** ** ** * ** *** * * ** * * ** ** *
consensus_13105#0 AGTTTAGGACGCGCTCTTAAATCTGACCCCTTCCACCCATCTCAGTCCAATTCATTATCA 1196
consensus_13105#1 A----AGAAGACCCCCACCAA---GGCCGCGGCGGTAGAGGCCGGTG-GCGCGGCCACCG 743
* ** * * * * ** * ** * * * * ** * *
consensus_13105#0 CCCCTAGTTCTAGCTAGCAGAATGTCTTCACAGTACAATGAGTTTTTTGTGTTTTGCAAA 1256
consensus_13105#1 CGCCTGCCCCTG--CGGCGGAGA--------AGAAGGAGGAGGCGCCGGC----CGTGAA 789
* *** ** ** ** ** * * *** * * **
consensus_13105#0 CAATCTCTTGACCAAATAAGATCCTGGCTTTTAATTTTGACATGTTTTTGGAGGCCCAAG 1316
consensus_13105#1 GGA----------GAAGAAGGCGAAGGCGAAGGACAAGGAAGGATTCAAGACGATCGAGA 839
* ** *** *** * ** ** * * * *
consensus_13105#0 TCATGTGCATATTTATTTCCTTGCTATAGTAACTCTGGTGATTAATCAGACCAGTGTCAT 1376
consensus_13105#1 TGACGGAGAAATTC----TACTGCCGTGCGAA----GGACATGTATGAGA---------- 881
* * * * *** *** * ** ** ** ** ***
consensus_13105#0 TCCTGGCAGCCTAATGTGATTAGCTATGTGGTATTTGCATCTTGTTAATTTTCTGCTTCC 1436
consensus_13105#1 TCTTGATGG----ATGAGAACAGATGGAAGGGGTTCACGCAGAGCAATGCGAGGATAAGC 937
** ** * *** ** ** * ** ** * * * *
consensus_13105#0 AGTGAGTTTCTGTAGTAAGTTA-CTTGAGAGATAGATATACTCATCTAGCCATGTGAAGT 1495
consensus_13105#1 AGAGAGGTCGGAGGGCAGTTCAGCCTCTTCGATGGGT-----CAATCAGCGGCGTCAA-T 991
** *** * * * * * * * *** * * ** *** ** ** *
consensus_13105#0 CAACGTCTGTAATTTGTAGGTACTGCTTATATATAAATGTTGAATAAGGTCTTCAAAAAT 1555
consensus_13105#1 GAGGAGTTGCAGGAAG-GGAAGCTGATCGTGCAGAAGTGGCGGTTC-GGTAGCTGGCCAG 1049
* ** * * * *** * * * ** ** * * *** *
consensus_13105#0 GCGAAAATCGAACTGTGCAGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAG 1615
consensus_13105#1 ACGGCG--TGCACT-CGACGGTTAGGTTGGTATTTGATGAGCCTGAGTCGGGAGTTACAG 1106
** * *** * *****************************************
consensus_13105#0 TCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGG 1675
consensus_13105#1 TCATAAGCCTCAAACAAACTGATGTGCCAGAGGAAGACAGATATGGAAATTCAACTGTGG 1166
************************************************************
consensus_13105#0 TGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTG 1735
consensus_13105#1 TGGAGAACACGGAGCGAGGCTGGAGAGAACTCATCTTCCAGAGGATACGCGGAGTGTTTG 1226
************************************************************
consensus_13105#0 GTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTC 1795
consensus_13105#1 GTTTTGGGATCTAAAGCAGTACTTTGACTCTTGAGCTGGATTTCTGCTTTTCAGGAAGTC 1286
************************************************************
consensus_13105#0 GAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGAC 1855
consensus_13105#1 GAGCGTTACCATGTCACAGTTATCCCTGTCTTTGCTGTCGCAGTTTATTCGATGTTAGAC 1346
************************************************************
consensus_13105#0 ACAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAAT 1915
consensus_13105#1 AGAAACTTTGCATATTACGGGGAAGTCGGAAAAAACATCTGTTATTCATCACGCTGGAAT 1406
* **********************************************************
consensus_13105#0 GCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAAAAAAAAAAAAAAAA 1975
consensus_13105#1 GCGTCTGCAATGTTTGCCAAGTGTTAATCTGCAACTGATGGTTGAGTAACCTTGTGTTGT 1466
********************************************* **
consensus_13105#0 AAA--------------------------------- 1978
consensus_13105#1 GTTGGTTGACTCCTTGATTGTTCTGCAAAAAAAAAA 1502
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||