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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13278#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2977 fasta sequence
[AACTCTGAAGAAAACACACCATTTGCTTGGTGTCAATTATTGGAGGAGGATTTGAAAAATGCAACTATTGATCCTAGTGAAATCTCCGAGACATTTGATAGCTGTCCATATTATCTAAGTGAGAACACCAAATCTGCTCTCCAGTCATCAGCATATGTAAATTTGCACTGCAAGGACTATATCAAGTTCACAAAAGATATTTCTTCTCTTAGTCAGCGAGTACTGCTGTCTGGTCCGGCAGGAACCGATATCTACCAACAATATCTGGTTAAGGCACTTGCAAAACACTTTGGTGCTAGGTTGCTCACCATAGACTCTTCCATGCTATTTGGTGGGAAGACTACCAAGGAATCAGATTCATACAAAAAGGGTGATAGAGTGCGGTACATTGGTTCGTTACAGTCAACAGGTATTATCCTTGATGGAGAAAGTCCTCCAGATTTTGGTTCACAAGGTGAAATATGTCTTCCTTTCGAAGAGAATAGATCATCAAAGGTTGGAGTAAGATTTGATGAACAAATTCCGGGAGGTATTGATCTAGGAGGCAATTGTGAAGTTGATCATGGTTTATTTTGTTCAGTTGATTCTTTATGCCTCGATGCTCCAGGATGGGAAATTAGATCGAAACACCCATTTGATGTCATTATTCAGTTTATCTCTGAAGAAATCGAGCATGGTCCTCTAGTCTTATTTTTGAAGGACACAGAGAGAATTTGTGGGAATAATGATTCCTATCGTGCTCTCAAGAGCAAGCTTCAATATTTCCCAGCAGGTGCTTTTATTATTGGTTCTCATGTACATCCTGATGATCACAAAGAGAAGGCAAATGCCAGTTCTCTACTTCTTTCAAAGTTCCCATACAGCCAAGCAATACTTGACTTTGCATTTCAGGACTTTGATCGTGGAACTGATAAGAATAAAGAAACTTCAAAGGCGACGAAGCATCTAACTAAGCTTTTCCCAAATAAAGTGACGATCCAGCCACCAAAAGATGAAATTGAGCGCTCGAAGTGGAACCAGATGCTAGATCGAGATGTTGAAATTCTTAAAGGAAATGCTAACATTTCAAAAATTCGCTCTTTTCTATTAAAGATGGGCTTGGAAAGCAGTGATCTTGAAACAGTATGTGTTAAGGATCGTCTCCTAACAAACGAATGTATTGGTAAAATAGTTGGTTTTGCTTTGAGTCATCAACTTAAGCACTCTACAATTCCAGACCCTTCGAGTGATGTTCGTTTCACTCTATCTAGTGAAAGTCTTAAGCATGGTGTTGACATGTTGGAAAGTGTGGAATCTAACCCTAAGAGCAGCAACATAAGGAAGTCGCTCAAGGATATTGCTACTGAGAATGAATTTGAAAAGCGACTTCTTGCTGATGTTATACCCCCGGACGAAATAGGTGTCACCTTTGAGGACATTGGGGCATTGGAAAGTGTCAAGGAAACTCTTAAGGAGTTAGTGATGCTACCTTTGCAAAGGCCTGAATTGTTTTCCAGAGGTCAACTTATGAAGCCATGTAAAGGAATATTACTTTTTGGCCCGCCTGGTACAGGAAAGACAATGCTTGCCAAAGCTGTGGCTACAGAGGCTGGTGCGAATTTCATAAATATATCAATGTCGAGCATCTCTTCAAAGTGGTTTGGTGAAGGAGAGAAGTTTGTGAAAGCTGTATTTTCACTGGCAAGCAAAATTGCTCCAAGTGTTATTTTCGTGGATGAGGTTGATGGCATGTTGGGTAGGCGTGAAAACCCTGGAGAACATGAAGCAATGCGTAAAATGAAAAATGAGTTTATGGTGAACTGGGATGGTCTAAGAACAAAAGATAAAGAGCGTGTATTAGTACTTGCTGCAACTAATAGGCCATTTGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCTAGGCGGTTGATGGTGAATTTGCCGGATGCATCAAATAGAAGAAAAATTCTTAGCGTGATACTAGCTAAAGAAGATTTGGCAGATGATGTCGATCTTGAAGCTGTAGCTAGCTTGACTGAAGGGTATTCTGGCAGTGATCTCAAGAATCTATGTATTACTGCTGCTCATCTCCCTATTAAAGATATCCTTGAAAAGGAGAAGAAGGAGAAAGCTTTAGCAGAGGCAGAAAATAGGCCGCTGCCCCAATCATTTTCAAGTAACGATGTCCGTGCCTTACGACTAAGTGATTTCAAACATGCTCATGAACAGGTCTGTGCAAGTGTGTCTTCGGATTCAACTAACATGAATGAACTTATTCAATGGAATGATCTTTATGGAGAAGGTGGATCAAGGAAAAAGACTACTCTAAGCTACTTCAT-GTAGCTGAAGTTCATTCCAATGTACATATATATCAGAAGCATTAGGACAAACAATGGTGATTGGAGGCAAAAGTTTTGCAGATTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGTTCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGT-CGATTTTGGCGAAAGAGGAAGATGGGATT-CGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACCTGGGGGTAGTGACGGCAACATA-TCACCA-TCCGCAAAAATAGATTACATTTCTAGTCCCCATAGT-CAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCGGTTGGTTCACCGTCATTTTTCTCATTTCGTGACAGCGATTCAAATTTTTTTAGGTTAAAGTTGTGCCTGTGCAATTGTACAGTATGAGCATCCAGGCCAATTAACTTGTTATTGCGGTCACCGCAAAATTCATTTTAAACATGTCCGTTGTTACTCCATTTGTCGACTGTCTACCAGGTTTTGGTACTGCCCCTTTACTGATCATAATATTATATATGGAGATGCGGGTTACCATTATCGATTCAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAANAAAAAANAA]
[+] EMBL AK066938 [AACTCTGAAGAAAACACACCATTTGCTTGGTGTCAATTATTGGAGGAGGATTTGAAAAATGCAACTATTGATCCTAGTGAAATCTCCGAGACATTTGATAGCTGTCCATATTATCTAAGTGAGAACACCAAATCTGCTCTCCAGTCATCAGCATATGTAAATTTGCACTGCAAGGACTATATCAAGTTCACAAAAGATATTTCTTCTCTTAGTCAGCGAGTACTGCTGTCTGGTCCGGCAGGAACCGATATCTACCAACAATATCTGGTTAAGGCACTTGCAAAACACTTTGGTGCTAGGTTGCTCACCATAGACTCTTCCATGCTATTTGGTGGGAAGACTACCAAGGAATCAGATTCATACAAAAAGGGTGATAGAGTGCGGTACATTGGTTCGTTACAGTCAACAGGTATTATCCTTGATGGAGAAAGTCCTCCAGATTTTGGTTCACAAGGTGAAATATGTCTTCCTTTCGAAGAGAATAGATCATCAAAGGTTGGAGTAAGATTTGATGAACAAATTCCGGGAGGTATTGATCTAGGAGGCAATTGTGAAGTTGATCATGGTTTATTTTGTTCAGTTGATTCTTTATGCCTCGATGCTCCAGGATGGGAAATTAGATCGAAACACCCATTTGATGTCATTATTCAGTTTATCTCTGAAGAAATCGAGCATGGTCCTCTAGTCTTATTTTTGAAGGACACAGAGAGAATTTGTGGGAATAATGATTCCTATCGTGCTCTCAAGAGCAAGCTTCAATATTTCCCAGCAGGTGCTTTTATTATTGGTTCTCATGTACATCCTGATGATCACAAAGAGAAGGCAAATGCCAGTTCTCTACTTCTTTCAAAGTTCCCATACAGCCAAGCAATACTTGACTTTGCATTTCAGGACTTTGATCGTGGAACTGATAAGAATAAAGAAACTTCAAAGGCGACGAAGCATCTAACTAAGCTTTTCCCAAATAAAGTGACGATCCAGCCACCAAAAGATGAAATTGAGCGCTCGAAGTGGAACCAGATGCTAGATCGAGATGTTGAAATTCTTAAAGGAAATGCTAACATTTCAAAAATTCGCTCTTTTCTATTAAAGATGGGCTTGGAAAGCAGTGATCTTGAAACAGTATGTGTTAAGGATCGTCTCCTAACAAACGAATGTATTGGTAAAATAGTTGGTTTTGCTTTGAGTCATCAACTTAAGCACTCTACAATTCCAGACCCTTCGAGTGATGTTCGTTTCACTCTATCTAGTGAAAGTCTTAAGCATGGTGTTGACATGTTGGAAAGTGTGGAATCTAACCCTAAGAGCAGCAACATAAGGAAGTCGCTCAAGGATATTGCTACTGAGAATGAATTTGAAAAGCGACTTCTTGCTGATGTTATACCCCCGGACGAAATAGGTGTCACCTTTGAGGACATTGGGGCATTGGAAAGTGTCAAGGAAACTCTTAAGGAGTTAGTGATGCTACCTTTGCAAAGGCCTGAATTGTTTTCCAGAGGTCAACTTATGAAGCCATGTAAAGGAATATTACTTTTTGGCCCGCCTGGTACAGGAAAGACAATGCTTGCCAAAGCTGTGGCTACAGAGGCTGGTGCGAATTTCATAAATATATCAATGTCGAGCATCTCTTCAAAGTGGTTTGGTGAAGGAGAGAAGTTTGTGAAAGCTGTATTTTCACTGGCAAGCAAAATTGCTCCAAGTGTTATTTTCGTGGATGAGGTTGATGGCATGTTGGGTAGGCGTGAAAACCCTGGAGAACATGAAGCAATGCGTAAAATGAAAAATGAGTTTATGGTGAACTGGGATGGTCTAAGAACAAAAGATAAAGAGCGTGTATTAGTACTTGCTGCAACTAATAGGCCATTTGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCTAGGCGGTTGATGGTGAATTTGCCGGATGCATCAAATAGAAGAAAAATTCTTAGCGTGATACTAGCTAAAGAAGATTTGGCAGATGATGTCGATCTTGAAGCTGTAGCTAGCTTGACTGAAGGGTATTCTGGCAGTGATCTCAAGAATCTATGTATTACTGCTGCTCATCTCCCTATTAAAGATATCCTTGAAAAGGAGAAGAAGGAGAAAGCTTTAGCAGAGGCAGAAAATAGGCCGCTGCCCCAATCATTTTCAAGTAACGATGTCCGTGCCTTACGACTAAGTGATTTCAAACATGCTCATGAACAGGTCTGTGCAAGTGTGTCTTCGGATTCAACTAACATGAATGAACTTATTCAATGGAATGATCTTTATGGAGAAGGTGGATCAAGGAAAAAGACTACTCTAAGCTACTTCAT GTAGCTGAAGTTCATTCCAATGTACATATATATCAGAAGCATTAGGACAAACAATGGTGATTGGAGGCAAAAGTTTTGCAGATTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGTTCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGT CGATTTTGGCGAAAGAGGAAGATGGGATT CGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACCTGGGGGTAGTGACGGCAACATA TCACCA TCCGCAAAAATAGATTACATTTCTAGTCCCCATAGT CAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCGGTTGGTTCACCGTCATTTTTCTCATTTCGTGACAGCGATTCAAATTTTTTTAGGTTAAAGTTGTGCCTGTGCAATTGTACAGTATGAGCATCCAGGCCAATTAACTTGTTATTGCGGTCACCGCAAAATTCATTTTAAACATGTCCGTTGTTACTCCATTTGTCGACTGTCTACCAGGTTTTGGTACTGCCCCT ]
[+] EMBL CF304092 [ AAAAGGGTGATAGAGTGCGGTACATTGGTTCGTTACAGTCAACAGGTATTATCCTTGATGGAGAAAGTCCTCCAGATTTTGGTTCACAAGGTGAAATATGTCTTCCTTTCGAAGAGAATAGATCATCAAAGGTTGGAGTAAGATTTGATGAACAAATTCCGGGAGGTATTGATCTAGGAGGCAATTGTGAAGTTGATCATGGTTTATTTTGTTCAGTTGATTCTTTATGCCTCGATGCTCCAGGATGGGAAATTAGATCGAAACACCCATTTGATGTCATTATTCAGTTTATCTCTGAAGAAATCGAGCATGGTCCTCTAGTCTTATTTTTGAAGGACACAGAAAGAATTTGTGGGAATAATGATTCCTATCGTGCTCTCAAGAGCAAGCTTCAATATTTCCCAGCAGGTGCTTTTATTATTGGTTCTCATGTACATCCTGATGATCACAAAGAGAAGGCAAATGCCAGTTCTCTACTTCTTTCAAAGTTCCCATACAGCCAAGCAATACTTGACTTTGCATTTCAGGACTTTGATCGTGGAACTGATAAGAATAAAGAAACTTCAAAGGCGACGAAGCATCTAACTAAGCTTTTCCCAAATAAAGTGACGATCCAGCCACCAAAAGATGAAATTGAGCGCTCGAAGTGGAACCAGATGCTAGATCGAGATG ]
[+] EMBL CB640836 [ TGTGTTAAGGATCGTCTCCTAACAAACGAATGTATTGATAAAATAGTTGGTTTTGCTTTGAGTCATCAACTTAAGCACTCTACAATTCCAGACCCTTCGAGTGATGTTCGTTTCACTCTATCTAGTGAAAGTCTTAAGCATGGTGTTGACATGTTGGAAAGTGTGGAATCTAACCCTAAGAGCAGCAACATAAGGAAGTCGCTCAAGGATATTGCTACTGAGAATGAATTTGAAAAGCGACTTCTTGCTGATGTTATACCCCCGGACGAAATAGGTGTCACCTTTGAGGACATTGGGGCATTGGAAAGTGTCAAGGAAACTCTTAAGGAGTTAGTGATGCTACCTTTGCAAAGGCCTGAATTGTTTTCCAGAGGTCAACTTATGAAGCCATGTAAAGGAATATTACTTTTTGGCCCGCCTGGTACAGGAAAGACAATGCTTGCCAAAGCTGTGGCTACAGAGGCTGGTGCGAATTTCATAAATATATCAATGTCGAGCATCTCTTCAAA ]
[+] EMBL CA766915 [ AGTTTATGGTGAACTGGGATGGTCTAAGAACAAAAGATAAAGAGCGTGTATTAGTACTTGCTGCAACTAATAGGCCATTTGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCTAGGCGGTTGATGGTGAATTTGCCGGATGCATCAAATAGAAGAAAAATTCTTAGCGTGATACTAGCTAAAGAAGATTTGGCAGATGATGTCGATCTTGAAGCTGTAGCTAGCTTGACTGAAGGGTATTCTGGCAGTGATCTCAAGAATCTATGTATTACTGCTGCTCATCTCCCTATTAAAGATATCCTTGAAAAGGAGAAGAAGGAGAAAGCTTTAGCAGAGGCAGAAAATAGGCCGCTGCCCCAATCATTTTCAAGTAACGATGTCCGTGCCTTACGACTAAGTGATTTCAAACATGCTCATGAACAGGTCTGTGCAAGTGTGTCTTCGGATTCAACTAACATGAATGAACTTATTCAATGGAATGATCTTTATGGAGAAGGTGGATCAAGGAAAAAGACTACTCTAAGCTACTTCAT GTAGCTGAAGTTCATTCCAATGTACATATATATCAGAAGCATTAGGACAAACAATGGTGATTGGAGGCAAAAGTTTTGCAGATTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGNTCATATCGAGGCGGATGGGATAAGACATNCAATCGTCGCCATGGTGTGGGCTGTCCGATTTTGGCGAAAGAGGAANATGGGATTCCGGNATGNGGCTTACNAAATGNCTGCTGGGGNGGACCTGGGGGTAGTGACGGCAACATATTCACCATTCCGC AAAANAGATTACATTTNTAGTCCCCATANTCCAGGTCAGGC ]
[+] EMBL CF308878 [ GGATGCATCAAATAGAAGAAAAATTCTTAGCGTGATACTAGCTAAAGAAGATTTGGCAGATGATGTCGATCTTGAAGCTGTAGCTAGCTTGACTGAAGGGTATTCTGGCAGTGATCTCAAGAATCTATGTATTACTGCTGCTCATCTCCCTATTAAAGATATCCTTGAAAAGGAGAAGAAGGAGAAAGCTTTAGCAGAGGCAGAAAATAGGCCGCTGCCCCAATCATTTTCAAGTAACGATGTCCGTGCCTTACGACTAAGTGATTTCAAACATGCTCATGAACAGGTCTGTGCAAGTGTGTCTTCGGATTCAACTAACATGAATGAACTTATTCAATGGAATGATCTTTATGGAGAAGGTGGATCAAGGAAAAAGACTACTCTAAGCTACTTCATGGTAGCTGAAGTTCATTCCAATGTACATATATATCAGAAGCAT ]
[-] EMBL CF308879 [ CTTATTCAATGGAATGATCTTTATGGAGAAGGTGGATCAAGGAAAAAGACTACTCTAAGCTACTTCAT GTAGCTGAAGTTCATTCCAATGTACATATATATCAGAAGCATTAGGACAAACAATGGTGATTGGAGGCAAAAGTTTTGCAGATTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGTTCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGT CGATTTTGGCGAAAGAGGAAGATGGGATT CGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACCTGGGGGTAGTGACGGCAACATA TCACCA TCCGCAAAAATAGATTACATTTCTAGTCCCCATAGT CAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCGGTTGGTTCACCGTCATTTTTCTCATTTCGTGACAGCGATTCAAATTTTTTTAGGTTAAAGTTGTGCCTGTGCAATTGTACAGTATAAGCATCCAGGCCAATTAACTTGTTATTGCGGTCACCGCAAAATTCATTTTAAACATGTCCGTTGTTACTCCAaaaaa ]
[-] EMBL CA762815 [ ggGGAATGATCCTTTTGGAGAAGGTGGATCAAGGAAAAAGACTACTCTAAGCTACTTCAA GTAGCTGAAGTTCATTCCAATGTACATATATATCAGAAGCACTAGGACAAACAATGGTGATTGGAGGCAAAAGTTTTGCAGATTCCCTACAGTAAAAAAAGAACTGTACTATTTGCTAGACATCAGAAGAATTAACAACAGTTCAAATCGAGGCGGATGGGATAAGACATTCAATTGTTGCCATGGTGTGGGCTGT CGATTTTGGCGAAAGAGGAAGATGGGATT CGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACCTGGGGGTAGTGACGGCAACATA TCACCA TCCGCAAAAATAGATTACATTTCTAGTCCCCATAGT CAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCGGTTGGTTCACCGTCATTTTTCTCATTTCGTGACAGCGATTCAAATTTTTTTAGGTTAAAGTTGTGCCTGTGCAATTGTACAGTATGAGCATCCAGGCCAATTAACTTGTTATTGCGGTCACCGCAAAATTCATTTTAAACATGTCCGTTGTTACTCCATTTGTCGACTGTCTACCAGGTTTTGGTACTGCCCCTTTACTGATCATAATATTATATAAGGAGATGCGGGTTACCATTATCGATTCAAAAAAAAAA ]
[+] EMBL BI810969 [ AGACATTCAATCGTC CCATGGTTTGGCCTTT CGATTTTGCCGAAAGAGGAAGATGGGATT CGGGATGTGGCTTACAAATTGCCTGCTGT GTGGACCTGGGGTTAGTGAC GCAACATA TCACCA TCCGC AAAATAGATTACATTTCTAGTCCCCATAGT CAGGTCA GCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCGGTTGGTTCACCGTCATTTTTCTCATTTCGTGACAGCGATTCAAATTTTTTTAGGTTAAAGTTGTGCCTGT C ATTGTACAGTATGAGCATCCAGGCCAATTAACTTGTTATTGCGGTCACCGCAAAATTCATTTTAAACATGTCC TTGTTACTCCATTTGTCGACTGTCTACCA GTTTTGGTACTGCCCCTTTACTGATCATAATATTATATATGGAGATCCGGGTTACCATTATCGATTCAAAAA ]
[+] EMBL AU162196 [ AAATTTTTTTAGGTTAAAGTTGTGCCTGTGCAATTGTACAGTATGAGCATCCAGGCCAATTAACTTGTTATTGCGGTCACCGCAAAATTCATTTTAAACATGTCCGTTGTTACTCCATTTGTCGACTGTCTACCAGGTTTTGGTACTGCCCCTTTACTGATCATAATATTATATATGGAGATGCGGGTTACCATTATCGATTCAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAANAAAAAANAA]
consensusID : consensus_13278#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 493 fasta sequence
[TGGACTGAAGGAGTAGAAAAGTTTTGCAGATTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGTTCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGTCGATTTTGGCGAAAGAGGAAGATGGGATTCGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACCTGGGGGTAGTGACGGCAACATATCACCATCCGCAAAAATAGATTACATTTCTAGTCCCCATAGTCAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCCGGTTGGTTCACCGTCATTTTTCTCATTTCGTGACAGCGATTCAAATTTTTTTAGGTTAAAGTTGTGCCTGTGCAATTGTACAGTATGAGCATCCAGGCCAATTAACTTGTTATTGCGGTCCCCGCAAAATTCATTTTAAACATGTCCGTTGTTACTCCAAAAAAAAAAAAAAAA]
[+] EMBL CF331877 [TGGACTGAAGGAGTAGAAAAGTTTTGCAGATTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGTTCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGTCGATTTTGGCGAAAGAGGAAGATGGGATTCGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACCTGGGGGTAGTGACGGCAACATATCACCATCCGCAAAAATAGATTACATTTCTAGTCCCCATAGTCAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCCGGTTGGTTCACCGTCATTTTTCTCATTTCGTG ]
[-] EMBL CF331878 [ AAGTTTTGCAGATTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGTTCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGTCGATTTTGGCGAAAGAGGAAGATGGGATTCGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACCTGGGGGTAGTGACGGCAACATATCCCCATCCGCAAAAATAGATTACATTTTTAGTCCCCATAGTCAGGTCAGGCAGCCAGTTCCGAGAATGACATTTCTTACCGGG CCGGTTGGTTCCCCGTCATTTTTCTCATTTCGTGACAGCGATTCAAATTTTTTTAGGTTAAAGTTGTGCCTGTGCAATTGTACAGTATGAGCATCCAGGCCAATTAACTTGTTATTGCGGTCCCCGCAAAATTCATTTTAAACATGTCCGTTGTTACTCCAAAAAAAAAAAAAAAA]
consensusID : consensus_13278#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 88 fasta sequence
[CAATAACAAGTTAATTGGCCTGGATGCTCATACTGTACAATTGCACAGGCACAACTTTATATATGGAGATGCGGGTTACCATTAAAAA]
[+] EMBL BM038787 [CAATAACAAGTTAATTGGCCTGGATGCTCATACTGTACAATTGCACAGGCACAACTTTATATATGGAGATGCGGGTTACCATTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13278#0 AACTCTGAAGAAAACACACCATTTGCTTGGTGTCAATTATTGGAGGAGGATTTGAAAAAT 60
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GCAACTATTGATCCTAGTGAAATCTCCGAGACATTTGATAGCTGTCCATATTATCTAAGT 120
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GAGAACACCAAATCTGCTCTCCAGTCATCAGCATATGTAAATTTGCACTGCAAGGACTAT 180
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 ATCAAGTTCACAAAAGATATTTCTTCTCTTAGTCAGCGAGTACTGCTGTCTGGTCCGGCA 240
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GGAACCGATATCTACCAACAATATCTGGTTAAGGCACTTGCAAAACACTTTGGTGCTAGG 300
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TTGCTCACCATAGACTCTTCCATGCTATTTGGTGGGAAGACTACCAAGGAATCAGATTCA 360
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TACAAAAAGGGTGATAGAGTGCGGTACATTGGTTCGTTACAGTCAACAGGTATTATCCTT 420
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GATGGAGAAAGTCCTCCAGATTTTGGTTCACAAGGTGAAATATGTCTTCCTTTCGAAGAG 480
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AATAGATCATCAAAGGTTGGAGTAAGATTTGATGAACAAATTCCGGGAGGTATTGATCTA 540
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GGAGGCAATTGTGAAGTTGATCATGGTTTATTTTGTTCAGTTGATTCTTTATGCCTCGAT 600
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GCTCCAGGATGGGAAATTAGATCGAAACACCCATTTGATGTCATTATTCAGTTTATCTCT 660
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GAAGAAATCGAGCATGGTCCTCTAGTCTTATTTTTGAAGGACACAGAGAGAATTTGTGGG 720
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AATAATGATTCCTATCGTGCTCTCAAGAGCAAGCTTCAATATTTCCCAGCAGGTGCTTTT 780
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 ATTATTGGTTCTCATGTACATCCTGATGATCACAAAGAGAAGGCAAATGCCAGTTCTCTA 840
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CTTCTTTCAAAGTTCCCATACAGCCAAGCAATACTTGACTTTGCATTTCAGGACTTTGAT 900
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CGTGGAACTGATAAGAATAAAGAAACTTCAAAGGCGACGAAGCATCTAACTAAGCTTTTC 960
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CCAAATAAAGTGACGATCCAGCCACCAAAAGATGAAATTGAGCGCTCGAAGTGGAACCAG 1020
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 ATGCTAGATCGAGATGTTGAAATTCTTAAAGGAAATGCTAACATTTCAAAAATTCGCTCT 1080
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TTTCTATTAAAGATGGGCTTGGAAAGCAGTGATCTTGAAACAGTATGTGTTAAGGATCGT 1140
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CTCCTAACAAACGAATGTATTGGTAAAATAGTTGGTTTTGCTTTGAGTCATCAACTTAAG 1200
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CACTCTACAATTCCAGACCCTTCGAGTGATGTTCGTTTCACTCTATCTAGTGAAAGTCTT 1260
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AAGCATGGTGTTGACATGTTGGAAAGTGTGGAATCTAACCCTAAGAGCAGCAACATAAGG 1320
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AAGTCGCTCAAGGATATTGCTACTGAGAATGAATTTGAAAAGCGACTTCTTGCTGATGTT 1380
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 ATACCCCCGGACGAAATAGGTGTCACCTTTGAGGACATTGGGGCATTGGAAAGTGTCAAG 1440
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GAAACTCTTAAGGAGTTAGTGATGCTACCTTTGCAAAGGCCTGAATTGTTTTCCAGAGGT 1500
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CAACTTATGAAGCCATGTAAAGGAATATTACTTTTTGGCCCGCCTGGTACAGGAAAGACA 1560
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 ATGCTTGCCAAAGCTGTGGCTACAGAGGCTGGTGCGAATTTCATAAATATATCAATGTCG 1620
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AGCATCTCTTCAAAGTGGTTTGGTGAAGGAGAGAAGTTTGTGAAAGCTGTATTTTCACTG 1680
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GCAAGCAAAATTGCTCCAAGTGTTATTTTCGTGGATGAGGTTGATGGCATGTTGGGTAGG 1740
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CGTGAAAACCCTGGAGAACATGAAGCAATGCGTAAAATGAAAAATGAGTTTATGGTGAAC 1800
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TGGGATGGTCTAAGAACAAAAGATAAAGAGCGTGTATTAGTACTTGCTGCAACTAATAGG 1860
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CCATTTGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCTAGGCGGTTGATGGTGAATTTG 1920
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CCGGATGCATCAAATAGAAGAAAAATTCTTAGCGTGATACTAGCTAAAGAAGATTTGGCA 1980
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GATGATGTCGATCTTGAAGCTGTAGCTAGCTTGACTGAAGGGTATTCTGGCAGTGATCTC 2040
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AAGAATCTATGTATTACTGCTGCTCATCTCCCTATTAAAGATATCCTTGAAAAGGAGAAG 2100
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AAGGAGAAAGCTTTAGCAGAGGCAGAAAATAGGCCGCTGCCCCAATCATTTTCAAGTAAC 2160
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GATGTCCGTGCCTTACGACTAAGTGATTTCAAACATGCTCATGAACAGGTCTGTGCAAGT 2220
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GTGTCTTCGGATTCAACTAACATGAATGAACTTATTCAATGGAATGATCTTTATGGAGAA 2280
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 GGTGGATCAAGGAAAAAGACTACTCTAAGCTACTTCATGTAGCTGAAGTTCATTCCAATG 2340
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TACATATATATCAGAAGCATTAGGACAAACAATGGTGATTGGAGGCAAAAGTTTTGCAGA 2400
consensus_13278#1 ------------------------------TGGACTGAAGGAGTAGAAAAGTTTTGCAGA 30
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGT 2460
consensus_13278#1 TTCACTACAGTAAAAAAAGAACTGTACTATCTGCTAGACATCAGAAGAATTAACAACAGT 90
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGTCGATTT 2520
consensus_13278#1 TCATATCGAGGCGGATGGGATAAGACATTCAATCGTCGCCATGGTGTGGGCTGTCGATTT 150
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TGGCGAAAGAGGAAGATGGGATTCGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACC 2580
consensus_13278#1 TGGCGAAAGAGGAAGATGGGATTCGGGATGTGGCTTACAAATTGCCTGCTGTGGTGGACC 210
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TGGGGGTAGTGACGGCAACATATCACCATCCGCAAAAATAGATTACATTTCTAGTCCCCA 2640
consensus_13278#1 TGGGGGTAGTGACGGCAACATATCACCATCCGCAAAAATAGATTACATTTCTAGTCCCCA 270
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TAGTCAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCC-GGTTGGTTCAC 2699
consensus_13278#1 TAGTCAGGTCAGGCAGCCAGTTCCGAGAATGACATCTCTTACCGGGCCCGGTTGGTTCAC 330
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 CGTCATTTTTCTCATTTCGTGACAGC-GATTCAAATTTTTTTAGGTTAAAGTTGTGCCTG 2758
consensus_13278#1 CGTCATTTTTCTCATTTCGTGACAGC-GATTCAAATTTTTTTAGGTTAAAGTTGTGCCTG 389
consensus_13278#2 -----------CAATAACAAGTTAATTGGCCTGGATGCTCATACTGTACAATTGCACAGG 49
** * * * * ** * ** ** * *** * *
consensus_13278#0 TGCAATTGTACAGTATGAGCATCCAGGCCA--ATTAACTTGTTATTGCGGTCACCGCAAA 2816
consensus_13278#1 TGCAATTGTACAGTATGAGCATCCAGGCCA--ATTAACTTGTTATTGCGGTCCCCGCAAA 447
consensus_13278#2 CACAACTTTATA-TATGGAGATGCGGGTTACCATTAAAAA-------------------- 88
*** * ** * **** ** * ** * *****
consensus_13278#0 ATTCATTTTAAACATGTCCGTTGTTACTCCATTTGTCGACTGTCTACCAGGTTTTGGTAC 2876
consensus_13278#1 ATTCATTTTAAACATGTCCGTTGTTACTCCAAAAAAAAAAAAAAAA-------------- 493
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 TGCCCCTTTACTGATCATAATATTATATATGGAGATGCGGGTTACCATTATCGATTCAAA 2936
consensus_13278#1 ------------------------------------------------------------
consensus_13278#2 ------------------------------------------------------------
consensus_13278#0 AAAAAAAAANAAAAAAAAAAAAAAAAAAAAANAAAAAANAA 2977
consensus_13278#1 -----------------------------------------
consensus_13278#2 -----------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||