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Oryza sativa
cluster # 13203 cluster # 13203       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13203#0 length = 1812 sequences # 11  
consensus_13203#1 length = 545 sequences # 1  

consensusID : consensus_13203#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1812
fasta sequence
                              [GACCCTTTTGTTCCTCGAACCCACCCTCCCCCTCCCGGATTCAAACCGTCGACGCCGTCGCCGCGTGACTCTCCTCCGCGGCGGCCTGAGCCTGACCACCCCCACCCTCACTCGCCTCGTCGCCGGAAAATTGCATTCGCGCCGCTCGCCGCTCCCCCCCCCTCTTGGAGGCCCCGGAGCTAGCTGCTTGGGGGGATCCTCCTCCGCTCGGCGGGCGGCGATCTCGCGGCGGTCCCGAGGAGGTGGCGAGGTCCTGGCTGCGACGAGATGCCGTGATCCCAGCAGTGATGCGCGGATCGGAGCATGGGTGTGAGCCCTCCAGGGTGTACCTGTAGGCGGCGGGCGAGGAGCGGGAGTTGCGGCCATGGCGGTTTACATCGCTCGGGAGGCTACCAAGCTATGGAGGAAGGTGTGTGCGGAGATAGCGGTGGAGCTGCAGCTTCTTTTCGAGAAGTGGCGCTTGCTCCTTGCCGGATTGGTGTTTCAGTACATTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGACCTGGGCCACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGTTAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTTTATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTTAGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAATTATCACTGTCGGGAGGGCTCAAAAATGGCCACTCTTCCACCGCCCCATAATGTACTTGAAGTGCTCCTGATCAACTTTCCTCGTGGAGTGC-TTTTTGGTTGTGGCGATCTGATTTTTTCATCTCACATGATCTTTACACTTGTTTTCGTGCGTACATATCATAAATATGGATCCAAAAGGTTGATTAAGATTCTTGCTTGGCTGATGGCTATAATTCAGAGTCTTCTTATAATTGCTTCTCGAAAACACTACAGCGTGGATGTTGTTGTTGCTTGGTATACTGTCAATTTGGTTGTATTCTTTATTGACAATAAGCTACCAGAAATGCCAGATCGCACAAATGGATCATCTTTGCTCCCAGTTACAGCGAAAGATAAAGATGGCAGAACAAAGGAAGAGCTCCATAAACTAGAGAAGGATTGCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGCGGCAACGTGTGCAGATGAACGG-AAAACATGGCGAGGACATCAA--CCACACACTCTCAGATGCCACTCC-CAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCT-TTCACATTGACA-GGGGAATCTG-CTAGGAGACAAAGAATGCTTGGT-TTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATATGTTCACGGATGAATGAGACAGAG-CCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAAAGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCT-AGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACACTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTG-TCACATTGATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGCCGATTGGTCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071523             [GACCCTTTTGTTCCTCGAACCCACCCTCCCCCTCCCGGATTCAAACCGTCGACGCCGTCGCCGCGTGACTCTCCTCCGCGGCGGCCTGAGCCTGACCACCCCCACCCTCACTCGCCTCGTCGCCGGAAAATTGCATTCGCGCCGCTCGCCGCTCCCCCCCCCTCTTGGAGGCCCCGGAGCTAGCTGCTTGGGGGGATCCTCCTCCGCTCGGCGGGCGGCGATCTCGCGGCGGTCCCGAGGAGGTGGCGAGGTCCTGGCTGCGACGAGATGCCGTGATCCCAGCAGTGATGCGCGGATCGGAGCATGGGTGTGAGCCCTCCAGGGTGTACCTGTAGGCGGCGGGCGAGGAGCGGGAGTTGCGGCCATGGCGGTTTACATCGCTCGGGAGGCTACCAAGCTATGGAGGAAGGTGTGTGCGGAGATAGCGGTGGAGCTGCAGCTTCTTTTCGAGAAGTGGCGCTTGCTCCTTGCCGGATTGGTGTTTCAGTACATTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGACCTGGGCCACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGTTAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTTTATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTTAGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAATTATCACTGTCGGGAGGGCTCAAAAATGGCCACTCTTCCACCGCCCCATAATGTACTTGAAGTGCTCCTGATCAACTTTCCTCGTGGAGTGC TTTTTGGTTGTGGCGACCTGATTTTTTCATCTCACATGATCTTTACACTTGTTTTCGTGCGTACATATCATAAATATGGATCCAAAAGGTTGATTAAGATTCTTGCTTGGCTGATGGCTATAATTCAGAGTCTTCTTATAATTGCTTCTCGAAAACACTACAGCGTGGATGTTGTTGTTGCTTGGTATACTGTCAATTTGGTTGTATTCTTTATTGACAATAAGCTACCAGAAATGCCAGATCGCACAAATGGATCATCTTTGCTCCCAGTTACAGCGAAAGATAAAGATGGCAGAACAAAGGAAGAGCTCCATAAACTAGAGAAGGATTGCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGCGGCAACGTGTGCAGATGAACGG AAAACATGGCGAGGACATCAA  CCACACACTCTCAGATGCCACTCC CAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCT TTCACATTGACA GGGGAATCTG CTAGGAGACAAAGAATGCTTGGT TTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATATGTTCACGGATGAATGAGACAGAG CCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAAAGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCT AGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACACTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTG TCACATTGATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGCCGATT                       ]
[+] EMBL AK099114             [GACCCTTTTGTTCCTCGAACCCACCCTCCCCCTCCCGGATTCAAACCGTCGACGCCGTCGCCGCGTGACTCTCCTCCGCGGCGGCCTGAGCCTGACCACCCCCACCCTCACTCGCCTCGTCGCCGGAAAATTGCATTCGCGCCGCTCGCCGCTCCCCCCCCCTCTTGGAGGCCCCGGAGCTAGCTGCTTGGGGGGATCCTCCTCCGCTCGGCGGGCGGCGATCTCGCGGCGGTCCCGAGGAGGTGGCGAGGTCCTGGCTGCGACGAGATGCCGTGATACCAGCAGTGATGCGCGGATCGGAGCATGGGTGTGAGCCCTCCAGGGTGTACCTGTAGGCGGCGGGCGAGGAGCGGGAGTTGCGGCCATGGCGGTTTACATCGCTCGGGAGGCTACCAAGCTATGGAGGAAGGTGTGTGCGGAGATAGCGGTGGAGCTGCAGCTTCTTTTCGAGAAGTGGCGCTTGCTCCTTGCCGGATTGGTG TTCAGTACATTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGACCTGGGCCACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGTTAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTTTATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTTAGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAATTATCACTGTCGGGAGGGCTCAAAGATGGCCACTCTTCCACCGCCCCATAATGTACTTGAAGTGCTCCTGATCAACTTTCCTCGTGGAGTGC TTTTTGGTTGTGGCGATCTGATTTTTTCATCTCACATGATCTTTACACTTGTTTTCGTGCGTACATATCATAAATATGGATCCAAAAGGTTGATTAAGATTCTTGCTTGGCTGATGGCTATAATTCAGAGTCTTCTTATAATTGCTTCTCGAAAACACTACAGCGTGGATGTTGTTGTTGCTTGGTATACTGTCAATTTGGTTGTATTCTTTATTGACAATAAGCTACCAGAAATGCCAGATCGCACAAATGGATCATCTTTGCTCCCAGTTACAGCGAAAGATAAAGATGGCAGAACAAAGGAAGAGCTCCATAAACTAGAGAAGGATTGCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGCGGCAACGTGTGCAGATGAACGG AAAACATGGCGAGGACATCAA  CCACACACTCTCAGATGCCACTCC CAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCT TTCACATTGACA GGGGAATCTG CTAGGAGACAAAGAATGCTTGGT TTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATATGTTCACGGATGAATGAGACAGAG CCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAAAGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCT AGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACACTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTG TCACAT                                                                             ]
[+] EMBL OSR32651A            [                                  CCGGATTCAAACCGTCGACGCCGTCGCCGCGTGACTCTCCTCCGCGGAGGCCTGAGCCTGACCACCCCCACCCTCACTCGCCTCGTCGCCGGAAAATTGCATTCGNGCCGCTCGCCGCTCCCCCCCCCTNTTGGAGGCCCCGGAGCTAGCTGCTTGGGGGGATCCTCCTCCGCTCGGCGGGCGGCGATCTCGCGGCGGTCCCGAGGAGGTGGCGAGGTNCTGGCTNCAACGAGATGCCGTNATCCCAGCAGTNATGCGCGGATCGGAGCATGGGTGTAAGCCCTTCAGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB651383             [                                                              GCGTGACTCTCCTCCGCGGCGGCCTGAGCCTGACCACCCCCACCCTCACTCGCCTCGTCGCCGGAAAATTGCATTCGCGCCGCTCGCCGCTCCCCCCCCCTCTTGGAGGCCCCGGAGCTAGCTGCTTGGGGGGATCCTCCTCCGCTCGGCGGGCGGCGATCTCGCGGCGGTCCCGAGGAGGTGGCGAGGTCCTGGCTGCGACGAGATGCCGTGATCCCAGCAGTGATGCGCGGATCGGAGCATGGGTGTGAGCCCTCCAGGGTGTACCTGTAGGCGGCGGGCGAGGAGCGGGAGTTGCGGCCATGGCGGTTTACATCGCTCGGGAGGCTACCAAGCTATGGAGGAAGGTGTGTGCGGAGATAGCGGTGGAGCTGCAGCTTCTTTTCGAGAAGTGGCGCTTGCTCCTTGCCGGATTGGTGTTTCAGTACATTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGACCTGGGCCACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGTTAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTTTATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTTAGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAATTATCACTGTCGGGAGGGCTCAAAAATGGCCACTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF303954             [                                                                                                                                                                                                                                                                                                                                                                                                                           GTGTGCGGAGATAGCGGTGGAGCTGCAGCTTCTTTTCGAGAAGTGGCGCTTGCTCCTTGCCGGATTGGTGTTTCAGTACATTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGACCTGGGCCACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGTTAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTTTATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTTAGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAATTATCACTGTCGGGAGGGCTCAAAAATGGCCACTCTTCCACCGCCCCATAATGTACTTGAAGTGCTCCTGATCAACTTTCCTCGTGGAGTGC TTTTTGGTTGTGGCGATCTGATTTTTTCATCTCACATGATCTTTACACTTGTTTTCGTGCGTACATATCATAAATATGGATCCAAAAGGTTGATTAAGATTCTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C28578               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGNCCNGGGCCACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGTTAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTTTATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTTAGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAATTATCACTGTCGGGAGGGCTCAAAAATGGCCACTCTTCCACCGGCCCATAATGTACTTGAAGTGCTCCTGATCAACTTTCCTCGTGGAGTGCTTTTTTGGTTGTGGCGNTCTGATTTTGTNATCTCACATGATCTTTACANTTGTTTTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB651384             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATCCAAAAGGTTGATTAAGATTCTTGCTTGGCTGATGGCTATAATTCAGAGTCTTCTTATAATTGCTTCTCGAAAACACTACAGCGTGGATGTTGTTGTTGCTTGGTATACTGTCAATTTGGTTGTATTCTTTATTGACAATAAGCTACCAGAAATGCCAGATCGCACAAATGGATCATCTTTGCTCCCAGTTACAGCGAAAGATAAAGATGGCAGAACAAAGGAAGAGCTCCATAAACTAGAGAAGGATTGCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGCGGCAACGTGTGCAGATGAACGG AAAACATGGCGAGGACATCAA  CCACACACTCTCAGATGCCACTCC CAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCT TTCACATTGACA GGGGAATCTG CTAGGAGACAAAGAATGCTTGGT TTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATATGTTCACGGATGAATGAGACAGAG CCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAAAGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCT AGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACACTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTG TCACATTGATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGC                            ]
[+] EMBL AU093024             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCCAGTTACAGCGAAAGATAAAGATGGCAGACCAAAGGAAGAGCTCCAT AACTAGAGAAGGATTGCAAGGTGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGCGGCAACGTGTGCAGATGAACGG AAAACATGGCGAGGACATCAA  CCACACACTNTCAGATGCCACTCC CAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCT TTCACATTGACA GGGGAATCTG CTAGGAGACAAAGAATGCTTGGT TTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATATGTTCACGGATGAATGAGACAGAG CCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAAAGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCT AGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACACTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTG TCNCATTGATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGCCGATTGGTCAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF324148             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTAGAGAAGGATTGCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGCGGCAACGTGTGCAGATGAACGGAAAAACATGGCGAGGACATCAACCCCACACACTCTCAGATGCCACTCCNCAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCT TTCACATTGACA GGGGAATCTG CTAGGAGACAAAGAATGCTTGGT TTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATATGTTCACGGATGAATGAGACAGAG CCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAAAGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCT AGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACACTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTG TCACATTGATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATC                              ]
[+] EMBL BI807858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACATGGCGAGGACATCAA  CCACACACTCTCTGATCCCACTCC C ATGGCACATGATCAGCTGCTTTTCATCA GCGGCTTGTCTAGTTGTCTCTTCACATTGACACGGGGAATCTGCCTAGGAGACAAAGAATGCTTGGTCTTCCTCTGTATGATGACCGGCTTCTCAGGTGCCTCCGCCCCTGCATCTTGTCTGTCCGCCATGGCAATATGCTCACGGATGAATGAGACAGAGCCCAGGTGCCATAGCACCAGCATCGCTATGGACTGCAAAGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCTGAGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACACTTTCAGCTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTGCTCACATTGATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGCCGATTGGTCAAAAAAA            ]
[+] EMBL AU101670             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAAGTCTCCCAGCGANTTTTTTCAGGCTGCCATTACAGTTTTGCACCCTTGTATCGAATCTCT AGTTCTCTTCCCTCAATTTNTTAGGTTATGGAATGAACACTTTCAGGTTGATTTGNGAAGCATAGCTTCTCCCGCTGTATATATATTG TCACATTGATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGCCGATTGGTCAAAAA              ]


>consensus_13203#0 GACCCTTTTGTTCCTCGAACCCACCCTCCCCCTCCCGGATTCAAACCGTCGACGCCGTCG CCGCGTGACTCTCCTCCGCGGCGGCCTGAGCCTGACCACCCCCACCCTCACTCGCCTCGT CGCCGGAAAATTGCATTCGCGCCGCTCGCCGCTCCCCCCCCCTCTTGGAGGCCCCGGAGC TAGCTGCTTGGGGGGATCCTCCTCCGCTCGGCGGGCGGCGATCTCGCGGCGGTCCCGAGG AGGTGGCGAGGTCCTGGCTGCGACGAGATGCCGTGATCCCAGCAGTGATGCGCGGATCGG AGCATGGGTGTGAGCCCTCCAGGGTGTACCTGTAGGCGGCGGGCGAGGAGCGGGAGTTGC GGCCATGGCGGTTTACATCGCTCGGGAGGCTACCAAGCTATGGAGGAAGGTGTGTGCGGA GATAGCGGTGGAGCTGCAGCTTCTTTTCGAGAAGTGGCGCTTGCTCCTTGCCGGATTGGT GTTTCAGTACATTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGACCTGGGCC ACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGT TAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTT TATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTT AGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAA TTATCACTGTCGGGAGGGCTCAAAAATGGCCACTCTTCCACCGCCCCATAATGTACTTGA AGTGCTCCTGATCAACTTTCCTCGTGGAGTGCTTTTTGGTTGTGGCGATCTGATTTTTTC ATCTCACATGATCTTTACACTTGTTTTCGTGCGTACATATCATAAATATGGATCCAAAAG GTTGATTAAGATTCTTGCTTGGCTGATGGCTATAATTCAGAGTCTTCTTATAATTGCTTC TCGAAAACACTACAGCGTGGATGTTGTTGTTGCTTGGTATACTGTCAATTTGGTTGTATT CTTTATTGACAATAAGCTACCAGAAATGCCAGATCGCACAAATGGATCATCTTTGCTCCC AGTTACAGCGAAAGATAAAGATGGCAGAACAAAGGAAGAGCTCCATAAACTAGAGAAGGA TTGCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGA TCGGCGGCAACGTGTGCAGATGAACGGAAAACATGGCGAGGACATCAACCACACACTCTC AGATGCCACTCCCAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGT CTTTCACATTGACAGGGGAATCTGCTAGGAGACAAAGAATGCTTGGTTTCCTCTGTATGA TGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATATGTT CACGGATGAATGAGACAGAGCCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAAAGG AATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGTTTT GCACCCTTGTATCGAATCTCTAGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGAACA CTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTGTCACATTGATG AACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGCCGATTGGTCAAAAAAA AAAAAAAAAAAA



consensusID : consensus_13203#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 545
fasta sequence
                              [GCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGGTATCATAGAGCATTTATCAGCTACTCTATGTTCTATTTTAATCTCCAAATGAACTTCCCAAACTTAGAAGTTATTTTGTCATAAAATTTTCATCCAACAATGAAACATATCTACATTTCATTGTAGTTCAATTGCAACATAACCACGAGGCTTTTATCTTCTACATAGTACCTAGCAACTTATATGCAGCAACCATTTTGATATTTCCCCTAACGTACCTATTTCCGATTATCCAGCGGCAACGTGTGCAGATGAACGGAAAACATGGCGAGGACATCAACCACACACTCTCNTGATGCCACTCCCAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCTTTCACATTGACAGGGGAATCTGCTAGGAGACAAAGAATGCTTGGTTTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCAGGGCAATATGTTCACGGATGA]

[-] EMBL CB096943             [GCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGGTATCATAGAGCATTTATCAGCTACTCTATGTTCTATTTTAATCTCCAAATGAACTTCCCAAACTTAGAAGTTATTTTGTCATAAAATTTTCATCCAACAATGAAACATATCTACATTTCATTGTAGTTCAATTGCAACATAACCACGAGGCTTTTATCTTCTACATAGTACCTAGCAACTTATATGCAGCAACCATTTTGATATTTCCCCTAACGTACCTATTTCCGATTATCCAGCGGCAACGTGTGCAGATGAACGGAAAACATGGCGAGGACATCAACCACACACTCTCNTGATGCCACTCCCAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCTTTCACATTGACAGGGGAATCTGCTAGGAGACAAAGAATGCTTGGTTTCCTCTGTATGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCAGGGCAATATGTTCACGGATGA]


>consensus_13203#1 GCAAGATGAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATC GGGTATCATAGAGCATTTATCAGCTACTCTATGTTCTATTTTAATCTCCAAATGAACTTC CCAAACTTAGAAGTTATTTTGTCATAAAATTTTCATCCAACAATGAAACATATCTACATT TCATTGTAGTTCAATTGCAACATAACCACGAGGCTTTTATCTTCTACATAGTACCTAGCA ACTTATATGCAGCAACCATTTTGATATTTCCCCTAACGTACCTATTTCCGATTATCCAGC GGCAACGTGTGCAGATGAACGGAAAACATGGCGAGGACATCAACCACACACTCTCNTGAT GCCACTCCCAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGTTGTCTTT CACATTGACAGGGGAATCTGCTAGGAGACAAAGAATGCTTGGTTTCCTCTGTATGATGAC TGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCAGGGCAATATGTTCACG GATGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13203#0      GACCCTTTTGTTCCTCGAACCCACCCTCCCCCTCCCGGATTCAAACCGTCGACGCCGTCG 60
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      CCGCGTGACTCTCCTCCGCGGCGGCCTGAGCCTGACCACCCCCACCCTCACTCGCCTCGT 120
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      CGCCGGAAAATTGCATTCGCGCCGCTCGCCGCTCCCCCCCCCTCTTGGAGGCCCCGGAGC 180
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      TAGCTGCTTGGGGGGATCCTCCTCCGCTCGGCGGGCGGCGATCTCGCGGCGGTCCCGAGG 240
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      AGGTGGCGAGGTCCTGGCTGCGACGAGATGCCGTGATCCCAGCAGTGATGCGCGGATCGG 300
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      AGCATGGGTGTGAGCCCTCCAGGGTGTACCTGTAGGCGGCGGGCGAGGAGCGGGAGTTGC 360
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      GGCCATGGCGGTTTACATCGCTCGGGAGGCTACCAAGCTATGGAGGAAGGTGTGTGCGGA 420
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      GATAGCGGTGGAGCTGCAGCTTCTTTTCGAGAAGTGGCGCTTGCTCCTTGCCGGATTGGT 480
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      GTTTCAGTACATTCATGGACTGGCTGCTCGAGGAGTACATTACTTGCATCGACCTGGGCC 540
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      ACTGCTCCAGGACTTGGGATTCATGGCTCTTCCGGAACTTGGACAGGACAAAGGATATGT 600
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      TAGTGAGAGCGTGTTCACATTCATCTTCATTTCCTTCCTGTTGTGGAGTTTTCACCCTTT 660
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      TATTTATCATAGCAAACGTTTCTACACTGTTCTACTCTGGCGCAGGGTGCTGGCCTTTTT 720
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      AGTTGCTTCACAATTTTTGCGGATTATTACTTTCTATTCCACTCAGCTCCCAGGTCCAAA 780
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      TTATCACTGTCGGGAGGGCTCAAAAATGGCCACTCTTCCACCGCCCCATAATGTACTTGA 840
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      AGTGCTCCTGATCAACTTTCCTCGTGGAGTGCTTTTTGGTTGTGGCGATCTGATTTTTTC 900
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      ATCTCACATGATCTTTACACTTGTTTTCGTGCGTACATATCATAAATATGGATCCAAAAG 960
consensus_13203#1      -----------------------------------------------------GCAAGAT 7
                                                                             *** * 

consensus_13203#0      GTTGATTAAGATTCTTGCTTGGCTGA-TGGCTATAATTCAGAGTCTTCTTATAATTGCTT 1019
consensus_13203#1      GAAGGAAGAGTTCCATAAATTGTTAAATGGAAACACTGTCGATTCTACTGATCGGGTATC 67
                       *  *    ** * * *   * * * * ***  * * *   ** *** ** **      * 

consensus_13203#0      CTCGAAAACACTACAGCGTGGATGTTGTTGTTGCTTGGTATACTGTCAATTTGGTTGTAT 1079
consensus_13203#1      ATAGAGCATTTATCAGC-TACTCTATGTTCTATTTTAATCTCCAAATGAACTTCCCAAAC 126
                        * **  *     **** *      **** *   **  * * *     *  *      * 

consensus_13203#0      TCTTTATTGACAATAAGCTACCAGAAATGCCAGATCGCACAAATGGATCATCTTTGCTCC 1139
consensus_13203#1      T-----TAGAAGTTATTTTGTCATAAAATTTTCATC-CAACAATGAAACATATCTACATT 180
                       *     * **   **   *  ** ***      *** **  **** * *** * * *   

consensus_13203#0      CAGTTACAGCGAAAGATAAAGATGGCAGAACAAAGGAAGAGCTCCATAAACTAGAGAAGG 1199
consensus_13203#1      TCATTGTAGTTCAATTGCAACATAACCACGAGGCTTTTATCTTCTACATAGTACCTAGCA 240
                          **  **   **    ** **  *                ** * * * **   *   

consensus_13203#0      ATTGCAAGATGAAGGAAGAGTTCC-ATAAATTGTTAAATGGAAACACTGTCGATTCTACT 1258
consensus_13203#1      ACTT--ATATGCAGCAACCATTTTGATATTTCCCCTAACGTACCTATTTCCGATTAT--- 295
                       * *   * *** ** **   **   ***  *     ** * *   * *  ***** *   

consensus_13203#0      GATCGGCGGCAACGTGTGCAGATGAACGGAAAACATGGCGAGGACATCAACCACACACTC 1318
consensus_13203#1      --CCAGCGGCAACGTGTGCAGATGAACGGAAAACATGGCGAGGACATCAACCACACACTC 353
                          * *******************************************************

consensus_13203#0      TCA-GATGCCACTCCCAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGT 1377
consensus_13203#1      TCNTGATGCCACTCCCAATGGCACATGATCAGCTGCTTTTCATCAGGCGGCTTGTCTAGT 413
                       **  ********************************************************

consensus_13203#0      TGTCTTTCACATTGACAGGGGAATCTGCTAGGAGACAAAGAATGCTTGGTTTCCTCTGTA 1437
consensus_13203#1      TGTCTTTCACATTGACAGGGGAATCTGCTAGGAGACAAAGAATGCTTGGTTTCCTCTGTA 473
                       ************************************************************

consensus_13203#0      TGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCATGGCAATAT 1497
consensus_13203#1      TGATGACTGGCTTCTCAGGTGCCTCTGCCCCTGCATTTTGTCTGTCCGCCAGGGCAATAT 533
                       *************************************************** ********

consensus_13203#0      GTTCACGGATGAATGAGACAGAGCCAGGTGCCATAGCACCAGCATTGCTATGGACTGCAA 1557
consensus_13203#1      GTTCACGGATGA------------------------------------------------ 545
                       ************                                                

consensus_13203#0      AGGAATCAGAGTCTCAACTCTCAAGTCTCCCAGCGACTTTTCTCAGGCTGCCATTACAGT 1617
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      TTTGCACCCTTGTATCGAATCTCTAGTTCTCTTCCCTCAATTTCTTAGGTTATGGAATGA 1677
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      ACACTTTCAGGTTGATTTGAGAAGCATAGCTTCTCCCGCTGTATATATATTGTCACATTG 1737
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      ATGAACTTAGCTTAATCTTGGCATGGATATACTCATATATCTATCGCCGATTGGTCAAAA 1797
consensus_13203#1      ------------------------------------------------------------
                                                                                   

consensus_13203#0      AAAAAAAAAAAAAAA 1812
consensus_13203#1      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)