|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13179#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1379 fasta sequence
[ACTGCCAACATCTGCA---AGCAGCCAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATATGAATTCGTATATGTGCAATATGATGTGATGCGAAATTAAAAATGTGTATTGGCACGTTTTGAATGATCATTAAAAAGA]
[+] EMBL AK061144 [ACTGCCAACATCTGCA AGCAG CAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGTTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATAT ]
[+] EMBL AK072761 [ TGCCAACATCTGCAAGCAGCAGCCAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATATGAATTCGTATATGTGCAATATGATGTGATGCGAAATTAAAAATGTGTATTGGCACGTT ]
[+] EMBL AU173223 [ gCAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGAC ]
[+] EMBL CB656029 [ GCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCT ]
[+] EMBL CB653640 [ AGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCCGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGC ]
[-] EMBL CB656030 [ ATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTAC ]
[-] EMBL CB653641 [ GTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGTATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAAGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATAGGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATATGAATTCGTATATGTGCAATATGATGTGATGCGAAAGTAAAAATGTGTATTGGCACGTTTTGAATGATCATTAAAAAGA]
[+] EMBL AU173224 [ GGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTNGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTTTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTTTTNGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTNATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCNCCCNACTCTTTTTGGNCTCATCTGNATTTGTTTNAATCAAAATTTTNCGTTTACTGNATTNGNTTGNATATGNCNANTTTTGTTTNTTNTAACGATGCNTTTGNATATNAAaaaaa ]
consensusID : consensus_13179#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1312 fasta sequence
[TCCACCACAACATCTCCTCCAATCAGCAGCAGCAGCAGCAGAGCTGATCACCATCACTTCGGAGCTTGTCAGCACAAGGCTAATTATTAAGCTAGGGCTCGATCGATCTGATCGTGATCTGATCTGATCTGACCATCAGCAGCCATGTCGTTTAGGTGTAAGGGCGGCGTCGCTTGGGTTGCTCTGCTCGTCGCTGTCGCGGCTCTCGCCTCCGCCGCTCAGGGATTTCCAAATCCCTTCGGTCACGAGGAGTTCACGGAGAGTTACTACGACGAGACGTGCCCCAACGCGCAGAGCATCGTGCGCTCGGTCATGGAGCGCCACGCCGCCGCCAACCCCCGCACGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTTGTCAACGGTTGTGATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTTCGACGTGATCGACGGCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGTGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACCGCCAGCATAGACATGGCCAAAGAGGATCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCAAGGAGCACGACCTCGACGAGCGTGACCTCACCGCGCTCTCCGGTGCACACACCGTCGGCATGGCACATGACTGCAAGAACTACGACGACCGCATCTACAGTCGCGTCGGCCAGGGCGGCGACAGCATCGACCCATCCTTCGCGGCGCTGCGCAGGCAGGAGTGCGAGCAGAAGCACGACAAGGCCACGGCACCGTTCGACGAGCGGACGCCAGCCAAGTTTGACAACGCCTACTACGTCGACCTGCTCGCGAGGCGGGGGCTCCTCACCTCTGACTAGGAGCTCTACACCCAGGGCTGCCAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCACAAGAGCGATGGTGAAGATGGGGAACATACGCCCAAAGCATTGGTGGACTCCGGCGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACACATTGTTGATGCTCATACTGTTGAGTACAACACAATTATGTTGCACTCATTTATAAGTGTGATATTTCCTTTCGATTTAATTGTGCATTAAACTGTAAGATGTATTTTTCTTTTGTACCTCAATTTTTTTATTCATTTTTTTATAATGTATGGGAGATCA]
[+] EMBL AK066954 [TCCACCACAACATCTCCTCCAATCAGCAGCAGCAGCAGCAGAGCTGATCACCATCACTTCGGAGCTTGTCAGCACAAGGCTAATTATTAAGCTAGGGCTCGATCGATCTGATCGTGATCTGATCTGATCTGACCATCAGCAGCCATGTCGTTTAGGTGTAAGGGCGGCGTCGCTTGGGTTGCTCTGCTCGTCGCTGTCGCGGCTCTCGCCTCCGCCGCTCAGGGATTTCCAAATCCCTTCGGTCACGAGGAGTTCACGGAGAGTTACTACGACGAGACGTGCCCCAACGCGCAGAGCATCGTGCGCTCGGTCATGGAGCGCCACGCCGCCGCCAACCCCCGCACGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTTGTCAACGGTTGTGATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTTCGACGTGATCGACGGCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGTGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACCGCCAGCATAGACATGGCCAAAGAGGATCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCAAGGAGCACGACCTCGACGAGCGTGACCTCACCGCGCTCTCCGGTGCACACACCGTCGGCATGGCACATGACTGCAAGAACTACGACGACCGCATCTACAGTCGCGTCGGCCAGGGCGGCGACAGCATCGACCCATCCTTCGCGGCGCTGCGCAGGCAGGAGTGCGAGCAGAAGCACGACAAGGCCACGGCACCGTTCGACGAGCGGACGCCAGCCAAGTTTGACAACGCCTACTACGTCGACCTGCTCGCGAGGCGGGGGCTCCTCACCTCTGACTAGGAGCTCTACACCCAGGGCTGCCAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCACAAGAGCGATGGTGAAGATGGGGAACATACGCCCAAAGCATTGGTGGACTCCGGCGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACACATTGTTGATGCTCATACTGTTGAGTACAACACAATTATGTTGCACTCATTTATAAGTGTGATATTTCCTTTCGATTTAATTGTGCATTAAACTGTAAGATGTATTTTTCTTTTGTACCTCAATTTTTTTATTCATTTTTTTATAATGTATGGGAGATCA]
[+] EMBL OSR21402A [ CTCTTCTTCCACGACTGCTTCGTCAACGGTTGTNATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGACGCCAAGCCCAACGCCTCCGTCGTCGGCTACGACGTGATCGAAGACATCAAGTCGGAACTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCTGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCGCCGCCCGCATGGACATGGNCA ]
consensusID : consensus_13179#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 436 fasta sequence
[ACGCAGGCAGGAGTGCGANNAGAAGCACGGCAACGCCACGGCGCCGTTCGATGAGCGGACGCCAGCCAAGTTCGACAACGCCTACTACGTCGACTTGCTTGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGATGTGTTCTTCGCCGACTTCGCGAGGGCCATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGTACAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATTCCTTTCGATTTGATTGTGCAATAAACTGTAAGCTGTATTATTCTTTTATAAAAAA]
[+] EMBL C20494 [ACGCAGGCAGGAGTGCGANNAGAAGCACGGCAACGCCACGGCGCCGTTCGATGAGCGGACGCCAGCCAAGTTCGACAACGCCTACTACGTCGACTTGCTTGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGATGTGTTCTTCGCCGACTTCGCGAGGGCCATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGTACAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATTCCTTTCGATTTGATTGTGCAATAAACTGTAAGCTGTATTATTCTTTTATAAAAA ]
[+] EMBL AU173346 [ ACGGCAACGCCNCGGCGCCGTTCNATGAGCGGACGCCAGCCAAGTTCGNCAACGCCTACTACGTCGACTTGCTTGNGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGGCGACCTGGTGAANACGTNCGCCATGAACGGNGATGTGTTTTTCGCCGNNTTCGCGAGGGCCATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGTACAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATTCCTTTCGATTTGATTGTGCAATAAACTGTAAGCTGTATTATTCTTTTATAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13179#1 TCCACCACAACATCTCCTCCAATCAGCAGCAGCAGCAGCAGAGCTGATCACCATCACTTC 60
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 -ACTGCCAACATCTGCAAGCAGCCAGCAGCAGCAGCAGCTCA-CCATCACTTGGGAGTTC 58
consensus_13179#1 GGAGCTTGTCAGCA----CAAGGCTAATTATTAAGCTAGGGCTCGATCGATCTGATCGTG 116
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 GGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCG 118
consensus_13179#1 ATCTGATCTGATCTGACCATCAGCAGCCATGTCGTTTAGGTGTAAGGGCGGCGTCGCTTG 176
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 TGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGT 178
consensus_13179#1 GGTTGCTCTGCTCGTCGCTGTCGCGGCTCTCGCCTCCGCCGCTCAGGGATTTCCAAATCC 236
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCC 238
consensus_13179#1 CTTCGGTCACGAGGAGTTCACGGAGAGTTACTACGACGAGACGTGCCCCAACGCGCAGAG 296
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CGTCG---------AGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAA 289
consensus_13179#1 CATCGTGCGCTCGGTCATGGAGCGCCACGCCGCCGCCAACCCCCGCACGGCGCCGGCCAT 356
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCAT 349
consensus_13179#1 CCTCCGCCTCTTCTTCCACGACTGCTTTGTCAACGGTTGTGATGCCTCCATCCTTCTGAA 416
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGA 409
consensus_13179#1 CGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTT 476
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTT 469
consensus_13179#1 CGACGTGATCGACGGCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTG 536
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTG 529
consensus_13179#1 CGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGTGGGCCCAGCTG 596
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTG 589
consensus_13179#1 GGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACCGCCAGCATAGACATGGCCAAAGAGGA 656
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 GGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCT 649
consensus_13179#1 TCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCAAGGAGCACGACCT 716
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCT 709
consensus_13179#1 CGACGAGCGTGACCTCACCGCGCTCTCCGGTGCACACACCGTCGGCATGGCACATGACTG 776
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTG 769
consensus_13179#1 CAAGAACTACGACGACCGCATCTACAGTCGCGTCGGCCAGGGCGGCGACAGCATCGACCC 836
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 CGACAACTTCGAGGGCCGCATCGACGG------CGGCGAGGGCTACGACGACATCGACCC 823
consensus_13179#1 ATCCTTCGCGGCGCTGCGCAGGCAGGAGTGCGAGCAG------AAGCACGACAAGGCCAC 890
consensus_13179#2 ---------------ACGCAGGCAGGAGTGCGANNAG------AAGCACGGCAACGCCAC 39
consensus_13179#0 GTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGG 883
* * * * * **** * * ** ** * ***
consensus_13179#1 GGCACCGTTCGACGAGCGGACGCCAGCCAAGTTTGACAACGCCTACTACGTCGACCTGCT 950
consensus_13179#2 GGCGCCGTTCGATGAGCGGACGCCAGCCAAGTTCGACAACGCCTACTACGTCGACTTGCT 99
consensus_13179#0 CGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCT 943
* ******** *********** ***** **** ******* *** ****
consensus_13179#1 CGCGAGGCGGGGGCTCCTCACCTCTGACTAGGAGCTCTACACCCAGGGCTGCCAGACCGG 1010
consensus_13179#2 TGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGG 159
consensus_13179#0 CTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGG 1003
* *** ********* * * *** *** *********** *** ** * ****
consensus_13179#1 CGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCACAAGAGC 1070
consensus_13179#2 CGACCTGGTGAAGACGTACGCCATGAACGGCGATGTGTTCTTCGCCGACTTCGCGAGGGC 219
consensus_13179#0 CGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGC 1063
*** ** *** *** *** ** *** ** * **************** * ** **
consensus_13179#1 GATGGTGAAGATGGGGAACATACGCCCAAAGCATTGGTGGACTCCGGCGGAGGTCAGGCT 1130
consensus_13179#2 CATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCT 279
consensus_13179#0 GATGGTGAAGATGGGGAACATACGCCCGGACCCTTGG---ACTCCGACGGAGGTCAGGAT 1120
***** ***************** ** * * **** ****** *********** *
consensus_13179#1 CAAGTGCTCGGTGGCCAACACACATTGTTGATGCTC------------ATACTGTTGAGT 1178
consensus_13179#2 CAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGT 339
consensus_13179#0 CAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCC-GTCATATCTCCTTTTGTTT 1179
********* ******** **** ****** * * ** * * *
consensus_13179#1 A----------CAACACAATTATGTTG--CACTCATTTATAAGTGTGATATTT---CCTT 1223
consensus_13179#2 A----------CAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATT----CCTT 385
consensus_13179#0 AAGCTTTGAGTCCACCCAACTCTTTTTG-GACTCATCTGTATTTGTCTAAATCAAAATTT 1238
* * ** *** * * ** ****** * ** *** * * **
consensus_13179#1 TCGATTTAAT-TGTGCATTAAACTGTAA-GATGTATTTTTCTTTTGTACCTCAATTTTTT 1281
consensus_13179#2 TCGATTTGAT-TGTGCAATAAACTGTAA-GCTGTATTATTCTTTTATAAAAAA------- 436
consensus_13179#0 TACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTA 1298
* *** * * * * * * * * * * ***** *
consensus_13179#1 TATTCATTTTTTTATAATGTATGGGAGATCA----------------------------- 1312
consensus_13179#2 ------------------------------------------------------------
consensus_13179#0 TATGAATTCGTATATGTGCAATATGATGTGATGCGAAATTAAAAATGTGTATTGGCACGT 1358
consensus_13179#1 ---------------------
consensus_13179#2 ---------------------
consensus_13179#0 TTTGAATGATCATTAAAAAGA 1379
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||