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Oryza sativa
cluster # 13248 cluster # 13248       Sequences # 12       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13248#0 length = 2348 sequences # 4  
consensus_13248#1 length = 1478 sequences # 2  
consensus_13248#2 length = 873 sequences # 3  
consensus_13248#3 length = 644 sequences # 1  
consensus_13248#4 length = 571 sequences # 2  

consensusID : consensus_13248#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2348
fasta sequence
                              [CTACATTACCACATAGCCTTCTTTGTTTCTCCCTCCCTCCCTCTCCAACACACCAATCCCATCCCCAGTGTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCGCTGTCTGACTTATTTTTTTATTCCTTTTTTTGCACAAGAAATTGTGATGCAATGTATTTCAGGAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTTCTACATAGCTAACCTTTATGTATATTACCTTGTTATAAGATATTGGTCAGGACTCAGGTGGAAAGGATACCATATAAGATTCTATTTTACTTTTAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCATCCCTATTTGAAGATTTTGGTTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGAATAAGAAGTGGGTTGCTAGTGACTTTCCTCAACAAAAGAGAAGCTGCGCTGATGATGTTTGAAAATAGTATGCTTGTGAAATTCTAGTTAGCTATCATTTGTGTTGGTTCATTTCCTTGACCAATCAAAGACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAG-GAGGAACACTTTTCAGGTGTTATCCTGGG-CCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCT-GCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGT-GGCCCTCGACATCCTTCCTTCTGCCTAGAACT-TTTCAT-GAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGAC-TTTC-GTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATTTGTCCTGCCAAAAATTAAGACTTTTTTTTTTGTCGGGATGACCGAAGGAGGTCATCCAATGTTATTAAGATAGAGGAGGAAAAAAATGTTACAAGAAGGTTTTTCATCGACAACAAGTTGTCGAGGAAGGATGTGCACCAAAGCACACTCCCCGACACCACATGCCAACCGCACAAACACAAGCTACAAAGAAGAGAGCCGAACACCGAACCGGCCGCCGCTATGCAAGGCAGGTCGTCGCCGGGCTTACAACAACACCACATAACGGATATTCTAAAAAAGACAACGCCTTCACGAAAGTAGTGACGTCAAAAGACGCCGTCGTTGTCCGTCCAAAGAGACTAGACATGGTTTTCACCTAGAGATCCTCGTCGAAGGAGGAGGGTACCTCGACAATGCCCCCAAGAGGGTTACCGCGCCTGAAGGCGTAGCCGCTGCCGACCAAGTGTTTTGTTACCGTGCTTGAAGGCGTAGCCGCTGCCGGTCCAGTGAAACACTGGGCTAGGCTTTCGCCTCCTCTACCCCCGTCGTCGTGGTCCGTCGCCCACCAACTCTGATACCACCAGCCCAGTGTATGAGAAGTAAGGATCCGTTGGGTAAACTGAAATGCTAGTGTGTAAGAGAGATCGGATAATGGACAGCTCAGGATTTATGCAAATTTGAGTATTTTGGCCAGGATAAAAACATCAAGAGGAAGAACCGGCCTTCCTTTCTGTTAATTGAGATCGAAGTGTTGCAAATTGCTTAGAAGAACGATACCACTAAGAACAAGTTAACAATTGATCTA]

[+] EMBL AK065700             [CTACATTACCACATAGCCTTCTTTGTTTCTCCCTCCCTCCCTCTCCAACACACCAATCCCATCCCCAGTGTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCGCTGTCTGACTTATTTTTTTATTCCTTTTTTTGCACAAGAAATTGTGATGCAATGTATTTCAGGAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTTCTACATAGCTAACCTTTATGTATATTACCTTGTTATAAGATATTGGTCAGGACTCAGGTGGAAAGGATACCATATAAGATTCTATTTTACTTTTAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCATCCCTATTTGAAGATTTTGGTTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGAATAAGAAGTGGGTTGCTAGTGACTTTCCTCAACAAAAGAGAAGCTGCGCTGATGATGTTTGAAAATAGTATGCTTGTGAAATTCTAGTTAGCTATCATTTGTGTTGGTTCATTTCCTTGACCAATCAAAGACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAG GAGGAACACTTTTCAGGTGTTATCCTGGG CCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCT GCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGT GGCCCTCGACATCCTTCCTTCTGCCTAGAACT TTTCAT GAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGAC TTTC GTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB684614             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCCCCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAGCGAGGAACACTTTTCAGGTGTTATCCTGGG CCTTGGAAGGTTCTGATAAACATAGGTGGCAGTTTCTTCT GCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGT GGCCCTCGACATCCTTCCTTCTGCCTAAAACT TTTCAT GAATCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGAC TTTC GTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATTTGTCCTGCCAAAAATTAAGACTTTTTTTTTTGTCGGGATGACCGAAGGAGGTCATCCAATGTTATTAAGATAGAGGAGGAAAAAAATGTTACAAGAAGGTTTTTCATCGACAACAAGTTGTCGAGGAAGGATGTGCACCAAAGCACACTCCCCGACACCACATGCCAACCGCACAAACACAAGCTACAAAGAAGAGAGCCGAACACCGAACCGGCCGCCGCTATGCAAGGCAGGTCGTCGCCGGGCTTACAACAACACCACATAACGGATATTCTAAAAAAGACAACGCCTTCACGAAAGTAGTGACGTCAAAAGACGCCGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI806285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tgCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAG GAGGAACACTTTTCAGGTGTTATCCTGGGACCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCTGGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGGCCCTCGACATCCTTCCTTCTGCCTAGAACTGTTTCATGGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGACATTTCAGTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCAT GTTTGGT CCTTGATGGCGATCAAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB684615             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGAAGGAGGTCATCCAATGTTATTAAGATAGAGGAGGAAAAAAATGTTACAAGAAGGTTTTTCATCGACAACAAGTTGTCGAGGAAGGATGTGCACCAAAGCACACTCCCCGACACCACATGCCAACCGCACAAACACAAGCTACAAAGAAGAGAGCCGAACACCGAACCGGCCGCCGCTATGCAAGGCAGGTCGTCGCCGGGCTTACAACAACACCACATAACGGATATTCTAAAAAAGACAACGCCTTCACGAAGGTAGTGACGTCAAAAGACGCCGTCGTTGTCCGTCCAAAGAGACTAGACATGGTTTTCACCTAGAGATCCTCGTCGAAGGAGGAGGGTACCTCGACAATGCCCCCAAGAGGGTTACCGCGCCTGAAGGCGTAGCCGCTGCCGACCAAGTGTTTTGTTACCGTGCTTGAAGGCGTAGCCGCTGCCGGTCCAGTGAAACACTGGGCTAGGCTTTCGCCTCCTCTACCCCCGTCGTCGTGGTCCGTCGCCCACCAACTCTGATACCACCAGCCCAGTGTATGAGAAGTAAGGATCCGTTGGGTAAACTGAAATGCTAGTGTGTAAGAGAGATCGGATAATGGACAGCTCAGGATTTATGCAAATTTGAGTATTTTGGCCAGGATAAAAACATCAAGAGGAAGAACCGGCCTTCCTTTCTGTTAATTGAGATCGAAGTGTTGCAAATTGCTTAGAAGAACGATACCACTAAGAACAAGTTAACAATTGATCTA]


>consensus_13248#0 CTACATTACCACATAGCCTTCTTTGTTTCTCCCTCCCTCCCTCTCCAACACACCAATCCC ATCCCCAGTGTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTAT CCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAG GCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGT TCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCC CAAGCGATTACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAG CTTTTAAGGATGGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCGCTGTCTGACTTATT TTTTTATTCCTTTTTTTGCACAAGAAATTGTGATGCAATGTATTTCAGGAAATTGAGTTC CCTACAGCAGGACTACAATCTGTACCAGGTTCTACATAGCTAACCTTTATGTATATTACC TTGTTATAAGATATTGGTCAGGACTCAGGTGGAAAGGATACCATATAAGATTCTATTTTA CTTTTAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAA TTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAG GCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGAT TATCTAACAAAACCATCCCTATTTGAAGATTTTGGTTTTACAACAAAGGTCAAAATGTCA GACCGTGTGCGTCCAGAAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAAT GAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTG ATAATATTCAACGGGGAACTAGATCGAATAAGAAGTGGGTTGCTAGTGACTTTCCTCAAC AAAAGAGAAGCTGCGCTGATGATGTTTGAAAATAGTATGCTTGTGAAATTCTAGTTAGCT ATCATTTGTGTTGGTTCATTTCCTTGACCAATCAAAGACTACCCTCCTTTCTTCTACCCA AAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCAC AATTTTAAGGGACTCAAAGGAGGAACACTTTTCAGGTGTTATCCTGGGCCTTGGAAGGTT CTGAGAAACATAGGTGGCAGTTTCTTCTGCTTGCATGAACAAGAAGAGATGCCATCACTG AAGGAAGTGGCCCTCGACATCCTTCCTTCTGCCTAGAACTTTTCATGAGTCATTCCAAGC ATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTAT ATGTTGATGGACTTTCGTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGT GTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATAT TTGTCCTGCCAAAAATTAAGACTTTTTTTTTTGTCGGGATGACCGAAGGAGGTCATCCAA TGTTATTAAGATAGAGGAGGAAAAAAATGTTACAAGAAGGTTTTTCATCGACAACAAGTT GTCGAGGAAGGATGTGCACCAAAGCACACTCCCCGACACCACATGCCAACCGCACAAACA CAAGCTACAAAGAAGAGAGCCGAACACCGAACCGGCCGCCGCTATGCAAGGCAGGTCGTC GCCGGGCTTACAACAACACCACATAACGGATATTCTAAAAAAGACAACGCCTTCACGAAA GTAGTGACGTCAAAAGACGCCGTCGTTGTCCGTCCAAAGAGACTAGACATGGTTTTCACC TAGAGATCCTCGTCGAAGGAGGAGGGTACCTCGACAATGCCCCCAAGAGGGTTACCGCGC CTGAAGGCGTAGCCGCTGCCGACCAAGTGTTTTGTTACCGTGCTTGAAGGCGTAGCCGCT GCCGGTCCAGTGAAACACTGGGCTAGGCTTTCGCCTCCTCTACCCCCGTCGTCGTGGTCC GTCGCCCACCAACTCTGATACCACCAGCCCAGTGTATGAGAAGTAAGGATCCGTTGGGTA AACTGAAATGCTAGTGTGTAAGAGAGATCGGATAATGGACAGCTCAGGATTTATGCAAAT TTGAGTATTTTGGCCAGGATAAAAACATCAAGAGGAAGAACCGGCCTTCCTTTCTGTTAA TTGAGATCGAAGTGTTGCAAATTGCTTAGAAGAACGATACCACTAAGAACAAGTTAACAA TTGATCTA



consensusID : consensus_13248#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1478
fasta sequence
                              [GTCAGGACTCAGGTGGAAAGGATACCATATAAGATTCTATTTTACTTTTAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCATCCCTATTTGAAGATTTTGGTTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGAATAAGAAGTGGGTACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAGGAGGAACACTTTTCAGGTTTGCATATTCCAGCCTTCTTCTGTTGCTCTCCAAAATTAGCACCACTGACTCATGTCTATGCTTTTGCATGAGCAAGTTTTGGTCTAGCTATAATTAATTAATTCATTGACTGATTATACAGTTTTATGTTGGCCAATCATTCTTGAATCAATGTACCAATGATATGGCACCCAAATTAGATGCCTTCAGCTGCCATACTTTTTGGAGGATCCGATTAACTGTGTTTGGCAAGATAATTAACTTACTTACACTCCAATAACCCTAGTTGATTTTGTCTGTTACCCAGTTTGAATGATGCTCTAGTTAACATGACAACTTGAATGTTGCGTTCTATCCTTTATTGTTATTATTGTCACCATCGCCAGCATGGCTATTGTTTCTTGATATGTAATGCTTTGAAACAAATATATTCAGCTTGTTGTTACCATCAACTCACCATACCAAGATGTAGTTGCAGAAATTTAGTTTGGTATAAGTTGCAGTATGTTTATCTCATCAGGAGAAAAACATGATTGCATTCAGAACCTTTATGGAGCAAACTGTGGAGATTAAACGTGTGATTTTGCCGAAACTTTGTTGTCTGGCAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCTGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGCCCTCGACATCCTTCCTTCTGCCTAGAACTTTTCATGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGACTTTCGTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATT]

[+] EMBL CB642614             [GTCAGGACTCAGGTGGAAAGGATACCATATAAGATTCTATTTTACTTTTAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCATCCCTATTTGAAGATTTTGGTTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGAATAAGAAGTGGGTACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAGGAGGAACACTTTTCAGGTTTGCATATTCCAGCCTTCTTCTGTTGCTCTCCAAAATTAGCACCACTGACTCATGTCTATGCTTTTGCATGAGCAAGTTTTGGTCTAGCTATAATTAATTAATTCATTGACTGATTATACAGTTTTATGTTGGCCAATCATTCTTGAATCAATGTACCAATGATATGGCACCCAAATTAGATGCCTTCAGCTGCCATACTTTTTGGAGGATCCGATTAACTGTGTTTGGCAAGATAATTAACTTACTTACACTCCAATAACCCTAGTTGATTTTGTCTGTTACCCAGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB642615             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCAAATTAGATGCCTTCAGCTGCCATACTTTTTGGAGGATCCGATTAACTGTGTTTGGCAAGATAATTAACTTACTTACACTCCAATAACCCTAGTTGATTTTGTCTGTTACCCAGTTTGAATGATGCTCTAGTTAACATGACAACTTGAATGTTGCGTTCTATCCTTTATTGTTATTATTGTCACCATCGCCAGCATGGCTATTGTTTCTTGATATGTAATGCTTTGAAACAAATATATTCAGCTTGTTGTTACCATCAACTCACCATACCAAGATGTAGTTGCAGAAATTTAGTTTGGTATAAGTTGCAGTATGTTTATCTCATCAGGAGAAAAACATGATTGCATTCAGAACCTTTATGGAGCAAACTGTGGAGATTAAACGTGTGATTTTGCCGAAACTTTGTTGTCTGGCAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCTGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGCCCTCGACATCCTTCCTTCTGCCTAGAACTTTTCATGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGACTTTCGTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATT]


>consensus_13248#1 GTCAGGACTCAGGTGGAAAGGATACCATATAAGATTCTATTTTACTTTTAGGTGACAGTG AAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTG TCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCAT TTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCAT CCCTATTTGAAGATTTTGGTTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAG AAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTG AAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGG AACTAGATCGAATAAGAAGTGGGTACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAAC TTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGAC TCAAAGGAGGAACACTTTTCAGGTTTGCATATTCCAGCCTTCTTCTGTTGCTCTCCAAAA TTAGCACCACTGACTCATGTCTATGCTTTTGCATGAGCAAGTTTTGGTCTAGCTATAATT AATTAATTCATTGACTGATTATACAGTTTTATGTTGGCCAATCATTCTTGAATCAATGTA CCAATGATATGGCACCCAAATTAGATGCCTTCAGCTGCCATACTTTTTGGAGGATCCGAT TAACTGTGTTTGGCAAGATAATTAACTTACTTACACTCCAATAACCCTAGTTGATTTTGT CTGTTACCCAGTTTGAATGATGCTCTAGTTAACATGACAACTTGAATGTTGCGTTCTATC CTTTATTGTTATTATTGTCACCATCGCCAGCATGGCTATTGTTTCTTGATATGTAATGCT TTGAAACAAATATATTCAGCTTGTTGTTACCATCAACTCACCATACCAAGATGTAGTTGC AGAAATTTAGTTTGGTATAAGTTGCAGTATGTTTATCTCATCAGGAGAAAAACATGATTG CATTCAGAACCTTTATGGAGCAAACTGTGGAGATTAAACGTGTGATTTTGCCGAAACTTT GTTGTCTGGCAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTT CTTCTGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGCCCTCGACATCCT TCCTTCTGCCTAGAACTTTTCATGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGG GAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGACTTTCGTTGTAC ATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAG TGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATT



consensusID : consensus_13248#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 873
fasta sequence
                              [ACACCAATCCCATCCCCAGTGTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCG---------CAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCATCCCTATAAGAAGATCCAGGGTTTACAACAAAAGTCAAATGTCAGACCGTGTGCGTCAAANAAGANAAATTCCCGTGCCTATCCTTATTCCATGTCAATAAATGCTGTTGGTTAAGACTTACAAGGAACCATTGTACCCCGACCACACGTATATTATCACGGCAACATATCATTAAGTGGTACACCCTCTACTCCAAGCTACTTTATTTACATTTCTCAACGCAAANTATATCCNNTTGACCAGAACCTCTGGTTTCGGCGAGCTAAATGGTGTTGCTTATAATCCGCGCCGCCCTCATATTCTAGACAAGCTTTAT]

[+] EMBL CF308561             [ACACCAATCCCATCCCCAGTGTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCG         CAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCAT                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA753331             [         CCATCCCCAGTGTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAGCTTTCAAGGATGGGAAGCAGCTATTGGAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTGTCATTTGCAAGACAATCTGCCTTTGAAAGATGTCCCTTGAA CTAGATTATCTAACAAAACCATCCCTATAAGAAGATCCAGGGTTTACAACAAAAGTCAAATGTCAGACCGTGTGCGTCAAANAAGANAAATTCCCGTGCCTATCCTTATTCCATGTCAATAAATGCTGTTGGTTAAGACTTACAAGGAACCATTGTACCCCGACCACACGTATATTATCACGGCAACATATCATTAAGTGGTACACCCTCTACTCCAAGCTACTTTATTTACATTTCTCAACGCAAANTATATCCNNTTGACCAGAACCTCTGGTTTCGGCGAGCTAAATGGTGTTGCTTATAATCCGCGCCGCCCTCATATTCTAGACAAGCTTTAT]
[+] EMBL CF325774             [                                                                 CATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCTTTTTATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCG         CAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAG                                                                                                                                                                                                                                                                                                                                              ]


>consensus_13248#2 ACACCAATCCCATCCCCAGTGTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAA TCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGC AATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTT AAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGG GGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCGCAGGCAAAAGAAGCTGCTGAGTC AGCTTTTAAGGATGGGAAGCAGCTATTGGAAATTGAGTTCCCTACAGCAGGACTACAATC TGTACCAGGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGA ATTCTGTGATCGCTTTGTCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGA GGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGA TTATCTAACAAAACCATCCCTATAAGAAGATCCAGGGTTTACAACAAAAGTCAAATGTCA GACCGTGTGCGTCAAANAAGANAAATTCCCGTGCCTATCCTTATTCCATGTCAATAAATG CTGTTGGTTAAGACTTACAAGGAACCATTGTACCCCGACCACACGTATATTATCACGGCA ACATATCATTAAGTGGTACACCCTCTACTCCAAGCTACTTTATTTACATTTCTCAACGCA AANTATATCCNNTTGACCAGAACCTCTGGTTTCGGCGAGCTAAATGGTGTTGCTTATAAT CCGCGCCGCCCTCATATTCTAGACAAGCTTTAT



consensusID : consensus_13248#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 644
fasta sequence
                              [GTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGAATAAGAAGTGGGTACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAGGAGGAACACTTTTCAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCTGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGCCCTCGACATCCTTCCTTCTGCCTAGAACTTTTCGTGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGAAAACAGGTTATTTCTCCCTATATGTTGATGGACTTTCGTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATTTGTCCTGCCAAAAAA]

[-] EMBL CF308562             [GTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATATTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGAATAAGAAGTGGGTACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAGGAGGAACACTTTTCAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCTGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGCCCTCGACATCCTTCCTTCTGCCTAGAACTTTTCGTGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCCTAAAAGAAAACAGGTTATTTCTCCCTATATGTTGATGGACTTTCGTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATTTGTCCTGCCAAAAAA]


>consensus_13248#3 GTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATATTCCTCGT GGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGC AATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGAATAAGAAG TGGGTACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTTCTTCC AAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAGGAGGAACACTTTT CAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTCTGCTT GCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGCCCTCGACATCCTTCCTTCTGC CTAGAACTTTTCGTGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAAAAGCC TAAAAGAAAACAGGTTATTTCTCCCTATATGTTGATGGACTTTCGTTGTACATAAGGAGA GCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAATGCAT GGTTTGGTGCCTTGATGGCGATCAATATTTGTCCTGCCAAAAAA



consensusID : consensus_13248#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 571
fasta sequence
                              [GTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCACTGTCTGACTTATTTTTTTATTCCTTTTTTTGCACAAGNAATTGTGATGCAATGTATTTCANNAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTTCTACATAGCTAACCTTTATGTATATTACCTTGTTATAAGATATTGGTCNNNACTCNNNTGGAAAGNNTACCATATAAGNNNCTATTTTACTTTTAGGTGACAGTGANNNNNGAATNGNNNNGACTGNNN]

[+] EMBL CF195798             [GTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCACTGTCTGACTTATTTTTTTATTCCTTTTTTTGCACAAGNAATTGTGATGCAATGTATTTCANNAAATTGAGTTCCCTACAGCAGGACTACAATCTGTACCAGGTTCTACATAGCTAACCTTTATGTATATTACCTTGTTATAAGATATTGGTCNNNACTCNNNTGGAAAGNNTACCATATAAGNNNCTATTTTACTTTTAGGTGACAGTGANNNNNGAATNGNNNNGACTGNNN]
[+] EMBL CF195724             [GTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATTACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGGATGGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCACTGTCTGACTTATTTTTTTATTCCTTTTTTTGCACAAGAAATTGTGATGNNNTGTATTTCNNNANNNNGAGTNNNNTACAGCNNNNNTACAATCTGTANNNNNNTCTACATNGCT                                                                                                                       ]


>consensus_13248#4 GTTCAGTGACCATGGCAACCAGTTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTT CCTTTCCCAATAAACAGGTCCCAGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCA ACTACACTGGTGGTATTTATACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTT GTGCCGTCAATGGAGGTCAGGGCACTCGCAATGTGTCTGGGGCAGAGTTCCCAAGCGATT ACACTGAACTTCTAGCGCAGTGATTTCAGGCAAAAGAAGCTGCTGAGTCAGCTTTTAAGG ATGGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCACTGTCTGACTTATTTTTTTATTC CTTTTTTTGCACAAGNAATTGTGATGCAATGTATTTCANNAAATTGAGTTCCCTACAGCA GGACTACAATCTGTACCAGGTTCTACATAGCTAACCTTTATGTATATTACCTTGTTATAA GATATTGGTCNNNACTCNNNTGGAAAGNNTACCATATAAGNNNCTATTTTACTTTTAGGT GACAGTGANNNNNGAATNGNNNNGACTGNNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      ------------------------------------------------------------
consensus_13248#1      GTCAGGACTCAGGTGGAAAGGATACCATATAAGATTCTATTTTACTTTTAGGTGACAGTG 60
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      ------------------------------------------------------------
consensus_13248#1      AAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTG 120
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      ------------------------------------------------------------
consensus_13248#1      TCCCTGCTGAGAAAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCAT 180
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      -----------------------CTACATTACCACATAGCCTTCTTTGTTTCTCCCTCCC 37
consensus_13248#1      TTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCAT 240
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------ACACCAATCCCATCCCCAGTGTTCAGT-----GACCATG-GCAACCAG 42
consensus_13248#4      --------------------------------GTTCAGT-----GACCATG-GCAACCAG 22
consensus_13248#0      TCCCTCTCCAACACACCAATCCCATCCCCAGTGTTCAGT-----GACCATG-GCAACCAG 91
consensus_13248#1      CCCTATTTGAAGATTTTGGTTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAG 300
consensus_13248#3      -------------------GTTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAG 41
                                                       **  *       **** ** **  ****

consensus_13248#2      TTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCC 102
consensus_13248#4      TTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCC 82
consensus_13248#0      TTATTGCTCCATCTCCAATCCTCCATTATCCAAAACTTCCTTTCCCAATAAACAGGTCCC 151
consensus_13248#1      AAGACGAGATATTCC---TCGTGGCTTATCCCTA--TTTCAATGTCAATGAA-ATGCTTG 354
consensus_13248#3      AAGACGAGATATTCC---TCGTGGCTTATCCCTA--TTTCAATGTCAATGAA-ATGCTTG 95
                            *    **  *   ** *   ******  *  ** *  *  **** ** * *    

consensus_13248#2      AGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACT---ACACTGGTGGTATTTA 159
consensus_13248#4      AGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACT---ACACTGGTGGTATTTA 139
consensus_13248#0      AGGTTGGGTACTTCGAGCAATCAGCAAAGGCAAGGGCAACT---ACACTGGTGGTATTTA 208
consensus_13248#1      TGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCA 414
consensus_13248#3      TGGTTGAAGAGCTTTACAAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCA 155
                        *****   *  *  *  *   *****  *  **  **      * **** *  **** *

consensus_13248#2      TACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAAT--GGAGGT 217
consensus_13248#4      TACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAAT--GGAGGT 197
consensus_13248#0      TACTACAACAAAGAGGAATTTAAGAACTGGGTTCCATGTTTGTGCCGTCAAT--GGAGGT 266
consensus_13248#1      ACGGGGAACTAGATCGAA--TAAGAAGTGGGTACTACCCTCCTTTCTTCTACCCAAAGCT 472
consensus_13248#3      ACGGGGAACTAGATCGAA--TAAGAAGTGGGTACTACCCTCCTTTCTTCTACCCAAAGCT 213
                             *** *    ***  ****** ***** * *   *  *  * ** *     ** *

consensus_13248#2      CAGGGCACTCGC-AATGTGTCTGGGGCAGAGTTCC---CAAGCGATTACACTGA-ACTTC 272
consensus_13248#4      CAGGGCACTCGC-AATGTGTCTGGGGCAGAGTTCC---CAAGCGATTACACTGA-ACTTC 252
consensus_13248#0      CAGGGCACTCGC-AATGTGTCTGGGGCAGAGTTCC---CAAGCGATTACACTGA-ACTTC 321
consensus_13248#1      AGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTT 532
consensus_13248#3      AGCGGAACTTTCCAAAACATTTCTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTT 273
                          ** ***  * **    * *    ** ** *     **    **** * * * * ** 

consensus_13248#2      TAGCGC---------AGGCAAAAG----AAGCTG------CTGAGTCAGCTTTTAAGGAT 313
consensus_13248#4      TAGCGCAGTGATTTCAGGCAAAAG----AAGCTG------CTGAGTCAGCTTTTAAGGAT 302
consensus_13248#0      TAGCGCAGTGATTTCAGGCAAAAG----AAGCTG------CTGAGTCAGCTTTTAAGGAT 371
consensus_13248#1      TAAGGGACTCAAAGGAGGAACACTTTTCAGGTTTGCATATTCCAGCCTTCTTCTGTTGCT 592
consensus_13248#3      TAAGGGACTCAAAGGAGGAACACTTTTCAGGTGT---TATCCTGGGC--CTTGGAAGGTT 328
                       **  *          *** * *      * *             * *  ***     * *

consensus_13248#2      --GGGAAGCAGCTATTGGAAA----TTGAGTTCCCTACAGCAGGACTACAATCTGTACCA 367
consensus_13248#4      --GGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCACTGTCTGACTTATTTTTTTATTC 360
consensus_13248#0      --GGGAAGCAGCTATTGGTAAAGCCTTAATCTGTCCGCTGTCTGACTTATTTTTTTATTC 429
consensus_13248#1      CTCCAAAATTAGCACCACTGACTCATGTCTATGCTTT-TGCATGAGCAAGTTTTGGTCTA 651
consensus_13248#3      CTGAGAAA----CATAGGTGGCAGTTTCTTCTGCTT---GCATGAACAAGAAGAGAT--- 378
                            **      *           *     *       *   **               

consensus_13248#2      GGTGACAGTGAAGGTGGAATTGAGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGT 427
consensus_13248#4      CTTTTTT-TGCACAAGNAATTGTGATGC-----AATGTATTTCANNAAATTGAGTTCCCT 414
consensus_13248#0      CTTTTTT-TGCACAAGAAATTGTGATGC-----AATGTATTTCAGGAAATTGAGTTCCCT 483
consensus_13248#1      GCTATAATTAATTAATTCATTGACTGATTATACAGTTTTATGTTGGCCAATCATTCTTGA 711
consensus_13248#3      GCCATCACTGAAGGA---AGTGGCC--CTCGACATCCTTCCTTCTGCCTAGAACTTTTCG 433
                               *         * **           *   *              * *     

consensus_13248#2      GATCGCTTT----GTCCCTGCTGAGAAAGCTACAAG-----AACCAGAATCTTCTTCCCT 478
consensus_13248#4      A-----------------CAGCAGGACTACAATCTG-----TACCAGGTTCTACATAGCT 452
consensus_13248#0      A-----------------CAGCAGGACTACAATCTG-----TACCAGGTTCTACATAGCT 521
consensus_13248#1      ATCAATGTACCAATGATATGGCACCCAAATTAGATGCCTTCAGCTGCCATACTTTTTGGA 771
consensus_13248#3      TGAGTCATTCCAAGCATAAGCCAAGAAAATGGAG-------AAGGGAAAAAGCCTAAAAG 486
                                                                                   

consensus_13248#2      GAGGCAAATGAAGTTTCATTTGCAAGACAATCTGCCTTTGAAGGATGTTCCCTGAAGCTA 538
consensus_13248#4      AACCTTTATGTATATTACCTTGTTATAAGATATTGGTCNNNAC----TCNNNTGGAA--A 506
consensus_13248#0      AACCTTTATGTATATTACCTTGTTATAAGATATTGGTCAGGAC----TCAGGTGGAA--A 575
consensus_13248#1      GGATCCGATTAACTGTGTTTGGCAAGATAATTAACTTAC-TTACAC-TCCAATAACCCTA 829
consensus_13248#3      AAAACAGGTTATTTCTCCCTA-TATGTTGATGGACTTTCGTTGTAC-ATAAGGAGAGCTA 544
                               *      *   *         **     *                      *

consensus_13248#2      GATTATCTAACAAAACCATCCCTATAAGAAGATCCAGGGTTTACAACAAAAGTCAAATGT 598
consensus_13248#4      GNNTACCATATAAGNNNCTATTTT-----ACTTTTAGG--TGACAGTGANNNNNGAATNG 559
consensus_13248#0      GGATACCATATAAGATTCTATTTT-----ACTTTTAGG--TGACAGTGAAGGTGGAATTG 628
consensus_13248#1      GTTGATTTTGTCTGTTACCCAGTTTGAATGATGCTCTAGTTAACATGACAACTTGAATGT 889
consensus_13248#3      G--GAACGGATGTATTGCTCTGATGTGTACATGCATCTGT--GCAT--CAAAGTGAATGC 598
                       *   *                                      **          ***  

consensus_13248#2      CAGACCGTG------TGCGTCAAANAAGANAAATTCCCGTGCCTATCCTTATTCCATGTC 652
consensus_13248#4      NNNNGACTG------NNN------------------------------------------ 571
consensus_13248#0      AGATGACTGGAAGCATGCTTCTTATAAGAGAATTCTGTGATCGCTTTGTCCCTGCTGAGA 688
consensus_13248#1      TGCGTTCTAT--CCTTTATTGTTATTATTGTCACCATCGCCAGCATGGCTATTGTTTCTT 947
consensus_13248#3      ATGGTTTGGTG-CCTTGATGGCGATCAATATTTGTCCTGCCAAAAAA------------- 644
                                                                                   

consensus_13248#2      AA--TAAATGCTGTTGGTTAAGACTTACAAGGAACCATTGTACCCCGACCACACGTATAT 710
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      AAGCTACAAGAACCAGAATCTTCTTCCCTGAGGCAAATGAAGTTTCATTTGCAAGACAAT 748
consensus_13248#1      GATATGTAATGCTTTGAAACAAATATATTCAGCTTGTTGTTACCATCAACTCACCATACC 1007
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      -TATCACGGCAACATATCATTAAGTGGTACACCCTCTACTCCAAGCTACTTTATTTACAT 769
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      CTGCCTTTGAAGGATGTTCCCTGAAGCTAGATTATCTAACAAAACCATCCCTATTTGAAG 808
consensus_13248#1      AAGATGTAGTTGCAGAAATTTAGTTTGGTATAAGTTGCAGTATGTTTATCTCATCAGGAG 1067
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      TTCTCAACGCAAANTATATCCNNTTGACCAGAACCTCTGGTTTCGGCGAGCTAAATGGTG 829
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      ATTTTGGT-TTTACAACAAAGGTCAAAATGTCAGACCGTGTGCGTCCAGAAGACGAGATA 867
consensus_13248#1      AAAAACATGATTGCATTCAGAACCTTTATGGAGCAAACTGTGGAGATTAAACGTGTGATT 1127
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      TTGCTTATAATCCGCGCCGCCCTCATATTCTAGACAAGCTTTAT---------------- 873
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TTCCTCGTGGCTTATCCCTATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTAC 927
consensus_13248#1      TTGCCGAAACTTTGTTGTCTGGCAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACA 1187
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      AAGGAAGCAATTGTTAGCACAGACCGAAAACTGATAATATTCAACGGGGAACTAGATCGA 987
consensus_13248#1      TAGGTGGCAGTTTCTTCTGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGG 1247
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      ATAAGAAGTGGGTTGCTAGTGACTTTCCTCAACAAAAGAGAAGCTGCGCTGATGATGTTT 1047
consensus_13248#1      CCCTCGACATCCTTCCTTCTGCCTAGAACTTTTCATGAGTCATTCCAAGCATAAGCCAAG 1307
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      GAAAATAGTATGCTTGTGAAATTCTAGTTAGCTATCATTTGTGTTGGTTCATTTCCTTGA 1107
consensus_13248#1      AAAATGGAGAAGGGAAAAAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGG 1367
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      CCAATCAAAGACTACCCTCCTTTCTTCTACCCAAAGCTAGCGGAACTTTCCAAAACATTT 1167
consensus_13248#1      ACTTTCGTTGTACATAAGGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCAT 1427
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      CTTCCAAAGCTGGAGACAGTTTATTATATTCACAATTTTAAGGGACTCAAAGGAGGAACA 1227
consensus_13248#1      CTGTGCATCAAAGTGAATGCATGGTTTGGTGCCTTGATGGCGATCAATATT--------- 1478
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      CTTTTCAGGTGTTATCCTGGGCCTTGGAAGGTTCTGAGAAACATAGGTGGCAGTTTCTTC 1287
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TGCTTGCATGAACAAGAAGAGATGCCATCACTGAAGGAAGTGGCCCTCGACATCCTTCCT 1347
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TCTGCCTAGAACTTTTCATGAGTCATTCCAAGCATAAGCCAAGAAAATGGAGAAGGGAAA 1407
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      AAGCCTAAAAGACTACAGGTTATTTCTCCCTATATGTTGATGGACTTTCGTTGTACATAA 1467
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      GGAGAGCTAGGAACGGATGTATTGCTCTGATGTGTACATGCATCTGTGCATCAAAGTGAA 1527
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TGCATGGTTTGGTGCCTTGATGGCGATCAATATTTGTCCTGCCAAAAATTAAGACTTTTT 1587
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TTTTTGTCGGGATGACCGAAGGAGGTCATCCAATGTTATTAAGATAGAGGAGGAAAAAAA 1647
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TGTTACAAGAAGGTTTTTCATCGACAACAAGTTGTCGAGGAAGGATGTGCACCAAAGCAC 1707
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      ACTCCCCGACACCACATGCCAACCGCACAAACACAAGCTACAAAGAAGAGAGCCGAACAC 1767
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      CGAACCGGCCGCCGCTATGCAAGGCAGGTCGTCGCCGGGCTTACAACAACACCACATAAC 1827
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      GGATATTCTAAAAAAGACAACGCCTTCACGAAAGTAGTGACGTCAAAAGACGCCGTCGTT 1887
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      GTCCGTCCAAAGAGACTAGACATGGTTTTCACCTAGAGATCCTCGTCGAAGGAGGAGGGT 1947
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      ACCTCGACAATGCCCCCAAGAGGGTTACCGCGCCTGAAGGCGTAGCCGCTGCCGACCAAG 2007
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TGTTTTGTTACCGTGCTTGAAGGCGTAGCCGCTGCCGGTCCAGTGAAACACTGGGCTAGG 2067
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      CTTTCGCCTCCTCTACCCCCGTCGTCGTGGTCCGTCGCCCACCAACTCTGATACCACCAG 2127
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      CCCAGTGTATGAGAAGTAAGGATCCGTTGGGTAAACTGAAATGCTAGTGTGTAAGAGAGA 2187
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TCGGATAATGGACAGCTCAGGATTTATGCAAATTTGAGTATTTTGGCCAGGATAAAAACA 2247
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      ------------------------------------------------------------
consensus_13248#4      ------------------------------------------------------------
consensus_13248#0      TCAAGAGGAAGAACCGGCCTTCCTTTCTGTTAATTGAGATCGAAGTGTTGCAAATTGCTT 2307
consensus_13248#1      ------------------------------------------------------------
consensus_13248#3      ------------------------------------------------------------
                                                                                   

consensus_13248#2      -----------------------------------------
consensus_13248#4      -----------------------------------------
consensus_13248#0      AGAAGAACGATACCACTAAGAACAAGTTAACAATTGATCTA 2348
consensus_13248#1      -----------------------------------------
consensus_13248#3      -----------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)