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Oryza sativa
cluster # 13109 cluster # 13109       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13109#0 length = 1328 sequences # 9  
consensus_13109#1 length = 713 sequences # 2  
consensus_13109#2 length = 369 sequences # 1  

consensusID : consensus_13109#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1328
fasta sequence
                              [GCCGCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAACCCTAGGCGCGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCGGCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGTTCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCAGGCGAGCGGCGGAAGTGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGCCGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCGGATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGGCGGCGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAGGAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAGAAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAATGCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTCAGGGAACGTGAAC-GGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACT-GGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTTCAAAAAAAAGG]

[+] EMBL AK066705             [GCCGCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAACCCTAGGCGCGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCGGCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGTTCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCAGGCGAGCGGCGGAAGTGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGCCGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCGGATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGGCGGCGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAGGAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAGAAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAATGCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTCAGGGAACGTGAAC GGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACT GGAATGGTTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAA                    ]
[+] EMBL OSS14730A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAAAGGAGAAGAAGAAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATATCACCGTCGTGTGATGG AAANGAGAAAAAGAAGGGCCTAAAG ATGCCTTGGGAACAGACCGTACTGTATTTAATGATGAGG ACAGCGACGNCTNGAATTGCTCAGGG ACGTG AC GGC AAAGGAGG AGAAGTGGCA CTTTTAAACGGTCCATGC AACT GG ATTGCTC AGCAt                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU165299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cggnAGAAGANGAAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAATGCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTCAGGGAACGTGAAC GGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACT GGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTaaaaaa                                                                          ]
[+] EMBL C93577               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAG AAAAGAAGGGCCTAAAGAATGCCTTGGG ACAG ACGTACTGTA TTAATGATGAGG ACAGCG CGGCT                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU031120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAATGCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTCAGGGAACGTGAACGGGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACTGGGAATGGCTCAAGCAATGAAAGAG                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB656435             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATCGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAATGCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTCAGGGAACGTGAAC GGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACT GGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGACCCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTCCCGAGCTGGCTTGTAAAATGCCGTGAGCGGATAAGGATGATTTTCAGAATCTAAGCAATCTTAGCTTCCTTAAAAGGG]
[+] EMBL AU101513             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAGAGAAAAAGAAGGGCCTAAAGAATGCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTCAGGGAACGTGAAC GGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACT GGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTTCAAAAA     ]
[+] EMBL CA757907             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTTCAAAAAAAA  ]
[+] EMBL CA757447             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTTCAAAAAAAA  ]


>consensus_13109#0 GCCGCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAACCCTAGGCG CGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCG GCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGT TCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCA GGCGAGCGGCGGAAGTGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGC CGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCG GATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGG CGGCGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAG GAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAG AAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGG GGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCA TGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAA ATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTAT GACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAAT GCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTC AGGGAACGTGAACGGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACT GGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTAC AGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCT CTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACT GTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGC TTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTTCAA AAAAAAGG



consensusID : consensus_13109#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 713
fasta sequence
                              [GCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAACCCTAGGCGCGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCGGCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGTTCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCAGGCGAGCGGCGGAAGCGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGCCGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCGGATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGGCGGCGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAGGAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAGAAAAATTCATTTTTCAATGAGTACTAAAAATTTTAAAAAGGGTAAAAACTTGAAGAAAATTTATGGAAAAAAATTGTACCACATGCAGAATCTCTCGAAAATGTCAAGGCCCAAAT]

[+] EMBL AK062618             [GCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAACCCTAGGCGCGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCGGCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGTTCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCAGGCGAGCGGCGGAAGCGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGCCGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCGGATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGGCGGCGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAGGAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAGAAAAATTCATTTTTCAATGAGTACTAAAAATTTTAAAAAGGGTAAAAACTTGAAGAAAATTTATGGAAAAAAATTGTACCACATGCAGAATCTCTCGAAAATGTCAAGGCCCAAAT]
[+] EMBL CA752687             [             TGATCCCCCTCCC  GCTCAAGAATCCTCGCGAAACCCTAGGCGCGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCGGCTGCGGCTGTGGCGGCGCGCAGNCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGTTCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_13109#1 GCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAACCCTAGGCGCGC GGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCGGCT GCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGTTCG AAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAGGAG GAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCAGGC GAGCGGCGGAAGCGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGCCGT AGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCGGAT TGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGGCGG CGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAGGAA AGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAGAAA AATTCATTTTTCAATGAGTACTAAAAATTTTAAAAAGGGTAAAAACTTGAAGAAAATTTA TGGAAAAAAATTGTACCACATGCAGAATCTCTCGAAAATGTCAAGGCCCAAAT



consensusID : consensus_13109#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 369
fasta sequence
                              [AGAGGACGAGACAAGGGGGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAGACTGGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTCCAAAAAAAAAAAAA]

[-] EMBL CA763294             [AGAGGACGAGACAAGGGGGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAGACTGGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTCCAAAAAAAAAAAAA]


>consensus_13109#2 AGAGGACGAGACAAGGGGGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAGACTGG AATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAG ATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCT ACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTATGAATACTGT AGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACCGAGCTGGCTT GTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTTAGCTCCAAAA AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13109#0      GCCGCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAACCCTAGGCG 60
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      CGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCG 120
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      GCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGT 180
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      TCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAG 240
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      GAGGAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCA 300
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      GGCGAGCGGCGGAAGTGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGC 360
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      CGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCG 420
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      GATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGG 480
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      CGGCGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAG 540
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      GAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAG 600
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      AAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGG 660
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      GGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCA 720
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------------------------------------------------
                                                                                   

consensus_13109#0      TGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAA 780
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      ------------------GCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTC 42
                                                                                   

consensus_13109#0      ATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTAT 840
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      GCGAAACCCTAGGCGCGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCC 102
                                                                                   

consensus_13109#0      GACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAAT 900
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      GGCGAGGGGGAGGCGGCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCC 162
                                                                                   

consensus_13109#0      GCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTC 960
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      GACGAGGAGGAGCGTTCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCG 222
                                                                                   

consensus_13109#0      AGGGAACGTGAACGGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACT 1020
consensus_13109#2      AGAGGACGAGACAAG--GGGGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAGACT 58
consensus_13109#1      AAGAGGCGGGAGGAGGAGGAGGAGGAGGAGGAGG-AGGAGGGGGACGCCGGGAGCGAGTC 281
                       *     ** **   *     ****** ** * ** **       ****     **     

consensus_13109#0      -----GGAATGGCTCAAGCAA-TGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATG-TA 1073
consensus_13109#2      -----GGAATGGCTCAAGCAA-TGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATG-TA 111
consensus_13109#1      CTCCGGCGAGGACTCAGGCGAGCGGCGGAAGCGGCGCAGGAAGGAAAAGGAGCGGCGGCA 341
                            *  * * **** ** *  *   **   *** * *  * *  * * *  *  *  *

consensus_13109#0      CCAGTACAGATTGGGCAATTTTGAG-GCTGCAGCTGCAATCCAGAA---AAGATTGGATC 1129
consensus_13109#2      CCAGTACAGATTGGGCAATTTTGAG-GCTGCAGCTGCAATCCAGAA---AAGATTGGATC 167
consensus_13109#1      TCGGCGGCGCCGGAGCCGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATC 401
                        * *    *   * **  *   * * ***   ***      * **     **   * ***

consensus_13109#0      CTGATGCTCCTCTACAGTAGGCAGCTTGTGG--AGAGCGATATTTTCATTTAGTTGACCC 1187
consensus_13109#2      CTGATGCTCCTCTACAGTAGGCAGCTTGTGG--AGAGCGATATTTTCATTTAGTTGACCC 225
consensus_13109#1      CGAGTCTTCTTACTCGGATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGA 461
                       *   *  ** *   * *   ****   * **  **** *  *     * * **  **   

consensus_13109#0      TTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATT 1247
consensus_13109#2      TTTTATGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATT 285
consensus_13109#1      GAG-GCGAAGGAGGCGGCGGCGGAGGAGGAG-GAAGGAGAGGGAGGAGGAGGAGAGGAGG 519
                             ***    *  *   *  * *** *  * ** *  **  **   *       *  

consensus_13109#0      TTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCA 1307
consensus_13109#2      TTACCGAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCA 345
consensus_13109#1      CGGAGGAGGAAGGATAAGGAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGA 579
                            ***   *  *    ** *  *  ** ***  ** * *         *   *   *

consensus_13109#0      ATCTTAGCTTCAAAAAAAAGG--------------------------------------- 1328
consensus_13109#2      ATCTTAGCTCCAAAAAAAAAAAAA------------------------------------ 369
consensus_13109#1      AAGAAAAAGGAGAAGAAGAAAAATTCATTTTTCAATGAGTACTAAAAATTTTAAAAAGGG 639
                       *    *      ** ** *                                         

consensus_13109#0      ------------------------------------------------------------
consensus_13109#2      ------------------------------------------------------------
consensus_13109#1      TAAAAACTTGAAGAAAATTTATGGAAAAAAATTGTACCACATGCAGAATCTCTCGAAAAT 699
                                                                                   

consensus_13109#0      --------------
consensus_13109#2      --------------
consensus_13109#1      GTCAAGGCCCAAAT 713
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)