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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1334 cluster # 1334       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1334#0 length = 673 sequences # 2  

consensusID : consensus_1334#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 673
fasta sequence
                              [GTACTCGAGCAAAGAAGGATATAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTTTTTTTTTCAGCAATGGCGGCATGTTTATGTGCATGCAGGTGTGGCCGATANGTGGCATCAAGAAGTTCTAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCCGGTGCACTGACGCCACCCTAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCTGTATCATCGTCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCTACAAGCCCCCGGGCATGCGAGGAGTCTTGGTAGCAACTAAGSCGTCATCGTCATATATAGCCTTGTTTAAKTGGTCATCTSTGAGTTCGATGAGTSTCTCCCACCTATGATTTCGTGTGTTCCCAGTTTGTTCATCGTCTTT]

[+] EMBL CF279148             [GTACTCGAGCAAAGAAGGATATAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTTTTTTTTTCAGCAATGGCGGCATGTTTATGTGCATGCAGGTGTGGCCGATANGTGGCATCAAGAAGTTCTAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCCGGTGCACT                                                                                                                                                                                                                                                                     ]
[+] EMBL AA754334             [                                                                                                                                                                                                                                                                                                      gcTGCCCTGCCTCGAGTTCAGCAAGCTCGTATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGCACCATGTGGAAGCTGCCCATGTTCGAGTGCACTGACGCCACCCTAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCTGTATCATCGTCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCTACAAGCCCCCGGGCATGCGAGGAGTCTTGGTAGCAACTAAGSCGTCATCGTCATATATAGCCTTGTTTAAKTGGTCATCTSTGAGTTCGATGAGTSTCTCCCACCTATGATTTCGTGTGTTCCCAGTTTGTTCATCGTCTTT]


>consensus_1334#0 GTACTCGAGCAAAGAAGGATATAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGG CGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCG TCGCCCGCCGCTCCGGCAACTCCAGCTTTTTTTTTTCAGCAATGGCGGCATGTTTATGTG CATGCAGGTGTGGCCGATANGTGGCATCAAGAAGTTCTAGACCCTCTCCTACCTGCCACC GCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCC CTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATA CTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCCGGTGCACTGACGCCAC CCTAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCTGT ATCATCGTCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCTACAAGCCCC CGGGCATGCGAGGAGTCTTGGTAGCAACTAAGSCGTCATCGTCATATATAGCCTTGTTTA AKTGGTCATCTSTGAGTTCGATGAGTSTCTCCCACCTATGATTTCGTGTGTTCCCAGTTT GTTCATCGTCTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)