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Oryza sativa
cluster # 13283 cluster # 13283       Sequences # 12       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13283#0 length = 702 sequences # 7  
consensus_13283#1 length = 559 sequences # 2  
consensus_13283#2 length = 557 sequences # 1  
consensus_13283#3 length = 531 sequences # 1  
consensus_13283#4 length = 393 sequences # 1  

consensusID : consensus_13283#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 702
fasta sequence
                              [ATCATCGATCGC-TTAACTAATTATATATATATCCAGCCAGCC-GCATCAGGAGAGATC-GATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGAGGA-GGA-AGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGC-A-TCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCG-CCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCT-AGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCAAAAAAATCGCCTCGGTCGATATATAATTACTCTCTCCTTCTCTTCTCTTCCTCTTTCTAAATTAATCATCGTATAATTATATAAAATTTCTTAAATTGATCAACATATAA]

[+] EMBL CF303672             [ATCATCGATCGC TTAACTAATTATATATATATCCAGCCAGCC GCATCAGGAGAGATC GATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGAGGA GGA AGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGC A TCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCG CCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCT AGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGT                                                                                                                                                    ]
[+] EMBL OSC3491              [     CGATCG  TTAACTAATTATATATATATCCAGCCAGCC GCATCAGGAGAGATC GATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGA GA GGA AGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGT GCGCAA TCAGCAGCAGCACAAGGTTGTGGGCCGCCAAGCGTAATCG G GCCTNCCCCG CTTCAA NATATGCACATGCGT CTAAGAACCGTTTCttt                                                                                                                                                                                                                                                            ]
[+] EMBL AU082972             [      GATCGCTTTACCTAATTATATATATATCCAGCCAGCCGGCATCAGAAGAGATCGGATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGNAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGAGGA GGA AGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGC A TCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCG CCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCT AGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCAAAAAAA                                                                                                        ]
[+] EMBL C29025               [               AACTAATTATATATATATCCAGCCAGCC GCATCAGGAGAGATC GATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTNTCCGGAGGAGGGA AGAAGATGAGGCCGGCTNCAGGAAGATCGCAGAGTCGGAGCCCGTNGACCTCTTCTNCGACGCCG                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL D85555               [               AACTAATTATATATATATCCAGCCAGCC GCATCAGGAGAGATC GATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTNTCCGGAGGAGGGA AGAAGATGAGGCCGGCTNCAGGAAGATCGCAGAGTCGGAGCCCGTNGACCTCTTCTNCGACGCCG                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK064224             [                                                                           TCGAAGAGAGAGAGAGAGAGAGGGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGAGGA GGA AGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGC A TCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCG CCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCT AGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAGGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCATGATCATCGCCTCGGTCGATATATAATTACTCTCTCCTTCTCTTCTCTTCCTCTTTCTAAATTAATCATCGTATAATTATATAAAATTTCTTAAATTGATCAACATATAA]
[+] EMBL OSC550               [                                                                              AAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAG AAGAAGGAGGTGAGGCACGGCACGG CCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGA GA GGANAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGT GCGC ANTCAGCAGCAGCACAAGGTTGTNGGCCGCCAAGCGTAATCGCGTACCTGCCCCGCCTTCAAGCATATGCACAT                                                                                                                                                                                                                                                                                  ]


>consensus_13283#0 ATCATCGATCGCTTAACTAATTATATATATATCCAGCCAGCCGCATCAGGAGAGATCGAT CATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGA AGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGA CTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCG ATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCA GGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGCATC AGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCA TATGCACATGCGTGCTAGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAAGCCAGGC CGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACA AGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCAAAAAAATC GCCTCGGTCGATATATAATTACTCTCTCCTTCTCTTCTCTTCCTCTTTCTAAATTAATCA TCGTATAATTATATAAAATTTCTTAAATTGATCAACATATAA



consensusID : consensus_13283#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 559
fasta sequence
                              [AGAGAGAGAGAGTAATTAACATGGCGACGAGACAAGGGGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTTTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAACCGTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCATGATCAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA762232             [AGAGAGAGAGAGTAATTAACATGGCGACGAGACAAGGGGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTTTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAACCGTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCATGATCAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA762233             [AGAGAGAGAGAGTAATTAACATGGCGACGAGACAAGGGGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTTTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAACCGTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCATGATCAAAAAAAAAAAAAAAAAAA]


>consensus_13283#1 AGAGAGAGAGAGTAATTAACATGGCGACGAGACAAGGGGGAGGTGAGGCACGGCACGGCC CAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCG CTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGC GTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGC AGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTTTCCGACGCCGGCCGCGTCGCGCAT CAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGC ATATGCACATGCGTGCTGCAGCTCTAGCTAGAACCGTCTCCTCTCCTGCTAATTAAGCCA GGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCG ACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTCAAATAGAACTATATAATCCATGATC AAAAAAAAAAAAAAAAAAA



consensusID : consensus_13283#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 557
fasta sequence
                              [ATCCGGNTGCACAATCGGAAGTTTCAGCACCACCCCATCAGGAGAGATCGATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGAGGAGGAANANTATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTAGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTT]

[+] EMBL AA752943             [ATCCGGNTGCACAATCGGAAGTTTCAGCACCACCCCATCAGGAGAGATCGATCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACCAGGCTCGCCGCGTCTGTCCGGAGGAGGAANANTATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTAGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTT]


>consensus_13283#2 ATCCGGNTGCACAATCGGAAGTTTCAGCACCACCCCATCAGGAGAGATCGATCATATACA TCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTG AGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTC ATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTC GACCAGGCTCGCCGCGTCTGTCCGGAGGAGGAANANTATGAGGCCGGCTGCAGGAAGATC GCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAG CACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACA TGCGTGCTAGAACCGTCTCCTCTCCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACG TATGTGTGTATGTATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAG CTAGTAGCTAGCCTTTT



consensusID : consensus_13283#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 531
fasta sequence
                              [GGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAGCGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACACCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACTAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAGAATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTTTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGGGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAACCGTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTTTCAAATAGAACTATATAATCCATGATCATCGCCTCGGTTGATAAAAAAAAAAAAAA]

[-] EMBL CA762231             [GGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAGCGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACACCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCGATCTCTTCGACTAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAGAATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTTTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGGGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAACCGTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTTTCAAATAGAACTATATAATCCATGATCATCGCCTCGGTTGATAAAAAAAAAAAAAA]


>consensus_13283#3 GGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAGCGGTGACGACGAGATGCTACGGA CTGGCTTCATCAACGGCACACCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCGTCG ATCTCTTCGACTAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAGAATCGTCCGGAGGAGG AAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTTTCCG ACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGGGTAATCGC GCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAACCGTCTC CTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTACGAATA ATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTTTTCAAA TAGAACTATATAATCCATGATCATCGCCTCGGTTGATAAAAAAAAAAAAAA



consensusID : consensus_13283#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 393
fasta sequence
                              [AGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCAGTCGATCTCTTCGACCAGGCTCCCGCGTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTAGAACCGTCTCCTCTCCTTCTCTT]

[+] EMBL BI797809             [AGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCAGTCGATCTCTTCGACCAGGCTCCCGCGTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTAGAACCGTCTCCTCTCCTTCTCTT]


>consensus_13283#4 AGAGAGTAATTAACATGGCGACGAGCAAGAAGGAGGTGAGCACGGCACGGCCCAGGCGAA GGTGAACGGTGACGACGAGATGCTACGGACTGGCTTCATCAACGGCACCCCGCTCGAGGC CGGCAAGGTCGCTGACTCCCAGCCCAGTCGATCTCTTCGACCAGGCTCCCGCGTCTCCCA GCAGCAGCAGCAGCAGCATCGTCCGGAGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGAT CGCAGAGTCGGAGCCCGTGGACCTCTTCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCA GCACAAGGTGGTGGGCCGCCAAGCGTAATCGCGCCCTGCCCCGCCTTCAAGCATATGCAC ATGCGTGCTAGAACCGTCTCCTCTCCTTCTCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13283#1      ------------------------------------------------------------
consensus_13283#3      ------------------------------------------------------------
consensus_13283#4      ------------------------------------------------------------
consensus_13283#0      ATCATCGATCGCTTAACTAATTATATATATATCCAGC-CAGCCGCATCAGGAGAGATCGA 59
consensus_13283#2      ------ATCCGGNTGCACAATCGGAAGT---TTCAGCACCACCCCATCAGGAGAGATCGA 51
                                                                                   

consensus_13283#1      -------------------------AGAGAGAGAGAGTAATTAACATGGCGACGAGACAA 35
consensus_13283#3      ------------------------------------------------------------
consensus_13283#4      -------------------------------AGAGAGTAATTAACATGGCGACGAG-CAA 28
consensus_13283#0      TCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAG-CAA 118
consensus_13283#2      TCATATACATCGATCGAAGAGAGAGAGAGAGAGAGAGTAATTAACATGGCGACGAG-CAA 110
                                                                                   

consensus_13283#1      GGGGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACG 95
consensus_13283#3      --GGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAGCGGTGACGACGAGATGCTACG 58
consensus_13283#4      GAAGGAGGTGAG-CACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACG 87
consensus_13283#0      GAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACG 178
consensus_13283#2      GAAGGAGGTGAGGCACGGCACGGCCCAGGCGAAGGTGAACGGTGACGACGAGATGCTACG 170
                          ********* ************************* *********************

consensus_13283#1      GACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCC-G 154
consensus_13283#3      GACTGGCTTCATCAACGGCACACCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCC-G 117
consensus_13283#4      GACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCCAG 147
consensus_13283#0      GACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCC-G 237
consensus_13283#2      GACTGGCTTCATCAACGGCACCCCGCTCGAGGCCGGCAAGGTCGCTGACTCCCAGCCC-G 229
                       ********************* ************************************ *

consensus_13283#1      TCGATCTCTTCGACCAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGG 214
consensus_13283#3      TCGATCTCTTCGACTAGGCTCGCCGCGTCTCCCAGCAGCAGCAGCAG---AATCGTCCGG 174
consensus_13283#4      TCGATCTCTTCGACCAGGCTC-CCGCGTCTCCCAGCAGCAGCAGCAGCAGCATCGTCCGG 206
consensus_13283#0      TCGATCTCTTCGACCAGGCTCGCCGCGTCT------------------------GTCCGG 273
consensus_13283#2      TCGATCTCTTCGACCAGGCTCGCCGCGTCT------------------------GTCCGG 265
                       ************** ****** ********                        ******

consensus_13283#1      AGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCT 274
consensus_13283#3      AGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCT 234
consensus_13283#4      AGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCT 266
consensus_13283#0      AGGAGGAAGAAGATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCT 333
consensus_13283#2      AGGAGGAANANTATGAGGCCGGCTGCAGGAAGATCGCAGAGTCGGAGCCCGTGGACCTCT 325
                       ******** *  ************************************************

consensus_13283#1      TTTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGT 334
consensus_13283#3      TTTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGGGT 294
consensus_13283#4      TCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGT 326
consensus_13283#0      TCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGT 393
consensus_13283#2      TCTCCGACGCCGGCCGCGTCGCGCATCAGCAGCAGCACAAGGTGGTGGGCCGCCAAGCGT 385
                       * ******************************************************* **

consensus_13283#1      AATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAAC 394
consensus_13283#3      AATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTGCAGCTCTAGCTAGAAC 354
consensus_13283#4      AATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCT------------AGAAC 374
consensus_13283#0      AATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTAGAACCGT--CTCCTCT 451
consensus_13283#2      AATCGCGCCCTGCCCCGCCTTCAAGCATATGCACATGCGTGCTAGAACCGT--CTCCTCT 443
                       *******************************************                 

consensus_13283#1      CGTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTA 454
consensus_13283#3      CGTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTA 414
consensus_13283#4      CGTCTCCTCTCCTTCTCTT----------------------------------------- 393
consensus_13283#0      CCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTAATACTAGTA 511
consensus_13283#2      CCTCTCCTCTCCTGCTAATTAAGCCAGGCCGTATACGTATGTGTGTATGTA-TACTAGTA 502
                       * *********** **  *                                         

consensus_13283#1      CGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTT 514
consensus_13283#3      CGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTT 474
consensus_13283#4      ------------------------------------------------------------
consensus_13283#0      CGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTTTTTTT 571
consensus_13283#2      CGAATAATGCATAGTACTACTATGCGACAAGCTGCTAGCTAGTAGCTAGCCTTTT----- 557
                                                                                   

consensus_13283#1      --CAAATAGAACTATATAATCCATGATCAA----------AAAAAAAAAAAAAAAAA--- 559
consensus_13283#3      TTCAAATAGAACTATATAATCCATGATCATCGCCTCGGTTGATAAAAAAAAAAAAAA--- 531
consensus_13283#4      ------------------------------------------------------------
consensus_13283#0      --CAAATAGAACTATATAATCCAAAAAAATCGCCTCGGTCGATATATAATTACTCTCTCC 629
consensus_13283#2      ------------------------------------------------------------
                                                                                   

consensus_13283#1      ------------------------------------------------------------
consensus_13283#3      ------------------------------------------------------------
consensus_13283#4      ------------------------------------------------------------
consensus_13283#0      TTCTCTTCTCTTCCTCTTTCTAAATTAATCATCGTATAATTATATAAAATTTCTTAAATT 689
consensus_13283#2      ------------------------------------------------------------
                                                                                   

consensus_13283#1      -------------
consensus_13283#3      -------------
consensus_13283#4      -------------
consensus_13283#0      GATCAACATATAA 702
consensus_13283#2      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)