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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13242#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2150 fasta sequence
[CATCGATCTTCTTTCTCTTCCCCAGCTCGACCACGACCACTCCCGGGAGGGAGAGGGAGAGGGAGAGCAGCAGCAGCGGTAGCCAGTTAGTCCAGCTGATGCCGCCGAAGCGGCGGCCGGAGGAGGAGTCGCCGCAGGCGGCGGCGCTGAAGAAGCGGTGCCGGTCGTTCGACCTAGAGATCAGGGGTTGCAGGCACCTGCAGGAGCTCGCCGCCGGCTGCGTCCGCACGCTCGAGGCCGCGCTCGAGTCCGCCATTAGCCGGATTCCAGAGGAGGTGACAAAAGCACTTACAAGCTTCCTAATCCGTGCTCCTAGAACACTGTCTGATCAGAACCAGCCTCCAAGGTACAAGCTTAGGTTCTCAAATGGCTTGAGCAATGAAGTTTTCACAAAGAAAGGAATCTGTGATGTTAATGGAGAGTCTCTCAAGATATCTGTGCATGTAAACAACCCACAAGAGGCCTGCTCGCATCGCCTTCTTTCTGCTAAGATCAGAGTTGTTGTTCTTGATGGTGACTTCAACAAGAATGATCAGGGGTGCTGGACATCAGAGGAGTTCAGAAACCACATAGTGCGCCCACGTGATAAAGTTGGGACTGTGCTGACTGGAGAGCTTGAGCTTAGCCTGAAAAATGGAGAGGCTTACATCCATGATGCCACTTTTGTTGATAACTCCAAGTTCATGAGGAGTGGTAAGTTCAGACTTGGGGTAATGGTTATTGATGATCTCGGTGAACGTATTCAGGAAGGCATAACTGAACCTTTCGTTGTGAAGGATCGTCGCGGAGAAGGTTCCAAAAAGCATGAAATTCCATCATTGGATGATGATGTCTGGCGCCTGAAGAAGATATCAAAAGATGGTGTCTTCCATGATGCATTGAAACAGAGTGGCATTTCAAACGTGAAGGAATTCCTTAGGCTGTACTATACTGATGAGCCAGCTCTGCGCAAAATTCTTATTAAGGCCACTGATAAAGTTTGGACGACTATCATTGAGCATGCTAAGAAGTGTGATCCTGGAAGAGAGCTGTACTCTTTCTTGCCGGAAAACCGCAATGTTGTGCTGTTCTTCAACTCTATCCATCAGATTGTTGGGGTGATAACTGGTGACCATTACACTCCCTTCAGTGATCTTGACAAGCCTATGCAGGATGATGTAGGACAACTGAGCAAATTAGCATATGCAGATTTGAACCACTTCCTACCTGATTTTGAAATGAAAAATGGCAAACCAAGACAAATCAACCAATGCGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATCCAAGGACATATGGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAAGAGAAATGTCCATGAATCTGATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAGGTTTGGATCTGTGCGAGTGACACACGTGGCATCCTTGAACAAAAACGATGAAGATTCTTTGGACTTCAGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCAAGCATGAACACAAATGAGATAGCAGGCTCGGTGACATTCCA-TTGTCCAACCGC--TTCTA-CAAA-TG--AAA--TTACTGGATCA-GTGGTGA-TGAG-GCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACA-GGTGGTTACCGCACAATTTGA-TCCATCTTT-TT-TAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACA-TTCATTTTGATGCATATTTAGGTCA-AGTACTGTTTTGAGTCTCATTTTCTTAATATGCCA-GCTTGGTA-TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT-TGTACTATTTACTGGATCATTATTATTTAGT-TACA-AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG-CCGGGGATGTAATTCATCTTCCTTATTAAAAA-CAATAAATATTGTGTCTAAATTCATTCATATGTTGTACACATTCAGTAAAAATACGGAGTATAATTTACTGAAACCAGATAAAAAAAAA]
[+] EMBL AK102354 [CATCGATCTTCTTTCTCTTCCCCAGCTCGACCACGACCACTCCCGGGAGGGAGAGGGAGAGGGAGAGCAGCAGCAGCGGTAGCCAGTTAGTCCAGCTGATGCCGCCGAAGCGGCGGCCGGAGGAGGAGTCGCCGCAGGCGGCGGCGCTGAAGAAGCGGTGCCGGTCGTTCGACCTAGAGATCAGGGGTTGCAGGCACCTGCAGGAGCTCGCCGCCGGCTGCGTCCGCACGCTCGAGGCCGCGCTCGAGTCCGCCATTAGCCGGATTCCAGAGGAGGTGACAAAAGCACTTACAAGCTTCCTAATCCGTGCTCCTAGAACACTGTCTGATCAGAACCAGCCTCCAAGGTACAAGCTTAGGTTCTCAAATGGCTTGAGCAATGAAGTTTTCACAAAGAAAGGAATCTGTGATGTTAATGGAGAGTCTCTCAAGATATCTGTGCATGTAAACAACCCACAAGAGGCCTGCTCGCATCGCCTTCTTTCTGCTAAGATCAGAGTTGTTGTTCTTGATGGTGACTTCAACAAGAATGATCAGGGGTGCTGGACATCAGAGGAGTTCAGAAACCACATAGTGCGCCCACGTGATAAAGTTGGGACTGTGCTGACTGGAGAGCTTGAGCTTAGCCTGAAAAATGGAGAGGCTTACATCCATGATGCCACTTTTGTTGATAACTCCAAGTTCATGAGGAGTGGTAAGTTCAGACTTGGGGTAATGGTTATTGATGATCTCGGTGAACGTATTCAGGAAGGCATAACTGAACCTTTCGTTGTGAAGGATCGTCGCGGAGAAGGTTCCAAAAAGCATGAAATTCCATCATTGGATGATGATGTCTGGCGCCTGAAGAAGATATCAAAAGATGGTGTCTTCCATGATGCATTGAAACAGAGTGGCATTTCAAACGTGAAGGAATTCCTTAGGCTGTACTATACTGATGAGCCAGCTCTGCGCAAAATTCTTATTAAGGCCACTGATAAAGTTTGGACGACTATCATTGAGCATGCTAAGAAGTGTGATCCTGGAAGAGAGCTGTACTCTTTCTTGCCGGAAAACCGCAATGTTGTGCTGTTCTTCAACTCTATCCATCAGATTGTTGGGGTGATAACTGGTGACCATTACACTCCCTTCAGTGATCTTGACAAGCCTATGCAGGATGATGTAGGACAACTGAGCAAATTAGCATATGCAGATTTGAACCACTTCCTACCTGATTTTGAAATGAAAAATGGCAAACCAAGACAAATCAACCAATGCGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATCCAAGGACATATGGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAAGAGAAATGTCCATGAATCTGATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAGGTTTGGATCTGTGCGAGTGACACACGTGGCATCCTTGAACAAAAACGATGAAGATTCTTTGGACTTCAGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCAAGCATGAACACAAATGAGATAGCAGCCTCGGTGACATTCCA TTGTCCAACCGC TTCTA CAAA TG AAA TTACTGGATCA GTGGTGA TGAG GCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACA GGTGGTTACCGCACAATTTGA TCCATCTTT TT TAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACA TTCATTTTGATGCATATTTAGGTCA AGTACTGTTTTGAGTCTCATTTTCTTAATATGCCA GCTTGGTA TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT TGTACTATTTACTGGATCATTATTATTTAGT TACA AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG CCGGGGATGTAATTCATCTTCCTTATTAAAAA CAATAAA ]
[+] EMBL BI118690 [ GGTTCTCAAATGGCTTGAGCAATGAAGTTTTCACAAAGAAAGGAATCTGTGATGTTAATGGAGAGTCTCTCAATATATCTGTGCATGTAAACAACCCACAAGAGGCCTGCTCGCATCGCCTTCTTTCTGCTAAGATCAGAGTTGTTGTTCTTGATGGTGACTTCAACAAGAATGATCAGGGGTGCTGGACATCAGAGGAGTTCAGAAACCACATAGTGCGCCCACGTGATAAAGTTGGGGCTGTGCTGACTGGAGAGCTTGAGCTTAGCCTGAAAAATGGAGAGGCTTACATCCATGATGCCACTTTTGTTGATAACTCCAAGTTCATGAGGAGTGGTAAGTTCAGACTCGGGGTAATGGTTATTGATGATCTCGGTGAACGTATTCAGGAAGGCATAACTGAACCTTTCGTTGTGAAGGATCGTCGCGGARAAGGTTCCAAAAAGCATGAAATTCCATCATTGGATGATGATGTCTGGCGCCTGAARAAGATATCAAAARATGGTGTCTTCCATGATGCATTGAAACAGAGTGGCATTTCAAACGTGAAGGAATTC ]
[-] EMBL BI118719 [ agGTACTCTTTCTTGCCGGAAAACCGCAATGTTGTGCTGTTCTTCAACTCTATCCATCAGATTGTTGGGGTGATAACTGGTGACCATTACACTCCCTTCAGTGATCTTGACAAGTCTATGCAGGATGATGTAGGACAACTGAGCAAATTAGCATATGCAGATTTGAACCACTTCCTACCTGATTTTGAAATGAAAAATGGCAAACCAAGACAAATCAACCAATGTGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATCCAAGGACATATGGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAAGAGAAATGTCCATGAATCTGATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAGGTTTGGATCTGTGCGAGTGACACGCGTGGCATCCTTGAACAAAAACGATGAAGATTCTTTGGACTTCAGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCAAGCATGAACACAAATGAGATAGCAGGCTCGGTGACATTCCA TTGTCCAACCGC TTCTA CAAA TG AAA TTACTGGATCA GTGGTGA TGAG GCAAGCATCTTTCAGAATGGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACA GGTGGTTACCGCACAATTTGA TCCATCTTT ]
[+] EMBL BI811759 [ cAAAACGATGAAGATTCTTTGGACTCCAGTTTCCTCCTGAATTCTCTATCTGACC ACATGATGC AGCATGAACACAAATGAGATACCAGGCTCGGTGACATTCCA TTGTCCAACCGC TTCTA CAAA TG AAA TTACTGGATCACGTGGTGA TGAG GCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGC ACA GGTGGTTACCGCAC ATTTGA TCCATCTTT TT TAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTAC AAAGCTGTCTGAAGACTGATTTCCCTAAGAAC ATGAACA TTCATTTTGATGCATATTTAGGTCA AGTACTGTTTTGAGTCTCATTTTCTTAATATGCCA GCTTGGTA TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT TGTACTATTTACTGGATCATTATTATTTAGT TAC AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG CCGGGGATGTAATTCATCTTCCTTATTAAAAA CAATAAATATTGTGTCTAAAaa ]
[+] EMBL BQ906768 [ ATCTGACCGACATGATGCAAGCATGAACAC AATGAGATAGCAGGCTCGGTGACATTCCACTTGTCCAACCGCTTTTCTACCAAAGTGGAAAATTTTACTGGATCA GTGGTGATTGAG GCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACACGGTGGTTACCGCACAATTTGACTCCATCTTT TT TAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTACCAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACACTTCATTTTGATGCATATTTAGGTCACAGTACTGTTTTGAGTCTCATTTTCTTAATATGCCACGCTTGGTA TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCTCTGTACTATTTACTGGATCATTATTATTTAGTNTACA AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG CCGGGGATGTAATTCATCTTCCTTATTAAAAA CAATAAATATTGTGTCTAAATTCATTCATATGTTGTACACATTCAGTAAAAATACGGAGTATAATTTACTGAAACCAGATAAAAAAAAA]
[+] EMBL BQ908222 [ acGCAGGCTCGGTGACATTCCA TTGTCCAACCGC TTCTA CAAA TG AAA TTACTGGATCA GTGGTGA TGAG GCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCCCCAAGAGCAACA GGTGGTTACCGCACAATTTGA TCCATCTTT TT TAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTACCAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACA TTCATTTTGATGCATATTTAGGTCA AGTACTGTTTTGAGTCTCATTTTCTTAATATGCCA GCTTGGTA TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT TGTACTATTTACTGGATCATTATTATTTAGT TACA AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGGCCCGGGGATGTAATTCATCTTCCTTATTAAAAACCAATAAAaaaaaaa ]
[+] EMBL BI813657 [ TGGATCA GTGGTGA TGAGCGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGC ACA GGTGGTTACCGCAC ATTTGA TCCATCTTTGTT TAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCAC ACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTAC AAAGCTGTCTGAAGACTGATTTCCCTAAGAACCATGAACA TTCATTTTGATGCATATTTA GTCA AGTACT TTTTGAGTCTCATTTTCTTAATATGCCACGCTTGGTA TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT TGTACTATTTACTGGATCATTATTATTTAGT TACACAGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG CCGGGGATGTAATTCATCTTCCTTATTAAAAA CAATAAATATTGTGTCTAAATTCATTCATATGTTGTACACATTCAGTAAAAATACGGAGTATAATTTACTGAAACCAGATAAAAAAAAA]
[+] EMBL BM420193 [ GA TGAG GCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACA GGTGGTTACCGCACAATTTGA TCCATCTTT TTGTAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACA TTCATTTTGATGCATATTTAGGTCA AGTACTGTTTTGAGTCTCATTTTCTTAATATGCCA GCTTGGTA TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT TGTACTATTTACTGGATCATTATTATTTAGT TACA AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG CCGGGGATGTAATTCATCTTCCTTATTAAAAA C ATAAATATTGTGTCTAAATTCAaaaaa ]
[+] EMBL AK058825 [ GAATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACA TTCATTTTGATGCATATTTAGGTCA AGTACTGTTTTGAGTCTCATTTTCTTAATATGCCA GCTTGGTA TTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT TGTACTATTTACTGGATCATTATTATTTAGT TACA AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG CCGGG ]
[+] EMBL BI812949 [ CTTGGTATTTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCT TGTACTATTTACTGGATCATTATTATTTAGT TAC AGAACTTTGGCTCTGTGCATGCTAGATGCAGAGG CCGGGGATGTAATTCATCTTCCTTATTAAAAACCAATAAATATTGTGTCTAAATTCATTCATATGTTGTACACATTCAGTAAAAAa ]
consensusID : consensus_13242#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 776 fasta sequence
[ATATGCAGATTTGAACCACTTCCTTACCTGATTTGAAATGAAAAATGGCAAACCAAGACAAATCAACCAATGCGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATCCAAGGACATATGGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAGTAATAGTCTGCATTTTTTTTTTCATGCATCTGACAATGGTTGTTGACACTCTAACAAAATACAGTGGCTCATTGACATCAAAACTTTCAAGCTGTTACAGAGAGAAATGTCCATGAATCTGATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAGGTTTGGATCTGTGCGAGTGACACACGTGGCATCCTTGAACAAAAACGATGAAGTAAGTTAAGCCTGAAAAAAATGTAATTCAATTGCAATTCAAATTTCATCTACTTTCTAATCCTTTACAATGAAATTGACATATTTCACAGTATTATTTGGGATCTTTGTCTGATGTTCTTACTGAATAATACCTCCCAGGATTCTTTGGACTTCAGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCAAGCATGAACACAAATGAGATAGCAGCCTCGGTGACATTCCATTGTCCAACCGCTTCTACAAATGAAATTACTGGATCAGTGGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGGTAATTACTTGACAAAGAACAACTTGCCCATTTCTATTCCCTGCAAT]
[-] EMBL CB663852 [ATATGCAGATTTGAACCACTTCCTTACCTGATTTGAAATGAAAAATGGCAAACCAAGACAAATCAACCAATGCGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATCCAAGGACATATGGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAGTAATAGTCTGCATTTTTTTTTTCATGCATCTGACAATGGTTGTTGACACTCTAACAAAATACAGTGGCTCATTGACATCAAAACTTTCAAGCTGTTACAGAGAGAAATGTCCATGAATCTGATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAGGTTTGGATCTGTGCGAGTGACACACGTGGCATCCTTGAACAAAAACGATGAAGTAAGTTAAGCCTGAAAAAAATGTAATTCAATTGCAATTCAAATTTCATCTACTTTCTAATCCTTTACAATGAAATTGACATATTTCACAGTATTATTTGGGATCTTTGTCTGATGTTCTTACTGAATAATACCTCCCAGGATTCTTTGGACTTCAGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCAAGCATGAACACAAATGAGATAGCAGCCTCGGTGACATTCCATTGTCCAACCGCTTCTACAAATGAAATTACTGGATCAGTGGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGGTAATTACTTGACAAAGAACAACTTGCCCATTTCTATTCCCTGCAAT]
consensusID : consensus_13242#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[AAGAGAATGTCCATGATTTGATGATCACAAGGACTTCTGGCCAGTCATCCAGGCAGTGCAATTATCAAGGTTTGGATCTGTGCGAGTGACACGCGTGGCATCCCCTTGACCAAAACGATGAAGATTCTTTGGACTTCAGTTTCCTCCTGATTCTCTATCTGCCAACATGATGCAAGCATGAACCAAATGAGATAGCAGGCTCGGGTGACATTCCATTGCCAACCGCTTCTACAAATGAATTACTGGATCAGTGGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACAGGTGGTTACCGCACAATTTGATCCATCTTTTTTAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACATTCATTTTGATGCATATTTAGGTCAAGTACCTCGGGGGCGACCACGCTAATA]
[-] EMBL BU572348 [AAGAGAATGTCCATGATTTGATGATCACAAGGACTTCTGGCCAGTCATCCAGGCAGTGCAATTATCAAGGTTTGGATCTGTGCGAGTGACACGCGTGGCATCCCCTTGACCAAAACGATGAAGATTCTTTGGACTTCAGTTTCCTCCTGATTCTCTATCTGCCAACATGATGCAAGCATGAACCAAATGAGATAGCAGGCTCGGGTGACATTCCATTGCCAACCGCTTCTACAAATGAATTACTGGATCAGTGGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGTTGCTGAATTCCACCAAGAGCAACAGGTGGTTACCGCACAATTTGATCCATCTTTTTTAGCTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCCACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAACATTCATTTTGATGCATATTTAGGTCAAGTACCTCGGGGGCGACCACGCTAATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13242#0 CATCGATCTTCTTTCTCTTCCCCAGCTCGACCACGACCACTCCCGGGAGGGAGAGGGAGA 60
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 GGGAGAGCAGCAGCAGCGGTAGCCAGTTAGTCCAGCTGATGCCGCCGAAGCGGCGGCCGG 120
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 AGGAGGAGTCGCCGCAGGCGGCGGCGCTGAAGAAGCGGTGCCGGTCGTTCGACCTAGAGA 180
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TCAGGGGTTGCAGGCACCTGCAGGAGCTCGCCGCCGGCTGCGTCCGCACGCTCGAGGCCG 240
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 CGCTCGAGTCCGCCATTAGCCGGATTCCAGAGGAGGTGACAAAAGCACTTACAAGCTTCC 300
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TAATCCGTGCTCCTAGAACACTGTCTGATCAGAACCAGCCTCCAAGGTACAAGCTTAGGT 360
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TCTCAAATGGCTTGAGCAATGAAGTTTTCACAAAGAAAGGAATCTGTGATGTTAATGGAG 420
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 AGTCTCTCAAGATATCTGTGCATGTAAACAACCCACAAGAGGCCTGCTCGCATCGCCTTC 480
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TTTCTGCTAAGATCAGAGTTGTTGTTCTTGATGGTGACTTCAACAAGAATGATCAGGGGT 540
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 GCTGGACATCAGAGGAGTTCAGAAACCACATAGTGCGCCCACGTGATAAAGTTGGGACTG 600
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TGCTGACTGGAGAGCTTGAGCTTAGCCTGAAAAATGGAGAGGCTTACATCCATGATGCCA 660
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 CTTTTGTTGATAACTCCAAGTTCATGAGGAGTGGTAAGTTCAGACTTGGGGTAATGGTTA 720
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TTGATGATCTCGGTGAACGTATTCAGGAAGGCATAACTGAACCTTTCGTTGTGAAGGATC 780
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 GTCGCGGAGAAGGTTCCAAAAAGCATGAAATTCCATCATTGGATGATGATGTCTGGCGCC 840
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TGAAGAAGATATCAAAAGATGGTGTCTTCCATGATGCATTGAAACAGAGTGGCATTTCAA 900
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 ACGTGAAGGAATTCCTTAGGCTGTACTATACTGATGAGCCAGCTCTGCGCAAAATTCTTA 960
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TTAAGGCCACTGATAAAGTTTGGACGACTATCATTGAGCATGCTAAGAAGTGTGATCCTG 1020
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 GAAGAGAGCTGTACTCTTTCTTGCCGGAAAACCGCAATGTTGTGCTGTTCTTCAACTCTA 1080
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 -----------------------------------------------------------A 1
consensus_13242#0 TCCATCAGATTGTTGGGGTGATAACTGGTGACCATTACACTCCCTTCAGTGATCTTGACA 1140
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 TATGCAGATTTGAACCACTTCCTTACCTGATTTGAAATGAAAAATGGCAAACCAAGACAA 61
consensus_13242#0 AGCCTATGCAGGATGATGTAGGACAACTGAGCAAATTAGCATATGCAGATTTGAACCACT 1200
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ATCAACCAATGCGCTTTCCAAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATC 121
consensus_13242#0 TCCTACCTGATTTTGAAATGAAAAATGGCAAACCAAGACAAATCAACCAATGCGCTTTCC 1260
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 CAAGGACATATGGATCCTAATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAGT 181
consensus_13242#0 AAGAATCGAGAATGGTGGAGCCTAAATTTACTGACCAAATCCAAGGACATATGGATCCTA 1320
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 AATAGTCTGCATTTTTTTTTTCATGCATCTGACAATGGTTGTTGACACTCTAACAAAATA 241
consensus_13242#0 ATTTTGCTGGCCTTATACAAGGAAATATGGATCAAAAGAAGAGAAATGTCCATGAATCTG 1380
consensus_13242#2 --------------------------------------AAGAGAA-TGTCCATGA-TTTG 20
consensus_13242#1 CAGTGGCTCATTGACATCAAAACTTTCAAGCTGTTACAGAGAGAAATGTCCATGAATCTG 301
****** ********* * **
consensus_13242#0 ATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAGGTTTGGAT 1440
consensus_13242#2 ATGATCA-CAAGGACTTCTGGCCAGTCATCC-AGGCAGTGCAA-TTATCAAGGTTTGGAT 77
consensus_13242#1 ATGATCAGCAAGGAACTTCTGGCAGTCATCCCAGGCAGTGCAAATTATCAAGGTTTGGAT 361
******* ****** * * ********* *********** ****************
consensus_13242#0 CTGTGCGAGTGACACACGTGGCATCCT-TGAACAAAAACGATGAAGATTCTTTGGACTTC 1499
consensus_13242#2 CTGTGCGAGTGACACGCGTGGCATCCCCTTGACCAAAACGATGAAGATTCTTTGGACTTC 137
consensus_13242#1 CTGTGCGAGTGACACACGTGGCATCCT-TGAACAAAAACGATGAAG-TAAGTTAAGCCTG 419
*************** ********** * ** ************ * ** * *
consensus_13242#0 AGTTTCCTCCTGAATTCTCTATCTGACCAACATGATGCAAGCATGAACACAAATGAGATA 1559
consensus_13242#2 AGTTTCCTCCTGA-TTCTCTATCTG-CCAACATGATGCAAGCATGAAC-CAAATGAGATA 194
consensus_13242#1 AAAAAAATG-TAATTCAATTGCAATTCAAATTTCATCTACTTTCTAAT-CCTTTACAATG 477
* * * * * * * ** * ** * ** * * **
consensus_13242#0 GCAGGCTCGG-TGACATTCCATTGTCCAACCGCTTCTACAAATGAAATTACTGGATCAGT 1618
consensus_13242#2 GCAGGCTCGGGTGACATTCCATTG-CCAACCGCTTCTACAAATGAA-TTACTGGATCAGT 252
consensus_13242#1 AAATTGACATATTTCACAGTATTATTTGGGATCTTTGTCTGATGTTCTTACTGAAT-AAT 536
* * * ** *** *** * *** ****** ** * *
consensus_13242#0 GGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGT 1678
consensus_13242#2 GGTGATGAGGCAAGCATCTTTCAGAATAGATCATCCAGCTTGTGAAAATGATGCTTCAGT 312
consensus_13242#1 ACCTCCCAGG-----ATTCTTTGGACT---TCAGTTTCCTCCTGAATTCTCTATCTGACC 588
*** ** ** ** * *** ** **** * * *
consensus_13242#0 TGCTGAATTCCACCAAGAGCAACAGGTGGTTACCGCACAATTTGATCCATCTTT-TTTAG 1737
consensus_13242#2 TGCTGAATTCCACCAAGAGCAACAGGTGGTTACCGCACAATTTGATCCATCTTT-TTTAG 371
consensus_13242#1 AACATGATGCAAGCATGAACACAAATGAGATAGCAGCCTCGGTGACATTCCATTGTCCAA 648
* ** * * ** ** ** * * ** * * *** * ** * *
consensus_13242#0 CTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCC 1797
consensus_13242#2 CTGTACTCGCTGATGCCCCCATGTACTCAACGCACAACAGCTTCAAAGAGAGTGAATGCC 431
consensus_13242#1 CCGCTTCTACAAATGA----AATTACTGGAT---CAGTGGTGATGAGGCAAGCATCTTTC 701
* * * *** * **** * ** * * * ** * *
consensus_13242#0 ACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAAC-ATTCATT 1856
consensus_13242#2 ACGAGGCGCTACAAAAGCTGTCTGAAGACTGATTTCCCTAAGAACAATGAAC-ATTCATT 490
consensus_13242#1 AGAATAGATCATCCAGCTTGTGAAAATGGTAATTACTTGACAAAGAACAACTTGCCCATT 761
* * * * *** ** * *** * * ** ** * ****
consensus_13242#0 TTGATGCATATTTAGGTCAAGTACTGTTTTGAGTCTCATTTTCTTAATATGCCAGCTTGG 1916
consensus_13242#2 TTGATGCATATTTAGGTCAAGTACC---TCGGGGGCGACCACGCTAATA----------- 536
consensus_13242#1 TCTATTCCCTGCAAT--------------------------------------------- 776
* ** * *
consensus_13242#0 TATTAGTGATTGCTTCTATTTAATTTGTAATGTGCTCATATTCTTGTACTATTTACTGGA 1976
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TCATTATTATTTAGTTACAAGAACTTTGGCTCTGTGCATGCTAGATGCAGAGGCCGGGGA 2036
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TGTAATTCATCTTCCTTATTAAAAACAATAAATATTGTGTCTAAATTCATTCATATGTTG 2096
consensus_13242#2 ------------------------------------------------------------
consensus_13242#1 ------------------------------------------------------------
consensus_13242#0 TACACATTCAGTAAAAATACGGAGTATAATTTACTGAAACCAGATAAAAAAAAA 2150
consensus_13242#2 ------------------------------------------------------
consensus_13242#1 ------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||