These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13212#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1795 fasta sequence [TTTTTTTTTTTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC-AGATTCACA-GTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGATCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT-CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA-GAACTTGGAGCTTT-CCCCATAATCGACACTTC-TCACATCC-AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT-AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG-CCTGCTCAAGGTAATCTGCTGCCTTTGTCACAGCCCGAAGAAC-AACAGGTAAGTGAAGTACAAATTTTGTACACGCTCGGGGTACTT-AGAACACGGTCATCCA-CCAAGGAGGA-TATGT-TCCACAAGGTGGCAGATTCATCTAGAAGATAATCATAAGCAATGTGTACTGAAATTGAGGAGTGCAACCCTGAAATTAGCTTGTACAGTGCCTTCTTCTCCTGACACATTTCTTCAGACGGATATTTTGGACAGTTTTCTTTGTAGACAGAGTCCCATATTCTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATAAGTCATCTCAGCATTATCAGTCTCATCGTCATATGTCCATGGATTGTCGGTTTCAATCCATCCTTTGAAAACCTTGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTGTAAGGCTTCTTGAATGGCTCAGGAAACTCATTCTCTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCCTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCACGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCGAGCTGACGGCGACGGCGAGGAGCGCCACGAGCAGCGCCCCCACCCCCGCGGCCGCCGCCCACCGACCCCGCTTCCGGCGCTTGCCTCCCGCCGCAGCCGCCGCGGCGGCGGGGGCGGGGGCAGGGGCGGCACCGTTCGCCGCGGGAGCGGGCTCCTGAGGAGGCATCCCGCCTCCGCCCTGGAGTGGAAGGTTATAGAAGCGAG] [+] EMBL CF307348 [TTTTTTTTTTTTTTTTTTTTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGATCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAA ] [+] EMBL CB654132 [ tccTTTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGATCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGA ] [+] EMBL CF330735 [ TTTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACA ] [-] EMBL CF330736 [ TTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACA ] [+] EMBL CB624072 [ AAAAGCTTTTGCTTGTCAGCAATATGATCACAAGATTCACAGGTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGCTCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTCCACGATTCAGATAGGAAACACCGGTTTCACAGTAAAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCAAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG CCTGTTCAAGGTAAT ] [+] EMBL BE040220 [ CATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGCTCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTCCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCAAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCANGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTTGAAAGCATTTGCTTCACTAAAAGACTGTG TTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAGCCCTG TCAAGGTAGTCTGCTGCCTTTGTCACAGCCCGAAGAAC AACCGGTAAGTGGAGGACAAATTTTGGACACGCTCGGGGTACTT ACGACCCGGTCATCCA CCAAGGAGGA TATGT TCCACAAGG ] [-] EMBL CA998869 [ AATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG CCTGCTCAAGGTAATCTGCTGCCTTTGTCACAGCCCGAAGAACAAACAGGTAAGTGAAGTACAAATTTTGTACACGCTCGGGGTACTTCAGAACACGGTCAT ] [-] EMBL AA750002 [ aTCAGATAG AACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCATCCAACAGAGAAAAGAATCTTCAATGCAGTACCAAGACCAAGGAACc ] [-] EMBL CF310787 [ TGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA GAACTTGGAGCTTTCCCCCATAATCGACACTTCTTCACATCCAAACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG CCTGCTCAAGGTAATCTGCTGCCTTTGTCACAGCCCGAAGAACAAACAGGTAAGTGAAGTACAAATTTTGTACACGCTCGGGGTACTTCAGAACACGGTCATACAGCAAAGGAAGATTATGTCCCCACAAGTTGGCAGATTCATCTAGAAGATAATCATAAGCAATGTGTACTGAAATTGAGGAGTGCAACCCTGAAATTAGCTTGTACAGTGCCTTCTTCTCCTGACACATTTCTTCAGACGGATATTTTGGACAGTTTTCTTTGTAGACAGAGTCCCATATTCTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATA ] [-] EMBL CB624071 [ TCCCATATTCTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATAAGTCATCTCAGCATTATCAGTCTCATCGTCATATGTCCATGGATTGTCGGTTTCAATCCATCCTTTGAAAACCTTGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTATAAGGCTTCTTGAATGGCTCAGGAAACTCATTCTCTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCCTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCGCGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCGAGCTGACGGCGACGGCGAGGAGCGCCACGAGCAGCGCCCCCACCCCCGCGGCCGCCGCCCACCGACCCCGCTTCCGGCGCTTGCCTCCCGCCGCAGCCGCCGCGGCGGCGGGGGCGGGGGCAGGGGCGGCACCGTTCGCCGCGGGAGCGGGCTCCTGAGGAGGCATCCCGCCTCCGCCCTGGAGTGGAAGGTTATAGAAGCG ] [-] EMBL CB654131 [ taTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATAAGTCATGTCAGCATTATCAGTCTCATCGTCATATGTCCACGGATTGTCGGTCTCAATCCATCCTTTGAAAACCTTGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTGTAAGGCTTCTAGAATGGCTCAGGAAACTCATTCTGTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCTTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCACGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCGAGCTGTCGGCGACGGCGAGGAGCGCCACGAGCAGCGCCCCCACCCCCGCGGCCGCCGCCCACCGACCCCGCTTCCGGCGCTTGCCTCCCGCCGCAGCCGCCGCGGCGGCGGGGGCGGGGGCAGGGGCGGCGCCGTTCGCCGCGGGAGCGGGCTCCTGAGGAGGCATCCCGCCTCCGCCCTGGAGTGGAAGGTTCTAGAAGCGAG] [-] EMBL CB652669 [ GTGTAACGTTCAGGGTGGAGTTGAAGATTCACATAAGTCATCTCAGCATTATCAGTCTCATCGTCATATGTCCATGGATTGTCGGTTTCAATCCATCCTTTGAAAACCTGGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTGTAAGGCTTCTTGAATGGCTCAGGAAACTCATTCTCTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCCTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCACGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||