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Oryza sativa
cluster # 13341 cluster # 13341       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13341#0 length = 3371 sequences # 4  
consensus_13341#1 length = 972 sequences # 6  
consensus_13341#2 length = 795 sequences # 1  
consensus_13341#3 length = 409 sequences # 1  

consensusID : consensus_13341#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3371
fasta sequence
                              [CTCCGTTGCAGCGAACGAGATCTGCGACCGGTTCGCCACGGCGGGGTTCGGCGCGAACCTGATCACGTACCTGACGCAGCAGCTGCACCTGCCGCTGGTGGAGGCGTCCAACACGCTGACCAACTTCAACGGCACGTCCAGCCTCACCCCGATCCTGGGCGCGCTCGCCGCCGACGCCTTCGCCGGCCGCTTCTGGACCATCATCGCCGGATCCGTCTTCTACCAGCTCGGCATGCTCGCCCTCGTCGCGTCCGCGCTGCTCCCTTCGCTCCGCCCCGCGCCGTGCGCGCCGACGCACGGCGCTGCGTCGTGCCGCCGCGCCACCGGGTGGCAGCTCGCCGTGCTCTACCTCGCCCTGCTCTGCACGTCCCTCGGCTCCGGCGGCATCCGCCCCTGCGTGGTGGCGTTCGGCGCCGTCCAGTTCGACGGCCAGCAGCAGAAGCAGCGGCAGAAGGGTGGCGGTGGCGCGGCGGCGGCGGCGGCGGGGAGGAAGCGGAGCTACTTCAACCTCTACTTCTTCACGATGGGGCTCGCGGTGCTGCTCGCCCTGACGGTGGTGGTGTACATCCAGGAGAACGTGGGGTGGGGGTGGGGGTTCGGGATCCCGGCCATCGCCATGTTCGTCTCCATCGTGGTGTTCGTGGCAGGGTACCCGCTCTACGTCAGGCTGAAGCCTGGGGGCAGCCCGTTCACGCGGCTGGCGCAGGTGGTCGCCGCCGCGTTCCGGAAGCGCCGCGCTGCCGTGCCGGAGGACCCCGGCATGCTGTACCAGGACAAGGAGCTCGACGCGCTCATCTCCACCAATGGCAGGCTGCTCCACACAAACCAGCTCACGTTCTTTGACCGAGCTGCGATCGTGACGCCGGGTGACATCGCCGGCTCCGGCGAGCCGGACCTGTGGCGGCTGTCGGCGGTGCACCGCGTGGAGGAGCTCAAGTCCATCGTCCGGCTGCTGCCCATCTGGTCGGCCGGCATCCTGCTCGCCACCGCCGCGTCGCACAACGGCACCTTCACCATCCAGCAGGCGCGCACCATGGACCGCCACCTCACCCCTCGCTTGGAGATCCCGCCGGCGACCATGTCCATCTTCACGACGGTGGCGATGCTCGCCGGCCTCGCCCTCTACGACCGCGCCTTCGTGCCCCTGGCGCGCCGCGTCACGGGCCTCCCCTCCGGGATCACCTACTTCCAGCGCATGGCCATCGGGCTGGGCATCTCCATCCTCGGCGTCGCGTCGGCAGCGCTCGTCGAGGTGAGGCGCCGCGGCGCCGCCGCGGAC-C-ACGGCCTCCTCGACAGCCCCGCCGCCGTCGTGCCCATCAGCGTGTTCTGGCTGGTGCCGCAGTACGCCGTCCACGGCGTGGCGGAGGCGTTCTCGTCGGTGGCGCACATGGAGTTCCTGTACGACCAGGCGCCGGAGAGCATGCGCAGCAGCGCCGCCGCGCTCTTCTGGCTCTCCAGCTCCCTCGGCAACTACATGGGCACGGTGCTCGTCACGGCGGTGCAGCGCGCCACGCGCGGCGGCGGCGAGTGGCTCCAGGACAACATCAACCGGGGCAGGCTGGACTGCTACTACTGGCTCGTCACCACCCTCACGGTGCTCAACCTTGGATACTACCTCGTCTGCTTCCACTTCTACACCATGAAGCCATTAGAGGTGGCAGAGGAAGACGATGACGAGAAGGAGTGTGAGCTCTCCTCCGTCCACAAAAATGGCGGCCCCGGCGGGTTGGTGTGACGAGGTAGATTAGGATAATTTTATCAGGGTGGATAATGTTGTTAATTACGGAGTACGAAGTAATTAGCTGTGCATGTGCATGCCAAATACAATGGTTGCAAAATACAGCCTTTAGGGCATGTACAAAAATAGAGTCAGATATGAGTCTCTATATTATTTAGAGACTAGCATCTTACAACAGTTAGAGACAATATGGTTTCTAATCATTAATGTATCCAAATACTTTTTCTTACTCTTCTTTCCTTTTTTTCACTATCATGCAACAAAATTTGCTCTAATAAATGCTAAGAGTCGACTCTGAGCCGTTGTCATGCATAACAACCATACTCCTTTCTCTTTCTTCCATGTCATCAAATTACTTGCATGGCAATAGAGAGAGACCACTAATAAAAACCGTTGTACATGCACTTAGGATTAACTGAAAAAGGCCTAAGAGAGATTCTGGCAAGGTTCCACATTTTGTTACTCAGTTTTGCTAACTCACTAATAGAGAACCGATCTTTCGTAGATTAAAAACCGGTATTAAAGTTGCTTTACTACCGGTTCTAAAAGTCCAATTCCCTATAAACAACTTTAGTCTCGGTTGATGTTACTAACCGGTACTAAAAATGCCTCCAGAGTTAGGTCAAAAGGAAAACGTCTCTATTCAAGTCAGATGTGTAAATATAGTTGGTGAGATGGTTATACGCGTGAGAGATAAGGTGAGAGATCTTGAGTTTGAATCCTACATCCCACATATTTTTTTTCTCTTGCTATATGCATTTTTAGTTTTAACCGGTACTAAAGATCGACATCTTAATCCCAATTTGCTCATCTCGGTTGCTACCACCGGTAGTAAATGTGGTTGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTATAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTATGTATGGCAAGCTAGGTTTCTTCTTGAGTATATAGTATGATCCCTCTGATCGTTGTGACAGAGCTCAGCTGGGTGTAAATCGGAGCGCCTTGTGATCGACCCTCTGGAGGTGCGCTTCCCATTTGAGAAGGACAGGGATGTATCCTGCGTGCTGCAGCTGACGAACAGGTCCGCCGATCGCGTGGCGTTCGCCGTGCAGGTGGACGAGTCCAAGTACCGCGCGGTGCCGGACAGGGGCGTCGTGCAGCCGCGGTCCAGGCGGTACATCGTCGCGACGTCGCGAGCGCAGGCGAGCGCGCCGACCAACTTGCAGCGCGACGACTCGTTCCTCCTGCGGAGCAAGAGGGTGGAGGGCAGCGCCGACGACGACTTTGCGGAAGACTTCGAAAAGCTGATGGGCAAGGCGGTGGATGGGGAGACGATGAGGCTGCCGGTTGTCTATATCGCACTGCCTCTACCTCCTAGCAGTTAAGCGA-TTATACGCAGCTGTCTGTCCTCATGTATCAGAGATCCGCTAGCTAGTCCGAATAATGTCCGATCCGTCGACATTTGCGTCTTAACAGCCTCGTGATTTATATATATGACTTTTGTGAAACTAGGAAGATAGCCCACGCATATGTGCGGGCATTTGTTTAATGTGTTTATGTGCAGTTGGTTTTTTTATTGAAATATCATTTATACTCTATTCAAA]

[+] EMBL AK110441             [CTCCGTTGCAGCGAACGAGATCTGCGACCGGTTCGCCACGGCGGGGTTCGGCGCGAACCTGATCACGTACCTGACGCAGCAGCTGCACCTGCCGCTGGTGGAGGCGTCCAACACGCTGACCAACTTCAACGGCACGTCCAGCCTCACCCCGATCCTGGGCGCGCTCGCCGCCGACGCCTTCGCCGGCCGCTTCTGGACCATCATCGCCGGATCCGTCTTCTACCAGCTCGGCATGCTCGCCCTCGTCGCGTCCGCGCTGCTCCCTTCGCTCCGCCCCGCGCCGTGCGCGCCGACGCACGGCGCTGCGTCGTGCCGCCGCGCCACCGGGTGGCAGCTCGCCGTGCTCTACCTCGCCCTGCTCTGCACGTCCCTCGGCTCCGGCGGCATCCGCCCCTGCGTGGTGGCGTTCGGCGCCGTCCAGTTCGACGGCCAGCAGCAGAAGCAGCGGCAGAAGGGTGGCGGTGGCGCGGCGGCGGCGGCGGCGGGGAGGAAGCGGAGCTACTTCAACCTCTACTTCTTCACGATGGGGCTCGCGGTGCTGCTCGCCCTGACGGTGGTGGTGTACATCCAGGAGAACGTGGGGTGGGGGTGGGGGTTCGGGATCCCGGCCATCGCCATGTTCGTCTCCATCGTGGTGTTCGTGGCAGGGTACCCGCTCTACGTCAGGCTGAAGCCTGGGGGCAGCCCGTTCACGCGGCTGGCGCAGGTGGTCGCCGCCGCGTTCCGGAAGCGCCGCGCTGCCGTGCCGGAGGACCCCGGCATGCTGTACCAGGACAAGGAGCTCGACGCGCTCATCTCCACCAATGGCAGGCTGCTCCACACAAACCAGCTCACGTTCTTTGACCGAGCTGCGATCGTGACGCCGGGTGACATCGCCGGCTCCGGCGAGCCGGACCTGTGGCGGCTGTCGGCGGTGCACCGCGTGGAGGAGCTCAAGTCCATCGTCCGGCTGCTGCCCATCTGGTCGGCCGGCATCCTGCTCGCCACCGCCGCGTCGCACAACGGCACCTTCACCATCCAGCAGGCGCGCACCATGGACCGCCACCTCACCCCTCGCTTGGAGATCCCGCCGGCGACCATGTCCATCTTCACGACGGTGGCGATGCTCGCCGGCCTCGCCCTCTACGACCGCGCCTTCGTGCCCCTGGCGCGCCGCGTCACGGGCCTCCCCTCCGGGATCACCTACTTCCAGCGCATGGCCATCGGGCTGGGCATCTCCATCCTCGGCGTCGCGTCGGCAGCGCTCGTCGAGGTGAGGCGCCGCGGCGCCGCCGCGGAC C ACGGCCTCCTCGACAGCCCCGCCGCCGTCGTGCCCATCAGCGTGTTCTGGCTGGTGCCGCAGTACGCCGTCCACGGCGTGGCGGAGGCGTTCTCGTCGGTGGCGCACATGGAGTTCCTGTACGACCAGGCGCCGGAGAGCATGCGCAGCAGCGCCGCCGCGCTCTTCTGGCTCTCCAGCTCCCTCGGCAACTACATGGGCACGGTGCTCGTCACGGCGGTGCAGCGCGCCACGCGCGGCGGCGGCGAGTGGCTCCAGGACAACATCAACCGGGGCAGGCTGGACTGCTACTACTGGCTCGTCACCACCCTCACGGTGCTCAACCTTGGATACTACCTCGTCTGCTTCCACTTCTACACCATGAAGCCATTAGAGGTGGCAGAGGAAGACGATGACGAGAAGGAGTGTGAGCTCTCCTCCGTCCACAAAAATGGCGGCCCCGGCGGGTTGGTGTGACGAGGTAGATTAGGATAATTTTATCAGGGTGGATAATGTTGTTAATTACGGAGTACGAAGTAATTAGCTGTGCATGTGCATGCCAAATACAATGGTTGCAAAATACAGCCTTTAGGGCATGTACAAAAATAGAGTCAGATATGAGTCTCTATATTATTTAGAGACTAGCATCTTACAACAGTTAGAGACAATATGGTTTCTAATCATTAATGTATCCAAATACTTTTTCTTACTCTTCTTTCCTTTTTTTCACTATCATGCAACAAAATTTGCTCTAATAAATGCTAAGAGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C72709               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGCATCCTGCTCGCCACCGCCGCGTCGCACAACGGCACCTTCACCATCCAGCAGGCNCGCACCATGGACCGCCACCTCACCCCTCGCTTGGAGATCCCGCCGGCGACCATGTCCATCTTCACGACGGTGGCGATGCTCGCCGGCCTCGCCCTCTACGACCGCGCCTTCGTGCCCCTGGCGCGCCGCGTCACGGGCCTCCCCTCCGGGATCACCTACTTCCAGCGCATGGCCATCGGGCTGGGNATCTCCATCCTCGGCGTCGCGTCGGCAGCGCTCGTCGAGGTGAGGCGCCGCGGCG CGCAGGGAACTCAACGGCCTCCTCGACAGCACCGACGNCGTCGTGCCCATAAGCGTGTTCTGGCTGGTGCCGAAGTAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK119916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCAAATACTTTTT TTTCTCTTCTTTCCTTTCTTTCACTATCATGCAACAAAATTTACTCTAATAAATGCTAAGAGTCGACTCTGAGCCGTTGTCATGCATAACAACCATACTCCTTTCTCTTTCTTCCATGTCATCAAATTACTTGCATGGCAATAGAGAGAGACCACTAATAAAAACCGTTGTACATGCACTTAGGATTAACTGAAAAAGGCCTAAGAGAGATTCTGGCAAGGTTCCACATTTTGTTACTCAGTTTTGCTAACTCACTAATAGAGAACCGATCTTTCGTAGATTAAAAACCGGTATTAAAGTTGCTTTACTACCGGTTCTAAAAGTCCAATTCCCTATAAACAACTTTAGTCTCGGTTGATGTTACTAACCGGTACTAAAAATGCCTCCAGAGTTAGGTCAAAAGGAAAACGTCTCTATTCAAGTCAGATGTGTAAATATAGTTGGTGAGATGGTTATACGCGTGAGAGATAAGGTGAGAGATCTTGAGTTTGAATCCTACATCCCACATATTTTTTTTCTCTTGCTATATGCATTTTTAGTTTTAACCGGTACTAAAGATCGACATCTTAATCCCAATTTGCTCATCTCGGTTGCTACCACCGGTAGTAAATGTGGTTGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTATAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTATGTATGGCAAGCTAGGTTTCTTCTTGAGTATATAGTATGATCCCTCTGATCGTTGTGACAGAGCTCAGCTGGGTGTAAATCGGAGCGCCTTGTGATCGACCCTCTGGAGGTGCGCTTCCCATTTGAGAAGGACAGGGATGTATCCTGCGTGCTGCAGCTGACGAACAGGTCCGCCGATCGCGTGGCGTTCGCCGTGCAGGTGGACGAGTCCAAGTACCGCGCGGTGCCGGACAGGGGCGTCGTGCAGCCGCGGTCCAGGCGGTACATCGTCGCGACGTCGCGAGCGCAGGCGAGCGCGCCGACCAACTTGCAGCGCGACGACTCGTTCCTCCTGCGGAGCAAGAGGGTGGAGGGCAGCGCCGACGACGACTTTGCGGAAGACTTCGAAAAGCTGATGGGCAAGGCGGTGGATGGGGAGACGATGAGGCTGCCGGTTGTCTATATCGCACTGCCTCTACCTCCTAGCAGTTAAGCGA TTATACGCAGCTGTCTGTCCTCATGTATCAGAGATCCGCTAGCTAGTCCGAATAATGTCCGATCCGTCGACATTTGCGTCTTAACAGCCTCGTGATTTATATATATGACTTTTGTGAAACTAGGAAGATAGCCCACGCATATGTGCGGGCATTTGTTTAATGTGTTTATGTGCAGTTGGT                                   ]
[-] EMBL CB676105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGTTGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTATAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTATGTATGGCAAGCTAGGTTTCTTCTTGAGTATATAGTATGATCCCTCTGATCGTTGTGACAGAGCTCAGCTGGGTGTAAATCGGAGCGCCTTGTGATCGACCCTCTGGAGGTGCGCTTCCCATTTGAGAAGGACAGGGATGTATCCTGCGTGCTGCAGCTGACGAACAGGTCCGCCGATCGCGTGGCGTTCGCCGTGCAGGTGGACGAGTCCAAGTACCGCGCGGTGCCGGACAGGGGCGTCGTGCAGCCGCGGTCCAGGCGGTACATCGTCGCGACGTCGCGAGCGCAGGCGAGCGCGCCGACCAACTTGCAGCGCGACGACTCGTTCCTCCTGCGGAGCAAGAGGGTGGAGGGCAGCGCCGACGACGACTTTGCGGAAGACTTCGAAAAGCTGATGGGCAAGGCGGTGGATGGGGAGACGATGAGGCTGCCGGTTGTCTATATCGCACTGCCTCTACCTCCTAGCAGTTAAGCGATTTATACGCAGCTGTCTGTCCTCATGTATCAGAGATCCGCTAGCTAGTCCGAATAATGTCCGATCCGTCGACATTTGCGTCTTAACAGCCTCGTGATTTATATATATGACTTTTGTGAAACTAGGAAGATAGCCCACGCATATGTGCGGGCATTTGTTTAATGTGTTTATGTGCAGTTGGTTTTTTTATTGAAATATCATTTATACTCTATTCAAA]


>consensus_13341#0 CTCCGTTGCAGCGAACGAGATCTGCGACCGGTTCGCCACGGCGGGGTTCGGCGCGAACCT GATCACGTACCTGACGCAGCAGCTGCACCTGCCGCTGGTGGAGGCGTCCAACACGCTGAC CAACTTCAACGGCACGTCCAGCCTCACCCCGATCCTGGGCGCGCTCGCCGCCGACGCCTT CGCCGGCCGCTTCTGGACCATCATCGCCGGATCCGTCTTCTACCAGCTCGGCATGCTCGC CCTCGTCGCGTCCGCGCTGCTCCCTTCGCTCCGCCCCGCGCCGTGCGCGCCGACGCACGG CGCTGCGTCGTGCCGCCGCGCCACCGGGTGGCAGCTCGCCGTGCTCTACCTCGCCCTGCT CTGCACGTCCCTCGGCTCCGGCGGCATCCGCCCCTGCGTGGTGGCGTTCGGCGCCGTCCA GTTCGACGGCCAGCAGCAGAAGCAGCGGCAGAAGGGTGGCGGTGGCGCGGCGGCGGCGGC GGCGGGGAGGAAGCGGAGCTACTTCAACCTCTACTTCTTCACGATGGGGCTCGCGGTGCT GCTCGCCCTGACGGTGGTGGTGTACATCCAGGAGAACGTGGGGTGGGGGTGGGGGTTCGG GATCCCGGCCATCGCCATGTTCGTCTCCATCGTGGTGTTCGTGGCAGGGTACCCGCTCTA CGTCAGGCTGAAGCCTGGGGGCAGCCCGTTCACGCGGCTGGCGCAGGTGGTCGCCGCCGC GTTCCGGAAGCGCCGCGCTGCCGTGCCGGAGGACCCCGGCATGCTGTACCAGGACAAGGA GCTCGACGCGCTCATCTCCACCAATGGCAGGCTGCTCCACACAAACCAGCTCACGTTCTT TGACCGAGCTGCGATCGTGACGCCGGGTGACATCGCCGGCTCCGGCGAGCCGGACCTGTG GCGGCTGTCGGCGGTGCACCGCGTGGAGGAGCTCAAGTCCATCGTCCGGCTGCTGCCCAT CTGGTCGGCCGGCATCCTGCTCGCCACCGCCGCGTCGCACAACGGCACCTTCACCATCCA GCAGGCGCGCACCATGGACCGCCACCTCACCCCTCGCTTGGAGATCCCGCCGGCGACCAT GTCCATCTTCACGACGGTGGCGATGCTCGCCGGCCTCGCCCTCTACGACCGCGCCTTCGT GCCCCTGGCGCGCCGCGTCACGGGCCTCCCCTCCGGGATCACCTACTTCCAGCGCATGGC CATCGGGCTGGGCATCTCCATCCTCGGCGTCGCGTCGGCAGCGCTCGTCGAGGTGAGGCG CCGCGGCGCCGCCGCGGACCACGGCCTCCTCGACAGCCCCGCCGCCGTCGTGCCCATCAG CGTGTTCTGGCTGGTGCCGCAGTACGCCGTCCACGGCGTGGCGGAGGCGTTCTCGTCGGT GGCGCACATGGAGTTCCTGTACGACCAGGCGCCGGAGAGCATGCGCAGCAGCGCCGCCGC GCTCTTCTGGCTCTCCAGCTCCCTCGGCAACTACATGGGCACGGTGCTCGTCACGGCGGT GCAGCGCGCCACGCGCGGCGGCGGCGAGTGGCTCCAGGACAACATCAACCGGGGCAGGCT GGACTGCTACTACTGGCTCGTCACCACCCTCACGGTGCTCAACCTTGGATACTACCTCGT CTGCTTCCACTTCTACACCATGAAGCCATTAGAGGTGGCAGAGGAAGACGATGACGAGAA GGAGTGTGAGCTCTCCTCCGTCCACAAAAATGGCGGCCCCGGCGGGTTGGTGTGACGAGG TAGATTAGGATAATTTTATCAGGGTGGATAATGTTGTTAATTACGGAGTACGAAGTAATT AGCTGTGCATGTGCATGCCAAATACAATGGTTGCAAAATACAGCCTTTAGGGCATGTACA AAAATAGAGTCAGATATGAGTCTCTATATTATTTAGAGACTAGCATCTTACAACAGTTAG AGACAATATGGTTTCTAATCATTAATGTATCCAAATACTTTTTCTTACTCTTCTTTCCTT TTTTTCACTATCATGCAACAAAATTTGCTCTAATAAATGCTAAGAGTCGACTCTGAGCCG TTGTCATGCATAACAACCATACTCCTTTCTCTTTCTTCCATGTCATCAAATTACTTGCAT GGCAATAGAGAGAGACCACTAATAAAAACCGTTGTACATGCACTTAGGATTAACTGAAAA AGGCCTAAGAGAGATTCTGGCAAGGTTCCACATTTTGTTACTCAGTTTTGCTAACTCACT AATAGAGAACCGATCTTTCGTAGATTAAAAACCGGTATTAAAGTTGCTTTACTACCGGTT CTAAAAGTCCAATTCCCTATAAACAACTTTAGTCTCGGTTGATGTTACTAACCGGTACTA AAAATGCCTCCAGAGTTAGGTCAAAAGGAAAACGTCTCTATTCAAGTCAGATGTGTAAAT ATAGTTGGTGAGATGGTTATACGCGTGAGAGATAAGGTGAGAGATCTTGAGTTTGAATCC TACATCCCACATATTTTTTTTCTCTTGCTATATGCATTTTTAGTTTTAACCGGTACTAAA GATCGACATCTTAATCCCAATTTGCTCATCTCGGTTGCTACCACCGGTAGTAAATGTGGT TGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTATAAACTACGAAGTGACAAG TGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTATGTATGGCAAGCTAGGTTTC TTCTTGAGTATATAGTATGATCCCTCTGATCGTTGTGACAGAGCTCAGCTGGGTGTAAAT CGGAGCGCCTTGTGATCGACCCTCTGGAGGTGCGCTTCCCATTTGAGAAGGACAGGGATG TATCCTGCGTGCTGCAGCTGACGAACAGGTCCGCCGATCGCGTGGCGTTCGCCGTGCAGG TGGACGAGTCCAAGTACCGCGCGGTGCCGGACAGGGGCGTCGTGCAGCCGCGGTCCAGGC GGTACATCGTCGCGACGTCGCGAGCGCAGGCGAGCGCGCCGACCAACTTGCAGCGCGACG ACTCGTTCCTCCTGCGGAGCAAGAGGGTGGAGGGCAGCGCCGACGACGACTTTGCGGAAG ACTTCGAAAAGCTGATGGGCAAGGCGGTGGATGGGGAGACGATGAGGCTGCCGGTTGTCT ATATCGCACTGCCTCTACCTCCTAGCAGTTAAGCGATTATACGCAGCTGTCTGTCCTCAT GTATCAGAGATCCGCTAGCTAGTCCGAATAATGTCCGATCCGTCGACATTTGCGTCTTAA CAGCCTCGTGATTTATATATATGACTTTTGTGAAACTAGGAAGATAGCCCACGCATATGT GCGGGCATTTGTTTAATGTGTTTATGTGCAGTTGGTTTTTTTATTGAAATATCATTTATA CTCTATTCAAA



consensusID : consensus_13341#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 972
fasta sequence
                              [AACAAACACTCAAGACAATTAACACGACAAATCATGGAGAGATCAGCCACCGTCTTTGTAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACGCCTGCGACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGAGCGTGGGCCCGGCCATGTCGCGGACGTGCGCCGAGACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGACGGACTTCATGGTGGCC-GCCGCGAACGCCGCGACGGAGTCGTACAAGGCTGGCAAGGAGGCCGTCGGCAAGGTGCTCTCCAACCCGCTGGCGCCCGACGGCGAGCGGCTGCCGTGCCTCGTGTGCGCGAACAAGTACGACGACGCGTCGATGCTCGTCGCCAGCACCGCCGACGACGCCAAGCGCTGCAAGCTGAGCGCCGACAGCCTCCCCGACCTCGTCACCGCCGTCTCTGCCGTCGACGAGTGCGCCACGAAGATGTTCGAGGAGAGCGGGAACACGACGTCGGTGTACGCCACGGCCATCACCAATCGGGATTGGACCGTGCTCGTTCTGCGCCTCGCTACGTTGGTTGTGCCGCGCCAGCAACTCAGCTAGTTCTGCCATGCATCACCAATCGTGCGATTGGATTGCTGGTCGCCCTCCCTTGTCCTTCCTCGTTCTAAGGCCGTGTTTTGTTTCCCTCATATTCCCAACTTTCCATCACATCAAAAGCTTTCCTACACTCATAAACTTTCAACTTTTTTTCCAAACTCCCATTTCTTTAAACTTTCAACTTTTTTTAGGAACTAAACACACCCTAAATATGGCTGATATCAAGCATTAAAAACTTTAGCTATGAATAAATTTTAAAATACTTACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTGTACTAGAAAAGATGCCCGTGTGTTG]

[+] EMBL AK072310             [AACAAACACTCAAGACAATTAACACGACAAATCATGGAGAGATCAGCCACCGTCTTTGTAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACGCCTGCGACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGAGCGTGGGCCCGGCCATGTCGCGGACGTGCGCCGAGACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGACGGACTTCATGGTGGCC GCCGCGAACGCCGCGACGGAGTCGTACAAGGCTGGCAAGGAGGCCGTCGGCAAGGTGCTCTCCAACCCGCTGGCGCCCGACGGCGAGCGGCTGCCGTGCCTCGTGTGCGCGAACAAGTACGACGACGCGTCGATGCTCGTCGCCAGCACCGCCGACGACGCCAAGCGCTGCAAGCTGAGCGCCGACAGCCTCCCCGACCTCGTCACCGCCGTCTCTGCCGTCGACGAGTGCGCCACGAAGATGTTCGAGGAGAGCGGGAACACGACGTCGGTGTACGCCACGGCCATCACCAATCGGGATTGGACCGTGCTCGTTCTGCGCCTCGCTACGTTGGTTGTGCCGCGCCAGCAACTCAGCTAGTTCTGCCATGCATCACCAATCGTGCGATTGGATTGCTGGTCGCCCTCCCTTGTCCTTCCTCGTTCTAAGGCCGTGTTTTGTTTCCCTCATATTCCCAACTTTCCATCACATCAAAAGCTTTCCTACACTCATAAACTTTCAACTTTTTTTCCAAACTCCCATTTCTTTAAACTTTCAACTTTTTTTAGGAACTAAACACACCCTAAATATGGCTGATATCAAGCATTAAAAACTTTAGCTATGAATAAATTTTAAAATACTTACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTGTACTAGAAAAGATGCCCGTGTGTTG]
[+] EMBL AK071817             [AACAAACACTCAAGACAATTAACACGACAAATCATGGAGAGATCAGCCACCGTCTTTGTAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACGCCTGCGACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGAGCGTGGGCCCGGCCATGTCGCGGACGTGCGCCGAGACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGACGGACTTCATGGTGGCC GCCGCGAACGCCGCGACGGAGTCGTACAAGGCTGGCAAGGAGGCCGTCGGCAAGGTGCTCTCCAACCCGCTGGCGCCCGACGGCGAGCGGCTGCCGTGCCTCGTGTGCGCGAACAAGTACGACGACGCGTCGATGCTCGTCGCCAGCACCGCCGACGACGCCAAGCGCTGCAAGCTGAGCGCCGACAGCCTCCCCGACCTCGTCACCGCCGTCTCTGCCGTCGACGAGTGCGCCACGAAGATGTTCGAGGAGAGCGGGAACACGACGTCGGTGTACGCCACGGCCATCACCAATCGGGATTGGACCGTGCTCGTTCTGCGCCTCGCTACGTTGGTTGTGCCGCGCCAGCAACTCAGCTAGTTCTGCCATGCATCACCAATCGTGCGATTGGATTGCTGGTCGCCCTCCCTTGTCCTTCCTCGTTCTAAGGCCGTGTTTTGTTTCCCTCATATTCCCAACTTTCCATCACATCAAAAGCTTTCCTACACTCATAAACTTTCAACTTTTTTTCCAAACTCCCATTTCTTTAAACTTTCAACTTTTTTTAGGAACTAAACACACCCTAAATATGGCTGATATCAAGCATTAAAAACTTTAGCTATGAATAAATTTTAAAATACTTACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGTT                                                ]
[+] EMBL AU078653             [                 ATTAACACGACAAATCATGGAGAGATCAGCCACCGTCTTTGTAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACGCCTGCGACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGAGCGTGGGCCCGGCCATGTCGCGGACGTGCGCCGAGACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGACGGACTTCATGGTGGCCGGCCGCGAACNCCGCGACGGA TNTAACAAGGCTGGCAAGGAGGCCGTCGGCAAGGTGCTCTCCAACCCGCTGGCGCCCGANGGCGAGCGGCTGCCGTNCCTCGTGTGCGCGAACAAGTACGACGACGCGTCGATNCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU078649             [                                  TGGAGAGATCAGCCACCGTCTTTGTAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACGCCTGCNACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGANCGTGGGCCCGGCCATNTCGCGGACGTGCGCCGANACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGACGGACTTCATGGTGGCC GCCGCGAACNCCGCGACGGAGTNTAACAAGGCTGGCAAGGAGNCCGTCGGCAAGGTGCTCTCCAACCCGCTGGCGCCCGACGGCGAGCGGCTGCCGTGCCTCGTGTGCGCGAACAAGTACGACGACGCGTCGATGCTCATCa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA766038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCGNGTTTTGTTTCCCTCCTATTCCCAACTTTACATCACATCAAAAACTTTCCTACACTCATAAACTTTCAACTTTTTTTCCAAACTCCCATTTCTTTAAACTTCTAATTTTTTTCAGGAACTAAACACACCCTAAATATGGCTGATATCAAGCTTTAAAAACTTTAGCTATGAATAAATTTTAAAATACTTACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTATACTAGAAAAGATGCCTGTGTGTTG]
[+] EMBL AU078654             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTAAACTTTCAACTTTTTTTGGGAACTAAACACNCCCTAAATATGGCTGATATCAAGCATTAAAAACTTTAGCTATGAATAAATTTTAAAATACTTACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTGTACTAGAAAAGATGCCCGTGTGTTG]


>consensus_13341#1 AACAAACACTCAAGACAATTAACACGACAAATCATGGAGAGATCAGCCACCGTCTTTGTA GCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACGCCTGCGAC GGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGAGCGTGGGCCCGGCCATG TCGCGGACGTGCGCCGAGACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGACGGACTTC ATGGTGGCCGCCGCGAACGCCGCGACGGAGTCGTACAAGGCTGGCAAGGAGGCCGTCGGC AAGGTGCTCTCCAACCCGCTGGCGCCCGACGGCGAGCGGCTGCCGTGCCTCGTGTGCGCG AACAAGTACGACGACGCGTCGATGCTCGTCGCCAGCACCGCCGACGACGCCAAGCGCTGC AAGCTGAGCGCCGACAGCCTCCCCGACCTCGTCACCGCCGTCTCTGCCGTCGACGAGTGC GCCACGAAGATGTTCGAGGAGAGCGGGAACACGACGTCGGTGTACGCCACGGCCATCACC AATCGGGATTGGACCGTGCTCGTTCTGCGCCTCGCTACGTTGGTTGTGCCGCGCCAGCAA CTCAGCTAGTTCTGCCATGCATCACCAATCGTGCGATTGGATTGCTGGTCGCCCTCCCTT GTCCTTCCTCGTTCTAAGGCCGTGTTTTGTTTCCCTCATATTCCCAACTTTCCATCACAT CAAAAGCTTTCCTACACTCATAAACTTTCAACTTTTTTTCCAAACTCCCATTTCTTTAAA CTTTCAACTTTTTTTAGGAACTAAACACACCCTAAATATGGCTGATATCAAGCATTAAAA ACTTTAGCTATGAATAAATTTTAAAATACTTACGTTAGAAACGTTGAGACCATATGTATA GACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTGTACTAGAAAAGAT GCCCGTGTGTTG



consensusID : consensus_13341#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 795
fasta sequence
                              [CTCCCTCATTAGGGCATGTACAACAGTTAGAGATAATATGGTTTTTAATCATTAATGTATCCAAATACTTTTTTTTTCTCTTCTTTCCTTTCTTTCACTATCATGCAACAAAATTTACTCTAATAAATGCTAAGAGTCGACTCTGAGCCGTTGTCATGCATAACAACCATACTCCTTTCTCTTTCTTCCATGTCATCAAATTACTTGCATGGCAATAGAGAGAGACCACTAATAAAAACCGTTGTACATGCACTTAGGATTAACTGAAAAAGGCCTAAGAGAGATTCTGGCAAGGTTCCACATTTTGTTACTCAGTTTTGCTAACTCACTAATAGAGAACCGATCTTTCGTAGATTAAAAACCGGTATTAAAGTTGCTTTACTACCGGTTCTAAAAGTCCAATTCCCTATAAACAACTTTAGTCTCGGTTGATGTTACTAACCGGTACTAAAAATGCCTCCAGAGTTAGGTCAAAAGGAAAACGTCTCTATTCAAGTCAGATGTGTAAATATAGTTGGTGAGATGGTTATACGCGTGAGAGATAAGGTGAGAGATCTTGAGTTTGAATCCTACATCCCACATATTTTTTTTCTCTTGCTATATGCATTTTTAGTTTTAACCGGTACTAAAGATCGACATCTTTAATCCCAATTTGCTCATCTCGGTTGCTACCACCGGTAGTAAATGTGGTTGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTATAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTATGTA]

[+] EMBL CB676104             [CTCCCTCATTAGGGCATGTACAACAGTTAGAGATAATATGGTTTTTAATCATTAATGTATCCAAATACTTTTTTTTTCTCTTCTTTCCTTTCTTTCACTATCATGCAACAAAATTTACTCTAATAAATGCTAAGAGTCGACTCTGAGCCGTTGTCATGCATAACAACCATACTCCTTTCTCTTTCTTCCATGTCATCAAATTACTTGCATGGCAATAGAGAGAGACCACTAATAAAAACCGTTGTACATGCACTTAGGATTAACTGAAAAAGGCCTAAGAGAGATTCTGGCAAGGTTCCACATTTTGTTACTCAGTTTTGCTAACTCACTAATAGAGAACCGATCTTTCGTAGATTAAAAACCGGTATTAAAGTTGCTTTACTACCGGTTCTAAAAGTCCAATTCCCTATAAACAACTTTAGTCTCGGTTGATGTTACTAACCGGTACTAAAAATGCCTCCAGAGTTAGGTCAAAAGGAAAACGTCTCTATTCAAGTCAGATGTGTAAATATAGTTGGTGAGATGGTTATACGCGTGAGAGATAAGGTGAGAGATCTTGAGTTTGAATCCTACATCCCACATATTTTTTTTCTCTTGCTATATGCATTTTTAGTTTTAACCGGTACTAAAGATCGACATCTTTAATCCCAATTTGCTCATCTCGGTTGCTACCACCGGTAGTAAATGTGGTTGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTATAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTATGTA]


>consensus_13341#2 CTCCCTCATTAGGGCATGTACAACAGTTAGAGATAATATGGTTTTTAATCATTAATGTAT CCAAATACTTTTTTTTTCTCTTCTTTCCTTTCTTTCACTATCATGCAACAAAATTTACTC TAATAAATGCTAAGAGTCGACTCTGAGCCGTTGTCATGCATAACAACCATACTCCTTTCT CTTTCTTCCATGTCATCAAATTACTTGCATGGCAATAGAGAGAGACCACTAATAAAAACC GTTGTACATGCACTTAGGATTAACTGAAAAAGGCCTAAGAGAGATTCTGGCAAGGTTCCA CATTTTGTTACTCAGTTTTGCTAACTCACTAATAGAGAACCGATCTTTCGTAGATTAAAA ACCGGTATTAAAGTTGCTTTACTACCGGTTCTAAAAGTCCAATTCCCTATAAACAACTTT AGTCTCGGTTGATGTTACTAACCGGTACTAAAAATGCCTCCAGAGTTAGGTCAAAAGGAA AACGTCTCTATTCAAGTCAGATGTGTAAATATAGTTGGTGAGATGGTTATACGCGTGAGA GATAAGGTGAGAGATCTTGAGTTTGAATCCTACATCCCACATATTTTTTTTCTCTTGCTA TATGCATTTTTAGTTTTAACCGGTACTAAAGATCGACATCTTTAATCCCAATTTGCTCAT CTCGGTTGCTACCACCGGTAGTAAATGTGGTTGTAAACCGGGAAAAAAAACGTTTCCCCT GTAGCGACTGTATAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACAC AGGGACTAGTATGTA



consensusID : consensus_13341#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 409
fasta sequence
                              [CAGNTCCCTCGGCAACTACATGGGCACGGTGCTCGTCACGGCGGTGCAAGCCGCCACGCGCGGCGGCGGCGAGTGGCTCCAGGACAACATCAACCGGGGCAGGCTGGACTGCTACTACTGGCTCGTCACCACCCTCATGGTGCTCAACCTTGGATACTACCTCGTCTGCTTCCACTTCTACACCATGAAGCCATTAGAGGTGGCAGAGGAAGACGATGACGAGAAGGAGTGTGAGCTCTCCTCCGTCCACAAAAATGGCGNCCCCGGCGGGTTGGTGTGACGAGGTTGANTAGNTTTTTAAATACTTGACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTGTACTAGAAAAGATGCCCGTGTGTTG]

[+] EMBL AU078650             [CAGNTCCCTCGGCAACTACATGGGCACGGTGCTCGTCACGGCGGTGCAAGCCGCCACGCGCGGCGGCGGCGAGTGGCTCCAGGACAACATCAACCGGGGCAGGCTGGACTGCTACTACTGGCTCGTCACCACCCTCATGGTGCTCAACCTTGGATACTACCTCGTCTGCTTCCACTTCTACACCATGAAGCCATTAGAGGTGGCAGAGGAAGACGATGACGAGAAGGAGTGTGAGCTCTCCTCCGTCCACAAAAATGGCGNCCCCGGCGGGTTGGTGTGACGAGGTTGANTAGNTTTTTAAATACTTGACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTGTACTAGAAAAGATGCCCGTGTGTTG]


>consensus_13341#3 CAGNTCCCTCGGCAACTACATGGGCACGGTGCTCGTCACGGCGGTGCAAGCCGCCACGCG CGGCGGCGGCGAGTGGCTCCAGGACAACATCAACCGGGGCAGGCTGGACTGCTACTACTG GCTCGTCACCACCCTCATGGTGCTCAACCTTGGATACTACCTCGTCTGCTTCCACTTCTA CACCATGAAGCCATTAGAGGTGGCAGAGGAAGACGATGACGAGAAGGAGTGTGAGCTCTC CTCCGTCCACAAAAATGGCGNCCCCGGCGGGTTGGTGTGACGAGGTTGANTAGNTTTTTA AATACTTGACGTTAGAAACGTTGAGACCATATGTATAGACCAAATTTTTAATATATTTGT TGATGTTTTTTATATATTATATTGTACTAGAAAAGATGCCCGTGTGTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CTCCGTTGCAGCGAACGAGATCTGCGACCGGTTCGCCACGGCGGGGTTCGGCGCGAACCT 60
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GATCACGTACCTGACGCAGCAGCTGCACCTGCCGCTGGTGGAGGCGTCCAACACGCTGAC 120
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CAACTTCAACGGCACGTCCAGCCTCACCCCGATCCTGGGCGCGCTCGCCGCCGACGCCTT 180
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CGCCGGCCGCTTCTGGACCATCATCGCCGGATCCGTCTTCTACCAGCTCGGCATGCTCGC 240
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CCTCGTCGCGTCCGCGCTGCTCCCTTCGCTCCGCCCCGCGCCGTGCGCGCCGACGCACGG 300
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CGCTGCGTCGTGCCGCCGCGCCACCGGGTGGCAGCTCGCCGTGCTCTACCTCGCCCTGCT 360
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CTGCACGTCCCTCGGCTCCGGCGGCATCCGCCCCTGCGTGGTGGCGTTCGGCGCCGTCCA 420
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GTTCGACGGCCAGCAGCAGAAGCAGCGGCAGAAGGGTGGCGGTGGCGCGGCGGCGGCGGC 480
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GGCGGGGAGGAAGCGGAGCTACTTCAACCTCTACTTCTTCACGATGGGGCTCGCGGTGCT 540
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GCTCGCCCTGACGGTGGTGGTGTACATCCAGGAGAACGTGGGGTGGGGGTGGGGGTTCGG 600
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GATCCCGGCCATCGCCATGTTCGTCTCCATCGTGGTGTTCGTGGCAGGGTACCCGCTCTA 660
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CGTCAGGCTGAAGCCTGGGGGCAGCCCGTTCACGCGGCTGGCGCAGGTGGTCGCCGCCGC 720
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GTTCCGGAAGCGCCGCGCTGCCGTGCCGGAGGACCCCGGCATGCTGTACCAGGACAAGGA 780
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GCTCGACGCGCTCATCTCCACCAATGGCAGGCTGCTCCACACAAACCAGCTCACGTTCTT 840
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      TGACCGAGCTGCGATCGTGACGCCGGGTGACATCGCCGGCTCCGGCGAGCCGGACCTGTG 900
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GCGGCTGTCGGCGGTGCACCGCGTGGAGGAGCTCAAGTCCATCGTCCGGCTGCTGCCCAT 960
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CTGGTCGGCCGGCATCCTGCTCGCCACCGCCGCGTCGCACAACGGCACCTTCACCATCCA 1020
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GCAGGCGCGCACCATGGACCGCCACCTCACCCCTCGCTTGGAGATCCCGCCGGCGACCAT 1080
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GTCCATCTTCACGACGGTGGCGATGCTCGCCGGCCTCGCCCTCTACGACCGCGCCTTCGT 1140
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GCCCCTGGCGCGCCGCGTCACGGGCCTCCCCTCCGGGATCACCTACTTCCAGCGCATGGC 1200
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CATCGGGCTGGGCATCTCCATCCTCGGCGTCGCGTCGGCAGCGCTCGTCGAGGTGAGGCG 1260
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CCGCGGCGCCGCCGCGGACCACGGCCTCCTCGACAGCCCCGCCGCCGTCGTGCCCATCAG 1320
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CGTGTTCTGGCTGGTGCCGCAGTACGCCGTCCACGGCGTGGCGGAGGCGTTCTCGTCGGT 1380
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GGCGCACATGGAGTTCCTGTACGACCAGGCGCCGGAGAGCATGCGCAGCAGCGCCGCCGC 1440
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GCTCTTCTGGCTCTCCAGCTCCCTCGGCAACTACATGGGCACGGTGCTCGTCACGGCGGT 1500
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GCAGCGCGCCACGCGCGGCGGCGGCGAGTGGCTCCAGGACAACATCAACCGGGGCAGGCT 1560
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GGACTGCTACTACTGGCTCGTCACCACCCTCACGGTGCTCAACCTTGGATACTACCTCGT 1620
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      --AACAAACACTCAAGACAATTAACACGACAAATCATGGAGAGATCAGCCACCGTCTTTG 58
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CTGCTTCCACTTCTACACCATGAAGCCATTAGAGGTGGCAGAGGAAGACGATGACGAGAA 1680
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      TAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACGCCTGCG 118
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GGAGTGTGAGCTCTCCTCCGTCCACAAAAATGGCGGCCCCGGCGGGTTGGTGTGACGAGG 1740
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGAGCGTGGGCCCGGCCA 178
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      TAGATTAGGATAATTTTATCAGGGTGGATAATGTTGTTAATTACGGAGTACGAAGTAATT 1800
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      TGTCGCGGACGTGCGCCGAGACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGACGGACT 238
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      AGCTGTGCATGTGCATGCCAAATACAATGGTTGCAAAATACAGCCTTTAGGGCATGTACA 1860
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      TCATGGTGGCCGCCGCGAACGCCGCGACGGAGTCGTACAAGGCTGGCAAGGAGGCCGTCG 298
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      AAAATAGAGTCAGATATGAGTCTCTATATTATTTAGAGACTAGCATCTTACAACAGTTAG 1920
consensus_13341#2      -----------------------CTCCCTCATTAGG------GCATGT-ACAACAGTTAG 30
consensus_13341#1      GCAAGGTGCTCTCCAACCCGCTGGCGCCCGACGGCGAG-CGGCTGCCGTGCCTCGTGTGC 357
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      AGACAATATGGTTTCTAATCATTAATGTATCCAAATACTTTTTCTTACTCTTCTTTCCTT 1980
consensus_13341#2      AGATAATATGGTTTTTAATCATTAATGTATCCAAATACTTTTTTTTTCTCTTCTTTCCTT 90
consensus_13341#1      GCGAACAAGTACGACGACGCGTCGATGCTCGTCGCCAGCACCGCCGACGACGCCAAGCGC 417
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      TTTTTCACTATCATGCAACAAAATTTGCTCTAATAAATGCTAAGAGTCGACTCTGAGCCG 2040
consensus_13341#2      TCTTTCACTATCATGCAACAAAATTTACTCTAATAAATGCTAAGAGTCGACTCTGAGCCG 150
consensus_13341#1      TGCAAGCTGAGCGCCGACAGCCTCCCCGACCTCGTCACCGCCGTCTCTGCCGTCGACGAG 477
                                                                                   

consensus_13341#3      --------------------------------------------------CAGNTCCCTC 10
consensus_13341#0      TTGTCATGCATAACAACCATACTCCTTTCTCTTTCTTCCATGTCATCAAATTACTTGCAT 2100
consensus_13341#2      TTGTCATGCATAACAACCATACTCCTTTCTCTTTCTTCCATGTCATCAAATTACTTGCAT 210
consensus_13341#1      TGCGCCACGAAGATGTTCGAGGAGAGCGGGAACACGACGTCGGTGTACGCCACGGCCATC 537
                                                                                   

consensus_13341#3      GGCAACTACATGGGCACGGTGCTCGTCACG-GCGGTGCAAGCCGCCACGCGCGGCGG--- 66
consensus_13341#0      GGCAATAGAGAGAGACCACTAATAAAAACC-GTTGTACATGCACTTAGGATTAACTGAAA 2159
consensus_13341#2      GGCAATAGAGAGAGACCACTAATAAAAACC-GTTGTACATGCACTTAGGATTAACTGAAA 269
consensus_13341#1      ACCAATCGGGATTGGACCGTGCTCGTTCTGCGCCTCGCTACGTTGGTTGTGCCGCGCCAG 597
                         ***        *  *  *  *        *     *          *     *     

consensus_13341#3      -----CGGCGAGTGGCTCCAGGACAACATCA-ACCGGGGCAGGCTGGACTGCTA--CTAC 118
consensus_13341#0      AAGGCCTAAGAGAGATTCTGGCAAGGTTCCACATTTTGTTACTCAGTTTTGCTAACTCAC 2219
consensus_13341#2      AAGGCCTAAGAGAGATTCTGGCAAGGTTCCACATTTTGTTACTCAGTTTTGCTAACTCAC 329
consensus_13341#1      CAACTCAGCTAGTTCTGCCATG-CATCACCA-ATCGTGC--GATTGGATTGCTGG-TCGC 652
                            *    **     *           ** *    *       *   ****      *

consensus_13341#3      TGGCTCGTCACCACCCTCATGGTGCTCAACCTTGGATACTAC--CTCGTCTGCTTCCACT 176
consensus_13341#0      TAATAGAGAACCGATCTTTCGTAGATTAAAAACCGGTATTAAAGTTGCTTTACTACCGGT 2279
consensus_13341#2      TAATAGAGAACCGATCTTTCGTAGATTAAAAACCGGTATTAAAGTTGCTTTACTACCGGT 389
consensus_13341#1      CCTCCCTTGTCCTTCCTCGT----TCTAAGGCCGTGTTTTGTTTCCCTCATATTCCCAAC 708
                                 **   **          **       *  *          *  * **   

consensus_13341#3      TCTACACCATG----AAGCCATTAGAGGTGGC---AGAGGAAGACGATGACGAGAAGGAG 229
consensus_13341#0      TCTAAAAGTCC----AATTCCCTATAAACAACTTTAGTCTCGGTTGATGTTACTAACCGG 2335
consensus_13341#2      TCTAAAAGTCC----AATTCCCTATAAACAACTTTAGTCTCGGTTGATGTTACTAACCGG 445
consensus_13341#1      TTTCCATCACATCAAAAGCTTTCCTACACTCATAAACTTTCAACTTTTTTTCCAAACTCC 768
                       * *  *         **        *         *           *      **    

consensus_13341#3      TG------TGAGCTCTC--CTCC-------GTCCACAAAAATGGCGNCCCCGG-CGG-GT 272
consensus_13341#0      TAC-----TAAAAATGC--CTCCAGAGTTAGGTCAAAAGGAAAACGTCTCTATTCAA-GT 2387
consensus_13341#2      TAC-----TAAAAATGC--CTCCAGAGTTAGGTCAAAAGGAAAACGTCTCTATTCAA-GT 497
consensus_13341#1      CATTTCTTTAAACTTTCAACTTTTTTTAGGAACTAAACACACCCTAAATATGGCTGATAT 828
                               * *     *  **             * *   *                  *

consensus_13341#3      T-GGTGTG---A---CGAGGT-TGANTAGNTTTTTAAATACTTGACGTTAGAAACGTTGA 324
consensus_13341#0      CAGATGTGTAAA---TATAGT-TGGTGAGATGGTTATACGCGTGAGAGATAAGGTGA-GA 2442
consensus_13341#2      CAGATGTGTAAA---TATAGT-TGGTGAGATGGTTATACGCGTGAGAGATAAGGTGA-GA 552
consensus_13341#1      CAAGCATTAAAAACTTTAGCTATGAATAAATTTTAAAATACTT-ACGTTAGAAACGTTGA 887
                             *    *        * **   *  *  * * *  * * *      *   *  **

consensus_13341#3      GACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATA-----TTA 379
consensus_13341#0      GATCTTGAGTTTGAATCCTACATCCCACATATTTTTTTTCTCTTGCTATATGCATTTTTA 2502
consensus_13341#2      GATCTTGAGTTTGAATCCTACATCCCACATATTTTTTTTCTCTTGCTATATGCATTTTTA 612
consensus_13341#1      GACCATATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATA-----TTA 942
                       ** * *  ** *  * *  *  *   * ****** **     **  *****      ***

consensus_13341#3      TATTGTACTAGAAA-AGATGCCCGTGTGTTG----------------------------- 409
consensus_13341#0      GTTTTAACCGGTACTAAAGATCGACATCTT-AATCCCAATTTGCTCATCTCGGTTGCTAC 2561
consensus_13341#2      GTTTTAACCGGTACTAAAGATCGACATCTTTAATCCCAATTTGCTCATCTCGGTTGCTAC 672
consensus_13341#1      TATTGTACTAGAAA-AGATGCCCGTGTGTTG----------------------------- 972
                         **  **  * *  * *   *    * **                              

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CACCGGTAGTAAATGTGGTTGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTA 2621
consensus_13341#2      CACCGGTAGTAAATGTGGTTGTAAACCGGGAAAAAAAACGTTTCCCCTGTAGCGACTGTA 732
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      TAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTAT 2681
consensus_13341#2      TAAACTACGAAGTGACAAGTGACTGAATACCAAATTAAGCCTAGACACAGGGACTAGTAT 792
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GTATGGCAAGCTAGGTTTCTTCTTGAGTATATAGTATGATCCCTCTGATCGTTGTGACAG 2741
consensus_13341#2      GTA--------------------------------------------------------- 795
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      AGCTCAGCTGGGTGTAAATCGGAGCGCCTTGTGATCGACCCTCTGGAGGTGCGCTTCCCA 2801
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      TTTGAGAAGGACAGGGATGTATCCTGCGTGCTGCAGCTGACGAACAGGTCCGCCGATCGC 2861
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GTGGCGTTCGCCGTGCAGGTGGACGAGTCCAAGTACCGCGCGGTGCCGGACAGGGGCGTC 2921
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GTGCAGCCGCGGTCCAGGCGGTACATCGTCGCGACGTCGCGAGCGCAGGCGAGCGCGCCG 2981
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      ACCAACTTGCAGCGCGACGACTCGTTCCTCCTGCGGAGCAAGAGGGTGGAGGGCAGCGCC 3041
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GACGACGACTTTGCGGAAGACTTCGAAAAGCTGATGGGCAAGGCGGTGGATGGGGAGACG 3101
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      ATGAGGCTGCCGGTTGTCTATATCGCACTGCCTCTACCTCCTAGCAGTTAAGCGATTATA 3161
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      CGCAGCTGTCTGTCCTCATGTATCAGAGATCCGCTAGCTAGTCCGAATAATGTCCGATCC 3221
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      GTCGACATTTGCGTCTTAACAGCCTCGTGATTTATATATATGACTTTTGTGAAACTAGGA 3281
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------------------------------------
consensus_13341#0      AGATAGCCCACGCATATGTGCGGGCATTTGTTTAATGTGTTTATGTGCAGTTGGTTTTTT 3341
consensus_13341#2      ------------------------------------------------------------
consensus_13341#1      ------------------------------------------------------------
                                                                                   

consensus_13341#3      ------------------------------
consensus_13341#0      TATTGAAATATCATTTATACTCTATTCAAA 3371
consensus_13341#2      ------------------------------
consensus_13341#1      ------------------------------
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)