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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13157#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2970 fasta sequence
[TGTGACCTACTCTCCCCTCACCCCTTCATCAATTCGGCTCAGAGGCTGCTCCTCCTCAGTCCTGAGTCTCCTGTCCTCATCTCCATTTTGTTTTCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGGTGGAGTGCAGTGCAGAGATTCAAGAAGTTCAAGATCGAACAGGCCTGCTGGTATGAACCCTGTTCATGTTTTTTGCTTGCTCTGTGTAATCTCTCTGGGCTCTGGCCATCTGGTGCTGGAGAGATTGGAGATTTGCTGCATAATCATTGGTTCATTACTACCAGTTGTTTGTTGAAGCTCCATTAATTGGGGATTCAGTGGTTCTTGTTTTGGTATTTCCTCTTACCATTTCTTAGGGTGGTTTTGGTTGATGTATTTTCCCACAAATTCATTCCATGCGTGGAGTTCTTGATGGCTAATCCATAGTGGTTTCAGGCTTTCAGCTGCTATTCTTCTTTTTGTTTTTTCTCCTCCCCCAAATTGTCTGCTGTATGGAACAGAGAGCAGTTCATTATGTTTTCTGGATGCTCTTGTATGCCTTTTTTTAATCAAACTGTCAGCTTCTGTTCTCTGTCCATGCTTCTTCTGGGCTTTGACCTGAAAGATTGTGGTTTAGAACATTAAATCTGCACCCCAAAAACCATATATTGTCCGACATGCAGAAGTGGAAATGTGAGCTCTTGTTTAATGCTGCTCATTTGTTGCCTCTTTTCAAGAAAATGAAAATTTGTTACAATTGCGTGGTCTAGTTCTTGTTTTCTTCCATCCCTGTATTAGATAAGGAGTTTGGTAGGCACTGTCACATGATTTTGTGCCGCAATTGATTTTATTCATTAGATTAGTAACCTAAGGAATCCAAGAACATTAGGGTACATTAATAAAATGCAAAGAAACAGGGACAGAAGAGAGTAGGTTCTTTACTTTGCCCAGTTGGCATCCCCTGAAGTGATGCTTGATGCTTCCTTCCATTTTGATTATCTCTTGCTGCTGTTGGTGGTAAATCATTATTATTAGTACTACCTTTTTTATTTTTCGGAAGAAGAAAAAGAGGAACAAGCCAATGTGGCCTACATAATATGTGGTCTAGAAAGTTGGCATCAGTAGTGTGTTGATGCAATTTGAGGAAATTAAGGCAGAAAGGAAGGGACAGGAAAAGGGGCTGAAAGGTTTGCTTGAGCATAGTGCATCTCCACACCTTAAAATTGCTGGTCAAATTGTCCTTAAAATCGTTTATATCACGCAGACGGCATATCGTTCTCGACATTGCCTTCCTTAACTCCTGTGTTAATTCGACCACAACTTTAGAACAGCTTGTTGAGATTTCTTAATCCCAGTGTTGTATGTCAACATTGCATTGATTGTAGTATTATTATGAGAAGATTAGATACTGTAACCCCTCCAGAGAGTGACATCCATTGCCTTCTGTTACTGGATTTCTGCCAATTCTTAGTTAGATTTATGGATAAAAAGTTTTTAACCAAGTAGACTTAACAGGACCAAAGGTTGAATTTGTTCACCTAAGAAAAATGTACAATTTGTTGAACAAACAGCACAATTCTTGAATGAGGAGATTTTTAGTAGTCAGGTTTGTTGTTTGGATATCATAGTTTTTGAATGAGGAGAACATATTGGTTGGATTTACTGCGTGGACATCACAATTATTGAATTTGGAGAACAAATTGGTTAGATTTGTTGTGTGGATATCATACTTCTTGAATTAGAAGACCAAACTAGTTGTTTCTTTGAACAAATTGGTTAGAATTATTTTTTTTTTAAAAAAATCATTTTTCCCTTCATGAATTAGGAACAGACAGATTGATGCCCATGTTACCATGGTGGTGTCTGACTCATTGCAGTCTTATCTTTTTACACTCTCTAGTTTTCCCAAGCTGCAATCATGGTGGCCAAGTGCATGCCATGATGCACCTCTCATATACCACCATCTCTGCATGCTCAAGAACATCATGATTTTTTGTTCTTCTTGTCACCAACTTTTTTTTTGTTTTTCCCCCTAACTTCTTTTCACCCTTGCAACGCACTTCTCACTCGTAGCTTTAGTTTTCCTCTTGTCAGTAGCATATGTTTGTTTAGTTGTGATAAATTATCTTTTTTTTCCAGATCATGCCTTGTGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAAGGTCGGCACG-ACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGCCGCGCCGCCGCACGCCA-CAGCCGCGGCGACGACGCCGCGGCGGCTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAGCGCCGAGGAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAGAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCAATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATCGTCGCAATGCAAGTTCTTCGTGGTGATGTGTATGATGTACCCGTAATTGCGTATTTTAACTTTTGGAGTGAATGTCTCCTCGTTTTAAAAAA]
[+] EMBL AK072131 [TGTGACCTACTCTCCCCTCACCCCTTCATCAATTCGGCTCAGAGGCTGCTCCTCCTCAGTCCTGAGTCTCCTGTCCTCATCTCCATTTTGTTTTCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGGTGGAGTGCAGTGCAGAGATTCAAGAAGTTCAAGATCGAACAGGCCTGCTGGTATGAACCCTGTTCATGTTTTTTGCTTGCTCTGTGTAATCTCTCTGGGCTCTGGCCATCTGGTGCTGGAGAGATTGGAGATTTGCTGCATAATCATTGGTTCATTACTACCAGTTGTTTGTTGAAGCTCCATTAATTGGGGATTCAGTGGTTCTTGTTTTGGTATTTCCTCTTACCATTTCTTAGGGTGGTTTTGGTTGATGTATTTTCCCACAAATTCATTCCATGCGTGGAGTTCTTGATGGCTAATCCATAGTGGTTTCAGGCTTTCAGCTGCTATTCTTCTTTTTGTTTTTTCTCCTCCCCCAAATTGTCTGCTGTATGGAACAGAGAGCAGTTCATTATGTTTTCTGGATGCTCTTGTATGCCTTTTTTTAATCAAACTGTCAGCTTCTGTTCTCTGTCCATGCTTCTTCTGGGCTTTGACCTGAAAGATTGTGGTTTAGAACATTAAATCTGCACCCCAAAAACCATATATTGTCCGACATGCAGAAGTGGAAATGTGAGCTCTTGTTTAATGCTGCTCATTTGTTGCCTCTTTTCAAGAAAATGAAAATTTGTTACAATTGCGTGGTCTAGTTCTTGTTTTCTTCCATCCCTGTATTAGATAAGGAGTTTGGTAGGCACTGTCACATGATTTTGTGCCGCAATTGATTTTATTCATTAGATTAGTAACCTAAGGAATCCAAGAACATTAGGGTACATTAATAAAATGCAAAGAAACAGGGACAGAAGAGAGTAGGTTCTTTACTTTGCCCAGTTGGCATCCCCTGAAGTGATGCTTGATGCTTCCTTCCATTTTGATTATCTCTTGCTGCTGTTGGTGGTAAATCATTATTATTAGTACTACCTTTTTTATTTTTCGGAAGAAGAAAAAGAGGAACAAGCCAATGTGGCCTACATAATATGTGGTCTAGAAAGTTGGCATCAGTAGTGTGTTGATGCAATTTGAGGAAATTAAGGCAGAAAGGAAGGGACAGGAAAAGGGGCTGAAAGGTTTGCTTGAGCATAGTGCATCTCCACACCTTAAAATTGCTGGTCAAATTGTCCTTAAAATCGTTTATATCACGCAGACGGCATATCGTTCTCGACATTGCCTTCCTTAACTCCTGTGTTAATTCGACCACAACTTTAGAACAGCTTGTTGAGATTTCTTAATCCCAGTGTTGTATGTCAACATTGCATTGATTGTAGTATTATTATGAGAAGATTAGATACTGTAACCCCTCCAGAGAGTGACATCCATTGCCTTCTGTTACTGGATTTCTGCCAATTCTTAGTTAGATTTATGGATAAAAAGTTTTTAACCAAGTAGACTTAACAGGACCAAAGGTTGAATTTGTTCACCTAAGAAAAATGTACAATTTGTTGAACAAACAGCACAATTCTTGAATGAGGAGATTTTTAGTAGTCAGGTTTGTTGTTTGGATATCATAGTTTTTGAATGAGGAGAACATATTGGTTGGATTTACTGCGTGGACATCACAATTATTGAATTTGGAGAACAAATTGGTTAGATTTGTTGTGTGGATATCATACTTCTTGAATTAGAAGACCAAACTAGTTGTTTCTTTGAACAAATTGGTTAGAATTATTTTTTTTTTAAAAAAATCATTTTTCCCTTCATGAATTAGGAACAGACAGATTGATGCCCATGTTACCATGGTGGTGTCTGACTCATTGCAGTCTTATCTTTTTACACTCTCTAGTTTTCCCAAGCTGCAATCATGGTGGCCAAGTGCATGCCATGATGCACCTCTCATATACCACCATCTCTGCATGCTCAAGAACATCATGATTTTTTGTTCTTCTTGTCACCAACTTTTTTTTTGTTTTTCCCCCTAACTTCTTTTCACCCTTGCAACGCACTTCTCACTCGTAGCTTTAGTTTTCCTCTTGTCAGTAGCATATGTTTGTTTAGTTGTGATAAATTATCTTTTTTTTCCAGATCATGCCTTGTGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAAGGTCGGCACG ACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGCCGCGCCGCCGCACGCCA CAGCCGCGGCGACGACGCCGCGGCGGCTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAGCGCCGAGGAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAGAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCAATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAG ]
[+] EMBL AK120609 [ GTCTCCTGTCCTCATCTCCATTTTGTTTTCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGGTGGAGTGCAGTGCAGAGATTCAAGAAGTTCAAGATCGAACAGGCCTGCTGGTATGAACCCTGTTCATGTTTTTTGCTTGCTCTGTGTAATCTCTCTGGGCTCTGGCCATCTGGTGCTGGAGAGATTGGAGATTTGCTGCATAATCATTGGTTCATTACTACCAGTTGTTTGTTGAAGCTCCATTAATTGGGGATTCAGTGGTTCTTGTTTTGGTATTTCCTCTTACCATTTCTTAGGGTGGTTTTGGTTGATGTATTTTCCCACAAATTCATTCCATGCGTGGAGTTCTTGATGGCTAATCCATAGTGGTTTCAGGCTTTCAGCTGCTATTCTTCTTTTTGTTTTTTCTCCTCCCCCAAATTGTCTGCTGTATGGAACAGAGAGCAGTTCATTATGTTTTCTGGATGCTCTTGTATGCCTTTTTTTAATCAAACTGTCAGCTTCTGTTCTCTGTCCATGCTTCTTCTGGGCTTTGACCTGAAAGATTGTGGTTTAGAACATTAAATCTGCACCCCAAAAACCATATATTGTCCGACATGCAGAAGTGGAAATGTGAGCTCTTGTTTAATGCTGCTCATTTGTTGCCTCTTTTCAAGAAAATGAAAATTTGTTACAATTGCGTGGTCTAGTTCTTGTTTTCTTCCATCCCTGTATTAGATAAGGAGTTTGGTAGGCACTGTCACATGATTTTGTGCCGCAATTGATTTTATTCATTAGATTAGTAACCTAAGGAATCCAAGAACATTAGGGTACATTAATAAAATGCAAAGAAACAGGGACAGAAGAGAGTAGGTTCTTTACTTTGCCCAGTTGGCATCCCCTGAAGTGATGCTTGATGCTTCCTTCCATTTTGATTATCTCTTGCTGCTGTTGGTGGTAAATCATTATTATTAGTACTACCTTTTTTATTTTTCGGAAGAAGAAAAAGAGGAACAAGCCAATGTGGCCTACATAATATGTGGTCTAGAAAGTTGGCATCAGTAGTGTGTAGATGCAATTTGAGGAAATTAAGGCAGAAAGGAAGGGACAGGAAAAGGGGCTGAAAGGTTTGCTTGAGCATAGTGCATCTCCACACCTTAAAATTGCTGGTCAAATTGTCCTTAAAATCGTTTATATCACGCAGACGGCATATCGTTTTCGACATTGCCTTCCTTAACTCCTGTGTTAATTCGACCACAACTTTAGAACAGCTTGTTGAGATTTCTTAATCCCAGTGTTGTATGTCAACATTGCATTGATTGTAGTATTATTATGAGAAGATTAGATACTGTAACCCCTCCAGAGAGTGACATCCATTGCCTTCTGTTACTGGATTTCTGCCAATTCTTAGTTAGATTTATGGATAAAAAGTTTTTAACCAAGTAGACTTAACAGGACCAAAGGTTGAATTTGTTCACCTAAGAAAAATGTACAATTTGTTGAACAAACAGCACAATTCTTGAATGAGGAGATTTTTAGTAGTCAGGTTTGTTGTTTGGATATCATAGTTTTTGAATGAGGAGAACATATTGGTTGGATTTACTGCGTGGACATCACAATTATTGAATTTGGAGAACAAATTGGTTAGATTTGTTGTGTGGATATCATACTTCTTGAATTAGAAGACCAAACTAGTTGTTTCTTTGAACAAATTGGTTAGAATTATTTTTTTTTTAAAAAAATCATTTTTCCCTTCATGAATTAGGAACAGACAGATTGATGCCCATGTTACCATGGTGGTGTCTGACTCATTGCAGTCTTATCTTTTTACACTCTCTAGTTTTCCCAAGCTGCAATCATGGTGGCCAAGTGCATGCCATGATGCACCTCTCATATACCACCATCTCTGCATGCTCAAGAACATCATGATTTTTTGTTCTTCTTGTCACCAAC TTTTTTTTGTTTTTCCCCCTAACTTCTTTTCACCCTTGCAACGCACTTCTCACTCGTAGCTTTAGTTTTCCTCTTGTCAGTAGCATATGTTTGTTTAGTTGTGATAAATTATCTTTTTTTTCCAGATCATGCCTTGTGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAAGGTCGGCACG ACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGCCGCGCCGCCGCACGCCA CAGCCGCGGCGACGACGCCGCGGCGGCTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAGCGCCGAGGAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAGAAGGCGGCGGCGGGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCAATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATC ]
[+] EMBL AU077504 [ TCGGCACGAACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGA GCCATCAAGGCCGCGCCGCCGCACGCCANCAG CGCGGCGACGACGCCGCGGCGGCTGAGGCTGCAGAGCAGCCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAGCGCCGAGGAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAGAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCAATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATCGTCGCAAaaaa ]
[+] EMBL AU064430 [ CAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAGCGCCGAGGAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAGAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCG ]
[+] EMBL AU166062 [ CGTGCAAGACGNCGGCGTGCAGGAGGAGCTCTAGTACCACGCC GCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAGAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCAATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATCGTCGCAATGCAAaaaaaa ]
[+] EMBL CF308423 [ CTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCAATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATCGTCGCAATGCAAGTTCTTCGTGGTGATGTGTATGATGTACCCGTAATTGCGTATTTTAACTTTTGGAGTGAATGTCTCCTCGTTTTAAAAA ]
[-] EMBL CF308424 [ TCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCAATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATCGTCGCAATGCAAGTTCTTCGTGGTGATGTGTATGATGTACCCGTAATTGCGTATTTTAACTTTTGGAGTGAATGTCTCCTCGTTTTAAAAAA]
consensusID : consensus_13157#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 926 fasta sequence
[CCCCTCACCCCTTCATCAATTCGGCTCAGAGGCTGCTCCTCCTCAGTCCTGAGTCTCCTGTCCTCATCTCCATTTTGTTTTCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGGTGGAGTGCAGTGCAGAGATTCAAGAAGTTCAAGATCGAACAGGCCTGCTGATCATGCCTTGTGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAAGGTCGGCACGA-CGNCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGCCGCGCCGCCGCACGCCACAGCCGCGGCGACGACGC--CGGCGGNCTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGA-NCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAGCGCCGAG-GAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAAAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAMATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTSSAATBCGGAATBGCATTATGTTTGATATAGTAATTATATTGTTGTTATTAAAATKBTCTBTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATAAAAAAAAAAA]
[+] EMBL OSS15458A [CCCCTCACCCCTTCATCAATTCGGCTCAGAGGCTGCTCCTCCTCAGTCCTGAGTCTCCTGTCCTCATCTCCATTTTGTTTTCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGGTGGAGTGCAGTGCAGAGATTCAAGAAGTTCAAGATCGAACAGGCCTGCTGATCATGCCTTGTGCTGCGGNCGAGCTCGCCAATGGCGAGGCGGCGGCA NAGCAGCATGCGCG ]
[+] EMBL AU077505 [ CCTCATCTCCATTTTGTTTTCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGGTGGAGTGCAGTGCAGAGATTCAAGAAGTTCAAGATCGAACAGGCCTGCTGATCATGCCTTGAGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAAGGTCGGCACGA CGNCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGCCGCGCCGCCGCACGCCACAGCCGCGGCGACGACGC CGGCGGNCTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGA NCAGCCCGAGGAAGATCGC ]
[+] EMBL CF325752 [ AGAGATTCAAGAAGTTCAAGATCGAACAGGCCTGCTGATCATGCCTTGTGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAAGGTCGGCACGACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGCCGCGCCGCCGCACGCCACAGCCGCGGCGACGACGCCGCGGCGG CTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAGCGCCGAG GAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAAAAGGCGGCGGCGAGGGGGC ]
[+] EMBL AA754282 [ cGAG GSCGAGVGVGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCAVGCCGGCCAGCTSCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAGAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTGCGGGAACCCGATGAGCAGCCGGCTGGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGTTCGCGTGAGCAGAMATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTSSAATBCGGAATBGCATTATGTTTGATATAGTAATTATATTGTTGTTATTAAAATKBTCTBTTGCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGCCATAAAAAAAAAAA]
consensusID : consensus_13157#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[CAGAAAGGAAGGGACAGGAAAAGGGGCTGAAAGATCATGCCTTGTGCTGCGGCCGAGCTCGCCCATGGCGAGGCGGCGGCNGCAGCAGCATGCGCGGTGAAGGTCGGCACGACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCANGGCCGCGCCGCCGCACGCCACAGCCGCGGCGACGACCCCCCGGCGGCTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCNGCGGGCGGCGCACTGACCGCGTGAGCGCCCAGGAGTCGTCGGCGTGCAAGACGGCNGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAAAAAGCGGCGGCAAGGGGGCGCCGCGGCGTCCGCNGCNTGGAGGTGGTGGACGTGAGGTGCGGGAACCGATGAGCACCGGCTGAGGAGCTGGGATTCTCCAGCTGTCNGAGAGTTCGCGTGAGCAGAATCAGATC]
[+] EMBL CA755029 [CAGAAAGGAAGGGACAGGAAAAGGGGCTGAAAGATCATGCCTTGTGCTGCGGCCGAGCTCGCCCATGGCGAGGCGGCGGCNGCAGCAGCATGCGCGGTGAAGGTCGGCACGACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCANGGCCGCGCCGCCGCACGCCACAGCCGCGGCGACGACCCCCCGGCGGCTGAGGCGGCAGAGCAGCCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTCGTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCNGCGGGCGGCGCACTGACCGCGTGAGCGCCCAGGAGTCGTCGGCGTGCAAGACGGCNGCGTGCAGGAGGAGCTCTAGTACCACGCCGGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAAAAAAGCGGCGGCAAGGGGGCGCCGCGGCGTCCGCNGCNTGGAGGTGGTGGACGTGAGGTGCGGGAACCGATGAGCACCGGCTGAGGAGCTGGGATTCTCCAGCTGTCNGAGAGTTCGCGTGAGCAGAATCAGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13157#0 TGTGACCTACTCTCCCCTCACCCCTTCATCAATTCGGCTCAGAGGCTGCTCCTCCTCAGT 60
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CCTGAGTCTCCTGTCCTCATCTCCATTTTGTTTTCTCCTCCTCCTCCTCTCTCTCTCTCT 120
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CTCTCTCTCTCTCTCTCTCTGTCTCTCTGGTGGAGTGCAGTGCAGAGATTCAAGAAGTTC 180
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 AAGATCGAACAGGCCTGCTGGTATGAACCCTGTTCATGTTTTTTGCTTGCTCTGTGTAAT 240
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CTCTCTGGGCTCTGGCCATCTGGTGCTGGAGAGATTGGAGATTTGCTGCATAATCATTGG 300
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TTCATTACTACCAGTTGTTTGTTGAAGCTCCATTAATTGGGGATTCAGTGGTTCTTGTTT 360
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TGGTATTTCCTCTTACCATTTCTTAGGGTGGTTTTGGTTGATGTATTTTCCCACAAATTC 420
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 ATTCCATGCGTGGAGTTCTTGATGGCTAATCCATAGTGGTTTCAGGCTTTCAGCTGCTAT 480
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TCTTCTTTTTGTTTTTTCTCCTCCCCCAAATTGTCTGCTGTATGGAACAGAGAGCAGTTC 540
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 ATTATGTTTTCTGGATGCTCTTGTATGCCTTTTTTTAATCAAACTGTCAGCTTCTGTTCT 600
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CTGTCCATGCTTCTTCTGGGCTTTGACCTGAAAGATTGTGGTTTAGAACATTAAATCTGC 660
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 ACCCCAAAAACCATATATTGTCCGACATGCAGAAGTGGAAATGTGAGCTCTTGTTTAATG 720
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CTGCTCATTTGTTGCCTCTTTTCAAGAAAATGAAAATTTGTTACAATTGCGTGGTCTAGT 780
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TCTTGTTTTCTTCCATCCCTGTATTAGATAAGGAGTTTGGTAGGCACTGTCACATGATTT 840
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TGTGCCGCAATTGATTTTATTCATTAGATTAGTAACCTAAGGAATCCAAGAACATTAGGG 900
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TACATTAATAAAATGCAAAGAAACAGGGACAGAAGAGAGTAGGTTCTTTACTTTGCCCAG 960
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TTGGCATCCCCTGAAGTGATGCTTGATGCTTCCTTCCATTTTGATTATCTCTTGCTGCTG 1020
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TTGGTGGTAAATCATTATTATTAGTACTACCTTTTTTATTTTTCGGAAGAAGAAAAAGAG 1080
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 GAACAAGCCAATGTGGCCTACATAATATGTGGTCTAGAAAGTTGGCATCAGTAGTGTGTT 1140
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 GATGCAATTTGAGGAAATTAAGGCAGAAAGGAAGGGACAGGAAAAGGGGCTGAAAGGTTT 1200
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 GCTTGAGCATAGTGCATCTCCACACCTTAAAATTGCTGGTCAAATTGTCCTTAAAATCGT 1260
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TTATATCACGCAGACGGCATATCGTTCTCGACATTGCCTTCCTTAACTCCTGTGTTAATT 1320
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CGACCACAACTTTAGAACAGCTTGTTGAGATTTCTTAATCCCAGTGTTGTATGTCAACAT 1380
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TGCATTGATTGTAGTATTATTATGAGAAGATTAGATACTGTAACCCCTCCAGAGAGTGAC 1440
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 ATCCATTGCCTTCTGTTACTGGATTTCTGCCAATTCTTAGTTAGATTTATGGATAAAAAG 1500
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TTTTTAACCAAGTAGACTTAACAGGACCAAAGGTTGAATTTGTTCACCTAAGAAAAATGT 1560
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 ACAATTTGTTGAACAAACAGCACAATTCTTGAATGAGGAGATTTTTAGTAGTCAGGTTTG 1620
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TTGTTTGGATATCATAGTTTTTGAATGAGGAGAACATATTGGTTGGATTTACTGCGTGGA 1680
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CATCACAATTATTGAATTTGGAGAACAAATTGGTTAGATTTGTTGTGTGGATATCATACT 1740
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TCTTGAATTAGAAGACCAAACTAGTTGTTTCTTTGAACAAATTGGTTAGAATTATTTTTT 1800
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TTTTAAAAAAATCATTTTTCCCTTCATGAATTAGGAACAGACAGATTGATGCCCATGTTA 1860
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 CCATGGTGGTGTCTGACTCATTGCAGTCTTATCTTTTTACACTCTCTAGTTTTCCCAAGC 1920
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ------------------------------------------------------------
consensus_13157#0 TGCAATCATGGTGGCCAAGTGCATGCCATGATGCACCTCTCATATACCACCATCTCTGCA 1980
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 -------------------------------------CCCCTCACCCCTTCATCAATTCG 23
consensus_13157#0 TGCTCAAGAACA--TCATGATT--TTTTGTTCTTCTTGTCACCAACTTTTTTTTTGTTTT 2036
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 -GCTCAGAGGCTGCTCCTCCTCAGTCCTGAGTCTCCTGTCCTCATCTCCATTTTGTTTTC 82
consensus_13157#0 TCCCCCTAACTTCTTTTCACCCTTGCAACGCACTTCTCACTCGTAGCTTTAGTTTTCCTC 2096
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 TCCTCCT--CCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTC---TCTCTGTCTCTCTGG 137
consensus_13157#0 TTGTCAGTAGCATATGTTTGTTTAGTTGTGATAAATTATCTTTTTTTTCCAGATCATGCC 2156
consensus_13157#2 -----------------CAGAAAGGAAGGGACAGGAAAAGGGGCTGA--AAGATCATGCC 41
consensus_13157#1 TGGAGTGCAGTGCAGAGAT-TCAAGAAGTTCAAGATCGAACAGGCCTG-CTGATCATGCC 195
* * * *********
consensus_13157#0 TTGTGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAA 2216
consensus_13157#2 TTGTGCTGCGGCCGAGCTCGCCCATGGCGAGGCGGCGGCNGCAGCAGCATGCGCGGTGAA 101
consensus_13157#1 TTGTGCTGCGGCCGAGCTCGCCAATGGCGAGGCGGCGGCAGCAGCAGCATGCGCGGTGAA 255
********************** **************** ********************
consensus_13157#0 GGTCGGCACGACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGC 2276
consensus_13157#2 GGTCGGCACGACCGGCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCANGGC 161
consensus_13157#1 GGTCGGCACGAC-GNCACCATCGGCTCGCTGATGACGAGGGAGCTGGAGGCCATCAAGGC 314
************ * ***************************************** ***
consensus_13157#0 CGCGCCGCCGCACGCCACAGCCGCGGCGACGACGCCGCGGCGGCTGAGGCGGCAGAGCAG 2336
consensus_13157#2 CGCGCCGCCGCACGCCACAGCCGCGGCGACGACCCCCCGGCGGCTGAGGCGGCAGAGCAG 221
consensus_13157#1 CGCGCCGCCGCACGCCACAGCCGCGGCGACGACGCCGGCG-GNCTGAGGCGGCAGAGCAG 373
********************************* ** * * *****************
consensus_13157#0 CCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTC 2396
consensus_13157#2 CCCGGTGTCGGTGCCATGCGGAGCCAGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTC 281
consensus_13157#1 CCCGGTGTCGGTGCCATGCGGANC-AGCCCGAGGAAGATCGCCGCGCTGAGGAAGAGCTC 432
********************** * ***********************************
consensus_13157#0 GTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAG 2456
consensus_13157#2 GTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCNGCGGGCGGCGCACTGACCGCGTGAG 341
consensus_13157#1 GTCCAGCCTCTCCACCACCAGCAGCGGCGGCGGCAGCGGGCGGCGCACTGACCGCGTGAG 492
********************************** *************************
consensus_13157#0 CGCCGAGGAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCC 2516
consensus_13157#2 CGCCCAGGAGTCGTCGGCGTGCAAGACGGCNGCGTGCAGGAGGAGCTCTAGTACCACGCC 401
consensus_13157#1 CGCCGAGGAGTCGTCGGCGTGCAAGACGGCGGCGTGCAGGAGGAGCTCTAGTACCACGCC 552
**** ************************* *****************************
consensus_13157#0 GGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAA 2576
consensus_13157#2 GGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAA 461
consensus_13157#1 GGCCAGCTCCCCGATGCTCGCGGCGGACGTCGACCGGAGCGGCGGCGGCGGCAAGGCGAA 612
************************************************************
consensus_13157#0 GAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTG 2636
consensus_13157#2 AAAAGCGGCGGCAAGGGGGCGCCGCGGCGTCCGCNGCNTGGAGGTGGTGGACGTGAGGTG 521
consensus_13157#1 AAAGGCGGCGGCGAGGGGGCGCCGCGGCGTCGGCGGCGTGGAGGTGGTGGACGTGAGGTG 672
** ******** ****************** ** ** **********************
consensus_13157#0 CGGGAACCCGATGAGCAGCCGGCTG-AGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGT 2695
consensus_13157#2 CGGGAACC-GATGAGCA-CCGGCTG-AGGAG-CTGGGATTCTCCA-GCTGTCNGAGA-GT 575
consensus_13157#1 CGGGAACCCGATGAGCAGCCGGCTGGAGGAGGCTGGGATTCTCCAAGCTGTCGGAGACGT 732
******** ******** ******* ***** ************* ****** **** **
consensus_13157#0 TCGCGTGAGCAGAA-TCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTGCA 2754
consensus_13157#2 TCGCGTGAGCAGAA-TCAGATC-------------------------------------- 596
consensus_13157#1 TCGCGTGAGCAGAMATCAGATCGTCTTCAGTCCTGACGGCGAGCTGTGTCGCGAATTSSA 792
************* *******
consensus_13157#0 ATTCGGAATTGCATTATGTTTGCTATAGTAATTATATTGTTGTTATTAAAATTTTCTTTT 2814
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 ATBCGGAATBGCATTATGTTTGATATAGTAATTATATTGTTGTTATTAAAATKBTCTBTT 852
consensus_13157#0 GCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGC 2874
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 GCTGGTTTCTCTCGTGTATGGGTATGACCAAATTAAGTTAATTTATGAGAAGCGTTTTGC 912
consensus_13157#0 CATCGTCGCAATGCAAGTTCTTCGTGGTGATGTGTATGATGTACCCGTAATTGCGTATTT 2934
consensus_13157#2 ------------------------------------------------------------
consensus_13157#1 CATAAAAAAAAAAA---------------------------------------------- 926
consensus_13157#0 TAACTTTTGGAGTGAATGTCTCCTCGTTTTAAAAAA 2970
consensus_13157#2 ------------------------------------
consensus_13157#1 ------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||