These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13162#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1856 fasta sequence [TTCCAATTCTATTCTAACCCATTTATAAGCTCCTTCATTGGAGGTTAGCCCAAGGGTCAGTGTTGCTTGAGAGGTACTCACCCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGCTAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCCGGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCACCAAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTACCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAATGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACATTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAGTTAATTTGCCTAAAAAA] [+] EMBL AK060755 [TTCCAATTCTATTCTAACCCATTTATAAGCTCCTTCATTGGAGGTTAGCCCAAGGGTCAGTGTTGCTTGAGAGGTACTCACCCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGCTAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCCGGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCACCAAGAAGTTCTGCTCAAGCAAAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTGGTAGTAGATCAGTCGTCGTTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCTTCGACGGCGAGGAGGACTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACGCGTCGCGGCCACTCTACTCCGGCTTGAAGTGCTCCTTCATCTTCGACGAGGTGGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTACCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGATGATGAAAGTCATGTATGGTTCATTTGAGGACGGGGATGCAAAGTTAGATGAGGTGCAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATATTTGGAACACTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAATGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACATTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAG ] [+] EMBL OSR3396A [ CCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGCTAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCCGGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCACCAAG ] [+] EMBL AK065582 [ AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTATCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACGAGTTCTTGTATGCGTACCTCATGCACAAATGATATATGTATAATAATGTAACCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTCT GTTTTTGACATTTACAT CATTACATGTAAAGAGAAAGGGAAGAACATAATCGCAGAAATGAAAAGGAAGAAGATAAGT ] [+] EMBL CB679501 [ AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATT ] [+] EMBL OSR29841A [ GACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAG ] [+] EMBL OSR20101A [ GACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCG ] [-] EMBL CB679502 [ TGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACGAGTTCTTGTATGCGTACCTCATGCACAAATGATATATGTATAATAATGTAACCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTCT GTTTTTGACATTTACAT CATTACATGTAAAGAGAAAGGGAAGAACATAATCAAGGGAATGAAAAGGAAGAAGATAAG ] [+] EMBL AU197567 [ CGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTNTGACGAAAGAGCAGATTGCAAACCCGAGCATNTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAATGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCNCAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACATTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAGTTAATTTGCCTAAAAAA] consensusID : consensus_13162#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence [CCTTCTTTGCCAGGCTTCATTCACCTGCCCCTNTCCTTGGGCTACCTACTGGGAGAGNTGCGATCCAACAAGTGTCTACGACCAGAACCAATTCAGATAGAAGTNTTATAGGATCCAACCACAGGNTTCGGCATGATGACAAAGCGAAGGGAGATCCTGTGGGTACATTTGGAACCAAAGGCGCATACATGTTCAGATACTGAACATCACCCAGCTTTNCTGGAGTACCGCCAAGGACGCCCATCCAGACGATATTGCAGGAGNCAGTACGTTCCTCTGGACGAAAGAGCAGATTGGCAAACCCGAGCATCTGACGCAGACTGCACGCATNTGGGTGGCCTGCCCTGGGAGTTGCCTGGAGGTCTGGGAACGAGTTGCTTGTATGGCGTACCCTGCATGGCACAAATGGATGATGATGTGATGAATGAATGTGAACCTTGAATTGTGCCCCAATGTTGCTGTGCTGTTGGTTAACCTCTGTGGGGTGGTGCTAAGTGAGGGTATAAGTGCCCAGTACTTGGGCCCCCATCAATTTTTTCTGTTTTTGACATTTACATCATTACATGTAAAGAGAAAGGGAAGAACATAATCGCAGAAATGAAAAGGAAGAAGATAAGTTGATTTCCAAAAAAAAAA] [+] EMBL BI806677 [CCTTCTTTGCCAGGCTTCATTCACCTGCCCCTNTCCTTGGGCTACCTACTGGGAGAGNTGCGATCCAACAAGTGTCTACGACCAGAACCAATTCAGATAGAAGTNTTATAGGATCCAACCACAGGNTTCGGCATGATGACAAAGCGAAGGGAGATCCTGTGGGTACATTTGGAACCAAAGGCGCATACATGTTCAGATACTGAACATCACCCAGCTTTNCTGGAGTACCGCCAAGGACGCCCATCCAGACGATATTGCAGGAGNCAGTACGTTCCTCTGGACGAAAGAGCAGATTGGCAAACCCGAGCATCTGACGCAGACTGCACGCATNTGGGTGGCCTGCCCTGGGAGTTGCCTGGAGGTCTGGGAACGAGTTGCTTGTATGGCGTACCCTGCATGGCACAAATGGATGATGATGTGATGAATGAATGTGAACCTTGAATTGTGCCCCAATGTTGCTGTGCTGTTGGTTAACCTCTGTGGGGTGGTGCTAAGTGAGGGTATAAGTGCCCAGTACTTGGGCCCCCATCAATTTTTTCTGTTTTTGACATTTACATCATTACATGTAAAGAGAAAGGGAAGAACATAATCGCAGAAATGAAAAGGAAGAAGATAAGTTGATTTCCAAAAAAAAAA] consensusID : consensus_13162#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 517 fasta sequence [AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACNACTCGTCGCGGCCCTCTACTCCGGCTTGAAGTGCTCTTCATCTCGACGAAGTACCTGCGACAAGTATGAAGGAATGACCCCAGTCCACACTGGAGATGGCACCCCCGGTTCACCTCCAGATCATGCACAAGTTCTTAAACCTAGACAAAAATATTTTGTGGCAATTTTACACAATTAGGTTTAATGGTGATGGAACATATCTATGCCAAAACGATAACGACTCTATCCATATTATGATACAAATNTTGGTCCGTTGATCACCACCTTCTGTACTTCTTGCCGATTCCCTTCGCTTTCTTCCTTGATGTGTGTA] [+] EMBL CA753389 [AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACNACTCGTCGCGGCCCTCTACTCCGGCTTGAAGTGCTCTTCATCTCGACGAAGTACCTGCGACAAGTATGAAGGAATGACCCCAGTCCACACTGGAGATGGCACCCCCGGTTCACCTCCAGATCATGCACAAGTTCTTAAACCTAGACAAAAATATTTTGTGGCAATTTTACACAATTAGGTTTAATGGTGATGGAACATATCTATGCCAAAACGATAACGACTCTATCCATATTATGATACAAATNTTGGTCCGTTGATCACCACCTTCTGTACTTCTTGCCGATTCCCTTCGCTTTCTTCCTTGATGTGTGTA] consensusID : consensus_13162#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 422 fasta sequence [TCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGCCAACAACAAGTGTTTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCNCAGACTACGGCATGATGGACAAGGCGAAGGAGATATTTGGAACNCTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCNCCCAGCTTTTTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTNTGACGAAANAGCAGATTGCAAACCCGAGCATNTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTNTTGTATGCATACATTATGCCCAAATGATATATGTATAATAATGTAATNTTAATTTGGCCCAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU173505 [TCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGCCAACAACAAGTGTTTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCNCAGACTACGGCATGATGGACAAGGCGAAGGAGATATTTGGAACNCTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCNCCCAGCTTTTTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTNTGACGAAANAGCAGATTGCAAACCCGAGCATNTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTNTTGTATGCATACATTATGCCCAAATGATATATGTATAATAATGTAATNTTAATTTGGCCCAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_13162#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence [AGTCCAAGCTCTTGATAATTTCCTTTGTGTCATCCTCTCTTCAAATTCCTGTACTGTTATGAAGCATCCAAAAAACACAATTGAATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTNCAATTGCGACGATAGAATTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTTCCGGATCAT] [+] EMBL C72349 [AGTCCAAGCTCTTGATAATTTCCTTTGTGTCATCCTCTCTTCAAATTCCTGTACTGTTATGAAGCATCCAAAAAACACAATTGAATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTNCAATTGCGACGATAGAATTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTTCCGGATCAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TTCCAATTCTATTCTAACCCATTTATAAGCTCCTTCATTGGAGGTTAGCCCAAGGGTCAG 60 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TGTTGCTTGAGAGGTACTCACCCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGC 120 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAG 180 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 AGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCC 240 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 GGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTG 300 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 GGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCC 360 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 CTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCAC 420 consensus_13162#1 -------------------------------------------------CCTTCTTTGCC 11 consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 -AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATC---A 56 consensus_13162#4 ----------AGTCCAAGCTCTTGATAATTTC-----CTTTGTGTCATCCTCTCTT---C 42 consensus_13162#0 CAAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATC---A 477 consensus_13162#1 AGGCTTCATTCACCTGCCCCTNTCCTTGGGCTACCTACTGGGA--GAGNTGCGATCCAAC 69 consensus_13162#3 -----TCAT-CACCTGCCC--ATTCCTGGGCTAGCAACTGGGGAGGAGATGCCAAC-AAC 51 * * * * consensus_13162#2 GTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATC--TG 114 consensus_13162#4 AAATTCCTGTACT----GTTATGAAGCATCCAAAAAACACAATTGAATTCAATGCCACAA 98 consensus_13162#0 GTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATC--TG 535 consensus_13162#1 AAGTGTCTACG---ACCAGAACCAATTCAGATAGAAGTNTTATAGGA-TCCA-ACCACAG 124 consensus_13162#3 AAGTGTTTAAACGAAACAGAACCAATTCAGATAGAAG-ATTATAGGAGTGCA-ACCNCAG 109 * * * * * * * * * consensus_13162#2 AGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCA 174 consensus_13162#4 AGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAA 158 consensus_13162#0 AGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCA 595 consensus_13162#1 GNTTCGGCATGATG-ACAAAGCGAAGGGAGATCCTGTGGGTACATTTGGAACCAAAGGCG 183 consensus_13162#3 ACTACGGCATGATGGACAAGGCGAAGG-AGATATTTGGAACNC---TGGAACCAAAGG-G 164 * * * * * consensus_13162#2 ACTGGTCGTTGGGACGGTGGGTGTACGACNACTCGTC-GCGGCC-CTCTAC---TCCGGC 229 consensus_13162#4 ATCAATGGGTGT--CGATGG-TGTGCA------TGGT-GGAGCA-CTTCAT---CCCTGA 204 consensus_13162#0 ACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTC-GCGGCCACTTTAC---TCCGGC 651 consensus_13162#1 CATACATGTTCAGATACTGAACATCACCCAGCTTTNCTGGAGTACCGCCAAGGACGCCCA 243 consensus_13162#3 CATACATGTTCAGATACTGAACATCNCCCAGCTTTTT--GAGTACCGC-AAGGACGCCCA 221 * * ** * * * * * consensus_13162#2 TTGAAGTGCTC-TTCATCT-CGACGAAGTA-CCTGCGACAAGTATG-AAGGAA-TGAC-C 283 consensus_13162#4 TGGCCGCAAGA-TGCGCGT-TTACAACGGC-TCCCTTATCTCCTTC-AAAGCA-T----T 255 consensus_13162#0 TTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAA-TGACAC 710 consensus_13162#1 TCCAGACGATATTGCAGGAGNCAGTACGTTCCTCTGGACGAAAGAGCAGATTGGCAAACC 303 consensus_13162#3 TCCA-ACGATATT-CAGGAGACAGTACGTTCCTNTG-ACGAAANAGCAGATTG-CAAACC 277 * * * * * * * consensus_13162#2 CCAGTCC--ACACTGGAGATGGCACCCCC--GGTT-----CACCTCCAGATCA----TGC 330 consensus_13162#4 TGAGTNC--AA--TTGCGACGATAG------AATT-----CTACT---GGTCA----C-C 292 consensus_13162#0 CAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCAC 770 consensus_13162#1 CGAGCAT--CTGACGCAGACTGCACGCATNTGGGTGGCCTGCCCTGGGAGTTG----CCT 357 consensus_13162#3 CGAGCAT--NT-ACGCAGACTGCACGCATT--GGTGCC---TCCCTGGAGTT------CC 323 ** ** * * * * consensus_13162#2 ACAAGTTCTTAAAC----------CTAGACAAAAATATTTTGTG------GCAATTTTAC 374 consensus_13162#4 ACT-GCTATTGGAA----------TCAAACAGCGACAACCCC--------ATAATTC-AC 332 consensus_13162#0 AAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGG------GCGATTCAGT 824 consensus_13162#1 GGAGGTCTGGGAACGAGTTGC---TTGTATG-GCGTACCCTGCATGGC--ACAAATGGAT 411 consensus_13162#3 TGATGTTTGG-AACGAGTTN----TTGTATGCATACATTATGCCCAAATGATATATGTAT 378 * * * consensus_13162#2 ACAATTAGGTTTAATGGTGATGGAACAT-ATCTATGCCAAAACGATAACGACTCTATCCA 433 consensus_13162#4 AGAGTGGAGTTCCG-GATCAT--------------------------------------- 352 consensus_13162#0 A-AACAGAAATCAATGGGTGTCGATGGT-GTGCATGGTGGAGCACTT-CATCCCTGATGG 881 consensus_13162#1 GATGATGTGATGAATGAATGTGAACCTTGAATTGTGCCCCAATGTTGCTGTGCTGTTGGT 471 consensus_13162#3 AATAATGTAAT--NTTAATTTGGCCCAAAAAAAAAAAAAAAAAAAA-------------- 422 * * consensus_13162#2 TATTATGATACAAATNTTGGTCCGTTGA-TCACCACCTTCTGTACTTCTTGCCGATTCCC 492 consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 CCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGC 941 consensus_13162#1 TAACCTCTGTGGGGTGGTGCTAAGTGAGGGTATAAGTGCCCAGTACTTGGGCCCCCATCA 531 consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 TTCGCTTTCTTCCTTGATGTGTGTA----------------------------------- 517 consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 GACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAAT 1001 consensus_13162#1 ATTTTTTCTGTTTTTGACATTTACATCATTACATGTAAAGAGAAAGGGAAGAACATAATC 591 consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TCACAGAGTGGAGTACCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTG 1061 consensus_13162#1 GCAGAAATGAAAAGGAAGAAGATAAGTTGATTTCCAAAAAAAAAA--------------- 636 consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 GAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGG 1121 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGT 1181 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 GGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAA 1241 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGC 1301 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGAT 1361 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 AGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTT 1421 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGA 1481 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 GTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGA 1541 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 GCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCC 1601 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAA 1661 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATA 1721 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 AGTGCACAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACA 1781 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 ------------------------------------------------------------ consensus_13162#4 ------------------------------------------------------------ consensus_13162#0 TTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAGTT 1841 consensus_13162#1 ------------------------------------------------------------ consensus_13162#3 ------------------------------------------------------------ consensus_13162#2 --------------- consensus_13162#4 --------------- consensus_13162#0 AATTTGCCTAAAAAA 1856 consensus_13162#1 --------------- consensus_13162#3 --------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||