These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13166#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2492 fasta sequence [GNCGCGTGNTCCCTCTCTCTCTCTCTCTCTCTCTCGCCTCCGCCTCATCATCCTCTCCTCTCCTCTCCTCTCCCACTACCACTCCAGCGCTGCTCCCCTCGCCGTCGTCGCTGCCCTCCCCCCGATCGATCGATCGCTCCCCCTNCCGCGCCGCCGTGGCCATGGAATCCGGCCAACCCAACTCCGCCGCCGCAGCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACAAAGATACACTCAGCAGATC-TTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTT-AGCCAACAAGAAGCACCTCGACCTCTGGAACATGTTAACCTTTTGGCAGCAAGAAATGAAAGGGAAAGTTTTCAAATTGCTTTACGTCCAAAGGTATCATGGGCCACTTCTGGTATTGCGGGATCTGTGCAGGTTCAGTGCACTGATCTTTGCTCTTCCGCTGGAGACAGGTTAGTGGTTGGTCAATCTGTAACCTTGCGACGTGTGGTGCCTATGTTAGGTGTACCAGATGCTCTTGTGCCAATTGATCCACTCAATTCACAAATAAACCTGCTTCCAGGAGAGACAAGTGCAATATGGGTCTCACTAAATGTTCCTTGCGGACAACAGCCGGGTCTATATGAGGGTGAAATATTTATTAGTGCTGTGAGGGCAGAAGCAGAGTCCAGAGGAGAATCCTTGACAAAATCTGAAAGGTACCAGCTTTACAAAGAATTAAGAAATTGCATTGACATCACTGAACCCAGAGACTACTCGTCATCAGAGGAAATGGTACAAAGACTTACATCTGCTTCAACCACACTGAGGAGGATGTTAGCTCTTCCATCATTCCAGGACTGCCAAGAGAATAATGGATTAGGAGATATGATGGATGAAGATATTATGAACAATGTGGCAGTTCGTTTGAAGTTGAGCCTCACTGTTTGGGATTTTACTCTCCCACTGACACCTTCTTTACCTGCTGTTTTTGGCATATCTGAAACTGTGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTC-GAAATCTTACTTCTATTTGT-GGGATGAGCCACTGAATATGGAACAGTATGATGTAATCTGC-AGCATCTCTAATGAGTTGCGTTCATATGCATCTGATGTGCGTATTTTGACAACTTATTACTGTGGCCCAAGTGGTTCTGAACTGGCTCCTTCTACATTTGAGGCCTTTGTGAAAGTTCCAAATGTTCTACGTCCACATACGCAGATATTTTGCACAAGTGAATGGGTTCTTGGCACGAGAGAGGACTTGGTGAAGGATATTGTTGCTGAACTACGACCTGATCTTGGTGAAGAATGGTGGACATATGTGTGTATGGGGCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA-CAGG-ATTCC-TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT-GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCTCACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTATTTTATTCGTCTCGCACGGTGTCGATCCTTATTTCAGAAGGGACATTATGGTGCCCTGTCCCTTCAGAATCTGGTAGCTTTATCGCCTGATGTGGATGTCACCATGGCTATTTCAGGATCTAGCTATTATATGTTATCCTTAAAAAAAAAAA] [+] EMBL C72540 [GNCGCGTGNTCCCTCTCTCTCTCTCTCTCTCTCTCGCCTCCGCCTCATCATCCTCTCCTCTCCTCTCCTCTCCCACTACCACTCCAGCGCTGCTCCCCTCGCCGTCGTCGCTGCCCTCCCCCCGATCGATCGATCGCTCCCCCTNCCGCGCCGCCGTGGCCATGGAATCCGGCCAACCCAACTCCGCCGCC GCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACANAGATACACTCAGCAGATCTTTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTTAAGCCAACAA ] [+] EMBL AK103439 [ CCTCCGCCTCATCATCCTCTCCTCTCCTCTCCTCTCCCACTACCACTCCAGCGCTGCTCCCCTCGCCGTCGTCGCTGCCCTCCCCCCGATCGATCGATCGCTCCCCCTCCCGCGCCGCCGTGGCCATGGAATCCGGCCAACCCAACTCCGCCGCCGCAGCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACAAAGATACACTCAGCAGATC TTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTT AGCCAACAAGAAGCACCTCGACCTCTGGAACATGTTAACCTTTTGGCAGCAAGAAATGAAAGGGAAAGTTTTCAAATTGCTTTACGTCCAAAGGTATCATGGGCCACTTCTGGTATTGCGGGATCTGTGCAGGTTCAGTGCACTGATCTTTGCTCTTCCGCTGGAGACAGGTTAGTGGTTGGTCAATCTGTAACCTTGCGACGTGTGGTGCCTATGTTAGGTGTACCAGATGCTCTTGTGCCAATTGATCCACTCAATTCACAAATAAACCTGCTTCCAGGAGAGACAAGTGCAATATGGGTCTCACTAAATGTTCCTTGCGGACAACAGCCGGGTCTATATGAGGGTGAAATATTTATTAGTGCTGTGAGGGCAGAAGCAGAGTCCAGAGGAGAATCCTTGACAAAATCTGAAAGGTACCAGCTTTACAAAGAATTAAGAAATTGCATTGACATCACTGAACCCAGAGACTACTCGTCATCAGAGGAAATGGTACAAAGACTTACATCTGCTTCAACCACACTGAGGAGGATGTTAGCTCTTCCATCATTCCAGGACTGCCAAGAGAATAATGGATTAGGAGATATGATGGATGAAGATATTATGAACAATGTGGCAGTTCGTTTGAAGTTGAGCCTCACTGTTTGGGATTTTACTCTCCCACTGACACCTTCTTTACCTGCTGTTTTTGGCATATCTGAAACTGTGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTC GAAATCTTACTTCTATTTGT GGGATGAGCCACTGAATATGGAACAGTATGATGTAATCTGC AGCATCTCTAATGAGTTGCGTTCATATGCATCTGATGTGCGTATTTTGACAACTTATTACTGTGGCCCAAGTGGTTCTGAACTGGCTCCTTCTACATTTGAGGCCTTTGTGAAAGTTCCAAATGTTCTACGTCCACATACGCAGATATTTTGCACAAGTGAATGGGTTCTTGGCACGAGAGAGGACTTGGTGAAGGATATTGTTGCTGAACTACGACCTGATCTTGGTGAAGAATGGTGGACATATGTGTGTATGGGGCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCTCACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTATTTTATTCGTCTCGCACGGTGTCGATCCTTATTTCAGAAGGGACATTATGGTGCCCTGTCCCTTCAGAATCTGGTAGCTTTATCGCCTGATGTGGATGTCACCATGGCTAT ] [+] EMBL CB626677 [ CTCCGCCGCCGCAGCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACAAAGATACACTCAGCAGATC TTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTT AGCCAACAAGAAGCACCTCGACCTCTGGAACATGTTAACCTTTTGGCAGCAAGAAATGAAAGGGAAAGTTTTCAAATTGCTTTACGTCCAAAGGTATCATGGGCCACTTCTGGTATTGCAGGATCTGTGCAGGTTCAGTGCACTGATCTTTGCTCTTCCGCTGGAGACAGGTTAGTGGTTGGTCAATCTGTAACCTTGCGACGTGTGGTGCCTATGTTAGGTGTACCAGATGCTCTTGTGCCAATTGATCCACTCAATTCACAAATAAACCTGCTTCCAGGAGAGACAAGTGCAATATGGGTCTCACTAAATGTTCCTTGCGGACAACAGCCGGGTCTATATGAGGGTGAAATATTTCTTAGTGCTGTGAGGGCAGAATCAGAGTCCAGAGGAGAATCCTTGACAAAATCTGAAAGGTACCAGCTTTACAAAGAATTAAGAAATTGCATTGACATCACTGAAACCAGAGACTATTCGTCATCAGAGGAAATGGTACAAAGACTTACATCTGCTTCAACCACACTGANGAGGATGTTAGCTCTTCCATCA ] [+] EMBL CF277291 [ CACTGACACCTTCTTTACCTGCTGTTTTTGGCATATCTGAAACTGTGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTC GAAATCTTACTTCTATTTGT GGGATGAGCCACTGAATATGGAACAGTATGATGTAATCTGC AG ] [+] EMBL C25889 [ TGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTCGGAAATCTTACTTCTATTTGTNGGGATGAGCCACTGAATATGGACCAGTATGATGTAATCTGCAAGCATCTCTAATGAGTTGCGGTCATATGCATC ] [-] EMBL CB626678 [ CAGTATGATGTAATCTGC AGCATCTCTAATGAGTTGCGTTCATATGCATCTGATGTGCGTATTTTGACAACTTATTACTGTGGCCCAAGTGGTTCTGAACTGGCTCCTTCTACATTTGAGGCCTTTGTGAAAGTTCCAAATGTTCTACGTCCACATACGCAGATATTTTGCACAAGTGAATGGGTTCTTGGCACGAGAGAGGACTTGGTGAAGGATATTGTTGCTGAACTACGACCTGATCTTGGTGAAGAATGGTGGACATATGTGTGTATGGGCCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTTTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGC ] [+] EMBL AK061656 [ TGGGGCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGT ] [+] EMBL AU092157 [ GGCATCTTGGGATNCGTGGAACCCAGCACAGGGCANTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTNCCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAaaaaaaaaa ] [+] EMBL AU093993 [ GAANCAGGAATTCCTTTTATTGGGGTNCCAACTGCTACGAGAAGGCTATGATTCCAAGTGCTGGAGATTTGTTTCCGACGTGGTCTNCCTCCTGNCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCTCACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTATTTTATTCGTCTCGCACGGTGTCGATCCTTATTTCAGAAGGGACATTATGGTGCCCTGTCCCTTCAGAATCTGGTAGCTTTATCGCCTGATGTGGATGTCACCATGGCTATTTCAGGATCTAGCTATTATATGTTATCCTTAAAAAAAAAAA] [-] EMBL CF277290 [ TTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCAaaaaaaa ] [+] EMBL CA999149 [ CGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCT ] [+] EMBL BI796060 [ ATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTTTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCACACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||