These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13275#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2046 fasta sequence [AGCTCTGGCCGTAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCGAGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCGGGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGGAGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG---TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCAGCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGTCATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGCACAGAAAAATAGACATTGCAGCAGCATGTGTTCTTCTTCAAAAAAAA] [+] EMBL CB673558 [AGCTCTGGCCGTAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCGAGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCGGGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGGAGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTC ] [+] EMBL AK119594 [ ggaAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCGAGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCGGGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGGAGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCAGCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGTCATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGC ] [+] EMBL CB648582 [ AATCGCAGCGCGAGAATAACCCCAACCGAAGCGGCAGCGGGAGCAGCATCATCGGCGGATACAATAAGCAAGGGGAGCACCAGCCACGGGCAGGAGAGGAGAGTGCGCATGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCCCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCGCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGTCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGCGAGGTGAGACC ] [+] EMBL AK121731 [ AGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCACGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCAGCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGTCATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGCACAGAAAAATAG ] [+] EMBL CB646665 [ GCGGGATGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCCTCGCGTGGG TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACAACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACTAGGCCCATCAGCCGCGGCGGCGGCTGTGGGAGGAAGAGGTGGCCCCCCGGAGGAAAGGGGAGCGCCATGCTGTGGGCGGAGCGGGTGTCCGGGTTCTTCTCCGCCACCATGGAGATGGTGGTGCTGTCCCCGTCTCTGCAATCCT ] [+] EMBL CB643564 [ GCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGA ] [+] EMBL CB640533 [ CTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGGTTTTTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACAACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCACCAACCGCGGCGGCGGCGGTGGGAGGAAAAGGTGGCCGCCCGG ] [+] EMBL AK064068 [ CCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGCACAGAAAAATAGACA ] [-] EMBL CB673559 [ CCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCTCCGACAGGTTCTGGTCGGACAAGCAGTTCTCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGAGGAAATGCCTTGTGTTAGATTGTTCTTGTTGGTA ] [-] EMBL CB648583 [ GGTGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTGTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTGTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTCGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATGGGTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCttaaaggt ] [+] EMBL AU181128 [ cCTNAANTCATCACCACCATTACCTGTTCAAACACCTACATGTNTAATTTTTCNTCANTTCNTCTTTCTTTTGTTCTGTNCGATTAAATGCCTTGTGTTAGANTGNTCTTGTTGGTANTAGTGATCTCTTCTTCCACTTTTTTTGANCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAAGCTTGCAGCCTCAGCATCATCATAAATNAAAAGCACAGAAAAATAGACATTGCAGCAGCATGTGTTCTTCTTCAAAAAAAA] consensusID : consensus_13275#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence [GCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGGGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTTTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTTTTTTCCTTCTTTCGCCGACCCCGTACAAATTTTTGAGTTTTCAATTTTTTTCCCCCATTACCTGTTCAAACCCCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATCCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCCCTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG] [-] EMBL CB643565 [GCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGGGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTTTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTTTTTTCCTTCTTTCGCCGACCCCGTACAAATTTTTGAGTTTTCAATTTTTTTCCCCCATTACCTGTTCAAACCCCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATCCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCCCTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13275#0 AGCTCTGGCCGTAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCG 60 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 AGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCG 120 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 GGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGG 180 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 AGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCC 240 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 GCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCT 300 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGG 360 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTC 420 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 GTCGCGTGGGTTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGC 480 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 GCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAG 540 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCAT 600 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 GCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTC 660 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCA 720 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCC 780 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCT 840 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCA 900 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGA 960 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTA 1020 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCA 1080 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 GCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGT 1140 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGA 1200 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTT 1260 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 CACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTG 1320 consensus_13275#1 -------------------------------GCCGGGACGTTCGCGGGGCGCCGGCCGTG 29 ***************************** consensus_13275#0 CTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACAC 1380 consensus_13275#1 CTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACAC 89 ************************************************************ consensus_13275#0 GCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCT 1440 consensus_13275#1 GCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCT 149 *************************************************** ******** consensus_13275#0 CGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCG 1500 consensus_13275#1 CGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCG 209 ************************************************************ consensus_13275#0 GTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCC 1560 consensus_13275#1 GTGGAACCAGCACGGCCTCGGCGGGGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCC 269 ************************ *********************************** consensus_13275#0 GGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGC 1620 consensus_13275#1 GGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGC 329 ************************************************************ consensus_13275#0 CGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGA 1680 consensus_13275#1 CGGGCGGCCGTGCCCGCTCGACGCGCTTTGGGCGCCGTTCGACCTGTACGGCCCGGCCGA 389 *************************** ******************************** consensus_13275#0 CTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCG 1740 consensus_13275#1 CTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTTTTTTCCTTCTTTCG 449 ********************************************* ************** consensus_13275#0 CCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACC 1800 consensus_13275#1 CCGACCCCGTACAAATTTTTGAGTTTTCAATTTTTTTCCCCCATTACCTGTTCAAACCCC 509 ****************** ****** ****** ** *** ***************** ** consensus_13275#0 TACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGT 1860 consensus_13275#1 TACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATCCCTTGT 569 ***************************************************** ****** consensus_13275#0 GTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTT 1920 consensus_13275#1 GTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCCCTTTTTTTGATCGTTTTGTT 629 *************************************** ******************** consensus_13275#0 ACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGC 1980 consensus_13275#1 ACTAAAAAAAGAGGTCATTTGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG--- 686 ********************** ***** * * ** * consensus_13275#0 ATCATCATAAATAAAAAGCACAGAAAAATAGACATTGCAGCAGCATGTGTTCTTCTTCAA 2040 consensus_13275#1 ------------------------------------------------------------ consensus_13275#0 AAAAAA 2046 consensus_13275#1 ------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||