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Oryza sativa
cluster # 13292 cluster # 13292       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13292#0 length = 1725 sequences # 4  
consensus_13292#1 length = 1253 sequences # 8  

consensusID : consensus_13292#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1725
fasta sequence
                              [CATGGACTGAGGGAGTAGAAAATGTCCTGTACTCATGTACTCCTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGACTCTTGAACTACTATAAGTTATTTAGATAATCATGAAAAGATACATGTCTGATTAATCAGGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAGGCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCCTTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGTATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAATGCTAAGTGTCACGATACTTGCCTTTATAATTGGTAACTGCAATTCTTCATCTTTCCATTTGCGCATGAAGAGGGACACAAGATAACCAGATAGTTCGCTAAGAAAAATTTAATTGTTAATTAATTTTGTTTTAGGGAAATAAATTAACTGGTTGTACAATGGAGTTTAAAAGAAAGTTTACCCGTTGTTAATTGGAACATTTGGTAGAATTATTTGACGCCATAGGTTGATATCCTCGTTCCATCTTGACCCAAGGCATGCTTTTGCCATTGCTTTTGGCAAGTGTTTGGCAATCCATAGTAGTTTTTTGACATATCTTGCATTTGGGTTGTTCTCATAAATTGGTTCAAGCGGAGTCGGGTCTAATATATAGACGTTTCTGGTATCTTGGTCCAATACGATCAAAATGAAAAATTTATAGAATTCTATTGGCATAAGAATCTGTAAAAGCTAACTGTTAGGATAGAAAAAAATCATGGCCATGATGAGCAAATGGAAGAGAACTTACCAATCTGCATTTTGAAATTTTGTAGTCAATCCCAGGCCAATTACAAACTGACTTTGCTAGCCGTTCAGTGTCGAGCTTTTGACGAAAGTTTGGGTGTTGTCCAAAATTGGTAGTCATCTTTGTATATAATTGTGCAAAAATGATATACAACATGAGGCAAAGGGGATAATACATGTGATTATAAAGGCATACTCAAAATTGCAAAACGGAATAATACACGTGA]

[+] EMBL CF312491             [CATGGACTGAGGGAGTAGAAAATGTCCTGTACTCATGTACTCCTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF337421             [                                      ACTCCTGTCTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGT GAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK111402             [                                           TGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGACTCTTGAACTACTATAAGTTATTTAGATAATCATGAAAAGATACATGTCTGATTAATCAGGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAGGCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCCTTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGTATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAATGCTAAGTGTCACGATACTTGCCTTTATAATTGGTAACTGCAATTCTTCATCTTTCCATTTGCGCATGAAGAGGGACACAAGATAACCAGATAGTTCGCTAAGAAAAATTTAATTGTTAATTAATTTTGTTTTAGGGAAATAAATTAACTGGTTGTACAATGGAGTTTAAAAGAAAGTTTACCCGTTGTTAATTGGAACATTTGGTAGAATTATTTGACGCCATAGGTTGATATCCTCGTTCCATCTTGACCCAAGGCATGCTTTTGCCATTGCTTTTGGCAAGTGTTTGGCAATCCATAGTAGTTTTTTGACATATCTTGCATTTGGGTTGTTCTCATAAATTGGTTCAAGCGGAGTCGGGTCTAATATATAGACGTTTCTGGTATCTTGGTCCAATACGATCAAAATGAAAAATTTATAGAATTCTATTGGCATAAGAATCTGTAAAAGCTAACTGTTAGGATAGAAAAAAATCATGGCCATGATGAGCAAATGGAAGAGAACTTACCAATCTGCATTTTGAAATTTTGTAGTCAATCCCAGGCCAATTACAAACTGACTTTGCTAGCCGTTCAGTGTCGAGCTTTTGACGAAAGTTTGGGTGTTGTCCAAAATTGGTAGTCATCTTTGTATATAATTGTGCAAAAATGATATACAACATGAGGCAAAGGGGATAATACATGTGATTATAAAGGCATACTCAAAATTGCAAAACGGAATAATACACGTGA]
[-] EMBL CF312490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGACTCTTGAACTACTATAAGTTATTTAGATAATCATGAAAAGATACATGTCTGATTAATCAGGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAGGCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCCTTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGTATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAAaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_13292#0 CATGGACTGAGGGAGTAGAAAATGTCCTGTACTCATGTACTCCTGTTTCCCCCAATTCCT TCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCC CCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGG CGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGG CCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGT CCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTG GATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACC AGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGT GTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACG GGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTC AGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGT GGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGA CTCTTGAACTACTATAAGTTATTTAGATAATCATGAAAAGATACATGTCTGATTAATCAG GTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAGG CATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCCT TAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGTA TGTGTAAAAAGGTAGTAGCATTTAAATAGTCAATGCTAAGTGTCACGATACTTGCCTTTA TAATTGGTAACTGCAATTCTTCATCTTTCCATTTGCGCATGAAGAGGGACACAAGATAAC CAGATAGTTCGCTAAGAAAAATTTAATTGTTAATTAATTTTGTTTTAGGGAAATAAATTA ACTGGTTGTACAATGGAGTTTAAAAGAAAGTTTACCCGTTGTTAATTGGAACATTTGGTA GAATTATTTGACGCCATAGGTTGATATCCTCGTTCCATCTTGACCCAAGGCATGCTTTTG CCATTGCTTTTGGCAAGTGTTTGGCAATCCATAGTAGTTTTTTGACATATCTTGCATTTG GGTTGTTCTCATAAATTGGTTCAAGCGGAGTCGGGTCTAATATATAGACGTTTCTGGTAT CTTGGTCCAATACGATCAAAATGAAAAATTTATAGAATTCTATTGGCATAAGAATCTGTA AAAGCTAACTGTTAGGATAGAAAAAAATCATGGCCATGATGAGCAAATGGAAGAGAACTT ACCAATCTGCATTTTGAAATTTTGTAGTCAATCCCAGGCCAATTACAAACTGACTTTGCT AGCCGTTCAGTGTCGAGCTTTTGACGAAAGTTTGGGTGTTGTCCAAAATTGGTAGTCATC TTTGTATATAATTGTGCAAAAATGATATACAACATGAGGCAAAGGGGATAATACATGTGA TTATAAAGGCATACTCAAAATTGCAAAACGGAATAATACACGTGA



consensusID : consensus_13292#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1253
fasta sequence
                              [CTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC-GGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG-AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA-AGACA-GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA-ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC-TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAAGAGAAAAAAACCGTGCGGGGAAGAGCGATCTGGGTGGGAATCGGAGTTGGAAAACAAAATCGCTACGGATGCGATTTGAGAAAAAAAAACTTTGCGAGAAAAAAACCTGCGCTAAAAAAACCGTATGCTATTGGGAGTCGGAAAAAAAAACATGCGAAAAAAAAA]

[+] EMBL AK068024             [CTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC GGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAAGAGAAAAAAA                                                                                                                                                           ]
[+] EMBL OSS1864A             [                 TTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAG TCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC GGTAATCACTGGATCTNGGGTCTCCGCGGCTGGATG CCTCTCCTGCTTCGTCGTTGCGGTNGNAAT AACAGATTTGGGGCCTNTNCG CTGGATT NGTTAATGGG AGTTTT GAGCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK060062             [                    CCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC GGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGT                                                                                                                                                                                                                                                                       ]
[+] EMBL CF305390             [                                                                                                                                                               GGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCATCTGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU097081             [                                                                                                                                                                                                                                                                                                                                                                                                                  ATCCGTTTGATGGGAATTTTTGAACCGAGGATGGAAGTTTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCNACGGGTTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGTTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGAaaaaaa                                                                                                                                                                             ]
[+] EMBL BI810194             [                                                                                                                                                                                                                                                                                                                                                                                                                                        GAGCGAGGATGGAGGTGT TTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTT CA GCAGCATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGTGCGAAATTGGATCCCAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCACAGACACGGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACACATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCAC AGAACGAATTTTATTTGTGGTACCCGTTTTGTTTGTATATATAGGAGGATAGGATGTAaaaaaaaaa                                                                                                                                                                                                                                                                               ]
[+] EMBL OS0990A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAG TCTTAGAATGTCTTTTTGATCANA CACAAGACCGAATTTTATTTGTG                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF317962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAAGAGAAAAAAACCGTGCGGGGAAGAGCGATCTGGGTGGGAATCGGAGTTGGAAAACAAAATCGCTACGGATGCGATTTGAGAAAAAAAAACTTTGCGAGAAAAAAACCTGCGCTAAAAAAACCGTATGCTATTGGGAGTCGGAAAAAAAAACATGCGAAAAAAAAA]


>consensus_13292#1 CTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCA TGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTC CCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCA GTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATAC TTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCC TTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTC GTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTT TGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCA TCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGG TGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTG CTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAA ATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGT GATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCAAGACAGGA GATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACAATTGAAGTTGTTC ACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTCT TTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGG AGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGG TGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGAT CTGAGAAAGAGAAAAAAACCGTGCGGGGAAGAGCGATCTGGGTGGGAATCGGAGTTGGAA AACAAAATCGCTACGGATGCGATTTGAGAAAAAAAAACTTTGCGAGAAAAAAACCTGCGC TAAAAAAACCGTATGCTATTGGGAGTCGGAAAAAAAAACATGCGAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13292#0      CATGGACTGAGGGAGTAGAAAATGTCCTGTACTCATGTACTCCTGTTTCCCCCAATTCCT 60
consensus_13292#1      ------------------------------------------CTGTTTCCCCCAATTCCT 18
                                                                 ******************

consensus_13292#0      TCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCC 120
consensus_13292#1      TCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCC 78
                       ************************************************************

consensus_13292#0      CCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGG 180
consensus_13292#1      CCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGG 138
                       ************************************************************

consensus_13292#0      CGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGG 240
consensus_13292#1      CGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGG 198
                       ************************************************************

consensus_13292#0      CCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGT 300
consensus_13292#1      CCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGT 258
                       ************************************************************

consensus_13292#0      CCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTG 360
consensus_13292#1      CCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTG 318
                       ************************************************************

consensus_13292#0      GATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACC 420
consensus_13292#1      GATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACC 378
                       ************************************************************

consensus_13292#0      AGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGT 480
consensus_13292#1      AGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGT 438
                       ************************************************************

consensus_13292#0      GTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACG 540
consensus_13292#1      GTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACG 498
                       ************************************************************

consensus_13292#0      GGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTC 600
consensus_13292#1      GGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTC 558
                       ************************************************************

consensus_13292#0      AGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGT 660
consensus_13292#1      AGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGT 618
                       ************************************************************

consensus_13292#0      GGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGA 720
consensus_13292#1      GGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGA----TCCAAGAG 674
                       ***********************************************     ** * *  

consensus_13292#0      CTCTTGAACTACTATAAGTTATTTAG-ATAATCATGAAAAGATACATGTCTGATTAATCA 779
consensus_13292#1      TGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAG-----CATGTGTGAT------ 723
                                *  *  *  *    * * *  * *** **      ***** ****      

consensus_13292#0      GGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAG 839
consensus_13292#1      -GGAGCTGTGCATTTATAT-TGTGATAGGA-ACTCAGAAAC------TTCAACTACCAAG 774
                        * **      ** *** * * ***   ** **  **** *       * *       **

consensus_13292#0      GCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCC 899
consensus_13292#1      ACAGG--------AGATCAAGATGTCTAG------AATGGCATTGTGAATTTGTGAT-CC 819
                        **          * **  *      * *      *** *   *   **    ** * **

consensus_13292#0      TTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGT 959
consensus_13292#1      TCAATACA-ATTGAAGTTGTTCACGGAGCTGCTCTTG-----GCACGATG-----GCTTC 868
                       * *   ** **  *   ***  * * *  *  *  **     * ** * *      **  

consensus_13292#0      ATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAATGCTAAGTGTCACGATACTTGCCTTT 1019
consensus_13292#1      TTTGGTGATGGAGCAG-AGCTCTTAGAATGTCTTTTGATCACACCACAAGAACGAATTTT 927
                        *  ** *    * ** ***  *** *  ***  *         *** * *      ***

consensus_13292#0      ATAATTGGTAACTGCAATTCTTCATCTTTCCATTTGCGCATGAAGAGGGACACAAGATAA 1079
consensus_13292#1      ATTTGTGGTA---CCAGTTTTGTTTGTATATATAGGAGGAT-AGGATGTATGCAGCGTTC 983
                       **   *****    ** ** *   * * *  **  * * ** * ** * *  **   *  

consensus_13292#0      CCAGATAGTTCGCTAAGAAAAATTTAATTGTTAATTAATTTTGTTTTAGGGAAATAAATT 1139
consensus_13292#1      TTGTGGTGTTCG------GATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTT 1037
                              *****       *  *  *****    **  *** ** ** **  *   * **

consensus_13292#0      AACTGGTTGTACAATGGAGTTTAAAAGAAAGTTTACCCGTTGTTAATTGGAACATTTGGT 1199
consensus_13292#1      ----GGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAA--GAG 1091
                           ** **   *  *****   *** *** **    **      **  **  *   *  

consensus_13292#0      AGAATTATTTGACGCCATAGGTTGATATCCTCGTTCCATCTTGACCCAAGGCATGCTTTT 1259
consensus_13292#1      AAAAAAACCGTGCGGGGAAGAGCGAT--CTGGGTGGGAATCGGAGTTGGAAAACAAAATC 1149
                       * **  *     **    **   ***  *   **   *    **        *     * 

consensus_13292#0      GCCATTGCTTTTGGCAAGTGTTTGGCAATCCATAGTAGTTTTTTGACATATCTTGCATTT 1319
consensus_13292#1      GCTACGGAT----GCGA---TTTGAGAAAAAAAAACTTTGCGAGAAAAAAACCTGCGCTA 1202
                       ** *  * *    ** *   ****  **   * *    *      * * * * ***  * 

consensus_13292#0      GGGTTGTTCTCATAAATTGGT--TCAAGCGGAGTCGGGTCTAATATATAGACGTTTCTGG 1377
consensus_13292#1      AAAAAACCGTATGCTATTGGGAGTCGGAAAAAAAAACATGCGAAAAAAAAA--------- 1253
                                *     *****   **      *      *   * * * * *         

consensus_13292#0      TATCTTGGTCCAATACGATCAAAATGAAAAATTTATAGAATTCTATTGGCATAAGAATCT 1437
consensus_13292#1      ------------------------------------------------------------
                                                                                   

consensus_13292#0      GTAAAAGCTAACTGTTAGGATAGAAAAAAATCATGGCCATGATGAGCAAATGGAAGAGAA 1497
consensus_13292#1      ------------------------------------------------------------
                                                                                   

consensus_13292#0      CTTACCAATCTGCATTTTGAAATTTTGTAGTCAATCCCAGGCCAATTACAAACTGACTTT 1557
consensus_13292#1      ------------------------------------------------------------
                                                                                   

consensus_13292#0      GCTAGCCGTTCAGTGTCGAGCTTTTGACGAAAGTTTGGGTGTTGTCCAAAATTGGTAGTC 1617
consensus_13292#1      ------------------------------------------------------------
                                                                                   

consensus_13292#0      ATCTTTGTATATAATTGTGCAAAAATGATATACAACATGAGGCAAAGGGGATAATACATG 1677
consensus_13292#1      ------------------------------------------------------------
                                                                                   

consensus_13292#0      TGATTATAAAGGCATACTCAAAATTGCAAAACGGAATAATACACGTGA 1725
consensus_13292#1      ------------------------------------------------
                                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)