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Oryza sativa
cluster # 13131 cluster # 13131       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13131#0 length = 1033 sequences # 8  
consensus_13131#1 length = 568 sequences # 1  
consensus_13131#2 length = 257 sequences # 2  
consensus_13131#3 length = 240 sequences # 1  

consensusID : consensus_13131#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1033
fasta sequence
                              [TCAATAGCACCATTTTTTCATTACAATGGTTGCTCTGTATTGCTTTCAAACAGGCATAGTTGCAAGGAAAATATTACTGTCA-TCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA-ACATTCCTAAAGCAAAAATCATGC-TGC-TGCAG-ATCTTTCAT-T-GCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCC-ACTGGC-TCA-CACAAATCATGATAAACACG-CAATCGCTCCTTTACC-ACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACAC-TGTGGAGGAGGCAGTAGTGGAGGCATGTACA-TTCGAGGA-CCACCATTTTCGCCCT-CCATATCAATGGACGCTACATTAAAATTTCCACCACACTGGCTGCACAT-CCTTCTACCAAGGCATTTTGCAAGCAGAGCCTCTTCTCGGAGTTTGAGGTTGA-TGACC-AAAT-CAATATCCGTGACTCCTTC-AAGTATCTCCGCTTGTCTTATGGTTCTTGGAAAACCATCAAGGATGAAGCCCAGCTCACCCTTTTCTGCTCCCTCTTCAAGCCGCTTTGACAGAAGATTTATTATGATCTCATCCGACACTAGCTTTCCATTATTCACAATCTCCGCAAGCTGCTCGGAGAAGGGGCCCGGGGAGGCGAGGGCGTCGCGGACGAGATCGCCGGTGGCGATGTGGGGCACGCGGAGCATCTGCGAGAGGCGGCTGGCGTAGGTGCCCTTCCCCACC]

[+] EMBL CB670040             [TCAATAGCACCAGAATTTCATTACAATGGTTGCTCTGTATTGCTTTCAAACAGGCATAGTTGCAAGGAAAATATTACTGTCA TCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA ACATTCCTAAAGCAAAAATCATGC TGC TGCAG ATCTTTCAT T GCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCC ACTGGC TCA CACAAATCATGATAAACACG CAATCGCTCCTTTACC ACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACAC TGTGGAGGAGGCAGTAGTGGAGGCATGTACA TTCGAGGA CCACCATTTTCGCCCT CCATATCAATGGACGCTACATTAAAATTTCCACCACACTGGCTGCACAT CCTTCTACCAAGGCATTTTGCAAGCAGAGCCTCTTCTCGGAGTTTGAGGTTGA TGACC AAAT CAATATCCGTGACTCCTTC AAGTATCTCCG                                                                                                                                                                                                                                                              ]
[-] EMBL BI812224             [            TTTTTTCATTACAATGG TGCTCTGTA TGCTTTCAAACAGGCATAGTTGCAAGGAAAATATTACTGTCACTCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTA TGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAA TTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGACACATTCCTACAGCAAAAATCATGCGTGCATGCAGCATCTTTCATGT GCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCCAAGTGGCGTCACCACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BI812280             [            TTTTTTCATTACAATGGTTGCTCTGTATTGCTTTCAAACAGGCATAGTTGCAAGGAAAATATTACTGTCA TCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAA TTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA ACATTCCTAAAGCAAAAATCATGC TGC TGCAG ATCTTTCAT T GCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCC ACTGGC TCA CACAAATCATGATAAACACG CAATCGCTCCTTTACCAACCTCTTCAGTATCAatc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB655030             [                                                     GCATAGTTGCAAGGAAAACCTTTATGTCA TCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA ACATTCCTAAAGCAAAAATCATGC TGC TGCAG ATCTTTCAT T GCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCC ACTGGC TCA CACAAATCATGATAAACACG CAATCGCTCCTTTACC ACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACAC TGTGGAGGAGGCAGTAGTGGAGGCATGTACA TTCGAGGA CCACCATTTTCGCCCT CCATATCAATGGACGCTACATTAAAATTTCCACCACACTGGCTGCACAT CCTTCTACCAAGGCATTTTGCAAGCAGAGCCTCTTCTCGGAGTTTGAGGTTGA TGACC AAAT CAATATCCGTGACTCCTTT CAGTATCTCCGCTTGTCTTA                                                                                                                                                                                                                                                     ]
[-] EMBL BM420505             [                                                       ttttTTTCAAGGAAAATATTACTGTCA TCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAG TGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAATTTGGGTAACCCGATNGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA ACATTCCTAAAGCAAAAATCATGC TGC TGCAG ATCTTTCAT TGGCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCC ACTGGC TCA CACAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB675398             [                                                                  GAAAATATTACTGTCA TCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA ACATTCCTAAAGCAAAAATCATGC TGC TGCAG ATCTTTCAT T GCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCC ACTGGC TCA CACAAATCATGATAAACACG CAATCGCTCCTTTACC ACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACAC TGTGGAGGAGGCAGTAGTGGAGGCATGTACA TTCGAGGA CCACCATTTTCGCCCT CCATATCAATGGACGCTACATTAAAATTTCCACCACACTGGCTGCACAT CCTTCTACCAAGGCATTTTGCAAGCAGAGCCTCTTCTCGGAGTTTGAGGTTGA TGACC AAAT CAATATCCGTGACTCCTTC AAGTATCTCCGCTTGTCTTATGGTTCTTGGAAAACCATCAAGGATGAAGCCCAGCTCACCCTTTTCT                                                                                                                                                                                                      ]
[-] EMBL BP432966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAGTCCTCC A TGGG TCA CACAAATCAT ATAAACACGCCAAT GCTCCTTTACC NCCTTTTCAG ATCATCAGGCCTAGTTATCAACTTTGATTCACACTTGTGGAGGAGGCAGTAGTGGAGGCATGTACATTTCGAGGACCCACCATTTTCGCCCTCCCATATCAATGGACGNTACATTAAAATTTCCACCACACTGGCTGCACATCCCTTCTACCAAGGCATTTTGCAAGCAGAGCCTCTTCTCGGAGTTTGAGGTTGA TGACC AAAT CAATATCCGTGACTCCTTC AAGTATCTCCGCTTGTCTTATGGTTCTTGGAAAACCATCAAGGATGAAGCCCAGCTCACCCTTTTCTGCTCCCTCTTCAAGCCGCTTTGACAGAAGATTTATTATGATCTCATCCGACACTAGCTTTCCATTATTCACAATCTCCGCAAGCTGCTCGGAGAAGGGGCCCGGGGAGGCGAGGGCGTCGCGGACGAGATCGCCGGTGGCGATGTGGGGCACGCGGAGCATCTGCGAGAGGCGGCTGGCGTAGGTGCCCTTCCCCACC]
[-] EMBL C73923               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTTTNAGGTTGATTGACCAAAATCCAATATCCGTGACTCCTTCAAAGTATCTCCGCTTGTCTTATGGTTCTTGGAAAACCATCAAGGATGAAGCCCAGCTCACCCTTTTCTGCTCCCTCTTCAAGCCGCTTTGACAGAAGATTTATTATGATCTCATCCGACACTAGCTTTCCATTATTCACAATCTCCGCAAGCTGCTCGGAGAAGGGGCCCGGGGAGGCGAGGGCGTCGCGGACGAGATC CCGGTGGCGATGTGGGGCACGCGGAGCATCTGCGAGAGGCGGCTGGCGTAGGTGCCCTTCCC    ]


>consensus_13131#0 TCAATAGCACCATTTTTTCATTACAATGGTTGCTCTGTATTGCTTTCAAACAGGCATAGT TGCAAGGAAAATATTACTGTCATCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAG TTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACC AGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAG TGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATAC TCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGAACATTCCTAAAGCAA AAATCATGCTGCTGCAGATCTTTCATTGCCAGGGTCTAAATTCAATGCTTGCAGTAACTT CGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCT GTAGAAGTCCTCCACTGGCTCACACAAATCATGATAAACACGCAATCGCTCCTTTACCAC CTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACACTGTGGAGGAGGCAGTAG TGGAGGCATGTACATTCGAGGACCACCATTTTCGCCCTCCATATCAATGGACGCTACATT AAAATTTCCACCACACTGGCTGCACATCCTTCTACCAAGGCATTTTGCAAGCAGAGCCTC TTCTCGGAGTTTGAGGTTGATGACCAAATCAATATCCGTGACTCCTTCAAGTATCTCCGC TTGTCTTATGGTTCTTGGAAAACCATCAAGGATGAAGCCCAGCTCACCCTTTTCTGCTCC CTCTTCAAGCCGCTTTGACAGAAGATTTATTATGATCTCATCCGACACTAGCTTTCCATT ATTCACAATCTCCGCAAGCTGCTCGGAGAAGGGGCCCGGGGAGGCGAGGGCGTCGCGGAC GAGATCGCCGGTGGCGATGTGGGGCACGCGGAGCATCTGCGAGAGGCGGCTGGCGTAGGT GCCCTTCCCCACC



consensusID : consensus_13131#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 568
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGAACATTCCTAAAGCAAAAATCATGCTGCTGCAGATCTTTCATTGCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCCACTGGCTCACACAAATCATGATAAACACGCAATCGCTCCTTTACCACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACACTGTGGAGGAGGCAGTAGTGGAGGCATGTACATTCGAGGACCACCATTTTCGCCCTCCATATCAATGGACGCTACATTAAAATTTCCACCAC]

[+] EMBL CF324717             [TTTTTTTTTTTTTTTTTTTTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGAACATTCCTAAAGCAAAAATCATGCTGCTGCAGATCTTTCATTGCCAGGGTCTAAATTCAATGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGTTTACCACGTGCTCTGTAGAAGTCCTCCACTGGCTCACACAAATCATGATAAACACGCAATCGCTCCTTTACCACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACACTGTGGAGGAGGCAGTAGTGGAGGCATGTACATTCGAGGACCACCATTTTCGCCCTCCATATCAATGGACGCTACATTAAAATTTCCACCAC]


>consensus_13131#1 TTTTTTTTTTTTTTTTTTTTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATT TAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCA CCTATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAGA GGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGAA CATTCCTAAAGCAAAAATCATGCTGCTGCAGATCTTTCATTGCCAGGGTCTAAATTCAAT GCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAGT TTACCACGTGCTCTGTAGAAGTCCTCCACTGGCTCACACAAATCATGATAAACACGCAAT CGCTCCTTTACCACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACACTGT GGAGGAGGCAGTAGTGGAGGCATGTACATTCGAGGACCACCATTTTCGCCCTCCATATCA ATGGACGCTACATTAAAATTTCCACCAC



consensusID : consensus_13131#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 257
fasta sequence
                              [TTTTTTTTTTTTAGTTGCAAGGAAAATATTACTGTCATCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAAAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCGATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTC]

[+] EMBL CF335512             [TTTTTTTTTTTTAGTTGCAAGGAAAATATTACTGTCATCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAAAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCGATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACT ]
[-] EMBL CF335513             [ TTTTTTTTTTTAGTTGCAAGGAAAATATTACTGTCATCACAAGGCTTGCCTTGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCATTTAAGAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATCACCTATACAATTGAGTGCTATATCGATATAATTTTGGTAACCCGATTGAACTACTTCTAGAGGTACAAGGAATACTC]


>consensus_13131#2 TTTTTTTTTTTTAGTTGCAAGGAAAATATTACTGTCATCACAAGGCTTGCCTTGTGTTGC TTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCAT TTAAAAATAACAACCAGCACACTCATCGATCATGGCATCATGCAAGATCGATGATGAATC ACCTATACAATTGAGTGCTATATCGATATAATTTTGGTAACCCGATTGAACTACTTCTAG AGGTACAAGGAATACTC



consensusID : consensus_13131#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 240
fasta sequence
                              [TTTTTTCATTACAAGGGTGCTCTGTATTGCTTTCAAACAGGCATAGTGCAAGGGAAAATATTACTGTCATCACAAGGCTTGCCTATGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATGGTTTATGGAAGCTTCTCTCCATTTCAAGAATAACAACCAGCGACCACTCCATCGCATCCATGGCATCATGCCAAGCATCGCATGCATGCAATCCACCTCATACAATTGA]

[-] EMBL BI812228             [TTTTTTCATTACAAGGGTGCTCTGTATTGCTTTCAAACAGGCATAGTGCAAGGGAAAATATTACTGTCATCACAAGGCTTGCCTATGTGTTGCTTTCAACAAGCATAGTTGGCTACAAATAAATGTGTATGGTTTATGGAAGCTTCTCTCCATTTCAAGAATAACAACCAGCGACCACTCCATCGCATCCATGGCATCATGCCAAGCATCGCATGCATGCAATCCACCTCATACAATTGA]


>consensus_13131#3 TTTTTTCATTACAAGGGTGCTCTGTATTGCTTTCAAACAGGCATAGTGCAAGGGAAAATA TTACTGTCATCACAAGGCTTGCCTATGTGTTGCTTTCAACAAGCATAGTTGGCTACAAAT AAATGTGTATGGTTTATGGAAGCTTCTCTCCATTTCAAGAATAACAACCAGCGACCACTC CATCGCATCCATGGCATCATGCCAAGCATCGCATGCATGCAATCCACCTCATACAATTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13131#2      ---------------------------------------TTTTTTTTT------TTTAGT 15
consensus_13131#3      ------------TTTTTTCATTACAAGGGT-GCTCTGTATTGCTTTCAAACAGGCATAGT 47
consensus_13131#0      TCAATAGCACCATTTTTTCATTACAATGGTTGCTCTGTATTGCTTTCAAACAGGCATAGT 60
consensus_13131#1      ------------------------------------------------------------
                                                                                   

consensus_13131#2      TGCAAGGAAAATATTACTGTCATCACAAGGCTTGCCT-TGTGTTGCTTTCAACAAGCATA 74
consensus_13131#3      GCAAGGGAAAATATTACTGTCATCACAAGGCTTGCCTATGTGTTGCTTTCAACAAGCATA 107
consensus_13131#0      TGCAAGGAAAATATTACTGTCATCACAAGGCTTGCCT-TGTGTTGCTTTCAACAAGCATA 119
consensus_13131#1      -----------------------------------------------TTTTTTTTTTTTT 13
                                                                      **         * 

consensus_13131#2      GTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCA--TTTAAAAATAACA 132
consensus_13131#3      GTTGGCTACAAATAAATGTGTAT-GGTTTATGGAAGCTTCTCTCCATTTCAAGAATAACA 166
consensus_13131#0      GTTGGCTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCA--TTTAAGAATAACA 177
consensus_13131#1      TTTTTTTACAAATAAATGTGTATTGGTTTATTGGAAGCTTTCTCA--TTTAAGAATAACA 71
                        **   ***************** ******* * *   * ****   ** ** *******

consensus_13131#2      ACCAGCA--CACTC-ATCG--ATCATGGCATCATGC--AAGATCG-ATG---ATGAATCA 181
consensus_13131#3      ACCAGCGACCACTCCATCGCATCCATGGCATCATGCCAAGCATCGCATGCATGCAATCCA 226
consensus_13131#0      ACCAGCA--CACTC-ATCG--ATCATGGCATCATGC--AAGATCG-ATG---ATGAATCA 226
consensus_13131#1      ACCAGCA--CACTC-ATCG--ATCATGGCATCATGC--AAGATCG-ATG---ATGAATCA 120
                       ******   ***** ****    *************  *  **** ***      *  **

consensus_13131#2      CCT-ATACAATTGAGTGCTATATCGATATAATTTTGGTAACCCGATTGAACTACTTCTAG 240
consensus_13131#3      CCTCATACAATTGA---------------------------------------------- 240
consensus_13131#0      CCT-ATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAG 285
consensus_13131#1      CCT-ATACAATTGAGTGCTATATCAATATAATTTTGGTAACCCGATTGAACTACTTCTAG 179
                       *** **********                                              

consensus_13131#2      AGGTACAAGGAATACTC------------------------------------------- 257
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      AGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA 345
consensus_13131#1      AGGTACAAGGAATACTCATTACTTAACTACTTCTGGCGTAGGGCTACAAATACATAACGA 239
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      ACATTCCTAAAGCAAAAATCATGCTGCTGCAGATCTTTCATTGCCAGGGTCTAAATTCAA 405
consensus_13131#1      ACATTCCTAAAGCAAAAATCATGCTGCTGCAGATCTTTCATTGCCAGGGTCTAAATTCAA 299
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      TGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAG 465
consensus_13131#1      TGCTTGCAGTAACTTCGGCCATGATTCTGGAATTCCTCCTGGTAGATTGAACTCCAATAG 359
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      TTTACCACGTGCTCTGTAGAAGTCCTCCACTGGCTCACACAAATCATGATAAACACGCAA 525
consensus_13131#1      TTTACCACGTGCTCTGTAGAAGTCCTCCACTGGCTCACACAAATCATGATAAACACGCAA 419
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      TCGCTCCTTTACCACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACACTG 585
consensus_13131#1      TCGCTCCTTTACCACCTCTTCAGTATCATCAGGCCTAGTTATCAACTTTGATTCACACTG 479
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      TGGAGGAGGCAGTAGTGGAGGCATGTACATTCGAGGACCACCATTTTCGCCCTCCATATC 645
consensus_13131#1      TGGAGGAGGCAGTAGTGGAGGCATGTACATTCGAGGACCACCATTTTCGCCCTCCATATC 539
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      AATGGACGCTACATTAAAATTTCCACCACACTGGCTGCACATCCTTCTACCAAGGCATTT 705
consensus_13131#1      AATGGACGCTACATTAAAATTTCCACCAC------------------------------- 568
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      TGCAAGCAGAGCCTCTTCTCGGAGTTTGAGGTTGATGACCAAATCAATATCCGTGACTCC 765
consensus_13131#1      ------------------------------------------------------------
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      TTCAAGTATCTCCGCTTGTCTTATGGTTCTTGGAAAACCATCAAGGATGAAGCCCAGCTC 825
consensus_13131#1      ------------------------------------------------------------
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      ACCCTTTTCTGCTCCCTCTTCAAGCCGCTTTGACAGAAGATTTATTATGATCTCATCCGA 885
consensus_13131#1      ------------------------------------------------------------
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      CACTAGCTTTCCATTATTCACAATCTCCGCAAGCTGCTCGGAGAAGGGGCCCGGGGAGGC 945
consensus_13131#1      ------------------------------------------------------------
                                                                                   

consensus_13131#2      ------------------------------------------------------------
consensus_13131#3      ------------------------------------------------------------
consensus_13131#0      GAGGGCGTCGCGGACGAGATCGCCGGTGGCGATGTGGGGCACGCGGAGCATCTGCGAGAG 1005
consensus_13131#1      ------------------------------------------------------------
                                                                                   

consensus_13131#2      ----------------------------
consensus_13131#3      ----------------------------
consensus_13131#0      GCGGCTGGCGTAGGTGCCCTTCCCCACC 1033
consensus_13131#1      ----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)