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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13340#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 3174 fasta sequence
[CCCATTTGCCACCCAACCCTACTACCCCCTTCTTCTCTCTCCCCTCTCGTCCTCGTCCGCTTCCAGATTCAGATCCACCCATCGTCGTCGTCCATGCCGCTCGCCTCCTTTTCTCCACTGTCGTAAGCCCTCCTCCTCCTCCTCCTCCCACGCCGCCGCCGCCGGTGCCCCCACTCGCCGCCGTGCGCGCGTCCCGTAGTTCGCCCCACCAGCGGCCGCCATGGCGCAGCCGCTCGTCGTGAAGAAGGACGACGATCTCGACGAGGAAGAGTACTACTCGCCGTTCCTCGGGATCGAGAAGGGCGCCGTCCTGCAGGAGGCCCGCGTCTTCCACGACCCGCAGCTCGACGCGCGCCGTTGCTGCCAGGTCATCACCAAGCTCCTATACCTGCTCAACCAGGGTGACACCTTCACCAAGGTGGAGGCCACAGAGGTCTTTTTTGCGACGACCAAGTTGTTTCAATCCAAGGATGCAGGCCTTAGGAGAATGGTGTACCTCATGATCAAGGAACTCTCCCCATCAGCAGATGAGGTTATCATCGTGACCAGCTCGTTGATGAAGGACATGAATAGCAAGACTGATATGTATCGAGCTAATGCAATAAGAGTTCTTTGCCGCATCATTGACTCAACACTTCTAACCCAAATTGAAAGATATTTGAAGCAAGCCATTGTTGACAAGAACCCTGTTGTTGCAAGCGCGGCCCTTGTTAGTGGCATCTACTTGCTTCAGACAAGTCCAGAAGTTGTGAAAAGGTGGAGCAATGAAGTTCAGGAGGCTGTACAGTCGAGAGCTGCTCTTGTTCAATTTCATGCCCTTGCTCTTCTTCACCAGATTAGGCAAAATGACCGGTTGGCTGTCAGCAAGCTTGTCACTAGTCTAACTAGGGGTTCTGTTCGCTCACCTCTGGCACAGTGCCTACTTATTCGGTACACTAGCCAGGTGATTAGAGAGTCAAGCATGAATAGTCAAGGTGGAGATCGCCCTTTCTTTGATTTCCTGGAGTCATGTCTCCGGAATAAAGCAGAAATGGTCATACTTGAGGCTGCAAGAGCGATAACTGAATTAAATGGCGTCACCAGCCGGGAGCTTACACCTGCAATTACCGTGCTGCAATTGTTCTTAAGTTCATCGAAACCTGTTCTCAGATTTGCTGCTGTTCGAACACTTAATAAGGTTGCATCAACTCATCCTTTGGCTGTCACCAATTGTAACATAGATATGGAGAGTCTAATATCTGATCAGAACAGGAGCATTGCTACCCTTGCAATTACAACACTACTTAAGACAGGCAATGAATCAAGTGTTGATCGCTTAATGAAGCAGATGACCAATTTTATGTCGGACATTGCCGATGAATTCAAGATTGTTGTCGTAGAGGCCATAAGATCCTTGTGCTTGAAGTTCCCCCTAAAATATCGGTCACTGATGAACTTTTTGAGTAATATCCTACGGGAAGAGGGTGGCTTTGAGTACAAGAAGGCTATTGTTGATTCAATTATCATACTCATTAGAGATATTCCTGATGCAAAAGAAAGTGGTTTATTTCACTTGTGTGAATTCATTGAAGATTGTGAGTTCACTTATATGTCTACTCAGATACTTCACTTTTTGGGAAATGAAGGTCCAAAGACATCAGATCCTAGTAAATACATACGTTATATATATAACAGAGTGATACTTGAAAATGCTACTGTTCGAGCTAGTGCTGTAAGTACTTTGGCAAAGTTCGGTGCATTGGTTGACTCACTCAAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGATGATGAGGTGCGTGACAGGGCCACGCTTTATCTCAAATTGCTTGGCGGGGAAGCTACAGTTGGTGAAACTGAGAAGGATGTGAATGAATTTCTCTTTGGTTCATTTGATATTCCACTAGTTAACCTGGAGACTAGCCTACAAAACTATGAACCATCAGAGGCACC-TTTTGATATTTCATCTGTATCTTTGGAAACTAAATCACAACCTCTTGCTGAGAAAAAGACTACGGGC-AAAAAGCCAACA-GGCCCAGCATCTGCTCTCAGCGGTCCAGTTCCTACTGTTGATGCCTCATATGAGAAGCTTCTTTCATCCATTCCTGAGTTTGCTGGTTTTGGAAAACTCTTTAAGTCATCAGCTCCTGTAGAATTGACCGAAGCTGAAACTGAATATTCAGTCAATGTTGTGAAGCACATTTATGACGGGCATGTTGTGCTCCAATACAATTGTACCAATACTATACCTGAACAGCTGCTTGAAGAGGTGGTGGTTTTTGTGGATGCTTCTGAGGCCGATGAATTTTCAGAAGTTGCAACGAAATCATTAAGATCCTTACCTTATGATTCACCAGGACAAACCTTTGTGGC-TTTTGAAAAGCTAGAAGGTGTCCTTGCTACT-GGGAAGTTCTCAAATATACTGAAATTTATTGTTAAAGAGGTTGATCCATCCACAGGTGAAGCTGATGATGATGGCGTTGAGGATAAGTACCAGCTTGAAGATCTGGAAATTACTTCTGCTGATTATATGTTGAAGGTTGGAGTTTCTAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCAGCCCTGCGAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGCTAGCAGTCAGATCAGATGATCCTGAGATCA-GTGACAAGATCCATG-AAATCGTTGCAAATGGCTAAATCTGATG-AAGAGGGTCACCCCTTTTTTGACC-TTTTTGTTTTTGGCTTTCACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTGGTTTTCCGTTGGATACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATATAACAATTTTTGATTGATTTGGAACCACATCATCAATTCCTTTATATATCAAGGATTTGACTAGTACATGCAATAATATATAGATGAAGTTATATCAATCAGATTGAGAGCTAC]
[+] EMBL AK100095 [CCCATTTGCCACCCAACCCTACTACCCCCTTCTTCTCTCTCCCCTCTCGTCCTCGTCCGCTTCCAGATTCAGATCCACCCATCGTCGTCGTCCATGCCGCTCGCCTCCTTTTCTCCACTGTCGTAAGCCCTCCTCCTCCTCCTCCTCCCACGCCGCCGCCGCCGGTGCCCCCACTCGCCGCCGTGCGCGCGTCCCGTAGTTCGCCCCACCAGCGGCCGCCATGGCGCAGCCGCTCGTCGTGAAGAAGGACGACGATCTCGACGAGGAAGAGTACTACTCGCCGTTCCTCGGGATCGAGAAGGGCGCCGTCCTGCAGGAGGCCCGCGTCTTCCACGACCCGCAGCTCGACGCGCGCCGTTGCTGCCAGGTCATCACCAAGCTCCTATACCTGCTCAACCAGGGTGACACCTTCACCAAGGTGGAGGCCACAGAGGTCTTTTTTGCGACGACCAAGTTGTTTCAATCCAAGGATGCAGGCCTTAGGAGAATGGTGTACCTCATGATCAAGGAACTCTCCCCATCAGCAGATGAGGTTATCATCGTGACCAGCTCGTTGATGAAGGACATGAATAGCAAGACTGATATGTATCGAGCTAATGCAATAAGAGTTCTTTGCCGCATCATTGACTCAACACTTCTAACCCAAATTGAAAGATATTTGAAGCAAGCCATTGTTGACAAGAACCCTGTTGTTGCAAGCGCGGCCCTTGTTAGTGGCATCTACTTGCTTCAGACAAGTCCAGAAGTTGTGAAAAGGTGGAGCAATGAAGTTCAGGAGGCTGTACAGTCGAGAGCTGCTCTTGTTCAATTTCATGCCCTTGCTCTTCTTCACCAGATTAGGCAAAATGACCGGTTGGCTGTCAGCAAGCTTGTCACTAGTCTAACTAGGGGTTCTGTTCGCTCACCTCTGGCACAGTGCCTACTTATTCGGTACACTAGCCAGGTGATTAGAGAGTCAAGCATGAATAGTCAAGGTGGAGATCGCCCTTTCTTTGATTTCCTGGAGTCATGTCTCCGGAATAAAGCAGAAATGGTCATACTTGAGGCTGCAAGAGCGATAACTGAATTAAATGGCGTCACCAGCCGGGAGCTTACACCTGCAATTACCGTGCTGCAATTGTTCTTAAGTTCATCGAAACCTGTTCTCAGATTTGCTGCTGTTCGAACACTTAATAAGGTTGCATCAACTCATCCTTTGGCTGTCACCAATTGTAACATAGATATGGAGAGTCTAATATCTGATCAGAACAGGAGCATTGCTACCCTTGCAATTACAACACTACTTAAGACAGGCAATGAATCAAGTGTTGATCGCTTAATGAAGCAGATGACCAATTTTATGTCGGACATTGCCGATGAATTCAAGATTGTTGTCGTAGAGGCCATAAGATCCTTGTGCTTGAAGTTCCCCCTAAAATATCGGTCACTGATGAACTTTTTGAGTAATATCCTACGGGAAGAGGGTGGCTTTGAGTACAAGAAGGCTATTGTTGATTCAATTATCATACTCATTAGAGATATTCCTGATGCAAAAGAAAGTGGTTTATTTCACTTGTGTGAATTCATTGAAGATTGTGAGTTCACTTATATGTCTACTCAGATACTTCACTTTTTGGGAAATGAAGGTCCAAAGACATCAGATCCTAGTAAATACATACGTTATATATATAACAGAGTGATACTTGAAAATGCTACTGTTCGAGCTAGTGCTGTAAGTACTTTGGCAAAGTTCGGTGCATTGGTTGACTCACTCAAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGATGATGAGGTGCGTGACAGGGCCACGCTTTATCTCAAATTGCTTGGCGGGGAAGCTACAGTTGGTGAAACTGAGAAGGATGTGAATGAATTTCTCTTTGGTTCATTTGATATTCCACTAGTTAACCTGGAGACTAGCCTACAAAACTATGAACCATCAGAGGCACC TTTTGATATTTCATCTGTATCTTTGGAAACTAAATCACAACCTCTTGCTGAGAAAAAGACTACGGGC AAAAAGCCAACA GGCCCAGCATCTGCTCTCAGCGGTCCAGTTCCTACTGTTGATGCCTCATATGAGAAGCTTCTTTCATCCATTCCTGAGTTTGCTGGTTTTGGAAAACTCTTTAAGTCATCAGCTCCTGTAGAATTGACCGAAGCTGAAACTGAATATTCAGTCAATGTTGTGAAGCACATTTATGACGGGCATGTTGTGCTCCAATACAATTGTACCAATACTATACCTGAACAGCTGCTTGAAGAGGTGGTGGTTTTTGTGGATGCTTCTGAGGCCGATGAATTTTCAGAAGTTGCAACGAAATCATTAAGATCCTTACCTTATGATTCACCAGGACAAACCTTTGTGGC TTTTGAAAAGCTAGAAGGTGTCCTTGCTACT GGGAAGTTCTCAAATATACTGAAATTTATTGTTAAAGAGGTTGATCCATCCACAGGTGAAGCTGATGATGATGGCGTTGAGGATAAGTACCAGCTTGAAGATCTGGAAATTACTTCTGCTGATTATATGTTGAAGGTTGGAGTTTCTAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCAGCCCTGCGAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGCTAGCAGTCAGATCAGATGATCCTGAGATCA GTGACAAGATCCATG AAATCGTTGCAAATGGCTAAATCTGATG AAGAGGGTCACCCCTTTTTTGACC TTTTTGTTTTTGGCTTTCACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTGGTTTTCCGTTGGATACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATATAACAATTTTTGATTGATTTGGAACCACATCATCAATTCCTTTATATATCAAGGATTTGACTAGTACATGCAATAATATATAGATGAAGTTATATCAATCAGATTGAGAGCTAC]
[+] EMBL CF325028 [ TCGTGAAGAAGGACGACGATCTCGACGAGGAAGAGTACTACTCGCCGTTCCTCGGGATCGAGAAGGGCGCCGTCCTGCAGGAGGCCCGCGTCTTCCACGACCCGCAGCTCGACGCGCGCCGTTGCTGCCAGGTCATCACCAAGCTCCTATACCTGCTCAACCAGGGTGACACCTTCACCAAGGTGGAGGCCACAGAGGTCTTTTTTGCGACGACCAAGTTGTTTCAATCCAAGGATGCAGGCCTTAGGAGAATGGTGTACCTCATGATCAAGGAACTCTCCCCATCAGCAGATGAGGTTATCATCGTGACCAGCTCGTTGATGAAGGACATGAATAGCAAGACTGATATGTATCGAGCTAATGCAATAAGAGTTCTTTGCCGCATCATTGACTCAACACTTCTAACCCAAATTGAAAGATATTTGAAGCAAGCCATTGTTGACAAGAACCCTGTTGTTGCAAGCGCGGCCCTTGTTAGTGGCATCTACTTGCTTCAGACAAGTCCAGAAGTTGTGAAAAGGTGGA ]
[+] EMBL AU095362 [ cTGTGTG ATTCATTGAAGATTGTGAGTTCACTTATATGTCTACTCAGATACTTCACTTTTTGGGAAATG AGGTCCAAAGACATCAGATCCTAGTAAATACATACGTTATATATATAACAGAGTGATACTTGAAAATGCTACTGTTCGAGCTAGTGCTGTAAGTACTTTGGCAAAGTTCGGTGCATTGGTTGACTCACTCAAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGATGATGAGGT ]
[+] EMBL AU065463 [ nCTACTGTTCGAGCTAGTGCTGTAAGTACTTTGGCAAAGTTCGGTGCATTGGTTGACTCACTCAAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGATGATGAGGTGCGTNACAGGGCCACGCTTTATCTCAAATTGCTTGGCGGGGAAGCTACAGTTGGTGAAACTGAGAAGGATGTGAATGAATTTCTCTTTGGTTCATTTGATATTCCACTAGTTAACCTGGAGACTAGCCTACAAAACTATGAACCATCAGAGGCACCTTTTTGATATTTCATCTGTATCTTTGGAAACTAAATCACAANCTCTTGCTGAGAAAAAGACTACGGGCAAAAAAGCCAACANGGCC ]
[+] EMBL AU162310 [ AGTTCGGTGCATTGGTTGACTCACTCAAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGATGATGAGGTGCGTGACAGGGCCACGCTTTATCTCAAATTGCTTGGCGGGGAAGCTACAGTTGGTGAAACTGAGAAGGATGTGAATGAATTTCTCTTTGGTTCATTTGATATTCCACTAGTTAACCTGGAGACTAGCCTACAAAACTATGAACCATCAGAGGCACC TTTTGATATTTCATCTGTATCTTTGGAAACTAAATCACAACCTCTTGCTGAGAAAAAGACTACGGGC AAAAAGCCAACA GGCCCAGCATCTGCTCTCAGCGGTCCAGTTCCTACTGTTGATGCCTCATATGAGAAGCTTCTTTCATCCATTCCTGAGTT ]
[+] EMBL C26876 [ CCAGCATCTGCTCTCAGCGGTCCAGTTCCTACTGTTGATGCCTCATATGAGAAGCTTCTTTCATCCATTCCTGAGTTTGCTGGTTTTGGAAAACTCTTTAAGTCATCAGCTCCTGTAGAATTGACCGAAGCTGAAACTGAATATTCAGTCAATGTTGTGAAGCACATTTATGACGGGCATGTTGTGCTCCAATACAATTGTACCAATACTATACCTGAACAGCTGCTTGAAGAGGTGGTGGTTTTTGTGGATGCTTCTGAGGCCGATGAATTTTCAGAAGTTGCAACGAAATCATTAAGATCCTTACCTTATGATTCACCAGGACAAACCTTTGTGGCTTTTTGAAAAGCTAGAAGGTGNCCTTGCTACTNGGGAGGTTCTCAAATATACTGAAATTTATTGGTAAAGAGGGTGATCCATCCACAGGTGAAGCTGATGATGATGGC ]
[+] EMBL AU030663 [ ATGATGGCGTTGAGGATGAGTACCAGCTTGAAGATCTGGAAATTACTTCTGCTGATTATATGTTGAAGGTTGGAGTTTCTAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCAGCCCTGCGAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGCTAGCAGTCAGATCAGATGATCCTGAGATCA GTGACAAGATCCATG AAATCGTTGCAAATGGCTAAATCTGATG AAGAGGGTCACCCCTTTTTTGACC TTTTTGTTTTTGGCTTTCACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTGGTTTTCCGTTGGATACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATATAACAATTTTTGATTGATTTGGAACCAaaaaaaaa ]
[+] EMBL BI118625 [ AAGATCCGGAAATTACTTCTGCTGATTATATGTTGAAGGTTGGAGTTTCCAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCCGTCATAGGCATCCTTGGCATGCAGCCCTGCGAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGNTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGCTAGCAGTCAGATCAGATGATCCTGAGATCAGGTGACAAGATCCATGAAAATCGTTGCAAATGGCTAAATCTGATGAAAGAGGGTCACCCCTTTTTTGACCTTTTTTGTTTTTGGCTTTCAC CCATGGAAAGCTCAACGGAATTTGATTAATTCTA ]
[+] EMBL BI118623 [ AAGATCTGGAAATTACTTGTGCTGATTATATGTTGAAGG TGGAGTTTCCAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCAAGCCTGCGAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGCGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGCCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATCAAGCTAGCAGTCAGATCAGATGATCC CAGATCA GTGACAAGATCCATG AAATCGTTGCAAATGGCTAAATCTGATG AAGAGGGTCACCCCTTTTTTGACC TTTTTGTTTTTGGCTTTCACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTA ]
[+] EMBL AU181548 [ TGGTGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGCTAGCAGTCAGATCAGATGATCCTGAGATCA GTGACAAGATCCATG AAATCGTTGCAAATGGCTAAATCTGATG AAGAGGGTCACCCCTTTTTTGACC TTTTTGTTTTTGGCTTTCACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTGGTTTTCCGTTGGANACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATATAACAATTTTTGATTGATTTGGAACCACATCATCAATTCCTTTATATATCAAGGATTTGACTAGTACATGCAATAATATATAGATGAAG ]
consensusID : consensus_13340#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 588 fasta sequence
[CGTGCCGAATTCGGCACGAGGTTGAAGGTTGGAGTTTCCAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAATATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCATCCCTGCTAGGGAACTGATGTGGTCCCAAGCAATTCTAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAATGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGNTAGCAGTCAGATCAGATGATCCTGAGATCAGTGACAAGATCCATGAAATCGTTGCAAATGGCTAAATCTGATGAAGAGGGTCACCCCTTTTTTGACCTTTTTGTTTTTGGCTTTCACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTGGTTTTCCGTTGGATACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATATAACAATTTTTGATTGATTTGGAACCACATCATCAAAAAAAAAAAAAAAAAA]
[+] EMBL BE230009 [CGTGCCGAATTCGGCACGAGGTTGAAGGTTGGAGTTTCCAACTTCAGAAATGCTTGGGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAATATGGGCTTGGCGCCAGGGAAAGCCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCATCCCTGCTAGGGAACTGATGTGGTCCCAAGCAATTCTAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAATGAGGCTGTCATTCGGACTTAGCGGACCGAA ]
[+] EMBL AU031418 [ AAGCCTGGCTGAGGCTGTGAGTGNTGTCATAGGCATCCTTGGCATGCANCCCTGCGAGGGAACTGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGGCAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCATGAAGNTAGCAGTCAGATCAGATGATCCTGAGATCAGTGACAAGATCCATGAAATCGTTGCAAATGGCTAAATCTGATGAAGAGGGTCACCCCTTTTTTGACCTTTTTGTTTTTGGCTTTCACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTGGTTTTCCGTTGGATACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATATAACAATTTTTGATTGATTTGGAACCACATCATCAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13340#0 CCCATTTGCCACCCAACCCTACTACCCCCTTCTTCTCTCTCCCCTCTCGTCCTCGTCCGC 60
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TTCCAGATTCAGATCCACCCATCGTCGTCGTCCATGCCGCTCGCCTCCTTTTCTCCACTG 120
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TCGTAAGCCCTCCTCCTCCTCCTCCTCCCACGCCGCCGCCGCCGGTGCCCCCACTCGCCG 180
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CCGTGCGCGCGTCCCGTAGTTCGCCCCACCAGCGGCCGCCATGGCGCAGCCGCTCGTCGT 240
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GAAGAAGGACGACGATCTCGACGAGGAAGAGTACTACTCGCCGTTCCTCGGGATCGAGAA 300
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GGGCGCCGTCCTGCAGGAGGCCCGCGTCTTCCACGACCCGCAGCTCGACGCGCGCCGTTG 360
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CTGCCAGGTCATCACCAAGCTCCTATACCTGCTCAACCAGGGTGACACCTTCACCAAGGT 420
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GGAGGCCACAGAGGTCTTTTTTGCGACGACCAAGTTGTTTCAATCCAAGGATGCAGGCCT 480
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TAGGAGAATGGTGTACCTCATGATCAAGGAACTCTCCCCATCAGCAGATGAGGTTATCAT 540
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CGTGACCAGCTCGTTGATGAAGGACATGAATAGCAAGACTGATATGTATCGAGCTAATGC 600
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 AATAAGAGTTCTTTGCCGCATCATTGACTCAACACTTCTAACCCAAATTGAAAGATATTT 660
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GAAGCAAGCCATTGTTGACAAGAACCCTGTTGTTGCAAGCGCGGCCCTTGTTAGTGGCAT 720
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CTACTTGCTTCAGACAAGTCCAGAAGTTGTGAAAAGGTGGAGCAATGAAGTTCAGGAGGC 780
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGTACAGTCGAGAGCTGCTCTTGTTCAATTTCATGCCCTTGCTCTTCTTCACCAGATTAG 840
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GCAAAATGACCGGTTGGCTGTCAGCAAGCTTGTCACTAGTCTAACTAGGGGTTCTGTTCG 900
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CTCACCTCTGGCACAGTGCCTACTTATTCGGTACACTAGCCAGGTGATTAGAGAGTCAAG 960
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CATGAATAGTCAAGGTGGAGATCGCCCTTTCTTTGATTTCCTGGAGTCATGTCTCCGGAA 1020
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TAAAGCAGAAATGGTCATACTTGAGGCTGCAAGAGCGATAACTGAATTAAATGGCGTCAC 1080
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CAGCCGGGAGCTTACACCTGCAATTACCGTGCTGCAATTGTTCTTAAGTTCATCGAAACC 1140
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGTTCTCAGATTTGCTGCTGTTCGAACACTTAATAAGGTTGCATCAACTCATCCTTTGGC 1200
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGTCACCAATTGTAACATAGATATGGAGAGTCTAATATCTGATCAGAACAGGAGCATTGC 1260
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TACCCTTGCAATTACAACACTACTTAAGACAGGCAATGAATCAAGTGTTGATCGCTTAAT 1320
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GAAGCAGATGACCAATTTTATGTCGGACATTGCCGATGAATTCAAGATTGTTGTCGTAGA 1380
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GGCCATAAGATCCTTGTGCTTGAAGTTCCCCCTAAAATATCGGTCACTGATGAACTTTTT 1440
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GAGTAATATCCTACGGGAAGAGGGTGGCTTTGAGTACAAGAAGGCTATTGTTGATTCAAT 1500
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TATCATACTCATTAGAGATATTCCTGATGCAAAAGAAAGTGGTTTATTTCACTTGTGTGA 1560
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 ATTCATTGAAGATTGTGAGTTCACTTATATGTCTACTCAGATACTTCACTTTTTGGGAAA 1620
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGAAGGTCCAAAGACATCAGATCCTAGTAAATACATACGTTATATATATAACAGAGTGAT 1680
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 ACTTGAAAATGCTACTGTTCGAGCTAGTGCTGTAAGTACTTTGGCAAAGTTCGGTGCATT 1740
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GGTTGACTCACTCAAGCCTCGAATTTTTGTCCTTCTGAGACGCTGCCTGTTTGATGGTGA 1800
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGATGAGGTGCGTGACAGGGCCACGCTTTATCTCAAATTGCTTGGCGGGGAAGCTACAGT 1860
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGGTGAAACTGAGAAGGATGTGAATGAATTTCTCTTTGGTTCATTTGATATTCCACTAGT 1920
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TAACCTGGAGACTAGCCTACAAAACTATGAACCATCAGAGGCACCTTTTGATATTTCATC 1980
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGTATCTTTGGAAACTAAATCACAACCTCTTGCTGAGAAAAAGACTACGGGCAAAAAGCC 2040
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 AACAGGCCCAGCATCTGCTCTCAGCGGTCCAGTTCCTACTGTTGATGCCTCATATGAGAA 2100
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GCTTCTTTCATCCATTCCTGAGTTTGCTGGTTTTGGAAAACTCTTTAAGTCATCAGCTCC 2160
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TGTAGAATTGACCGAAGCTGAAACTGAATATTCAGTCAATGTTGTGAAGCACATTTATGA 2220
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 CGGGCATGTTGTGCTCCAATACAATTGTACCAATACTATACCTGAACAGCTGCTTGAAGA 2280
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GGTGGTGGTTTTTGTGGATGCTTCTGAGGCCGATGAATTTTCAGAAGTTGCAACGAAATC 2340
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 ATTAAGATCCTTACCTTATGATTCACCAGGACAAACCTTTGTGGCTTTTGAAAAGCTAGA 2400
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 AGGTGTCCTTGCTACTGGGAAGTTCTCAAATATACTGAAATTTATTGTTAAAGAGGTTGA 2460
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 TCCATCCACAGGTGAAGCTGATGATGATGGCGTTGAGGATAAGTACCAGCTTGAAGATCT 2520
consensus_13340#1 ------------------------------------------------------------
consensus_13340#0 GGAAATTACTTCTGCTGATTATATGTTGAAGGTTGGAGTTTCTAACTTCAGAAATGCTTG 2580
consensus_13340#1 ----CGTGCCGAATTCGGCACGAGGTTGAAGGTTGGAGTTTCCAACTTCAGAAATGCTTG 56
* * * * ****************** *****************
consensus_13340#0 GGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAGTATGGGCTTGGCGCCAGGGAAAG 2640
consensus_13340#1 GGAAAGCATGGATCCAGAAAGCGAGCGGGTTGATGAATATGGGCTTGGCGCCAGGGAAAG 116
************************************ ***********************
consensus_13340#0 CCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCAGCCCTGCGAGGGAAC 2700
consensus_13340#1 CCTGGCTGAGGCTGTGAGTGCTGTCATAGGCATCCTTGGCATGCATCCCTGCTAGGGAAC 176
********************************************* ****** *******
consensus_13340#0 TGATGTGGTCCCAAGCAATTCGAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGG 2760
consensus_13340#1 TGATGTGGTCCCAAGCAATTCTAGGTCACACACTTGCCTGCTATCTGGTGTGTTTATCGG 236
********************* **************************************
consensus_13340#0 CAATGTGAAAGTTTTAGTGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCAT 2820
consensus_13340#1 CAATGTGAAAGTTTTAATGAGGCTGTCATTCGGACTTAGCGGACCGAAGGAAGTGGCCAT 296
**************** *******************************************
consensus_13340#0 GAAGCTAGCAGTCAGATCAGATGATCCTGAGATCAGTGACAAGATCCATGAAATCGTTGC 2880
consensus_13340#1 GAAGNTAGCAGTCAGATCAGATGATCCTGAGATCAGTGACAAGATCCATGAAATCGTTGC 356
**** *******************************************************
consensus_13340#0 AAATGGCTAAATCTGATGAAGAGGGTCACCCCTTTTTTGACCTTTTTGTTTTTGGCTTTC 2940
consensus_13340#1 AAATGGCTAAATCTGATGAAGAGGGTCACCCCTTTTTTGACCTTTTTGTTTTTGGCTTTC 416
************************************************************
consensus_13340#0 ACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTG 3000
consensus_13340#1 ACGCCATGGAAAGCTCAACGGAATTTGATTAATTCTATGATGATAGTACATGTAAGCTTG 476
************************************************************
consensus_13340#0 GTTTTCCGTTGGATACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATA 3060
consensus_13340#1 GTTTTCCGTTGGATACATGTGTTGTTGCACTCGCACCCCATCATTTGAAAACAAGGCATA 536
************************************************************
consensus_13340#0 TAACAATTTTTGATTGATTTGGAACCACATCATCAATTCCTTTATATATCAAGGATTTGA 3120
consensus_13340#1 TAACAATTTTTGATTGATTTGGAACCACATCATCAAAAAAAAAAAAAAAAAA-------- 588
************************************ * * * **
consensus_13340#0 CTAGTACATGCAATAATATATAGATGAAGTTATATCAATCAGATTGAGAGCTAC 3174
consensus_13340#1 ------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||