These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13113#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1479 fasta sequence [TCCGACTCCGCTCCAATGCCGTTGCCTCTCTCCTCCCCCTCCCCCTCCCCCTCATAAGCGCGTGCGAGCCTCGCCTCGCCCTCGCCTCCGCGACCCAAACCCTAGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGGAGGGGGAGGGGGAGTGCCCCGCCGTGCTGCGGTGGCGCGCGATCCGGTGGTGGGCGC-AGGTCGCCGCCCTCGGGATCCTCCTCGCCGGTGCGGCCGCCGCCGCCGTCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTTTCTCGAGTGGAAAAA] [+] EMBL AK065880 [TCCGACTCCGCTCCAATGCCGTTGCCTCTCTCCTCCCCCTCCCCCTCCCCCTCATAAGCGCGTGCGAGCCTCGCCTCGCCCTCGCCTCCGCGACCCAAACCCTAGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGGAGGGGGAGGGGGAGTGCCCCGCCGTGCTGCGGTGGCGCGCGATCCGGTGGTGGGCGC AGGTCGCCGCCCTCGGGATCCTCCTCGCCGGTGCGGCCGCCGCCGCCGTCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGGAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTT ] [+] EMBL CB664565 [ GTGCGAGCCTCGCCTCGCCCTCGCCTCCGCGACCCAAACCCTAGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGG ] [+] EMBL AU091342 [ AGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGGAGGGGGAGGGGGAGTGCCCCGCCGTGCTGCGGTGGCGCGCGATCCGGTGGTGGGCGC AGGTCGCCGCCCTCGGGATCCT ] [+] EMBL C74198 [ GCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGC TTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCNGCGCCGGCGAGTACATCAGGATCCCGGANGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAAGGGGANGGGGAAGGGGAGTNCCCCGCCGTGCTGCGGTNGCGCGCGATCCGGTGGTNGGCGCAAGTTTNCCGCCCTCGGGAT TTTCTCGCCGGTGCGGCCGaaa ] [+] EMBL CF303581 [ TCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAA ] [+] EMBL AU100808 [ TCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGNGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGA ] [+] EMBL CF196505 [ TGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGNNNNNAGCACTTCAAAAACTCCAAGCAGA ] [+] EMBL CF196465 [ TGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCNNANACTCCAAGCNNNTGATGAGCTGTGTTGACTCTTGATGnnnacnn ] [+] EMBL CB000405 [ TGTGGATGGCGGGGATGNCCTTTGGATATTTCCTTTGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCC TTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCA ] [-] EMBL CB664566 [ GGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTTTAGTGTCTGCTACCTGACTACATTTGATTTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTTT ] [+] EMBL AK121562 [ TCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACGGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCC TTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTT ] [+] EMBL AU100807 [ AGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTTTCTCGAGTGGAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||