These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1651 fasta sequence [CGCCTTCGCTTAATAATCTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAGGACTTACTGCCTCAACGAAAGAAAGCGTATAGAATCACTTGGCGGCTATGTTGATGATGGCTATTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAAAACTACTTAAAAGGA] [+] EMBL AK099720 [CGCCTTCGCTTAATAATCTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCGTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAGGACTTACTGCCTCAACGAAAGAAAGCGTATAGAATCACTTGGCGGCTATGTTGATGATGGCTATTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAgttcta ] [+] EMBL CB655552 [ CTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAGGACTTGCTGCCTCAACGAAAGAAAGCGTATAGAATCACTTGGCGGCTATGTTGATG ] [+] EMBL CB654058 [ CCTCCCCCTTA TAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAG ] [+] EMBL CB640257 [ GGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCACCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTCGATTACAAGCAGGCTATGCCGAGCAGCTGTGCCCCAGTTATCCGATCAAGGGACTGGTCGGATATCGGAGGTCGCGATCACATGGAAGATGCTCATGTCTGC ] [-] EMBL CB655553 [ AATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGGGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAGTACCGGGATTGTTAGTGTGATTAAAAAAAAAACTTAAAAGGA] [+] EMBL BI797855 [ TTGTGCTGCAACCAGATCGTCGAGGAGGCCATAAGGCGA GGGCCTCAGACAACCTAAC GCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATATCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAAAA ] [+] EMBL BI795688 [ GAATAAAACC ACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAAA ] consensusID : consensus_13142#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 796 fasta sequence [TTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCC-ACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCC-AATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCC-AATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAATAATTAAAAGG] [-] EMBL CB654059 [TTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCC ACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCC AATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCC AATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTAGGGGTGTGATTAAAAGTTCTATCGTGTGATGAATCCTTAAAAGG] [+] EMBL BI795411 [ GGTGAT GTCTCATTCCAACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGA GGTCGAGCGGAGCATATC GCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAAATGATATCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGT CAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAATAAaaa ] [+] EMBL BI797292 [ TGAGATCTCACCTTGCGTTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAAAAA ] consensusID : consensus_13142#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 468 fasta sequence [ANTCGNNANGCTTGTNNGGGGCGCGANAGGGCGTGNNACCGGANTTGAAATGTNCAGGGCCCAGGACTTGCTGCCTAACGAAAGAAAGCGTNTAGAATNACTTGGCGGNTCTGTTGNTGATGGCTTTTTGGATGGTNATTAGCAAGACAGCTATAGCATTGGGTGACTGNNATCTCGAGGGTCTGACANANNTGGGTGAGCCAGGGCGGCCCCTTGNGCGCGGANCCANANCTCANGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGNGACGGCNTCTGGGACTTCTTCTCGAACCAGANTGCCGTGGATTTCANCANGAAGAGGCTNCAAGANCACACTGACTTGANGTTGAGCTGCAAGCAGATCGTCNAGGNGGCNATAAGGCGANGGNCCTTATACAACCTAACGGCAGGNGATGNTCTTATTCCACCANNGAGGCCGCCTTCTCAGCTC] [+] EMBL CA765038 [ANTCGNNANGCTTGTNNGGGGCGCGANAGGGCGTGNNACCGGANTTGAAATGTNCAGGGCCCAGGACTTGCTGCCTAACGAAAGAAAGCGTNTAGAATNACTTGGCGGNTCTGTTGNTGATGGCTTTTTGGATGGTNATTAGCAAGACAGCTATAGCATTGGGTGACTGNNATCTCGAGGGTCTGACANANNTGGGTGAGCCAGGGCGGCCCCTTGNGCGCGGANCCANANCTCANGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGNGACGGCNTCTGGGACTTCTTCTCGAACCAGANTGCCGTGGATTTCANCANGAAGAGGCTNCAAGANCACACTGACTTGANGTTGAGCTGCAAGCAGATCGTCNAGGNGGCNATAAGGCGANGGNCCTTATACAACCTAACGGCAGGNGATGNTCTTATTCCACCANNGAGGCCGCCTTCTCAGCTC] consensusID : consensus_13142#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence [CGAGAGCATAAGCGAGGGCCTCAGCAACTAACGCGTGATGTCTCATCCACCAGGAGCCCCTCCTCAGCTCAGATGACAGGACGGGGAGGTCGAGCGGACATATCGCTGAAGGCTTCACAGCCTCCAGGTGCTCCTGGAAGCCCAATGATATCTCCACTGCTATCATCACCTTGAAGTTGTCAGAATTGAAGAGAAACCTTATCTTGATGTTGTCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAAATCCAGACATCCATTTTGAGAATAAACCACGACGGAGATCTCACCCATGAGCCAGCATGTAATAATTGGAATATAGTAAGGATTGATATCACAGGGGCTTGAGGCTCATTACGAGTATTCCCGGTCATCGGTAAAAAAAATACCGGGATGTTAGGTGATAAATTCTATCGGGAGAATAAAAAAAAAA] [+] EMBL BI797639 [CGAGAGCATAAGCGAGGGCCTCAGCAACTAACGCGTGATGTCTCATCCACCAGGAGCCCCTCCTCAGCTCAGATGACAGGACGGGGAGGTCGAGCGGACATATCGCTGAAGGCTTCACAGCCTCCAGGTGCTCCTGGAAGCCCAATGATATCTCCACTGCTATCATCACCTTGAAGTTGTCAGAATTGAAGAGAAACCTTATCTTGATGTTGTCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAAATCCAGACATCCATTTTGAGAATAAACCACGACGGAGATCTCACCCATGAGCCAGCATGTAATAATTGGAATATAGTAAGGATTGATATCACAGGGGCTTGAGGCTCATTACGAGTATTCCCGGTCATCGGTAAAAAAAATACCGGGATGTTAGGTGATAAATTCTATCGGGAGAATAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 CGCCTTCGCTTAATAATCTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAG 60 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 AATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCC 120 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 GTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAG 180 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 CTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAAC 240 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 TCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAG 300 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 ACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGT 360 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 CGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATT 420 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 ACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAG 480 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 TGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAG 540 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 CTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTG 600 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 AGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGT 660 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 GCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAA 720 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 GGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCG 780 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ------------------------------------------------------------ consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 CAATTGAAATGTCCAAGGACCACAGGACTTACTGCCTCAACGAAAGAAAGCGTATAGAAT 840 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 ----------------------------TTTGAATGGTCAATTAGCAGTCACTAGAGCAT 32 consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 CACTTGGCGGCTATGTTGATGATGGCTATTTGAATGGTCAATTAGCAGTCACTAGAGCAT 900 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 TGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCG 92 consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 TGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCG 960 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 CGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAA 152 consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 CGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAA 1020 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 GCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGC 212 consensus_13142#3 ------------------------------------------------------------ consensus_13142#0 GCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGC 1080 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 TCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGC 272 consensus_13142#3 ----------------------------------------------CGAGAGCATAAG-C 13 consensus_13142#0 TCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGC 1140 consensus_13142#2 ------------------------------------------------------------ consensus_13142#1 GAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTC 332 consensus_13142#3 GAGGG-CCTCAG-CAAC-TAACGC--GTGATG-TCTCAT-CCACCAGGAG-CCCCTCCTC 65 consensus_13142#0 GAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTC 1200 consensus_13142#2 -------------ANTCGNNANGCTTGTNNGGGGCGCGA-----NAGGGCGTGNNACCGG 42 * * * ** * * * *** ** consensus_13142#1 AGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACA 392 consensus_13142#3 AGCTCAGAT--GACAGGACGGGGAGG-TCGAGCGGA-CATATCG-CTGAAGG-CTTCACA 119 consensus_13142#0 AGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACA 1260 consensus_13142#2 ANTTGAAATGTNCAGGGCCCAGGA----CTTGCTG--CCTAACGAAAGAAAGCGTNTAGA 96 * * * * ** * *** * ** * * ** ** *** * * * * consensus_13142#1 GCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTA-TCATCAGCCTTGAAGT 451 consensus_13142#3 GCCTCCAGGTGCTCCTGGAAGCCCAATGATATCTCCACTGCTA-TCATCA-CCTTGAAGT 177 consensus_13142#0 GCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTA-TCATCAGCCTTGAAGT 1319 consensus_13142#2 ATNACTTGGCGGNTCTG-----TTGNTGATGGCTTTTTGGATGGTNATTAGCAAGACAGC 151 * ** * *** **** ** * * * ** * * ** consensus_13142#1 TGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTG-CAGAATTGAA-GAGCAACTGT 509 consensus_13142#3 TGT-CAGAATTGAAGAGAAACCTTATCTTGATGTTGT--CAGAATTGAA-GAGCAACTGT 233 consensus_13142#0 TGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTG-CAGAATTGAA-GAGCAACTGT 1377 consensus_13142#2 TAT--AGCATTG--GGTGACTGNNATCTCGAGGGTCTGACANANNTGGGTGAGCCAGGGC 207 * * ** **** * * **** ** * * * ** * ** **** * * consensus_13142#1 ATTTAGTGATTTTCGGCATCTT-GCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGT 568 consensus_13142#3 ATTTAGTGATTTTCGGCATCTT-GCTGTTTACCCCCAAATC----CAGACATCC------ 282 consensus_13142#0 ATTTAGTGATTTTCGGCATCTT-GCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGT 1436 consensus_13142#2 GGCCCCTTGNGCGCGGANCCANANCTCANGATGATCACACTGACGAAGGAAGACGAG--- 264 * *** * ** * ** * * * consensus_13142#1 GTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCC 628 consensus_13142#3 -----ATTTTG--AGAATAAACC--ACGA--CGGAGATCTCACCC------ATGAGCC-- 323 consensus_13142#0 GTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCC 1496 consensus_13142#2 -----TTCTTGATAATAGGAAGNGACGGCNTCTGGGACTTCTTCT-------CGAACC-- 310 * ** * * ** * * * ** ** * ** * consensus_13142#1 AGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGG 688 consensus_13142#3 -AGCAT-GTAAT--AATTGGAATATAGTAAG----------GATTGATAT-----CACAG 364 consensus_13142#0 AGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGG 1556 consensus_13142#2 -AGANT-GCCGT-GGATTTCANCANGAAGAGG---------CTNCAAGAN-----CACAC 353 * * * ** * * ** consensus_13142#1 GGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGG 748 consensus_13142#3 GGGCTTGAGGCTCATTACGAG---TATTCCCG-GTCATCGGTAAAAAAA---ATACCGGG 417 consensus_13142#0 GGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGG 1616 consensus_13142#2 TGACTTGANGTTGAGCTGCAAGCAGATCGTCNAGGNGGCNATAAGGCGANGGNCCTTATA 413 * **** * * * ** * * * *** * consensus_13142#1 ATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAATAATTAAAAGG--------- 796 consensus_13142#3 AT-GTTAG-GTGAT---AAATTCTATCGGGAGAATAAAAAAAAAA------------ 457 consensus_13142#0 ATTGTTAGTGTGATTAAAAAAACTACTTAAAAGGA---------------------- 1651 consensus_13142#2 CAACCTAA--CGGCAGGNGATGNTCTTATTCCACCANNGAGGCCGCCTTCTCAGCTC 468 ** * * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||