Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13258 cluster # 13258       Sequences # 12       consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13258#0 length = 2587 sequences # 4  
consensus_13258#1 length = 658 sequences # 1  
consensus_13258#2 length = 623 sequences # 1  
 consensus_13258#3 length = 579 sequences # 1  
consensus_13258#4 length = 537 sequences # 1  
consensus_13258#5 length = 522 sequences # 4  
consensusID : consensus_13258#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2587
fasta sequence 
                              [GAGCGCACACACACAATCACACATTGCACGCGCAGACGCAGCCACTGCTTCTTCTTCCTCCTCTTCTCCCAGGAAAGAGCTCACCTGACCTGACCACCTGAGGTTGTAGTTGCTGGTTTGCTTGCTAGCTTCGTCGTCTCCTCCTACCTGAGCTCAGCAATGGAGCCGCCCTTCTTCCTCCTCCTGCTGCTGCTCGTGGTCTCCTCCTCCTCCCCTTCCGCCGCCCTCCTCTCCGCCAAGGGCGTCTACAACGAAGTGCAAGCTCTGATTGTGATCAAGAACCTGCTCAAGGACCCCCATGGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCCTGCAGCTGGGCCATGATCACCTGCTCCCCGGATTTCCTCGTCACTGGCCTGGAAGCTCCAAGCCAGCATCTCTCTGGCCTGCTCTCACCAAGCATCGGCAACCTGACCAATCTTGAGACTGTTCTCCTGCAGAACAACAACATAACCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAGAACCTCAAGACGCTTGATCTCTCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTGGGCCACCTCGAGAGCCTCCAGTACTTGAGGCTCAACAACAACACCCTGTCTGGTCCATTCCCTTCTGCATCAGCTAACCTGTCACACCTTGTTTTCCTAGATTTGTCATATAACAACCTGAGTGGCCCGATTCCAGAATCATTGGCAAGAACTTACAACATAGTGGGGAATCCCCTCATCTGCGACGCCAACAGGGAGCAGGATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGCCTGAACGGCTCGCGGGGCGGCGCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTCGCCGTCGCGTTCGGCTCCACCGCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTCCTCTTCTGGTGGCGCCACCGCCGCAACCGGCAGATCCTCTTTGACGTCGACGAGCAGCAGATTGAGAACGTGAACCTGGGGAACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCGACGGAGGGGTTCAGCGGGAAGAACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCCCGACGGGACGCTGATGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGCCCAGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCTCTACGGGCTTCTGCATGACCGCCACCGAGCGCCTCCTAGTCTACCCCTTCATGTCCAACGGCAGCGTCGCCTCCCGCCTCAAAGCGAAGCCGGCGTTGGAGTGGGGGACGAGGAGGAGGATCGCGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCATCCA-CCGC-GACGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAGGCCGTCGTCGGCGACTTCGGGCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACCACGGCGGTGCGGGGCACCGTCGGCCACATCGCGCCGGAGTACCTGTCCACGGGGCAGTCGTCGGACCGGACCGACGTCTTCGGCTTCGGCATCCTGCTGCTGGAGCTCGTCACCGGCCAGACGGCGCTCGAGTTCGGCAAGTCGTCCAACCACAAGGGCGCCATGCTGGACTGGGTGAAGAAGATGCAGTCGGAGAAGAAGGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTACGACCGGGTGGAGGTGGAGGAGATGGTGCAGGTGGCTCTCCTCTGCACCCAGTACCTCCCCGCCCACCGCCCCCGCATGTCCGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGACCGCTGGGAGAAGGCCTCCGGCCACTCCACCGCCGCCGCCGACTCCCTCTCCCACTCCCACCGCACCTCAGACCCGGCGCCGCCCGCCGCCGACTTCGCCGCCGCCTTCGGCCGCTGCTTCTCCGACCTCACCGACGACTCCTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGATAACACCACCATGATCGAGTAGCTGTGGTGTGTGGCTCTTCTTGTACAGCATGCTTGCATGGAGCTCTCTGTCTTTCTGTCTGAATATTAATGTAGCTAGCTAGGTTGGGAAATACTTCCCTGTTTCATATTATAAAACTTTTTAGCATTACCCATACATTCATATATATATGTTAATAAATCTAGATATATATGTATGCCTAGATTTATTAACATCTATATGAATGAATGTGGGCAATGCTAGAAAGTTTTATAACCTGAAATGGAGGTAGTAATAATTATATTTTACTAAGGTAATTACTAATTAGTGATGCGTATATATTTATATCATTTTAGATGAACTGTACAAACACAAGAGGAGAGGACAAGGACTTGTACTTTTCCGTGTCTCCATATATACTTGATGTTAATAATAAAAAAGTGTTATTATTGTAGGTTTAGTTATTAGTTGAAACAATATATATGACTGATTGTAAGTGAGATGCAGTAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK066417             [GAGCGCACACACACAATCACACATTGCACGCGCAGACGCAGCCACTGCTTCTTCTTCCTCCTCTTCTCCCAGGAAAGAGCTCACCTGACCTGACCACCTGAGGTTGTAGTTGCTGGTTTGCTTGCTAGCTTCGTCGTCTCCTCCTACCTGAGCTCAGCAATGGAGCCGCCCTTCTTCCTCCTCCTGCTGCTGCTCGTGGTCTCCTCCTCCTCCCCTTCCGCCGCCCTCCTCTCCGCCAAGGGCGTCTACAACGAAGTGCAAGCTCTGATTGTGATCAAGAACCTGCTCAAGGACCCCCATGGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCCTGCAGCTGGGCCATGATCACCTGCTCCCCGGATTTCCTCGTCACTGGCCTGGAAGCTCCAAGCCAGCATCTCTCTGGCCTGCTCTCACCAAGCATCGGCAACCTGACCAATCTTGAGACTGTTCTCCTGCAGAACAACAACATAACCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAGAACCTCAAGACGCTTGATCTCTCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTGGGCCACCTCGAGAGCCTCCAGTACTTGAGGCTCAACAACAACACCCTGTCTGGTCCATTCCCTTCTGCATCAGCTAACCTGTCACACCTTGTTTTCCTAGATTTGTCATATAACAACCTGAGTGGCCCGATTCCAGAATCATTGGCAAGAACTTACAACATAGTGGGGAATCCCCTCATCTGCGACGCCAACAGGGAGCAGGATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGCCTGAACGGCTCGCGGGGCGGCGCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTCGCCGTCGCGTTCGGCTCCACCGCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTCCTCTTCTGGTGGCGCCACCGCCGCAACCGGCAGATCCTCTTTGACGTCGACGAGCAGCAGATTGAGAACGTGAACCTGGGGAACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCGACGGAGGGGTTCAGCGGGAAGAACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCCCGACGGGACGCTGATGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGCCCAGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCTCTACGGGCTTCTGCATGACCGCCACCGAGCGCCTCCTAGTCTACCCCTTCATGTCCAACGGCAGCGTCGCCTCCCGCCTCAAAGCGAAGCCGGCGTTGGAGTGGGGGACGAGGAGGAGGATCGCGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCATCCA CCGC GACGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAGGCCGTCGTCGGCGACTTCGGGCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACCACGGCGGTGCGGGGCACCGTCGGCCACATCGCGCCGGAGTACCTGTCCACGGGGCAGTCGTCGGACCGGACCGACGTCTTCGGCTTCGGCATCCTGCTGCTGGAGCTCGTCACCGGCCAGACGGCGCTCGAGTTCGGCAAGTCGTCCAACCACAAGGGCGCCATGCTGGACTGGGTGAAGAAGATGCAGTCGGAGAAGAAGGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTACGACCGGGTGGAGGTGGAGGAGATGGTGCAGGTGGCTCTCCTCTGCACCCAGTACCTCCCCGCCCACCGCCCCCGCATGTCCGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGACCGCTGGGAGAAGGCCTCCGGCCACTCCACCGCCGCCGCCGACTCCCTCTCCCACTCCCACCGCACCTCAGACCCGGCGCCGCCCGCCGCCGACTTCGCCGCCGCCTTCGGCCGCTGCTTCTCCGACCTCACCGACGACTCCTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGATAACACCACCATGATCGAGTAGCTGTGGTGTGTGGCTCTTCTTGTACAGCATGCTTGCATGGAGCTCTCTGTCTTTCTGTCTGAATATTAATGTAGCTAGCTAGGTTGGGAAATACTTCCCTGTTTCATATTATAAAACTTTTTAGCATTACCCATACATTCATATATATATGTTAATAAATCTAGATATATATGTATGCCTAGATTTATTAACATCTATATGAATGAATGTGGGCAATGCTAGAAAGTTTTATAACCTGAAATGGAGGTAGTAATAATTATATTTTACTAAGGTAATTACTAATTAGTGATGCGTATATATTTATATCATTTTAGATGAACTGTACAAACACAAGAGGAGAGGACAAGGACTTGTACTTTTCCGTGTCTCCATATATACT                                                                                                          ]
[+] EMBL AU056335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCCCGACGGGACGCTGGTGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGCCCAGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCTCTAC GGCTTCTGCATGACCGCCACCGAGCGCCTCCTAGTCTACCCCTTCATGTCCAACGGCAGCGTCGCCTCCCGCCTCAAAGCGAA NCGGCGTTGGAGTGGGGGACGAGGAGGAGGATCGCGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCATCCANCGGCGGACGTCAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU056336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               nAAATACTTCCCTGTTTCATATTATANAACTTTTTAGCATTACCCATACATTCATATATNTATGTTAATANATCTAGATATATATGTATGCCTAGATTTATTAACATCTATATGAATGAATGTGGGCAATGCTAGNAAGTTTTATANCCTGAAATGGAGGTAGTAATAATTATATTTTACTAAGGTAATTACTAATTAGTGATGCGTATATATTTATATCATTTTAGATGAACTGTACAAACACAAGAGGAGAGGACAAGGACTTGTACTTTTCCGTGTCTCCATATATACTTGATGTTAATAATAAAAA                                                                                        ]
[+] EMBL CA999439             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TACTAAGGTAATTACTAATTAGTGATGCGTATATATTTATATCATTTTAGATGAACTGTACAAACACAAGAGGAGAGGACAAGGACTTGTACTTTTCCGTGTCTCCATATATACTTGATGTTAATAATAGTAGAGTGTTATTATTGTAGGTTTAGTTATTAGTTGAAACAATATATATGACTGATTGTAAGTGAGATGCAGTAAAAAAAAAAAAAAAAAAA]




>consensus_13258#0
GAGCGCACACACACAATCACACATTGCACGCGCAGACGCAGCCACTGCTTCTTCTTCCTC
CTCTTCTCCCAGGAAAGAGCTCACCTGACCTGACCACCTGAGGTTGTAGTTGCTGGTTTG
CTTGCTAGCTTCGTCGTCTCCTCCTACCTGAGCTCAGCAATGGAGCCGCCCTTCTTCCTC
CTCCTGCTGCTGCTCGTGGTCTCCTCCTCCTCCCCTTCCGCCGCCCTCCTCTCCGCCAAG
GGCGTCTACAACGAAGTGCAAGCTCTGATTGTGATCAAGAACCTGCTCAAGGACCCCCAT
GGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCCTGCAGCTGGGCCATGATCACC
TGCTCCCCGGATTTCCTCGTCACTGGCCTGGAAGCTCCAAGCCAGCATCTCTCTGGCCTG
CTCTCACCAAGCATCGGCAACCTGACCAATCTTGAGACTGTTCTCCTGCAGAACAACAAC
ATAACCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAGAACCTCAAGACGCTTGATCTC
TCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTGGGCCACCTCGAGAGCCTCCAG
TACTTGAGGCTCAACAACAACACCCTGTCTGGTCCATTCCCTTCTGCATCAGCTAACCTG
TCACACCTTGTTTTCCTAGATTTGTCATATAACAACCTGAGTGGCCCGATTCCAGAATCA
TTGGCAAGAACTTACAACATAGTGGGGAATCCCCTCATCTGCGACGCCAACAGGGAGCAG
GATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGCCTGAACGGCTCGCGGGGCGGC
GCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTCGCCGTCGCGTTCGGCTCCACC
GCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTCCTCTTCTGGTGGCGCCACCGC
CGCAACCGGCAGATCCTCTTTGACGTCGACGAGCAGCAGATTGAGAACGTGAACCTGGGG
AACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCGACGGAGGGGTTCAGCGGGAAG
AACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCCCGACGGGACG
CTGATGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGCCCAGTTCCAG
ACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCTCTACGGGCTT
CTGCATGACCGCCACCGAGCGCCTCCTAGTCTACCCCTTCATGTCCAACGGCAGCGTCGC
CTCCCGCCTCAAAGCGAAGCCGGCGTTGGAGTGGGGGACGAGGAGGAGGATCGCGGTGGG
GGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCATCCACCGCGA
CGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAGGCCGTCGTCGGCGACTTCGG
GCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACCACGGCGGTGCGGGGCACCGT
CGGCCACATCGCGCCGGAGTACCTGTCCACGGGGCAGTCGTCGGACCGGACCGACGTCTT
CGGCTTCGGCATCCTGCTGCTGGAGCTCGTCACCGGCCAGACGGCGCTCGAGTTCGGCAA
GTCGTCCAACCACAAGGGCGCCATGCTGGACTGGGTGAAGAAGATGCAGTCGGAGAAGAA
GGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTACGACCGGGTGGAGGTGGAGGA
GATGGTGCAGGTGGCTCTCCTCTGCACCCAGTACCTCCCCGCCCACCGCCCCCGCATGTC
CGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGACCGCTGGGAGAAGGCCTCCGG
CCACTCCACCGCCGCCGCCGACTCCCTCTCCCACTCCCACCGCACCTCAGACCCGGCGCC
GCCCGCCGCCGACTTCGCCGCCGCCTTCGGCCGCTGCTTCTCCGACCTCACCGACGACTC
CTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGATAACACCACCATGATCGAGT
AGCTGTGGTGTGTGGCTCTTCTTGTACAGCATGCTTGCATGGAGCTCTCTGTCTTTCTGT
CTGAATATTAATGTAGCTAGCTAGGTTGGGAAATACTTCCCTGTTTCATATTATAAAACT
TTTTAGCATTACCCATACATTCATATATATATGTTAATAAATCTAGATATATATGTATGC
CTAGATTTATTAACATCTATATGAATGAATGTGGGCAATGCTAGAAAGTTTTATAACCTG
AAATGGAGGTAGTAATAATTATATTTTACTAAGGTAATTACTAATTAGTGATGCGTATAT
ATTTATATCATTTTAGATGAACTGTACAAACACAAGAGGAGAGGACAAGGACTTGTACTT
TTCCGTGTCTCCATATATACTTGATGTTAATAATAAAAAAGTGTTATTATTGTAGGTTTA
GTTATTAGTTGAAACAATATATATGACTGATTGTAAGTGAGATGCAGTAAAAAAAAAAAA
AAAAAAA

consensusID : consensus_13258#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 658
fasta sequence 
                              [CATGGACTGAACGAGTAGAAACTTCCACCCAAAGAAAGAGCTCACCTTGATTACCCTTACCCTCCTCCCACTAATCACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAATGGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGTGAGTGCAGCTCCACAGTGCAAACTGCAAACTGCAAAGCCTTTGAATGCTGCCTGCTCCCCTTTTTAGACAATTTTCAAGCACTGCTGCACTGTTCATA]

[+] EMBL CF294944             [CATGGACTGAACGAGTAGAAACTTCCACCCAAAGAAAGAGCTCACCTTGATTACCCTTACCCTCCTCCCACTAATCACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAATGGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGTGAGTGCAGCTCCACAGTGCAAACTGCAAACTGCAAAGCCTTTGAATGCTGCCTGCTCCCCTTTTTAGACAATTTTCAAGCACTGCTGCACTGTTCATA]




>consensus_13258#1
CATGGACTGAACGAGTAGAAACTTCCACCCAAAGAAAGAGCTCACCTTGATTACCCTTAC
CCTCCTCCCACTAATCACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAAT
GGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCG
CCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCT
CGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTG
GGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCA
TCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCT
GCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAA
GAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCT
CAAGAGCCTCCAGTACTTGTGAGTGCAGCTCCACAGTGCAAACTGCAAACTGCAAAGCCT
TTGAATGCTGCCTGCTCCCCTTTTTAGACAATTTTCAAGCACTGCTGCACTGTTCATA

consensusID : consensus_13258#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 623
fasta sequence 
                              [GGAGTAGAAACTCTCCTCTTCCACCCAAAGAAAGAGCTCACCTTGATTACCCTTACCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGAGTGGTCCGATACCGGCATCATTGGCAAGAAGATCAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGATTG]

[+] EMBL CF296820             [GGAGTAGAAACTCTCCTCTTCCACCCAAAGAAAGAGCTCACCTTGATTACCCTTACCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGAGTGGTCCGATACCGGCATCATTGGCAAGAAGATCAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGATTG]




>consensus_13258#2
GGAGTAGAAACTCTCCTCTTCCACCCAAAGAAAGAGCTCACCTTGATTACCCTTACCCTC
CTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGAT
CGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTC
CGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCT
GGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAA
TCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGG
CAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCC
CTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTC
TGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTA
CAACAACCTGAGTGGTCCGATACCGGCATCATTGGCAAGAAGATCAACGTAGTGGGGAAT
CCCCTCATCTGCGAGCAAGATTG

consensusID : consensus_13258#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 579
fasta sequence 
                              [TCACCTTGATTACCCTTACCCTCCTCCCACTAATCACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAATGGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACC]

[+] EMBL CF323801             [TCACCTTGATTACCCTTACCCTCCTCCCACTAATCACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAATGGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACC]




>consensus_13258#3
TCACCTTGATTACCCTTACCCTCCTCCCACTAATCACGCTAATTTGCTAGCTCGACTCCT
AGCTACCTTCATCAGCAATGGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCT
CCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGA
TCGAGATCAAGAACCTGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACT
CCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCC
TGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCA
ATCTTGAGACTATTCTCCTGCAGAACAACAACATAAGTGGGCCAATCCCAGCAGAGATTG
GCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCC
CCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGT
CTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACC

consensusID : consensus_13258#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 537
fasta sequence 
                              [ACTGAAGGAGTAGAAAACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAATGGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCCGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATNAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTT]

[+] EMBL CF310299             [ACTGAAGGAGTAGAAAACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAATGGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCCGCTCGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAACAACATNAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTT]




>consensus_13258#4
ACTGAAGGAGTAGAAAACGCTAATTTGCTAGCTCGACTCCTAGCTACCTTCATCAGCAAT
GGAGGCGCCTTTCTTCTTCTTCCTCCTCCTCCTAGTCTCCTCCTCCCCTTCCACCGCCCG
CCTCTCCGCCTATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCCGCT
CGAGGACCCCCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTG
GGCCTTGATCACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCA
TCTCTCTGGCCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCT
GCAGAACAACAACATNAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCA
AGAGACTTGATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACC
TCAAGAGCCTCCAGTACTTGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTT

consensusID : consensus_13258#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 522
fasta sequence 
                              [ATTGCTCTCTTGTAACTTTGATCAGGAGACTGAACAAC-AACACCCTGTCTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGAGTGGTCCGATACCGGCATCATTGGCAAGAAGATACAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGATTGCTACAGGATGGCGCCGATGGCGATGTTCCATTAGATCAAGAAGATTTTACTGTTCCGTCTGTTCTTCAAATGCTGCTTACTGAAAGAGCAAATGGAGAACGCCGTCTCTAAATAATTACTACCTCTATCCTTTAATATTTGACGTTGGTTAGCTCAATTTCGAACTAAGCAACGTCAAACATTAAAAAACATAAAAAAAATGTGGGACTACTTACTATTTGATGTTGCTTTTATTAGTTTGATGTAAGCTCCTAGAGTGAGCTTACTTTGAAATGTACTATTATGTAACACTACTCAATAAAGAGTCTTTCTGGACTAAAAAAAAAAAA]

[-] EMBL CF294945             [ATTGCTCTCTTGTAACTTTGATCAGGAGACTGAACAAC AACACCCTGTCTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGAGTGGTCCGATACCGGCATCATTGGCAAGAAGATACAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGATTGCTACAGGATGGCGCCGATGGCGATGTTCCATTAGATCAAGAAGATTTTACTGTTCCGTCTGTTCTTCAAATGCTGCTTACTGAAAGAGCAAATGGAGAACGCCGTCTCTAAATAATTACTACCTCTATCCTTTAATATTTGACGTTGGTTAGATCAATTTCGAACTAAACAACGTCAAACATTAAAAAACATAAAAAAAATGTGGGACTACTTACTATTTGATGTTGCTTTTATTAGTTTGATGTAAGCTCCTAGAGTGAGCTTACTTTGAAATGTACTATTATGTAACAC                                      ]
[-] EMBL CF310298             [                        tGAGACTGAACAACAAACACCCTGTCTGGTCCAATTCCTTCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGAGTGGTCCGATACCGGCATCATTGGCAAGAAGATACAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGATTGCTACAGGATGGCGCCGATGGCGATGTTCCATTAGATCAAGAAGATTTTACTGTTCCGTCTGTTCTTCAAATGCTGCTTACTGAAAGAGCAAATGGAGAACGCCGTCTCTAAATAATTACTACCTCTATCCTTTAATATTTGACGTTGGTTAGCTCAATTTCGAACTAAGCAACGTCAAACATTAAAAAACATAAAAAAAATGTGGGACTACTTACTATTTGATGTTGCTTTTATTAGTTTGATGTAAGCTCCTAGAGTGAGCTTACTTTGAAATGTACTATTATGTAACACTACTCAATAAAGAGTCTTTCTGGACTAAAAAAAAAAAA]
[-] EMBL CF296821             [                                                               TCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGAGTGGTCCGATACCGGCATCATTGGCAAGAAGATACAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGATTGCTACAGGATGGCGCCGATGGCGATGTTCCATTAGATCAAGAAGATTTTACTGTTCCGTCTGTTCTTCAAATGCTGCTTACTGAAAGAGCAAATGGAGAACGCCGTCTCTAAATAATTACTACCTCTATCCTTTAATATTTGACGTTGGTTAGCTCAATTTCGAACTAAGCAACGTCAAACATTAAAAAACATAAAAAAAATGTGGGACTACTTACTATTTGATGTTGCTTTTATTAGTTTGATGTAAGCTCCTAGAGTGAGCTTACTTTGAAATGTACTATTATGTAACACTACTCAATAAAGAGTCTTTCTGGACTAAAAAA      ]
[+] EMBL BI812608             [                                                                                                                                                                                                              GCCGATGGCGATGTTCCATTAGATCAAGAAGATTTTACTGTTCCGTCTGTTCTTCAAATGCTGCTTACTGAAAGAGCAAATGGAGAAC CCGTCTCTAAATAATTACTACCTCTATCCTTTAATATTTGACGTTGGTTAGCTCAATTTCGAACTAAGCAACGTCAAACATTAAAAAACATAAAAAAAATGTGGGACTACTTACTATTTGATGTTGCTTTTATTAGTTTGATGTAAGCTCCTAGAGTGAGCTTACTTTGAAATGTACTATTATGTAACACTACTCAATAAAGAGTCTTTCTGGACTAAAAAAA     ]




>consensus_13258#5
ATTGCTCTCTTGTAACTTTGATCAGGAGACTGAACAACAACACCCTGTCTGGTCCAATTC
CTTCTGCATCAGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGA
GTGGTCCGATACCGGCATCATTGGCAAGAAGATACAACGTAGTGGGGAATCCCCTCATCT
GCGAGCAAGATTGCTACAGGATGGCGCCGATGGCGATGTTCCATTAGATCAAGAAGATTT
TACTGTTCCGTCTGTTCTTCAAATGCTGCTTACTGAAAGAGCAAATGGAGAACGCCGTCT
CTAAATAATTACTACCTCTATCCTTTAATATTTGACGTTGGTTAGCTCAATTTCGAACTA
AGCAACGTCAAACATTAAAAAACATAAAAAAAATGTGGGACTACTTACTATTTGATGTTG
CTTTTATTAGTTTGATGTAAGCTCCTAGAGTGAGCTTACTTTGAAATGTACTATTATGTA
ACACTACTCAATAAAGAGTCTTTCTGGACTAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13258#1      ---------------------------------------CATGGACTGAACGAGTAGAAA 21
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GAGCGCACACACACAATCACACATTGCACGCGCAGACGCAGCCACTGCTTCTTCTTCCTC 60
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      CTTCCACCCAAAGAAAGAGCTCACCTTGATTACCC---TTACCCTCCTCCCACTAATCAC 78
consensus_13258#4      ------------------------------------------ACTGAAGGAGTAGAAAAC 18
consensus_13258#3      --------------------TCACCTTGATTACCC---TTACCCTCCTCCCACTAATCAC 37
consensus_13258#0      CTCTTCTCCCAGGAAAGAGCTCACCTGACCTGACCACCTGAGGTTGTAGTTGCTGGTT-T 119
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      -------------------------------------ATTGCTCTCTTGTAACTTTGATC 23
                                                                                   

consensus_13258#1      GCTAATTTGCTAGCTCGACTCCTAGCTACCTTCA-TCAGC-AATGGAGGCGCCTTTCTTC 136
consensus_13258#4      GCTAATTTGCTAGCTCGACTCCTAGCTACCTTCA-TCAGC-AATGGAGGCGCCTTTCTTC 76
consensus_13258#3      GCTAATTTGCTAGCTCGACTCCTAGCTACCTTCA-TCAGC-AATGGAGGCGCCTTTCTTC 95
consensus_13258#0      GCTTGCTAGCTTCGTCGTCTCCTC-CTACCTGAGCTCAGC-AATGGAGCCGCCCTTCTTC 177
consensus_13258#2      ---------------GGAGTAGAAACTCTCCTCTTCCACCCAAAGAAAGAGCTCACCTTG 45
consensus_13258#5      AGGAGACTGAACAACAACACCCTGTCTGGTCCAATTCCTT---CTGCATCAGCTAACCTG 80
                                                **         *                   * * 

consensus_13258#1      TTCTTCCTCCTCCTCCTAGT------CTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCC 190
consensus_13258#4      TTCTTCCTCCTCCTCCTAGT------CTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCC 130
consensus_13258#3      TTCTTCCTCCTCCTCCTAGT------CTCCTCCTCCCCTTCCACCGCCCGCCTCTCCGCC 149
consensus_13258#0      CTCCTCCTGCTGCTGCTCGTGGTCTCCTCCTCCTCCCCTTCCGCCGCCCTCCTCTCCGCC 237
consensus_13258#2      ATTACCCTTAC-----------------CCTCCTCCCCTTCCACCGCCCGCCTCTCCGCC 88
consensus_13258#5      TCGCACCTTGTTTTCCTAGA-------TTTGTCTTACAACAACCTGAGTGGTCCGATACC 133
                            ***                        **  *      * *       *    **

consensus_13258#1      TATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCG-AGGACCC 249
consensus_13258#4      TATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCCGCTCG-AGGACCC 189
consensus_13258#3      TATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCG-AGGACCC 208
consensus_13258#0      AAGGGCGTCTACAACGAAGTGCAAGCTCTGATTGTGATCAAGAACCTGCTCA-AGGACCC 296
consensus_13258#2      TATGGCGTCAACACCGAAGTGCGAGCTCTGATCGAGATCAAGAACCTGCTCG-AGGACCC 147
consensus_13258#5      GGCATCATTGGCAAGAAGATACAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGATTG 193
                            * *   **   *  * * *  *      *    *    * * **    * **   

consensus_13258#1      CCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGAT 309
consensus_13258#4      CCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGAT 249
consensus_13258#3      CCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGAT 268
consensus_13258#0      CCATGGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCCTGCAGCTGGGCCATGAT 356
consensus_13258#2      CCATGGCGTGCTCAAGAGCTGGGATCAGAACTCCGTCGATCCCTGCAGCTGGGCCTTGAT 207
consensus_13258#5      CTACAGGATG-----GCGCCGATGGCGATGTTCCATTAGATCAAGAAGATTTTACTGTTC 248
                       * *  *  **     * ** *    *     *** *     *  * ** *    *     

consensus_13258#1      CACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGG 369
consensus_13258#4      CACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGG 309
consensus_13258#3      CACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGG 328
consensus_13258#0      CACCTGCTCCCCGGATTTCCTCGTCACTGGCCTGGAAGCTCCAAGCCAGCATCTCTCTGG 416
consensus_13258#2      CACCTGCTCCCCGGACTCCCTCGTCACTACCCTGGAAGCTCCAGGCCAGCATCTCTCTGG 267
consensus_13258#5      CGTCTGTTCTTCAAATG--CTGCTTACTGAAAGAGCAAATGGAGAACGCCGTCTCTAAAT 306
                       *  *** **  *  *    **  * ***      * *  *  *   *  * *****    

consensus_13258#1      CCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAA 429
consensus_13258#4      CCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAA 369
consensus_13258#3      CCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAA 388
consensus_13258#0      CCTGCTCTCACCAAGCATCGGCAACCTGACCAATCTTGAGACTGTTCTCCTGCAGAACAA 476
consensus_13258#2      CCTGCTCGCGCCAAGCATCGGCGACCTGACCAATCTTGAGACTATTCTCCTGCAGAACAA 327
consensus_13258#5      AATTACTACCTCTATCCTTTAATATTTGAC-GTTGGTTAGCTCAATTTCGAACTAAGCAA 365
                         *     *  * * * *     *  ****   *  * **     * **   *  * ***

consensus_13258#1      CAACATAA-GTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTG 488
consensus_13258#4      CAACATNAAGTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTG 429
consensus_13258#3      CAACATAA-GTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTG 447
consensus_13258#0      CAACATAA-CCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAGAACCTCAAGACGCTTG 535
consensus_13258#2      CAACATAA-GTGGGCCAATCCCAGCAGAGATTGGCAAGCTGGCAAACCTCAAGAGACTTG 386
consensus_13258#5      CGTCA-----------AACATTAAAAAACATAAAAAAAATGTGGGACTACTTACTATTTG 414
                       *  **           **    *  * * **    *   **    **  *       ***

consensus_13258#1      ATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCC 548
consensus_13258#4      ATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCC 489
consensus_13258#3      ATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCC 507
consensus_13258#0      ATCTCTCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTGGGCCACCTCGAGAGCC 595
consensus_13258#2      ATCTCTCCAGCAACCAATTCCATGGTGAAATCCCCTGCTCTGTGGGCCACCTCAAGAGCC 446
consensus_13258#5      ATGTTGCTT-TTATTAGTT---TGATGTAAGCTCCTAGAGTG-AGCTTACTTTGAAATGT 469
                       ** *  *     *    **   **  * ** * **     **  *   ** *  * *   

consensus_13258#1      TCCAGTACTTGTGAGTGCAGCTCCACAGTGCAAACTGCAAACTGCAAAGCCTTTGAATGC 608
consensus_13258#4      TCCAGTACTTGAGACTGAA---CAACAACACC--CTGTCTGGTCCAATTCCTT------- 537
consensus_13258#3      TCCAGTACTTGAGACTGAA---CAACAACACC--CTGTCTGGTCCAATTCCTTCTGCATC 562
consensus_13258#0      TCCAGTACTTGAGGCTCAA---CAACAACACC--CTGTCTGGTCCATTCCCTTCTGCATC 650
consensus_13258#2      TCCAGTACTTGAGACTGAA---CAACAACACC--CTGTCTGGTCCAATTCCTTCTGCATC 501
consensus_13258#5      ACTATTATGTAACACTACT---CAATAAAGAGT-CTTTCTGGACTAAAAAAAAAAAA--- 522
                        * * **  *     *      * * *       **         *              

consensus_13258#1      TGCCTGCTCCCCTTTTTAGACAATTTTCAAGCACTGCTGCACTGTTCATA---------- 658
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      AGCTAACCTGTCGCACC------------------------------------------- 579
consensus_13258#0      AGCTAACCTGTCACACCTTGTTTTCCTAGATTTGTCATATAACAACCTGAGTGGCCCGAT 710
consensus_13258#2      AGCTAACCTGTCGCACCTTGTTTTCCTAGATTTGTCTTACAACAACCTGAGTGGTCCGAT 561
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      TCCAGAATCATTGGCAAGAACTTACAACATAGTGGGGAATCCCCTCATCTGCGACGCCAA 770
consensus_13258#2      ACCGGCATCATTGGCAAGAAGAT-CAACGTAGTGGGGAATCCCCTCATCTGCGAGCAAGA 620
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CAGGGAGCAGGATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGCCTGAACGGCTC 830
consensus_13258#2      TTG--------------------------------------------------------- 623
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GCGGGGCGGCGCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTCGCCGTCGCGTT 890
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CGGCTCCACCGCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTCCTCTTCTGGTG 950
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GCGCCACCGCCGCAACCGGCAGATCCTCTTTGACGTCGACGAGCAGCAGATTGAGAACGT 1010
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GAACCTGGGGAACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCGACGGAGGGGTT 1070
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CAGCGGGAAGAACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCC 1130
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CGACGGGACGCTGATGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGC 1190
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CCAGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCT 1250
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CTACGGGCTTCTGCATGACCGCCACCGAGCGCCTCCTAGTCTACCCCTTCATGTCCAACG 1310
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GCAGCGTCGCCTCCCGCCTCAAAGCGAAGCCGGCGTTGGAGTGGGGGACGAGGAGGAGGA 1370
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      TCGCGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCA 1430
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      TCCACCGCGACGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAGGCCGTCGTCG 1490
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GCGACTTCGGGCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACCACGGCGGTGC 1550
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GGGGCACCGTCGGCCACATCGCGCCGGAGTACCTGTCCACGGGGCAGTCGTCGGACCGGA 1610
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CCGACGTCTTCGGCTTCGGCATCCTGCTGCTGGAGCTCGTCACCGGCCAGACGGCGCTCG 1670
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      AGTTCGGCAAGTCGTCCAACCACAAGGGCGCCATGCTGGACTGGGTGAAGAAGATGCAGT 1730
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CGGAGAAGAAGGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTACGACCGGGTGG 1790
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      AGGTGGAGGAGATGGTGCAGGTGGCTCTCCTCTGCACCCAGTACCTCCCCGCCCACCGCC 1850
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CCCGCATGTCCGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGACCGCTGGGAGA 1910
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      AGGCCTCCGGCCACTCCACCGCCGCCGCCGACTCCCTCTCCCACTCCCACCGCACCTCAG 1970
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      ACCCGGCGCCGCCCGCCGCCGACTTCGCCGCCGCCTTCGGCCGCTGCTTCTCCGACCTCA 2030
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      CCGACGACTCCTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGATAACACCACC 2090
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      ATGATCGAGTAGCTGTGGTGTGTGGCTCTTCTTGTACAGCATGCTTGCATGGAGCTCTCT 2150
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      GTCTTTCTGTCTGAATATTAATGTAGCTAGCTAGGTTGGGAAATACTTCCCTGTTTCATA 2210
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      TTATAAAACTTTTTAGCATTACCCATACATTCATATATATATGTTAATAAATCTAGATAT 2270
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      ATATGTATGCCTAGATTTATTAACATCTATATGAATGAATGTGGGCAATGCTAGAAAGTT 2330
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      TTATAACCTGAAATGGAGGTAGTAATAATTATATTTTACTAAGGTAATTACTAATTAGTG 2390
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      ATGCGTATATATTTATATCATTTTAGATGAACTGTACAAACACAAGAGGAGAGGACAAGG 2450
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      ACTTGTACTTTTCCGTGTCTCCATATATACTTGATGTTAATAATAAAAAAGTGTTATTAT 2510
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      ------------------------------------------------------------
consensus_13258#4      ------------------------------------------------------------
consensus_13258#3      ------------------------------------------------------------
consensus_13258#0      TGTAGGTTTAGTTATTAGTTGAAACAATATATATGACTGATTGTAAGTGAGATGCAGTAA 2570
consensus_13258#2      ------------------------------------------------------------
consensus_13258#5      ------------------------------------------------------------
                                                                                   

consensus_13258#1      -----------------
consensus_13258#4      -----------------
consensus_13258#3      -----------------
consensus_13258#0      AAAAAAAAAAAAAAAAA 2587
consensus_13258#2      -----------------
consensus_13258#5      -----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)