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Oryza sativa
cluster # 13216 cluster # 13216       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13216#0 length = 1824 sequences # 8  
consensus_13216#1 length = 548 sequences # 2  
consensus_13216#2 length = 358 sequences # 2  

consensusID : consensus_13216#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1824
fasta sequence
                              [AGGTGTCGGCGGCGCAGGCGGTGGGTGTCGGCGGCGCNGGGACGAGCGGCAGGTTTCGGCGGCGGCGCGGGCGGCGACTCCAGGCGNNCCCTTCCTCGTACCCCCGATCTCGGAAAAGAGGATTATAAGGTAAAAGCACACACAAATCTAACACCACTACAGCGATAAACCCCCCAAACCCCACCACCACGCCGCCGCCGCCGCCGCCGCCGGAGAAGATGATGGTGCCGCTGGATCCGTCATCCAAGCCCACCTCCCAGCGCCGCATCGCGAGGGGGACANGTCGTGGTGTACGAGCGCCACGACGCCATGCGCGCCGTCGCCGTGCTTCCCGGGGGCCGTGCTCCAGAACCGATTCGGCGTCTTCCGCCACGACGACTGGATNGGACGCCCCTTCGGCTGCAAGGTCCACAGCGCCGCCTCCGCCGGCGGCGGAGGGGCTCGCGGGGGCAAGGGGAAAGGCGGCGGGTTCGTCCACCTCCTTGCGCCCACCCCTGAGCTGTGGACGCTCGTGCTCAGCCACCGGACGCAGATCCTCTACCTCGCCGACATCAGCCTCGTCGTCTCCTACCTCGAGCTCGTCCCCGGGTGCCTCGTGCTCGAGTCCGGCACCGGGAGCGGCTCCCTCACCACCTCGCTCGCCCGCGCCGTCGCCCCGCACGGCCGCGTCTGCACCTTCGATTTCCACGACCAGAGGGCCGCCTCCGCAAGGGAAGATTTTGAGAGGAATGGCCTGACCAGCATAATCACAGTCGCAGTTCGGGACATACAAGGACAAGGGTTCCCTGAGGAACACACTGGTGCTGCCGATGCTGTGTTCTTGGACTTACCCCAGCCTTGGCTTGCAATACCTTCTGCGGGGACTATGCTAAAGCAAGATGGAGTTTTATGCTCCTTCTCACCCTGCATTGAGCAAGTGCAGCGGGCTTGC-GAAGCTATGAGATCATGTTTCACAGATATTAGAACCTTTGAAATTCTTCTTCGCACCTATGAAGTACGAGAAGGTGGTTTGAAGGGTGCCACAACCAATGAAGAGTCTAATGCAGTGCCTCTTGCTCAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAACTTTAGATGTTAAGCAGAATTCTTCTA-GTGTT-ATGGTTAGGCCTTGTAGCA-CT-GCTAGAGGACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAAC-CCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATAC-TGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTAC-GTCGAGCTGTGGG-CC-TTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCACGTCTCCATG-CCTTGCGCA-AAAAAGAATTCAAATATCTATCTTTTTAAAAAAAAAGGTTTTGACAGGATGCCGAAAAAAGGTGTGGTATGTTTCTGTTTGATTGATTAGCACCGCCTAACCTCTTTTTCCTAAACCATGTAATACAGTTAATTCAAGTCCTATCGGATGAAACAAATCAACCAGATCGGTGATTTGTATGTATGTACTTAGACAAAGTCAAATAAGAGA]

[+] EMBL AU091740             [AGGTGTCGGCGGCGCAGGCGGTGGGTGTCGGCGGCGCNGGGACGAGCGGCAGGTTTCGGCGGCGGCGCGGGCGGCGACTCCAGGCGNNCCCTTCCTCGTACCCCCGATCTCGGAAAAGAGGATTATAAGGTAAAAGCACACACAAATCTAACACCACTACAGCGATAAACCCCCCAAACCCCACCACCACGCCGCCGCCGCCGCCGCCGCCGGAGAAGATGATGGTGCCGCTGGATCCGTCATCCAAGCCCACCTCCCAGCGCCGCATCGCGAGGGGGACANGTCGTGGTGTACGAGCGCCACGACGCCATGCGCGCCGTCGCCGTGCTTCCCGGGGGCCGTGCTCCAGAACCGATTCGGCGTCTTCCGCCACGACGACTGGATNGGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB647413             [                                                                                                                                                                                                                                                                                                                                                      GCTCCAGAACCGATTCGGCGTCTTCCGCCACGACGACTGGATCGGCCGCCCCTTCGGCTGCAAGGTCCACAGCGCCGCCTCCGCCGGCGGCGGAGGGGCTCGCGGGGGCAAGGGGAAAGGCGGCGGGTTCGTCCACCTCCTTGCGCCCACCCCTGAGCTGTGGACGCTCGTGCTCAGCCACCGGACGCAGATCCTCTACCTCGCCGACATCAGCCTCGTCGTCTCCTACCTCGAGCTCGTCCCCGGGTGCCTCGTGCTCGAGTCCGGCACCGGGAGCGGCTCCCTCACCACCTCGCTCGCCCGCGCCGTCGCCCCGCACGGCCGCGTCTGCACCTTCGATTTCCACGACCAGAGGGCCGCCTCCGCAAGGGAAGATTTTGAGAGGAATGGCCTGACCAGCATAATCACAGTCGCAGTTCGGGACATACAAGGACAAGGGTTCCCTGAGGAACACACTGGTGCTGCCGATGCTGTGTTCTTGGACTTACCCCAGCCTTGGCTTGCAATACCTTCTGCGGGGACTATGCTAAAGCAAGATGGAGTTTTATGCTCCTTCTCACCCTGCATTGAGCAAGTGCAGCGGGCTTGC GAAGCTATGAGATCATGTTTCACAGATATTAGAACCTTTGAAATTCTTCTTCGCACCTATGAAGTACGAGAAGGTGGTTTGAAGGGTGCCACAACCAATGAAGAGTCTAATGCAGTGCCTCTTGCTCAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAACTTTAGATGTTAAGCAGAATTCTTCTA GTGTT ATGGTTAGGCCTTGTAGCA CT GCTAGAAGACACACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB642401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGGGC TGCGGAAGCTATGAGATCATGTTTCACAGATATTAGAACCTTTGAAATTCTTCTTCGCACCTATGAAGTACGAGAAGGTGGTTTGAAGGGTGCCACAACCAATGAAGAGTCTAATGCAGTGCCTCTTGCTCAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAACTTTAGATGTTAAGCAGAATTCTTCTA GTGTT ATGGTTAGGCCTTGTAGCA CT GCTAGAGGACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAAC CCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATAC TGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTAC GTCGAGCTGTGGG CC TTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCACGTCTCCATG CCTTGGGGA AAAAAGAATTCAAATATCTATCTTTTTAAAAAAAAAG                                                                                                                                                                             ]
[+] EMBL BI809895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAGATGTTAACCAGAA   TTCTA GTGTT AT GTTA GCCTTGTA CA CT GCTAGAGGACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGTGGACTCACACCTTCATAATAGAAGGAAATTGAGTGTGCAAC CCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATAC TGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTAC GTCGAGCTGTGGG CC TTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAAGTATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGCCAAGTGGGCTGGGCATGTTTGGATTTCACGTTTCCATG CCTTGC CAGAAAAGGAAT                                                                                                                                                                                                         ]
[+] EMBL BM420065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAATTCTTCTA GTGTT ATGGTTA GCCTTGTAGCA CT GCTAGAGGACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAACACCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATACATGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTACAGTCGAGCTGTGGGACCATTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGA GTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCAa                                                                                                                                                                                                                                      ]
[-] EMBL CB647414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAATTCTTCTA GTGTT ATGGTTAGGCCTTGTAGCA CT GCTAGAGGACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAAC CCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATAC TGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTAC GTCGAGCTGTGGG CC TTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCACGTCTCCATG CCTTGCGCA AAAAAGAATTCAAATATCTATCTTTTTTAACAAATGTGTTTTGACAGGATGCCGAAAAAAGGTGTGGTATGTTTCTGTTTGATTGATTAGCACCGCCTAACCTCTTTTTCCTAAACCATGTAATACAGTTAATTCAAGTCCTATCGGATGAAACAAATCAACCAGATCGGTGATTTGTATGTATGTACTTAGACAAAGTCAAATAAGAGA]
[+] EMBL BM422105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCTAGGTGTTAATGGTTAGCCCTTGTAGCACCTGGCTAGAGGACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAAC CCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATAC TGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTAC GTCGAGCTGTGGG CC TTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCACGTCTCCATGCCCTTGCGCA AAAAAGAAct                                                                                                                                                                                                        ]
[+] EMBL C96664               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGCAAC CCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATAC TGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTAC GTCGAGCTGTGGG CC TTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCACGTCTCCATG CCTTGCGCA AAAAAGAAT                                                                                                                                                                                                         ]


>consensus_13216#0 AGGTGTCGGCGGCGCAGGCGGTGGGTGTCGGCGGCGCNGGGACGAGCGGCAGGTTTCGGC GGCGGCGCGGGCGGCGACTCCAGGCGNNCCCTTCCTCGTACCCCCGATCTCGGAAAAGAG GATTATAAGGTAAAAGCACACACAAATCTAACACCACTACAGCGATAAACCCCCCAAACC CCACCACCACGCCGCCGCCGCCGCCGCCGCCGGAGAAGATGATGGTGCCGCTGGATCCGT CATCCAAGCCCACCTCCCAGCGCCGCATCGCGAGGGGGACANGTCGTGGTGTACGAGCGC CACGACGCCATGCGCGCCGTCGCCGTGCTTCCCGGGGGCCGTGCTCCAGAACCGATTCGG CGTCTTCCGCCACGACGACTGGATNGGACGCCCCTTCGGCTGCAAGGTCCACAGCGCCGC CTCCGCCGGCGGCGGAGGGGCTCGCGGGGGCAAGGGGAAAGGCGGCGGGTTCGTCCACCT CCTTGCGCCCACCCCTGAGCTGTGGACGCTCGTGCTCAGCCACCGGACGCAGATCCTCTA CCTCGCCGACATCAGCCTCGTCGTCTCCTACCTCGAGCTCGTCCCCGGGTGCCTCGTGCT CGAGTCCGGCACCGGGAGCGGCTCCCTCACCACCTCGCTCGCCCGCGCCGTCGCCCCGCA CGGCCGCGTCTGCACCTTCGATTTCCACGACCAGAGGGCCGCCTCCGCAAGGGAAGATTT TGAGAGGAATGGCCTGACCAGCATAATCACAGTCGCAGTTCGGGACATACAAGGACAAGG GTTCCCTGAGGAACACACTGGTGCTGCCGATGCTGTGTTCTTGGACTTACCCCAGCCTTG GCTTGCAATACCTTCTGCGGGGACTATGCTAAAGCAAGATGGAGTTTTATGCTCCTTCTC ACCCTGCATTGAGCAAGTGCAGCGGGCTTGCGAAGCTATGAGATCATGTTTCACAGATAT TAGAACCTTTGAAATTCTTCTTCGCACCTATGAAGTACGAGAAGGTGGTTTGAAGGGTGC CACAACCAATGAAGAGTCTAATGCAGTGCCTCTTGCTCAGAAAAAAAGAAAACTTCTTGC TGCTGCAGAAACTTTAGATGTTAAGCAGAATTCTTCTAGTGTTATGGTTAGGCCTTGTAG CACTGCTAGAGGACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTA AACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGA GTGTGCAACCCCATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTT CTGAAATACTGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTAC TGAACTGCATTTACCTGTACGTCGAGCTGTGGGCCTTGCATTTGTTGTAATGGTGTAGAA GTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGG AGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTA ACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCACGTCTCCATGCCTTGCGCAAAAAAG AATTCAAATATCTATCTTTTTAAAAAAAAAGGTTTTGACAGGATGCCGAAAAAAGGTGTG GTATGTTTCTGTTTGATTGATTAGCACCGCCTAACCTCTTTTTCCTAAACCATGTAATAC AGTTAATTCAAGTCCTATCGGATGAAACAAATCAACCAGATCGGTGATTTGTATGTATGT ACTTAGACAAAGTCAAATAAGAGA



consensusID : consensus_13216#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 548
fasta sequence
                              [AGAGTCTAATCCAGTCCCTCTGCTCAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAACTTTAGATGTTAAGCAGAATTCTTCTAGTGTTATGGTTAGGCCTTGTAGCACTGCTAGAGGACACACCTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAACCCCATGTTCAGGTATTCTCTCAAGGATTGATTTGGAGATGATCATTCTTTTTCTGAAATACTGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTACGTCGAGCTGTGGGCCTTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCCAAAAAAAAAA]

[+] EMBL BI811440             [AGAGTCTAATCCAGTCCCTCTGCTCAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAACTTTAGATGTTAAGCAGAATTCTTCTAGTGTTATGGTTAGGCCTTGTAGCACTGCTAGAGGACACACCTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAACCCCATGTTCAGGTATTCTCTCAAGGATTGATTTGGAGATGATCATTCTTTTTCTGAAATACTGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATTTACCTGTACGTCGAGCTGTGGGCCTTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCCAAAAAAAAAA]
[+] EMBL AU029693             [                                                                                                                                                                                                                                                                                                                                                               AACTGCATTTACCTGTNCGTCGAGCTGTGGNCCTTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAAaaaaaaa           ]


>consensus_13216#1 AGAGTCTAATCCAGTCCCTCTGCTCAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAACT TTAGATGTTAAGCAGAATTCTTCTAGTGTTATGGTTAGGCCTTGTAGCACTGCTAGAGGA CACACCTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTCC ATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAACCCC ATGTTCAGGTATTCTCTCAAGGATTGATTTGGAGATGATCATTCTTTTTCTGAAATACTG TTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATT TACCTGTACGTCGAGCTGTGGGCCTTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAG AGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGA GGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCCAA AAAAAAAA



consensusID : consensus_13216#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 358
fasta sequence
                              [AGTGCCAAACCCTACCTCTCCTCCCTCCTCTGTTTCGGCGGCGCACCAGGCGGCGTGGAGGGCGGACTGGTAGGCGGTGCCGGGCCGGGGGTGGTTCGGCGGAGGGGTGGCGGCGCCGGGGACGAGCGGCCGGTTTCGGCGGCGGGGCGGGCGGCAGGTNTCGGCGGCGCAGGCGGTGGGTNTCGGCGGCGCGGGCGCTGTCTCCTGGCGGCGCGGGCNGCGACTCCAGGCGANCCCTTCCTCGTACCCCCGATCTCGGAAAAGAGGATTATAAGGTAAAAGCACACACAAATCTAACACCACTACAGCGATAAACCCCCAAACCCACCAACACGCTGCTGCGGCTGCGCCGCCGGAA]

[+] EMBL OSC111481            [AGTGCCAAACCCTACCTCTCCTCCCTCCTCTGTTTCGGCGGCGCACCAGGCGGCGTGGAGGGCGGACTGGTAGGCGGTGCCGGGCCGGGGGTGGTTCGGCGGAGGGGTGGCGGCGCCGGGGACGAGCGGCCGGTTTCGGCGGCGGGGCGGGCGGCAGGTNTCGGCGGCGCAGGCGGTGGGTN                                                                                                                                                                                ]
[+] EMBL C91705               [                                  cCGGCGGCGCACCAGGCGGCGTGGAGGGCGGACTGGTAGGCGGTNCNGGGCCGGGGGTGGTTCGGCGGACGGGTGGCGGCG CGGGGACGAGCGGCAGGTTTCGGCGGCGGGGCGGGCGGCAGGTGTNGGCGGCGCAGGCGGTGGGTGTCGGCGGCGCGGGCGCTGTCTCCTGGCGGCGCGGGCNGCGACTCCAGGCGANCCCTTCCTCGTACCCCCGATCTCGGAAAAGAGGATTATAAGGTAAAAGCACACACAAATCTAACACCACTACAGCGATAAACCCCCAAACCCACCAACACGCTGCTGCGGCTGCGCCGCCGGAA]


>consensus_13216#2 AGTGCCAAACCCTACCTCTCCTCCCTCCTCTGTTTCGGCGGCGCACCAGGCGGCGTGGAG GGCGGACTGGTAGGCGGTGCCGGGCCGGGGGTGGTTCGGCGGAGGGGTGGCGGCGCCGGG GACGAGCGGCCGGTTTCGGCGGCGGGGCGGGCGGCAGGTNTCGGCGGCGCAGGCGGTGGG TNTCGGCGGCGCGGGCGCTGTCTCCTGGCGGCGCGGGCNGCGACTCCAGGCGANCCCTTC CTCGTACCCCCGATCTCGGAAAAGAGGATTATAAGGTAAAAGCACACACAAATCTAACAC CACTACAGCGATAAACCCCCAAACCCACCAACACGCTGCTGCGGCTGCGCCGCCGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13216#0      AGGTGTCGGCGGCGCAGGCGGTGGGTGTCGGCGGCGCNGGGACGAGCGGCAGGTTTCGGC 60
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      GGCGGCGCGGGCGGCGACTCCAGGCGNNCCCTTCCTCGTACCCCCGATCTCGGAAAAGAG 120
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      GATTATAAGGTAAAAGCACACACAAATCTAACACCACTACAGCGATAAACCCCCCAAACC 180
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CCACCACCACGCCGCCGCCGCCGCCGCCGCCGGAGAAGATGATGGTGCCGCTGGATCCGT 240
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CATCCAAGCCCACCTCCCAGCGCCGCATCGCGAGGGGGACANGTCGTGGTGTACGAGCGC 300
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CACGACGCCATGCGCGCCGTCGCCGTGCTTCCCGGGGGCCGTGCTCCAGAACCGATTCGG 360
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CGTCTTCCGCCACGACGACTGGATNGGACGCCCCTTCGGCTGCAAGGTCCACAGCGCCGC 420
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CTCCGCCGGCGGCGGAGGGGCTCGCGGGGGCAAGGGGAAAGGCGGCGGGTTCGTCCACCT 480
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CCTTGCGCCCACCCCTGAGCTGTGGACGCTCGTGCTCAGCCACCGGACGCAGATCCTCTA 540
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CCTCGCCGACATCAGCCTCGTCGTCTCCTACCTCGAGCTCGTCCCCGGGTGCCTCGTGCT 600
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CGAGTCCGGCACCGGGAGCGGCTCCCTCACCACCTCGCTCGCCCGCGCCGTCGCCCCGCA 660
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CGGCCGCGTCTGCACCTTCGATTTCCACGACCAGAGGGCCGCCTCCGCAAGGGAAGATTT 720
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      TGAGAGGAATGGCCTGACCAGCATAATCACAGTCGCAGTTCGGGACATACAAGGACAAGG 780
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      GTTCCCTGAGGAACACACTGGTGCTGCCGATGCTGTGTTCTTGGACTTACCCCAGCCTTG 840
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      GCTTGCAATACCTTCTGCGGGGACTATGCTAAAGCAAGATGGAGTTTTATGCTCCTTCTC 900
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      ACCCTGCATTGAGCAAGTGCAGCGGGCTTGCGAAGCTATGAGATCATGTTTCACAGATAT 960
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      TAGAACCTTTGAAATTCTTCTTCGCACCTATGAAGTACGAGAAGGTGGTTTGAAGGGTGC 1020
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      CACAACCAATGAAGAGTCTAATGCAGTGCCTCTTGCTCAGAAAAAAAGAAAACTTCTTGC 1080
consensus_13216#1      ------------AGAGTCTAATCCAGTCCCTCT-GCTCAGAAAAAAAGAAAACTTCTTGC 47
consensus_13216#2      ------------AGTGCCAAACCCTACCTCTCCTCCCTCCTCTGTTTCGGCGGCGCACCA 48
                                   ** * * **  *     ***   *                   *    

consensus_13216#0      TGCTGCAGAAACTTTAGA-TGTTAAGCAGAATTCTTCTAGTGTTATGGTTAGGCCTTGTA 1139
consensus_13216#1      TGCTGCAGAAACTTTAGA-TGTTAAGCAGAATTCTTCTAGTGTTATGGTTAGGCCTTGTA 106
consensus_13216#2      GGCGGCGTGGAGGGCGGACTGGTAGGCGGTGCCGGGCCGGGG--GTGGTTCGGCGGAGGG 106
                        ** **    *     ** ** ** ** *       *  * *   ***** ***   *  

consensus_13216#0      GCACTGCTAGAGGACACAC-TGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAAC 1198
consensus_13216#1      GCACTGCTAGAGGACACACCTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAAC 166
consensus_13216#2      GTGGCGGCGCCGGGGACGAGCGGCCG------GTTTCGGCGGCGGGGCGGGCGGCAGGTN 160
                       *    *     **  **    ***         ***  * ***   * * **        

consensus_13216#0      TAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATT 1258
consensus_13216#1      TAAACTGATCCTCCATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATT 226
consensus_13216#2      TCGGCGG----CGCAGGCGGTGGGTNTCGGCGGCGCGGGCGCTGTCTCCTGGCGGCG--C 214
                       *   * *      **  * * *    * ** * * *   ** *       *  **     

consensus_13216#0      GAGTGTGCAACCCCATGTTCAGGTATTCTCTCAAG-ATTGATTTGGAGATGATCATTCTT 1317
consensus_13216#1      GAGTGTGCAACCCCATGTTCAGGTATTCTCTCAAGGATTGATTTGGAGATGATCATTCTT 286
consensus_13216#2      GGGCN-GCGACTCCAGGCGANCCCTTCCTCGTACCCCCGATCTCGGAAAAGAGGATTATA 273
                       * *   ** ** *** *        * ***  *         * *** * **  *** * 

consensus_13216#0      TTTCTGAAATACTGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTG 1377
consensus_13216#1      TTTCTGAAATACTGTTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTG 346
consensus_13216#2      AGGTAAAAGCACACACAAATCTAAC-ACCACTACAGC-GATAAACCCCCAAACCCACCAA 331
                             **  **    *   * *    *  * *  ** ****  *  ***    ****  

consensus_13216#0      TACTGAACTGCATTTACCTGTACGTCGAGCTGTGGGCCTTGCATTTGTTGTAATGGTGTA 1437
consensus_13216#1      TACTGAACTGCATTTACCTGTACGTCGAGCTGTGGGCCTTGCATTTGTTGTAATGGTGTA 406
consensus_13216#2      CACGCTGCTGCGGCTGCGC---CGCCGGAA------------------------------ 358
                        **    ****   * *     ** **                                 

consensus_13216#0      GAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTG 1497
consensus_13216#1      GAAGTATTTCCCAGAGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTG 466
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      AGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGT 1557
consensus_13216#1      AGGAGGTATTGGGAGGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGT 526
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      TTAACCTGGGCAAGTGGGCAGGGCATGTTCGCATTTCACGTCTCCATGCCTTGCGCAAAA 1617
consensus_13216#1      TTAACCTGGGCCAAAAAAAAAA-------------------------------------- 548
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      AAGAATTCAAATATCTATCTTTTTAAAAAAAAAGGTTTTGACAGGATGCCGAAAAAAGGT 1677
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      GTGGTATGTTTCTGTTTGATTGATTAGCACCGCCTAACCTCTTTTTCCTAAACCATGTAA 1737
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      TACAGTTAATTCAAGTCCTATCGGATGAAACAAATCAACCAGATCGGTGATTTGTATGTA 1797
consensus_13216#1      ------------------------------------------------------------
consensus_13216#2      ------------------------------------------------------------
                                                                                   

consensus_13216#0      TGTACTTAGACAAAGTCAAATAAGAGA 1824
consensus_13216#1      ---------------------------
consensus_13216#2      ---------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)