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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13329#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1835 fasta sequence
[GGCCGGGGAAAATATCTGAAACGACGGTACGCGAGCGCCCACGGGGGCCACGGCTGTGCGCGCCTGTGCCGGTGGCCCGGTGCTGGATCTCACCGGGCGCGCGCGTGGCTGCGTACTGTGCCGCGCGCGGAGTCACCCATGCACGCCGTGAACTGGTCGAATGAGATGGATCACGTTCACGTGCAGGCAGGCAGGACGCCGGAAAGGGATCGGGAGCGCGAAAGTGAGCTGTGTCTAAGCTCGGTTTCTCGTTAGAAATGCGCGAATAATTCGGTCCATTAGCTAAGCTAGCTGGCTGCTGCTGCTTCCGCTGTGGTGTGGCCTATGACTGGATGGCGACCCGTGCCGTGTCGTACTCGTGCTCGTGATCGCGTCGTTGTCTCTCGCGCGGGATGGACACGACTGATCTACTGGTCTCTGCAACGTTTTAACGGTCGACGTTCACCATGCATGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATC-GATAACAATAAAATCATATATAGTGTTGATGAAAAAAAAAGAAAAAAAAAAA]
[+] EMBL AK071869 [GGCCGGGGAAAATATCTGAAACGACGGTACGCGAGCGCCCACGGGGGCCACGGCTGTGCGCGCCTGTGCCGGTGGCCCGGTGCTGGATCTCACCGGGCGCGCGCGTGGCTGCGTACTGTGCCGCGCGCGGAGTCACCCATGCACGCCGTGAACTGGTCGAATGAGATGGATCACGTTCACGTGCAGGCAGGCAGGACGCCGGAAAGGGATCGGGAGCGCGAAAGTGAGCTGTGTCTAAGCTCGGTTTCTCGTTAGAAATGCGCGAATAATTCGGTCCATTAGCTAAGCTAGCTGGCTGCTGCTGCTTCCGCTGTGGTGTGGCCTATGACTGGATGGCGACCCGTGCCGTGTCGTACTCGTGCTCGTGATCGCGTCGTTGTCTCTCGCGCGGGATGGACACGACTGATCTACTGGTCTCTGCAACGTTTTAACGGTCGACGTTCACCATGCATGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGGGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATC GATAA ]
[-] EMBL CB649147 [ CGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTTTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTTGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATG GATAACAATAAAATCATATATAGTGTTGATGAAAAAAAAAGA ]
[-] EMBL CB678745 [ TCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACTCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGGTACAACTGGACGCCCTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTTGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACCCCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGTCGGTGCAGGGGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCCCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGGGTTCCCCTAGTCGCTGGCATCCAGTTTGCCTTTTTCAACGATGGCGAGGAACGGGCGTGGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTGTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATC GATACCAATAAAATCATATATAGTGTTGTCGAACAAAAAggga ]
[+] EMBL AU096501 [ AAGAANATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTNTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCNCTAGGTTGTTTTCCANCGATACCNACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCNAGTCATGTAACNCAGTGGAAATTCGATTGGAACNATCTGATAACAATAAAATCATATATAGTGTTGATTNAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_13329#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1701 fasta sequence
[GCGCGCGGTACGGTAGGCACCAGCTATACAGCGCGCCACACACAACAATGGCCGGCGCTACCGCTGCCGCCGTCTCCTCCTCCTTCCTCGCGCTCGCGTTGCTCTCGCTCTGCGCCGCGGCCGCTGGCGGCTCGCCTCAGCTGGACGCGGAGGCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCGTGCGGTTCGCGCAGTACGCCGGGTACGTGACGGTGAACGAGACGCACGGCCGCGCGCTCTTCTACTGGTTCTTCGAGGCCACCGCCGCCGCCGACAAGAAGCCCCTCGTCCTCTGGCTCAACGGCGGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATCGATAACAATAAAATCATATATAGTGTTGATTGATTTC]
[+] EMBL AK069959 [GCGCGCGGTACGGTAGGCACCAGCTATACAGCGCGCCACACACAACAATGGCCGGCGCTACCGCTGCCGCCGTCTCCTCCTCCTTCCTCGCGCTCGCGTTGCTCTCGCTCTGCGCCGCGGCCGCTGGCGGCTCGCCTCAGCTGGACGCGGAGGCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCGTGCGGTTCGCGCAGTACGCCGGGTACGTGACGGTGAACGAGACGCACGGCCGCGCGCTCTTCTACTGGTTCTTCGAGGCCACCGCCGCCGCCGACAAGAAGCCCCTCGTCCTCTGGCTCAACGGCGGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACTTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATCGATAACAATAAAATCATATATAGTGTTGATTGATTTC]
[+] EMBL AK104431 [ CGCGCGGTACGGTAGGCACCAGCTATACAGCGCGCCACACACAACAATGGCCGGCGCTACCGCTGCCGCCGTCTCCTCCTCCTTCCTCGCGCTCGCGTTGCTCTCGCTCTGCGCCGCGGCCGCTGGCGGCTCGCCTCAGCTGGACGCGGAGGCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCGTGCGGTTCGCGCAGTACGCCGGGTACGTGACGGTGAACGAGACGCACGGCCGCGCGCTCTTCTACTGGTTCTTCGAGGCCACCGCCGCCGCCGACAAGAAGCCCCTCGTCCTCTGGCTCAACGGCGGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCGGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATCGATAACAATAAAATCATATATA ]
[+] EMBL AK106111 [ GCGGTACGGTAGGCACCAGCTATACAGCGCGCCACACACAACAATGGCCGGCGCTACCGCTGCCGCCGTCTCCTCCTCCTTCCTCGCGCTCGCGTTGCTCTCGCTCTGCGCCGCGGCCGCTGGCGGCTCGCCTCAGCTGGACGCGGAGGCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCGTGCGGTTCGCGCAGTACGCCGGGTACGTGACGGTGAACGAGACGCACGGCCGCGCGCTCTTCTACTGGTTCTTCGAGGCCACCGCCGCCGCCGACAAGAAGCCCCTCGTCCTCTGGCTCAACGGCGGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATCGATAACAATAAAATCATATATA ]
[+] EMBL AK104329 [ GCGGTACGGTAGGCACCAGCTATACAGCGCGCCACACACAACAATGGCCGGCGCTACCGCTGCCGCCGTCTCCTCCTCCTTCCTCGCGCTCGCGTTGCTCTCGCTCTGCGCCGCGGCCGCTGGCGGCTCGCCTCAGCTGGACGCGGAGGCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCGTGCGGTTCGCGCAGTACGCCGGGTACGTGACGGTGAACGAGACGCACGGCCGCGCGCTCTTCTACTGGTTCTTCGAGGCCACCGCCGCCGCCGACAAGAAGCCCCTCGTCCTCTGGCTCAACGGCGGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATCGATAACAATAAAA CATATATA ]
[+] EMBL CB649146 [ CAGCTATACAGCGCGCCACACACAACAATGGCCGGCGCTACCGCTGCCGCCGTCTCCTCCTCCTTCCTCGCGCTCGCGTTGCTCTCGCTCTGCGCCGCGGCCGCTGGCGGCTCGCCTCAGCTGGACGCGGAGGCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCGTGCGGTTCGCGCAGTACGCCGGGTACGTGACGGTGAACGAGACGCACGGCCGCGCGCTCTTCTACTGGTTCTTCGAGGCCACCGCCGCCGCCGACAAGAAGCCCCTCGTCCTCTGGCTCAACGGCGGGCCTGGGTGTTCGTCTGTTGGGTATGGAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGAACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCGGCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCA ]
[-] EMBL AU096387 [ CCTCAGCTGGACGCGGAGNCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCGTGCGGTTCGCGCAGTACNCCGGGTACGTGACGGTGAACGAGACGCACGGCCGCGCGCTCTTCTACNGGTTCTTCGAGGCCACCNCCGCCGCCGACAAGAAGCCCCTCGTCCTCNGGCTCAACNGCGGGCCTGGGTGTTCNTCTGTTGGGTATGGAGAAGCGGAGGANCTCGG ]
[+] EMBL CB654840 [ CCGATCCCCTTAAGGTTGGCGACAAGATCACCGCTGATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACGACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGATTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGATAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGGACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCATGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCCTCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGTTCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCC ]
[-] EMBL CB654841 [ GGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATGGGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACTTCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACTGGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCATCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATGGAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGCAGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGGGCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGCAGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCCCCTAGTCGCTCGCATGCAGTCTGCCTTTTTCAACGATGGCGAGGAACGGGCGTCGTGCGCCCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAAGACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATGGGTAACAATAAAATCATATATAGTGTTGATTGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13329#0 GGCCGGGGAAAATATCTGAAACGACGGTACGCGAGCGCCCACGGGGGCCACGGCTGTGCG 60
consensus_13329#1 ------------------------------------------------------------
consensus_13329#0 CGCCTGTGCCGGTGGCCCGGTGCTGGATCTCACCGGGCGCGCGCGTGGCTGCGTACTGTG 120
consensus_13329#1 ------------GCGCGCGGTAC-GGTAGGCACCAGCTATACAGCGCGCCACACACA--A 45
** **** * ** **** * * ** * **
consensus_13329#0 CCGCGCGCGGAGTCACCCATGCACGCCGTGAACTGGTCGAATGAGATGGATCACGTTCAC 180
consensus_13329#1 CAATGGCCGGCGCTACCGCTGC-CGCCGTCTCCTCCTCC-------TTCCTCGCGCTCGC 97
* * *** * *** *** ****** ** ** * ** ** ** *
consensus_13329#0 GTGCAGGCAGGCAGGACGCCGGAAAGGGATCGGGAGCGCGAAAGTGAGCTGTGTCTAAGC 240
consensus_13329#1 GT-TGCTCTCGCTCTGCGCCGCGGCCG--CTGGCGGCTCGC--CTCAGCTGGACGCGGA- 151
** * ** ***** * ** ** ** * *****
consensus_13329#0 TCGGTTTCTCGTTAGAAATGCGCGAATAATTCGGTCCATTAGCTAAGCTAGCTGGCTGCT 300
consensus_13329#1 --GGCCGCGCGGCAGCAGGAGGCCGACCGCGTGACGAGGCTGCCGGGGCAACCCGCCG-T 208
** * ** ** * ** * * ** * * * ** * *
consensus_13329#0 GCTGCTTCCGCTGTG-GTGTGGCCTATGACTGGATGGCGACCCGTGCCGTGTCGTACTCG 359
consensus_13329#1 GCGGTTCGCGCAGTACGCCGGGTACGTGAC-GGTGAACGAGACGCACGGCCGCGCGCTCT 267
** * * *** ** * ** **** ** *** ** * * ** ***
consensus_13329#0 TGCTCGTGATCGCGTCGTTGTCTCTCGCGCGGGATGGACACGACTGATCTACTGGTCTCT 419
consensus_13329#1 T-CTACTGGTT-CTTCGAGGCCACCGCCGCCG--CCGACAAGA---AGCCCCTCGTCCTC 320
* ** ** * * *** * * * *** * **** ** * * ** ***
consensus_13329#0 GCAACGTTTTAACGGTCGACGTTCACCATGCATGGCCTGGGTGTTCGTCTGTTGGGTATG 479
consensus_13329#1 ----TGGCTCAACGGCGG----------------GCCTGGGTGTTCGTCTGTTGGGTATG 360
* * ***** * **************************
consensus_13329#0 GAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGA 539
consensus_13329#1 GAGAAGCGGAGGAGCTCGGTCCATTCTTGGTGCAGAAGGGCAAGCCGGAGCTAAAATGGA 420
************************************************************
consensus_13329#0 ACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCG 599
consensus_13329#1 ACAAGTACTCGTGGAACAAAGAGGCCAATCTGATGTTCCTGGAGTCCCCTGTGGGTGTCG 480
************************************************************
consensus_13329#0 GCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTG 659
consensus_13329#1 GCTTCTCATACACTAACACAAGCTCCGATCTGCAGCAGCTTGGCGACAAGATCACCGCTG 540
************************************************************
consensus_13329#0 ATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACG 719
consensus_13329#1 ATGATGCTTACATCTTCCTGCTCAACTGGTTCAAGCGCTTCCCTCAGTACAAATCTCACG 600
************************************************************
consensus_13329#0 ACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGA 779
consensus_13329#1 ACTTCTACATCGCTGGAGAGAGCTACGCTGGGCATTACGTTCCACAGCTTTCGGAGAAGA 660
************************************************************
consensus_13329#0 TTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGA 839
consensus_13329#1 TTTTCGACGGCAACAAGCAAGGCCCCAAGGAGAACTACATCAACTTCAAGGGTTTCATGA 720
************************************************************
consensus_13329#0 TAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGG 899
consensus_13329#1 TAGGGAATGCCCTGATGGACGACGAGACGGACCAGACGGGCATGATCGACTACGCCTGGG 780
************************************************************
consensus_13329#0 ACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCA 959
consensus_13329#1 ACCACGCCGTCATCTCGGACCGGGTGTACGCCGACGTCAAGAAGTACTGCAACTTCAGCA 840
************************************************************
consensus_13329#0 TGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCC 1019
consensus_13329#1 TGGAGAACGTGACCGACGCGTGCGACAGCGCGCTCACCGAGTACTTCGCCGTGTACCGCC 900
************************************************************
consensus_13329#0 TCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGT 1079
consensus_13329#1 TCATCGACATGTACAGCCTCTACACCCCCGTCTGCACCGAGGTCTCGTCGTCGGCGGCGT 960
************************************************************
consensus_13329#0 TCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATG 1139
consensus_13329#1 TCGGCCAGCGCCAGGTCGCCGTCCACGGCGCCGCCCCAAAAATCTTCTCCAAATACCATG 1020
************************************************************
consensus_13329#0 GGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACT 1199
consensus_13329#1 GGTGGTACATGAGGCCGGCGGGGTACGATCCGTGCACGTCGGATCACGCCGAGGTGTACT 1080
************************************************************
consensus_13329#0 TCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACT 1259
consensus_13329#1 TCAACCGGGCTGACGTGCAGGAGGCGCTGCACGCCAACGTGACCAATATCGGCTACAACT 1140
************************************************************
consensus_13329#0 GGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCA 1319
consensus_13329#1 GGACGCACTGCAGCGACGTGATCGGCAAGTGGAGAGATGCTCCCTTCTCGACTCTCCCCA 1200
************************************************************
consensus_13329#0 TCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATG 1379
consensus_13329#1 TCATCCGTAAGCTCGTCGCCGGCGGCATCAGGGTCTGGGTTTTCAGCGGTGACACCGATG 1260
************************************************************
consensus_13329#0 GAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGC 1439
consensus_13329#1 GAAGGATCCCCGTGACGTCGACGAGGCTCACCCTGAACAAGCTTGGGCTGAAGACGGTGC 1320
************************************************************
consensus_13329#0 AGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGG 1499
consensus_13329#1 AGGAGTGGACGCCGTGGTACGACCATCAGCAGGTTGGAGGATGGACGATCCTCTACGAGG 1380
************************************************************
consensus_13329#0 GCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGC 1559
consensus_13329#1 GCCTGACGTTCGTGACGATCCGCGGCGCCGGGCACGAGGTTCCCCTGCACGCGCCGAGGC 1440
************************************************************
consensus_13329#0 AGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCC 1619
consensus_13329#1 AGGCGCTCAGCCTCTTCAGCCACTTCTTGGCTGACAAGAAGATGCCTCCGACGGCGTTCC 1500
************************************************************
consensus_13329#0 CCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGC 1679
consensus_13329#1 CCTAGTCGCTCGCATGCAGTCTGCCTTCTTCAACGATGGCGAGGAACGGGCGTCGTGCGC 1560
************************************************************
consensus_13329#0 CCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAA 1739
consensus_13329#1 CCACTAGGTTGTTTTCCAGCGATACCAACTGATCAGGAAATTTTCTTTTCTTTGGTCCAA 1620
************************************************************
consensus_13329#0 GACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATCGATAACAATAAAATCA 1799
consensus_13329#1 GACTCCAAGTCATGTAACACAGTGGAAATTCGATTGGAACAATCGATAACAATAAAATCA 1680
************************************************************
consensus_13329#0 TATATAGTGTTGATGAAAAAAAAAGAAAAAAAAAAA 1835
consensus_13329#1 TATATAGTGTTGATTGATTTC--------------- 1701
************** *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||