These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13284#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2161 fasta sequence [CTCTACTGAAAGATGTACTGGTTTTGAGAGCACTGAATCTACACATTATCTGAAAAATACTTTGCAATCTTGGCAAACTAGAGTTATAGTTGTTCTCAACTTGCTTTCTTATTGGTAAAAAAGTTGACTTTTGCCATCTTTTGTGTTCTAATTCACTTTTTGTATCTGTATTTAATTTCTTGGACAGCAATGATGGAGTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAAGCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCAGGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTGTCTCGGCGATCAGGCTGTGGAAGGTGGAGCTGTACTGCCCAGTGGTCGCCATGATCATGGAGCACCCGGCTCATCAGACGAAAGATGAGAAGCTGCAGTTCTCGCTGAACTACCAGCATCTGGAGGCCGTGATCCAGTTCATCTACAGAGTCACCTTCAGGGAGAACTGGATCGACGTCACCGTCAACGTCGACAACATAAGGTGCGACCTGATCCAGCTGGTGTCGGAGACGCTGATGGCGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGCGGATATCACTGCAGCTGACGCCGCTGGTGCAGACGGACATCCTCTCCCTGACAGTGAGCCGGTCGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGACTCTGAGAATGTCTGCTTCTGTTATGGAATTCAAAATTATGTTGGGCATTACCCGTAACCCTTGTGCAGGCGCAAACATATGGAGAGACTGAAGATTGGTCACTTGTAGTTGTAGTACCTATTTTTTTTTTTCGTTCTTTTTTTTTTTGGGTCGAAAACCAGGAGTTGTTTTACCTGTTATGAAGATTTCAGAGTTTTAGAATTCAAAAGTTCCTGACGTGTAAGTATTTGTCATGCCATTTGAAAATCTCTAGTTTGAAGTTTAACTCTTTCCCTTGGAAAGCTTCTGTAACTTTTGAACCAGAGTTTGGAGCTGTATATTGGGAGCTCTTGAGGTATGAACCAGACATTTACATGATATTCCAATGTTATAAAA] [+] EMBL AK066676 [CTCTACTGAAAGATGTACTGGTTTTGAGAGCACTGAATCTACACATTATCTGAAAAATACTTTGCAATCTTGGCAAACTAGAGTTATAGTTGTTCTCAACTTGCTTTCTTATTGGTAAAAAAGTTGACTTTTGCCATCTTTTGTGTTCTAATTCACTTTTTGTATCTGTATTTAATTTCTTGGACAGCAATGATGGAGTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTC TCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAAGCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCAGTCACCAACTGGATCATAGAGACTCGCCGGTCAGGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTGTCTCGGCGATCAGGCTGTGGAAGGTGGAGCTGTACTGCCCAGTGGTCGCCATGATCATGGAGCACCCGGCTCATCAGACGAAAGATGAGAAGCTGCAGTTCTCGCTGAACTACCAGCATCTGGAGGCCGTGATCCAGTTCATCTACAGAGTCACCTTCAGGGAGAACTGGATCGACGTCACCGTCAACGTCGACAACATAAGGTGCGACCTGATCCAGCTGGTGTCGGAGACGCTGATGGCGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGCGGATATCACTGCAGCTGACGCCGCTGGTGCAGACGGACATCCTCTCCCTGACAGTGAGCCGGTCGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATTGTTCTAATTTTTTTTAATGATTACTTAATCAAGACTCTGAGAATGTCTGCTTCTGTTATGGAATTCAAAATTAT ] [+] EMBL CB664138 [ GTTTTGAGAGCACTGAATCTACACATTATCTGAAAAATACTTTGCAATCTTGGCAAACTAGAGTTATAGTTGTTCTCAACTTGCTTTCTTATTGGTAAAAAAGTTGACTTTTGCCATCTTTTGTGTTCTAATTCACTTTTTGTATCTGTATTTAATTTCTTGGACAGCAATGATGGAGTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAA AAGCTGATGCT ] [+] EMBL CB661966 [ TGGTAAAAAAGTTGACTTTTGCCATCTTTTGTGTTCTAATTCACTTTTTGTATCTGTATTTAATTTCTTGGACAGCAATGATGGAGTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAAGCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCAGGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTGTCTCGGCGATCANGCTGTGGAAGGT ] [+] EMBL CB644095 [ CTTGGACAGCAATGATGGAGTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAAGCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCAGGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTGTCTCGGCGATCAGGCTGTGGAAGGTGGAGCTGTACTGCCCAGTGGTCGCCATGATCATGGAGCACCCGGCTCATCAGACGAAAGATGAGAAGCT ] [+] EMBL CB648427 [ GTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAAGCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCAGGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTGTCTCGGCGATCAGGCTGTGGAAGGTGGAGCTGTACTGCCCAGTGGTCGCCATGATCATGGAGCACCCGGCTCATCAGACGAAAGATGAGAAGCTGCAGTTCTC ] [+] EMBL AK119649 [ TGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAAGCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCAGGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTGTCTCGGCGATCAGGCTGTGGAAGGTGGAGCTGTACTGCCCAGTGGTCGCCATGATCATGGAGCACCCGGCTCATCAGACGAAAGATGAGAAGCTGCAGTTCTCGCTGAACTACCAGCATCTGGAGGCCGTGATCCAGTTCATCTACAGAGTCACCTTCAGGGAGAACTGGATCGACGTCACCGTCAACGTCGACAACATAAGGTGCGACCTGATCCAGCTGGTGTCGGAGACGCTGATGGCGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGCGGATATCACTGCAGCTGACGCCGCTGGTGCAGACGGACATCCTCTCCCTGACAGTGAGCCGGTCGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGACTCTGAGAATGTCTGCTTCTGTTATGGAATTCAAAATTATGTTGGGCATTACCCGTAACCCTTGTGCAGGCGCAAACATATGGAGAGACTGAAGATTGGTCACTTGTAGTTGTAGTACCTATTTTTTTTTTTCGTTCTTTTTTTTTTTGGGTCGAAAACCAGGAGTTGTTTTACCTGTTATGAAGATTTCAGAGTTTTAGAATTCAAAAGTTCCTGACGTGTAAGTATTTGTCATGCCATTTGAAAATCTCTAGTTTGAAGTTTAACTCTTTCCCTTGGAAAGCTTCTGTAACTTTTGAACCAGAGTTTGGAGCTGTATATTGGGAGCTCTTGAGGTATGAACCAGACATTTACATGATATTCCAATGTTATAAAA] [-] EMBL CB644096 [ ACAACATAAGGTGCGACCTGATCCAGCTGGTGTCGGAGACGCTGATGGCGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGCGGATATCACTGCAGCTGACGCCGCTGGTGCAGACGGACATCCTCTCCCTGACAGTGAGCCGGTCGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATGGGTTTAATTTTTTTTAATGATTACTTAATCAAaaaaaaaaa ] [-] EMBL CB669694 [ GTGCGACCTGATCCAGCTGGTGTCGGAGACGCTGATGGCGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGCGGATATCACTGCAGCTGACGCCGCTGGTGCAGACGGACATCCTCTCCCTGACAGTGAGCCGGTCGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGACTCTGAGAATGTCTGC ] [-] EMBL CB648428 [ GTCGGAGACGCTGATGGCGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGCGGATATCACTGCAGCTGACGCCGCTGGTGCAGACGGACATCCTCTCCCTGACAGTGAGCCGGTCGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGACTCTGAGAATGTCTGCTTCTGTTATGGAATTCAAAATTATGTTGGGCATTACCCGTA ] consensusID : consensus_13284#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 736 fasta sequence [AGCCCTGAATCTACACATTATCTGAAAAATACTTTGCAATCTTGGCAAACTACACAATGATGGAGTTCATAAAGCTGGAACTCTTCTTCATCCATGGCTTCTGCCGCTGCTCCTGACATCTGGCACTGGACCACAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCATATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCACGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAACCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCATGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTG] [+] EMBL CB669695 [AGCCCTGAATCTACACATTATCTGAAAAATACTTTGCAATCTTGGCAAACTACACAATGATGGAGTTCATAAAGCTGGAACTCTTCTTCATCCATGGCTTCTGCCGCTGCTCCTGACATCTGGCACTGGACCACAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCATATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCACGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGGTGCTGCGAAGAACCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCATGTGGCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTG] [+] EMBL CB639739 [ GCACTGAATCT CACATTATCTGAAAAATACTTTGCAATCTTGGCAAACTAGACAATGATGGAGTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGTTGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTG ] consensusID : consensus_13284#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 689 fasta sequence [GGGGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGAGGATATCCATGCAGTTGACGCCGGTGGTGCAGACGGACATCCTCTCCATGACAGTGAGCCGGTTGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGAAAAAAAAAAGA] [-] EMBL CB661967 [GGGGAAGCAGGGCTACGGCTCCGACGAGAAGCACTTCCCGTCGAGGATATCCATGCAGTTGACGCCGGTGGTGCAGACGGACATCCTCTCCATGACAGTGAGCCGGTTGACGGACAACCCCGCCCAGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCTCAGCGCAGCACCGGCGACCATCGGCATCACCATGTCGGCGCACGAGACGGTGACGAGGACACTCCGGCCATGGAAGTTCGAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAGGGCAGGGAGGTGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAGCCGCGGTCATGGTTCAGGAACCGGTACACCAACCCGGGCAGGCCGTTCACCAGGGGCGGCGGCGTGATCTTCGCCGGCGATGAGTACGGCGAGAGCGTTTGCTGGAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAGGATATGGGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGTTGAGACCAGGAGGGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATCTGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGAAAAAAAAAAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13284#0 CTCTACTGAAAGATGTACTGGTTTTGAGAGCACTGAATCTACACATTATCTGAAAAATAC 60 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TTTGCAATCTTGGCAAACTAGAGTTATAGTTGTTCTCAACTTGCTTTCTTATTGGTAAAA 120 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 AAGTTGACTTTTGCCATCTTTTGTGTTCTAATTCACTTTTTGTATCTGTATTTAATTTCT 180 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TGGACAGCAATGATGGAGTTCATAGAGCTGGAGCTCTTCTTCATCCATGGCTTCTGCCGT 240 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TGCTCCTGACATCTGGCACTGGACCAGAAGCCTCCCCAACCCCAAGCACTGGAGGGGAAA 300 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 ATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAGTCTCTGAACCTCATCAT 360 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 CAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCCATCTGTGCTGAACACCA 420 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAATCTGTTAATGGCTCAGA 480 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTCAGGTATGGCCCTTACTC 540 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 CAACAAGATGTCACCCTTCAGGCTGCCAAATGTTCAGGTATCTGAAGATACAGGCAAAAT 600 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 CTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATCTACGAAGCTCCGTCCAC 660 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 CCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATACGCGGCGACATGTGGGG 720 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TGCTGCGAAGAAGCTGATGCTTGCCATGGGGTCAGACATGGAGGAGCAGTGGATGCGGTC 780 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 ACTGAACCTCGCCGTCACCAACTGGATCATAGAGACTCGCCGGTCAGGTGGCACGCCGGT 840 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 GTCGCCTTTCACGGTCTTCTCCTACGCTGTCTCGGCGATCAGGCTGTGGAAGGTGGAGCT 900 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 GTACTGCCCAGTGGTCGCCATGATCATGGAGCACCCGGCTCATCAGACGAAAGATGAGAA 960 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 GCTGCAGTTCTCGCTGAACTACCAGCATCTGGAGGCCGTGATCCAGTTCATCTACAGAGT 1020 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 CACCTTCAGGGAGAACTGGATCGACGTCACCGTCAACGTCGACAACATAAGGTGCGACCT 1080 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 GATCCAGCTGGTGTCGGAGACGCTGATGGCGAAGCAGGGCTACGGCTCCGACGAGAAGCA 1140 consensus_13284#2 ---------------------------GGGGAAGCAGGGCTACGGCTCCGACGAGAAGCA 33 consensus_13284#1 -----------------------------AGCCCTGAATCTACACATTATCTGAAAAATA 31 * **** * ** ** * consensus_13284#0 CTTCCCG-TCGCGGATATCACTGCAGCTGACGCCGCTGGTGCAGACGGACATCCTCTCCC 1199 consensus_13284#2 CTTCCCG-TCGAGGATATCCATGCAGTTGACGCCGGTGGTGCAGACGGACATCCTCTCCA 92 consensus_13284#1 CTTTGCAATCTTGGCAAACTACACAA-TGATGGAGTTCATAAAGCTGGAACTCTTCTTCA 90 *** * ** ** * * ** *** * * * * ** *** ** *** * consensus_13284#0 T-----------------------GACAGTGAGC--CGGTCGACGGACAACCCCG--CCC 1232 consensus_13284#2 T-----------------------GACAGTGAGC--CGGTTGACGGACAACCCCG--CCC 125 consensus_13284#1 TCCATGGCTTCTGCCGCTGCTCCTGACATCTGGCACTGGACCACAAGCCTCCCCAACCCC 150 * **** ** ** ** * **** *** consensus_13284#0 AGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCT-CAGCGCAGCACCGGCGA-CCAT 1290 consensus_13284#2 AGGAGGTCGACACAGAGATGGGCCTCGACGCGACGCT-CAGCGCAGCACCGGCGA-CCAT 183 consensus_13284#1 AAGCACTGGAGGGGAAAATCCTACTATCTTCAAATCTGCAACTCTCCATCAACAAACCAG 210 * * * ** * ** ** * * ** ** * * ** * * * *** consensus_13284#0 CGGCATCACCATGTCGGCGCACGAGACGGTGA--CGAGGACACTCCGGCCATGGAAGTTC 1348 consensus_13284#2 CGGCATCACCATGTCGGCGCACGAGACGGTGA--CGAGGACACTCCGGCCATGGAAGTTC 241 consensus_13284#1 TCTCTGAACCTCATCATCAGCTGGCACTCTGAAACCCAATCCTTCAATCTGTCTTACTCC 270 * *** ** * * ** *** * * ** * * * * * consensus_13284#0 GAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAG 1408 consensus_13284#2 GAGCACTCGGTGCACGGCAACACGGCGGCGCTGAACTGGTTCCTGCACGGCGGCGCGGAG 301 consensus_13284#1 ATCTGTGCTGAACACCATGATCCAGTCTCACTCTGGAGCTCCCATTATTCCAGATTGAAA 330 * * *** * * * * ** * * ** * * * * * consensus_13284#0 GGCAGGGAGG-----TGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAG---CCGC 1460 consensus_13284#2 GGCAGGGAGG-----TGTTCTCCAGCGAGCCGCACAAGCGGGAGCTGCTCCAG---CCGC 353 consensus_13284#1 TCTGTTAATGGCTCATATTTTGCCATCCATTTCTTCCACGATATCATCTGCGGGGTCCTC 390 * * * ** * * * ** * * ** * * ** * consensus_13284#0 GGTCATGGTTCAGGAACCGGTA------CACCAACCCGG--GCAGGCCGTTCA-----CC 1507 consensus_13284#2 GGTCATGGTTCAGGAACCGGTA------CACCAACCCGG--GCAGGCCGTTCA-----CC 400 consensus_13284#1 AGGTATGGCCCTTACTCCAACAAGATGTCACCCTTCACGCTGCCAAATGTTCAGGTATCT 450 * **** * ** * **** * * ** ***** * consensus_13284#0 AGGGGCGGCGGCGTGATCTTCG--CCGGCGATGAGTACGGCGAGAGC----GTTTGC-TG 1560 consensus_13284#2 AGGGGCGGCGGCGTGATCTTCG--CCGGCGATGAGTACGGCGAGAGC----GTTTGC-TG 453 consensus_13284#1 GAAGATACAGGCAAAATCTTCAACCTGGCAGCACTCACTCTTGCACTCATGGTCTGCATC 510 * *** ****** * *** ** * ** *** * consensus_13284#0 GAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAG--GATA 1618 consensus_13284#2 GAGGATGCCCGCCGCGGCGGCGGGCAAGACGGTGGAGTGGGAGATGAAGGGGAG--GATA 511 consensus_13284#1 TACGAAGCTCCGTCCACCCTCCGACGAGACCTCATCGGCACGGTCAGTGCGCAGCTGATA 570 * ** ** * * * * * * **** * * * * ** **** consensus_13284#0 TG-GGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGT--TGAGACCAG----GAG 1671 consensus_13284#2 TG-GGTGACGTACTGGCCAAACAAGAAGAGGACGCTGCATGT--TGAGACCAG----GAG 564 consensus_13284#1 CGCGGCGACATGTGGGGTGC-TGCGAAGAACCTGATGCTTGCCATGGGGTCAGACATGGA 629 * ** *** * ** ***** * *** ** ** * *** * consensus_13284#0 GGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATC 1731 consensus_13284#2 GGTCGAGTTCAGAGAGCTACTGCGTCTCACCATCAGAGAGTAGACCAATTTGTCATCATC 624 consensus_13284#1 GGAGCAGTGGATGCGGTCACTGAACCTCGCCGTCACCAACTGGATCA--TAGAGACTCGC 687 ** *** * * **** *** ** *** * * ** ** * * * * consensus_13284#0 TGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGACTCTGA 1791 consensus_13284#2 TGGTTTCATATTTGAAAATTGTTTTAATTTTTTTTAATGATTACTTAATCAAGAAAAAAA 684 consensus_13284#1 CGGTCATGTG---GCACGCCGGTGTCGCCTTTCACGGTCTTCTCCTACGCTG-------- 736 *** * * * * * * *** * * * ** * consensus_13284#0 GAATGTCTGCTTCTGTTATGGAATTCAAAATTATGTTGGGCATTACCCGTAACCCTTGTG 1851 consensus_13284#2 AAAGA------------------------------------------------------- 689 consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 CAGGCGCAAACATATGGAGAGACTGAAGATTGGTCACTTGTAGTTGTAGTACCTATTTTT 1911 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TTTTTTCGTTCTTTTTTTTTTTGGGTCGAAAACCAGGAGTTGTTTTACCTGTTATGAAGA 1971 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TTTCAGAGTTTTAGAATTCAAAAGTTCCTGACGTGTAAGTATTTGTCATGCCATTTGAAA 2031 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 ATCTCTAGTTTGAAGTTTAACTCTTTCCCTTGGAAAGCTTCTGTAACTTTTGAACCAGAG 2091 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TTTGGAGCTGTATATTGGGAGCTCTTGAGGTATGAACCAGACATTTACATGATATTCCAA 2151 consensus_13284#2 ------------------------------------------------------------ consensus_13284#1 ------------------------------------------------------------ consensus_13284#0 TGTTATAAAA 2161 consensus_13284#2 ---------- consensus_13284#1 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||