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Oryza sativa
cluster # 13356 cluster # 13356       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13356#0 length = 1980 sequences # 1  
consensus_13356#1 length = 1453 sequences # 7  
consensus_13356#2 length = 1057 sequences # 4  
consensus_13356#3 length = 233 sequences # 1  

consensusID : consensus_13356#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1980
fasta sequence
                              [TTTTCCCGCCCCCGCCAAAACCGCTGCCACGTCGTCGTCTCCCGCCAAAAAAAAAAAAGTAGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCGCAGGAGAAGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGGCCGGTCAGGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGAAATCGTAAGCTTGGATTATCCAATTTATTTCTAAATTTTTTTTCTTGAGTTACCAAGTATCTGGTTGAATAATCAAGGAAAAAACATGATCAAATTTTAGATTCAAACAGTGCATTTTCTTGTGTGTTTAATCAACCAAGAAGAAACTTTGTAGGACTTTGGTGCAATGCAATCGGCAGTTGCAGTTTACATTTTTGATTTCTGAAGATATTTCTTTCAGTTTCTGAATTTTGACATCGATTTGGCATCCATTTGCATCACATGATGTTCTGAGTTGCTCTGAACAGATTCCCCAACACATATTTGCTCGTGGGCTGCTGCAGCGACGAGATCACCAACCTTTACAAAGGCAAGACCGTCATGACTGAAGACGAGCGCTACGAATCGCTTCGCCATTGCAAGCAAGTTTTCACCTCCTCTATTGCACTTGTGCCATTCACACATTTGGAGATTTTTTTTTAAAAAAAGAACAATCTTACCATTTTGTTGTTAACTAAAAAAATGTGAAGGTGGGTGGATGAAGTGATACCAGATGCTCCATGGGTTATCAATCAGGAGTTCCTAGACAAGCACCGCATCGACTACGTCGCTCATGATGCTCTTCCGTAAGAACACAGTTATTATGCAGAACAAATTGCTCAAAAATAGTTATGTAGAATTGCAACAACATTGGACCTTCATATATATTTTCATGATTGTTTGTATGTGTAAAATAGCAGAAACAATGTGTGTAACTAACTTCATGTGATTGTTTCAGGTATGCGGACACCAGTGGAGCTGCCAATGATGTCTATGAATTTGTCAGGATCTCTGAATCTTCTCATGTTTCAACAAGCATTTCTGATGGCTATAGGTAGCTGAGTGCCTGATGTCTGAATGTTCGTGCAGGTGAAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTCTGACATCATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCGGGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGTGAGTATTCCATGATGAACTTCTCCAAGTGAAGAAGAAAAACAGGCACTGAATTATGTTGTTTTACTGTATGATCAGGAGAAGCAACTTAGAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTGAAGGAGCATCAAGAGAAGGTGATCAAGTAAATTGAAAAATCAAATGATCTTACAAAATTTTGGTACTAACTTTGCTGCATAATACATATGTAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAGTGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCACATGATGGTAAGTGGAGGAATTATTACATTTTGTCAATCTTGTAGAACTTTGACAATGAACAGTGCATTGCCACATGATCTGTTTTTTTTTTTCATTTGACAGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATATCCAGATCAAACTGGGAAGAGAAAAAATTGTGGAGATCATTTCTAGCCTTGTGTGAGATTAGCCTCATGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACCAAAAGGTTTTGTACTTCTGAGAACAATAATAATAGTTCGTGCA]

[+] EMBL AK120881             [TTTTCCCGCCCCCGCCAAAACCGCTGCCACGTCGTCGTCTCCCGCCAAAAAAAAAAAAGTAGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCGCAGGAGAAGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGGCCGGTCAGGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGAAATCGTAAGCTTGGATTATCCAATTTATTTCTAAATTTTTTTTCTTGAGTTACCAAGTATCTGGTTGAATAATCAAGGAAAAAACATGATCAAATTTTAGATTCAAACAGTGCATTTTCTTGTGTGTTTAATCAACCAAGAAGAAACTTTGTAGGACTTTGGTGCAATGCAATCGGCAGTTGCAGTTTACATTTTTGATTTCTGAAGATATTTCTTTCAGTTTCTGAATTTTGACATCGATTTGGCATCCATTTGCATCACATGATGTTCTGAGTTGCTCTGAACAGATTCCCCAACACATATTTGCTCGTGGGCTGCTGCAGCGACGAGATCACCAACCTTTACAAAGGCAAGACCGTCATGACTGAAGACGAGCGCTACGAATCGCTTCGCCATTGCAAGCAAGTTTTCACCTCCTCTATTGCACTTGTGCCATTCACACATTTGGAGATTTTTTTTTAAAAAAAGAACAATCTTACCATTTTGTTGTTAACTAAAAAAATGTGAAGGTGGGTGGATGAAGTGATACCAGATGCTCCATGGGTTATCAATCAGGAGTTCCTAGACAAGCACCGCATCGACTACGTCGCTCATGATGCTCTTCCGTAAGAACACAGTTATTATGCAGAACAAATTGCTCAAAAATAGTTATGTAGAATTGCAACAACATTGGACCTTCATATATATTTTCATGATTGTTTGTATGTGTAAAATAGCAGAAACAATGTGTGTAACTAACTTCATGTGATTGTTTCAGGTATGCGGACACCAGTGGAGCTGCCAATGATGTCTATGAATTTGTCAGGATCTCTGAATCTTCTCATGTTTCAACAAGCATTTCTGATGGCTATAGGTAGCTGAGTGCCTGATGTCTGAATGTTCGTGCAGGTGAAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTCTGACATCATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCGGGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGTGAGTATTCCATGATGAACTTCTCCAAGTGAAGAAGAAAAACAGGCACTGAATTATGTTGTTTTACTGTATGATCAGGAGAAGCAACTTAGAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTGAAGGAGCATCAAGAGAAGGTGATCAAGTAAATTGAAAAATCAAATGATCTTACAAAATTTTGGTACTAACTTTGCTGCATAATACATATGTAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAGTGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCACATGATGGTAAGTGGAGGAATTATTACATTTTGTCAATCTTGTAGAACTTTGACAATGAACAGTGCATTGCCACATGATCTGTTTTTTTTTTTCATTTGACAGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATATCCAGATCAAACTGGGAAGAGAAAAAATTGTGGAGATCATTTCTAGCCTTGTGTGAGATTAGCCTCATGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACCAAAAGGTTTTGTACTTCTGAGAACAATAATAATAGTTCGTGCA]


>consensus_13356#0 TTTTCCCGCCCCCGCCAAAACCGCTGCCACGTCGTCGTCTCCCGCCAAAAAAAAAAAAGT AGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCGCAGGAGA AGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGGCCGGTCA GGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGC AGGCCAAGAAATCGTAAGCTTGGATTATCCAATTTATTTCTAAATTTTTTTTCTTGAGTT ACCAAGTATCTGGTTGAATAATCAAGGAAAAAACATGATCAAATTTTAGATTCAAACAGT GCATTTTCTTGTGTGTTTAATCAACCAAGAAGAAACTTTGTAGGACTTTGGTGCAATGCA ATCGGCAGTTGCAGTTTACATTTTTGATTTCTGAAGATATTTCTTTCAGTTTCTGAATTT TGACATCGATTTGGCATCCATTTGCATCACATGATGTTCTGAGTTGCTCTGAACAGATTC CCCAACACATATTTGCTCGTGGGCTGCTGCAGCGACGAGATCACCAACCTTTACAAAGGC AAGACCGTCATGACTGAAGACGAGCGCTACGAATCGCTTCGCCATTGCAAGCAAGTTTTC ACCTCCTCTATTGCACTTGTGCCATTCACACATTTGGAGATTTTTTTTTAAAAAAAGAAC AATCTTACCATTTTGTTGTTAACTAAAAAAATGTGAAGGTGGGTGGATGAAGTGATACCA GATGCTCCATGGGTTATCAATCAGGAGTTCCTAGACAAGCACCGCATCGACTACGTCGCT CATGATGCTCTTCCGTAAGAACACAGTTATTATGCAGAACAAATTGCTCAAAAATAGTTA TGTAGAATTGCAACAACATTGGACCTTCATATATATTTTCATGATTGTTTGTATGTGTAA AATAGCAGAAACAATGTGTGTAACTAACTTCATGTGATTGTTTCAGGTATGCGGACACCA GTGGAGCTGCCAATGATGTCTATGAATTTGTCAGGATCTCTGAATCTTCTCATGTTTCAA CAAGCATTTCTGATGGCTATAGGTAGCTGAGTGCCTGATGTCTGAATGTTCGTGCAGGTG AAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTCTGACATC ATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCGGGGATAC TCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGTGAGTATTCCATGATGAACTTCTCCA AGTGAAGAAGAAAAACAGGCACTGAATTATGTTGTTTTACTGTATGATCAGGAGAAGCAA CTTAGAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTGAAGGAGCATCAAGAGAAG GTGATCAAGTAAATTGAAAAATCAAATGATCTTACAAAATTTTGGTACTAACTTTGCTGC ATAATACATATGTAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAGTGG ATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCAC ATGATGGTAAGTGGAGGAATTATTACATTTTGTCAATCTTGTAGAACTTTGACAATGAAC AGTGCATTGCCACATGATCTGTTTTTTTTTTTCATTTGACAGGAAACCGCGATTAAAGAT CGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGAT TCCGACTCATAATGGATCCTGTAATATCCAGATCAAACTGGGAAGAGAAAAAATTGTGGA GATCATTTCTAGCCTTGTGTGAGATTAGCCTCATGTTGTAGGACAATTAAAGTGACCGTG CATGGTTTGTTTGTACCAAAAGGTTTTGTACTTCTGAGAACAATAATAATAGTTCGTGCA



consensusID : consensus_13356#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1453
fasta sequence
                              [GTTCCCTTTTTATTGAGAGGATCCCCTCCCTCGTGTCGACACGATCGTCCAAAATAGGGAAGAGGGAGGGGGTTCTTCTTCTCCTCGATCCGGTTGAGGACTTTGAGGTAGAGAGAGGCAGAGGCGACGAGGAAGGATCTGATCTATCGATGGCGCGCGTTTCGCATTCCAGAAAGCGGACTAGGGCTCCCTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGCCGGAGCTCACCGACCGCCCTGTCCGCGTCTACGCCGACGGCATCTTCGATCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCTGTTCCCCAACACGTACCTGCTAGTGGGCTGCTGCAACGACGAGCTCACCAACCGCTACAAGGGCAAGACCGTCATGACCCAGGATGAGCGATACGAGTCCCTTCGCCACTGCAAATGGGTTGATGAGGTCATTCCTGATGCTCCATGGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTATGTTGCTCATGATGCACTGCCTTATGCCGATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTTAAAAAGATTGGCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATCAGACCTCATAATGAGGATATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACGTGGATACACAAGGAAAGATTTAGGCGTAAGC-TATGTTAAGGAAAAGCAACTCCAGGTCAACATGAAGATAAATAAACTGCGAGAGACTGTAAAGGCGCATCAAGAAAAGTTGCAAACGGTGGCGAAGACAGCTGGAATAAATCATGAAGAATGGTTGGCCAATGCAGATCGCTGGGTTGCTGGTTTCTTGGAGAAGTTTGAGGAACACTGCCACAACATGGAAACTGCCATCAAGGGGCGTATCCAGGAGAAATTGAGGAGGCAAACAAGCAGAGGGATAATTGGGGGTCTAATGCAGCAACCGGTGGCAGCGTAATAAGTTGTAGAGGAGAGATGACGTTGAGTTGGAGTAAGCTGCCCTGGGGTCACCACGGACGAGAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGTGTGAGTGTGTGCTTGTGTCATGGAATGTGATGCTTGTACGAGTTGTTACAGCTTAATTACATGGGAGAGGCTTTGTTTCTTGTTTATTTTTTTGCGGGGGGTGGGGGTGTTGGTTTCCTTGTATACAAATGTCTATAGCAGAGGCGTTTGGTGCATAATCCAGAGTGTGTAGTAGGTGTTGGACAGATGAAGTTGAGTGGTACTGTAGTGTTGTTGTTCTCTTCCCTTGGGTTTTGTCTGTAACGTCGAGAGGGAGAGATGTTGACGCTGGCTGAAAGCACAACACAAGCAGAGTGATATTATACTACTACTAGTAATTTACTTATTAAAAA]

[+] EMBL AK073939             [GTTCCCTTTTTATTGAGAGGATCCCCTCCCTCGTGTCGACACGATCGTCCAAAATAGGGAAGAGGGAGGGGGTTCTTCTTCTCCTCGATCCGGTTGAGGACTTTGAGGTAGAGAGAGGCAGAGGCGACGAGGAAGGATCTGATCTATCGATGGCGCGCGTTTCGCATTCCAGAAAGCGGACTAGGGCTCCCTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGCCGGAGCTCACCGACCGCCCTGTCCGCGTCTACGCCGACGGCATCTTCGATCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCTGTTCCCCAACACGTACCTGCTAGTGGGCTGCTGCAACGACGAGCTCACCAACCGCTACAAGGGCAAGACCGTCATGACCCAGGATGAGCGATACGAGTCCCTTCGCCACTGCAAATGGGTTGATGAGGTCATTCCTGATGCTCCATGGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTATGTTGCTCATGATGCACTGCCTTATGCCGATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTTAAAAAGATTGGCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATCAGACCTCATAATGAGGATATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACGTGGATACACAAGGAAAGATTTAGGCGTAAGC TATGTTAAGGAAAAGCAACTCCAGGTCAACATGAAGATAAATAAACTGCGAGAGACTGTAAAGGCGCATCAAGAAAAGTTGCAAACGGTGGCGAAGACAGCTGGAATAAATCATGAAGAATGGTTGGCCAATGCAGATCGCTGGGTTGCTGGTTTCTTGGAGAAGTTTGAGGAACACTGCCACAACATGGAAACTGCCATCAAGGGGCGTATCCAGGAGAAATTGAGGAGGCAAACAAGCAGAGGGATAATTGGGGGTCTAATGCAGCAACCGGTGGCAGCGTAATAAGTTGTAGAGGAGAGATGACGTTGAGTTGGAGTAAGCTGCCCTGGGGTCACCACGGACGAGAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGTGTGAGTGTGTGCTTGTGTCATGGAATGTGATGCTTGTACGAGTTGTTACAGCTTAATTACATGGGAGAGGCTTTGTTTCTTGTTTATTTTTTTGCGGGGGGTGGGGGTGTTGGTTTCCTTGTATACAAATGTCTATAGCAGAGGCGTTTGGTGCATAATCCAGAGTGTGTAGTAGGTGTTGGACAGATGAAGTTGAGTGGTACTGTAGTGTTGTTGTTCTCTTCCCTTGGGTTTTGTCTGTAACGTCGAGAGGGAGAGATGTTGACGCTGGCTGAAAGCACAACACAAGCAGAGTG                                    ]
[+] EMBL C26593               [                                 TGTCGACACGATCGTCCAAAATAGGGAAGAGGGAGGGGGTTCTTCTTCTCCTCGATCCGGTTGAGGACTTTNAGGTAGAGAGAGGCAGAGGCGACGAGGAAGGATCTGATCTATCGATGGCGCGNGTTTCGCATTCCAGAAAGCGGACTAGGGCTCCNTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGTCGGAGCTCACCGACCNNCCTGTCCGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF280627             [                                                CCAAAATAGGGAAGAGGGAGGGGGTTCTTCTTCTCCTCGATCCGGTTGAGGACTTTGAGGTAGAGAGAGGCAGAGGCGACGAGGAAGGATCTGATCTATCGATGGCGCGCGTTTCGCATTCCAGAAAGCGGACTAGGGCTCCCTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGCCGGAGCTCACCGACCGCCCTGTCCGCGTCTACGCCGACGGCATCTTCGATCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCTGTTCCCCAACACGTACCTGCTAGTGGGCTGCTGCAACGACGAGCTCACCAACCGCTACAAGGGCAAGACCGTCATGACCCAGGATGAGCGATACGAGTCCCTTCGCCACTGCAAATGGGTTGATGAGGTCATTCCTGATGCTCCATGGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTATGTTGCTCATGATGCACTGCCTTATGCCGATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTTAAAAAGATTGGCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATCAGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK060631             [                                                 CAAAATAGGGAAGAGGGAGGGGGTTCTTCTTCTCCTCGATCCGGTTGAGGACTTTGAGGTAGAGAGAGGCAGAGGCGACGAGGAAGGATCTGATCTATCGATGGCGCGCGTTTCGCATTCCAGAAAGCGGACTAGGGCTCCCTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGCCGGAGCTCACCGACCGCCCTGTCCGCGTCTACGCCGACGGCATCTTCGATCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCTGTTCCCCAACACGTACCTGCTAGTGGGCTGCTGCAACGACGAGCTCACCAACCGCTACAAGGGCAAGACCGTCATGACCCAGGATGAGCGATACGAGTCCCTTCGCCACTGCAAATGGGTTGATGAGGTCATTCCTGATGCTCCATGGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTATGTTGCTCATGATGCACTGCCTTATGCCGATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTTAAAAAGATTGGCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATCAGACCTCATAATGAGGATATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACGTGGATACACAAGGAAAGATTTAGGCGTAAGC TATGTTAAGGAAAAGCAACTCCAGGTCAACATGAAGATAAATAAACTGCGAGAGACTGTAAAGGCGCATCAAGAAAAGTTGCAAACGGTGGCGAAGACAGCTGGAATAAATCATGAAAAATGGTTGGCCAATGCAGATCGCTGGGTTGCTGGTTTCTTGGAGAAGTTTGAGGAACACTGCCACAACATGGAAACTGCCATCAAGGGGCGTATCCAGGAGAAATTGAGGAGGCAAACAAGCAGAGGGATAATTGGGGGTCTAATGCAGCAACCGGTGGCAGCGTAATAAGTTGTAGAGGAGAGATGACGTTGAGTTGGAGTAAGCTGCCCTGGGGTCACCACGGACGAGAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGTGTGAGTGTGTGCTTGTGTCATGGAATGTGATGCTTGTACGAGTTGTTACAGCTTAATTACATGGGAGAGGCTTT                                                                                                                                                                                                                                                                  ]
[+] EMBL AF140496             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACGTGGATACTCAAGGAAAGATTTAGGCGT AGCTTATGTTAAGGAAAAGCAACTCCAGGTCAACATGAAGATAAATAAACTGCGAGAGACTGTAAAGGCGCATCAAGAAAAGTTGCAAACGGTGGCGAAGACAGCTGGAATAAATCATGAAGAATGGTTGGCCAATGCAGATCGCTGGGTTGCTGGTTTCTTGGAGAAGTTTGAGGAACACTGCCACAACATGGAAACTGCCATCAAGGGGCGTATCCAGGAGAAATTGAGGAGGCAAACAAGCAGAGGGATAATTGGGGGTCTAATGCAGCAACCGGTGGCAGCGTAATAAGTTGTAGAGGAGAGATGACGTTGAGTTGGAGTAAGCTGCCCTGGGGTCACCACGGACGAGAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGTGTGAGTGTGTGCTTGTGTCATGGAATG                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF326280             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAACAATCTCAGGGATACTTGGGGGTCTAATGCCGCACCCGGAGGCATCGTAATAAGGTGTTGAGGAGAGATGACGTTGAGTTGGACTAAGCTGCCCTGGGGTCACCACGGACTACAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGTGTGAGTGTGTGCTTGTGTCATGGAATGTGATGCTTGTACGAGTTGTTACAGCTTAGTTACATGGGAGAGGCTTTGTTTCTTGTT                                                                                                                                                                                                                                                        ]
[+] EMBL AU166467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCAGCGTAATAAGTTGTANAGGANAGATGACGTTGAGTTGGAGTAAGCTGCCCTGGGGTCACCNCGGACGAGAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGTGTGAGTGTGNGCTTGTGTCATGGAATGTGATGCTTGTACGAGTTGTTNCAGCTTAATTACATGGGAGAGGCTTTGTTTCTTGTTTATTTTTTTGCGGGGGGTGGGGGTGTTGGTTTCCTTGTANACAAATGTCTATAGCAGAGGCGTTTGGTGCATAATCCAGAGTGTGTAGTAGGTGTTGGNCAGATNAAGTTGAGTGGTACTGTAGTGTTGTTGTTCTCTTCCCTTGGGTTTTGTCTGTAACGTCGAGAGGGANAGATGTTGACGCTGGCTGNAAGCACAACNCAAGCAGAGTGATATTATACTACTACTAGTAATTTACTTATTAAAAA]


>consensus_13356#1 GTTCCCTTTTTATTGAGAGGATCCCCTCCCTCGTGTCGACACGATCGTCCAAAATAGGGA AGAGGGAGGGGGTTCTTCTTCTCCTCGATCCGGTTGAGGACTTTGAGGTAGAGAGAGGCA GAGGCGACGAGGAAGGATCTGATCTATCGATGGCGCGCGTTTCGCATTCCAGAAAGCGGA CTAGGGCTCCCTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGCCGG AGCTCACCGACCGCCCTGTCCGCGTCTACGCCGACGGCATCTTCGATCTCTTCCACTTCG GCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCTGTTCCCCAACACGTACCTGCTAGTGG GCTGCTGCAACGACGAGCTCACCAACCGCTACAAGGGCAAGACCGTCATGACCCAGGATG AGCGATACGAGTCCCTTCGCCACTGCAAATGGGTTGATGAGGTCATTCCTGATGCTCCAT GGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTATGTTGCTCATGATGCAC TGCCTTATGCCGATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTTAAAAAGATTG GCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATCAGACCTCATAATGAGGA TATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACGTGGATACACAAGGAAAG ATTTAGGCGTAAGCTATGTTAAGGAAAAGCAACTCCAGGTCAACATGAAGATAAATAAAC TGCGAGAGACTGTAAAGGCGCATCAAGAAAAGTTGCAAACGGTGGCGAAGACAGCTGGAA TAAATCATGAAGAATGGTTGGCCAATGCAGATCGCTGGGTTGCTGGTTTCTTGGAGAAGT TTGAGGAACACTGCCACAACATGGAAACTGCCATCAAGGGGCGTATCCAGGAGAAATTGA GGAGGCAAACAAGCAGAGGGATAATTGGGGGTCTAATGCAGCAACCGGTGGCAGCGTAAT AAGTTGTAGAGGAGAGATGACGTTGAGTTGGAGTAAGCTGCCCTGGGGTCACCACGGACG AGAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGTGTGAGTGTGTGCTTGTGTC ATGGAATGTGATGCTTGTACGAGTTGTTACAGCTTAATTACATGGGAGAGGCTTTGTTTC TTGTTTATTTTTTTGCGGGGGGTGGGGGTGTTGGTTTCCTTGTATACAAATGTCTATAGC AGAGGCGTTTGGTGCATAATCCAGAGTGTGTAGTAGGTGTTGGACAGATGAAGTTGAGTG GTACTGTAGTGTTGTTGTTCTCTTCCCTTGGGTTTTGTCTGTAACGTCGAGAGGGAGAGA TGTTGACGCTGGCTGAAAGCACAACACAAGCAGAGTGATATTATACTACTACTAGTAATT TACTTATTAAAAA



consensusID : consensus_13356#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1057
fasta sequence
                              [AAAAAGTAGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCGCAGGAGAAGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGGCCGGTCAGGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGAAATCATTCCCCAACACATATTTGCTCGTGGGCTGCTGCAGCGACGAGATCACCAACCTTTACAAAGGCAAGACCGTCATGACTGAAGACGAGCGCTACGAATCGCTTCGCCATTGCAAGTGGGTGGATGAGGTGATACCAGATGCTCCATGGGTTATCAATCAGGAGTTCCTAGACAAGCACCGCATCGACTACGTCGCTCATGATGCTCTTCCGTATGCGGACACCAGTGGAGCTGCCAATGATGTCTATGAATTTGTGAAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTCTGACATCATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCGGGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGAGAAGCAACTTAGAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTGAAGGAGCATCAAGAGAAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAGTGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCACATGATGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATATCCAGATCAAACTGGGAAGAGAAAAAATTGTGGAGATCATTTCTAGCCTTGTGTGAGATTAG-CCTCATGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACC-AAAAGGTTTTGTACTTCTGAGAACAATAATAATAGTTCGTGCAATTACTGCTC]

[+] EMBL AK059796             [AAAAAGTAGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCGCAGGAGAAGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGGCCGGTCAGGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGAAATCATTCCCCAACACATATTTGCTCGTGGGCTGCTGCAGCGACGAGATCACCAACCTTTACAAAGGCAAGACCGTCATGACTGAAGACGAGCGCTACGAATCGCTTCGCCATTGCAAGTGGGTGGATGAGGTGATACCAGATGCTCCATGGGTTATCAATCAGGAGTTCCTAGACAAGCACCGCATCGACTACGTCGCTCATGATGCTCTTCCGTATGCGGACACCAGTGGAGCTGCCAATGATGTCTATGAATTTGTGAAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTCTGACATCATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCGGGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGAGAAGCAACTTAGAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTGAAGGAGCATCAAGAGAAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAGTGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCACATGATGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATATCCAGATCAAACTGGGAAGAGAAAAAATTGTGGAGATCATTTCTAGCCTTGTGTGAGATTAG CCTCATGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACC AAAAGGTTTTGTACTTCTGAGAACAATAATAATAGTTCGTGCAATTACTGCTC]
[+] EMBL CA766897             [                                                                                                                                                                                                                                                                                                                                                                                                         aaggggGATGCTCTTCCGTATGCGGACACCAGTGGAGCTGCCAATGATGTCTATGAATTTGTGAAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTCTGACATCATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCGGGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGAGAAGCAACTTAGAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTGAAGGAGCATCAAGAGAAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAGTGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCACATGATGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATATCCAGATCAAACTGGGAAGAGAAAAAATTGTGGAGATCATTTCTAGCCTTGTGTGAGATTAG CCTCATGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACCAAAAAGGTTTTGTACTTCTGAGAACAATAATAATAGTTCGTGCA          ]
[+] EMBL BF475192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAATCTGACCCGGGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGAGAAGCAACTTACAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTGAAGGAGCATCAAGAGAAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAGTGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCACATGATGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATATCCAGATCAAACTGGGAAGAGAAACAATCGTGGAGATCATTTCTAGCCTTGTGTGACATTAGCCCTCATGTCGTACGACAAatt                                                                                  ]
[+] EMBL AA751248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACAGCGCGGCAAAGATAGCTGGAA SAATCCTGTGGAGTGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGCCACATGATGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGGTCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATAT CAGATC AACTGG                                                                                                                                                       ]


>consensus_13356#2 AAAAAGTAGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCG CAGGAGAAGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGG CCGGTCAGGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCC CTCGAGCAGGCCAAGAAATCATTCCCCAACACATATTTGCTCGTGGGCTGCTGCAGCGAC GAGATCACCAACCTTTACAAAGGCAAGACCGTCATGACTGAAGACGAGCGCTACGAATCG CTTCGCCATTGCAAGTGGGTGGATGAGGTGATACCAGATGCTCCATGGGTTATCAATCAG GAGTTCCTAGACAAGCACCGCATCGACTACGTCGCTCATGATGCTCTTCCGTATGCGGAC ACCAGTGGAGCTGCCAATGATGTCTATGAATTTGTGAAGGCCGTTGGGAAGTTCAAGGAG ACGAAGCGCACCGAGGGCGTCTCGACGTCTGACATCATCATGAGGATCTTGAAGGACTAC AACCAGTACATCATGCGAAATCTGACCCGGGGATACTCCCGCAAAGACCTCGGTGTGAGC TATGTCAAGGAGAAGCAACTTAGAGTAAACATGGGGATCAGCAAGCTAAGGGAGAAGGTG AAGGAGCATCAAGAGAAGTTTCACAGCGCGGCAAAGATAGCTGGAAGCAATCCTGTGGAG TGGATGGAGAATGCCGACCGTTGGATCGTTGGGTTTCTTGAAAAGTTTGAGGAAGGTTGC CACATGATGGAAACCGCGATTAAAGATCGGATTCAGGAGGGGCTGAAGAGGCAAAGCAGG TCGGACCCCAACCTTTCTGGGGAGGATTCCGACTCATAATGGATCCTGTAATATCCAGAT CAAACTGGGAAGAGAAAAAATTGTGGAGATCATTTCTAGCCTTGTGTGAGATTAGCCTCA TGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACCAAAAGGTTTTGTACTT CTGAGAACAATAATAATAGTTCGTGCAATTACTGCTC



consensusID : consensus_13356#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 233
fasta sequence
                              [TTTTTTTTTTTTGATACCAACAGATGCAACATACAACTAGGAAAACTGTACAAAGTTCAGTTTGTGCCTTTGTGGCATAGATACGCACATGATCCTTCAGTACAAGATGCAAAACATGCAGATTATCAGTGCAAGATGCAAATAGATAACCTTGAGCAGTAATTGCACGAACTATTATTATTGTTCTCGGAAGTACAAAACCTTTTAGTACAAACCCCCTTGTCTCGTCCTCT]

[+] EMBL CA760490             [TTTTTTTTTTTTGATACCAACAGATGCAACATACAACTAGGAAAACTGTACAAAGTTCAGTTTGTGCCTTTGTGGCATAGATACGCACATGATCCTTCAGTACAAGATGCAAAACATGCAGATTATCAGTGCAAGATGCAAATAGATAACCTTGAGCAGTAATTGCACGAACTATTATTATTGTTCTCGGAAGTACAAAACCTTTTAGTACAAACCCCCTTGTCTCGTCCTCT]


>consensus_13356#3 TTTTTTTTTTTTGATACCAACAGATGCAACATACAACTAGGAAAACTGTACAAAGTTCAG TTTGTGCCTTTGTGGCATAGATACGCACATGATCCTTCAGTACAAGATGCAAAACATGCA GATTATCAGTGCAAGATGCAAATAGATAACCTTGAGCAGTAATTGCACGAACTATTATTA TTGTTCTCGGAAGTACAAAACCTTTTAGTACAAACCCCCTTGTCTCGTCCTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13356#0      -------TTTTCCCGCCCCCGCCAAAACCGCTGCCACGTCGTCGTCTCCCGCCAAAAAAA 53
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      GTTCCCTTTTTATTGAGAGGATCCCCTCCCTCGTGTCGACACGATCGTCCAAAATAGGGA 60
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      AAAAAGTAGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCG 113
consensus_13356#2      AAAAAGTAGGCTTTGGGATCGCCGCCGGTGACGATGAAGCCACTGAAGGACGCGGACGCG 60
consensus_13356#1      AGAGGGAGGGGGTTCTTCTTCTCCTCGATCCGGTTGAGGACTTTGAGGTAGAGAGAGGCA 120
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CAGGAGAAGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGG 173
consensus_13356#2      CAGGAGAAGGCGGCGCCGCCGCCGACGGAGTGGTACGACCCGCTGTCGTCGCCGGGGCGG 120
consensus_13356#1      ---GAGGCGACGAGGAAGGATCTGATCTATCGATGGCGCGCGTT-TCGCATTCCAGAAAG 176
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CCGGTCAGGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCC 233
consensus_13356#2      CCGGTCAGGGTGTACGCCGATGGCATCTACGACCTCTTCCACTTCGGCCATGCCCGCGCC 180
consensus_13356#1      CGGACTAGGGCTCCCTCCAACTCCAACTCCAAGC----CCACTTCACAAACCCAACCGCC 232
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CTCGAGCAGGCCAAGAAATCGTAAGCTTGGATTATCCAATTTATTTCTAAATTTTTTTTC 293
consensus_13356#2      CTCGAGCAGGCCAAGAAATC---------------------------------------- 200
consensus_13356#1      GCCGCCGGAGCTCACCGACCGC-------------CCTGTCCGCGTCTA----------- 268
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      TTGAGTTACCAAGTATCTGGTTGAATAATCAAGGAAAAAACATGATCAAATTTTAGATTC 353
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      ------------------------------------------------------------
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      AAACAGTGCATTTTCTTGTGTGTTTAATCAACCAAGAAGAAACTTTGTAGGACTTTGGTG 413
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      ------------------------------------------------------------
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CAATGCAATCGGCAGTTGCAGTTTACATTTTTGATTTCTGAAGATATTTCTTTCAGTTTC 473
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      ----------------CGCCGACGGCATCTTCGATCTCT--------------------- 291
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      TGAATTTTGACATCGATTTGGCATCCATTTGCATCACATGATGTTCTGAGTTGCTCTGAA 533
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      ------------TCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCT----- 334
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CAGATTCCCCAACACATATTTGCTCGTGGGCTGCTGCAGCGACGAGATCACCAACCTTTA 593
consensus_13356#2      ---ATTCCCCAACACATATTTGCTCGTGGGCTGCTGCAGCGACGAGATCACCAACCTTTA 257
consensus_13356#1      ---GTTCCCCAACACGTACCTGCTAGTGGGCTGCTGCAACGACGAGCTCACCAACCGCTA 391
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CAAAGGCAAGACCGTCATGACTGAAGACGAGCGCTACGAATCGCTTCGCCATTGCAAGCA 653
consensus_13356#2      CAAAGGCAAGACCGTCATGACTGAAGACGAGCGCTACGAATCGCTTCGCCATTGCAAG-- 315
consensus_13356#1      CAAGGGCAAGACCGTCATGACCCAGGATGAGCGATACGAGTCCCTTCGCCACTGCAAA-- 449
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      AGTTTTCACCTCCTCTATTGCACTTGTGCCATTCACACATTTGGAGATTTTTTTTTAAAA 713
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      ------------------------------------------------------------
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      AAAGAACAATCTTACCATTTTGTTGTTAACTAAAAAAATGTGAAGGTGGGTGGATGAAGT 773
consensus_13356#2      ----------------------------------------------TGGGTGGATGAGGT 329
consensus_13356#1      ----------------------------------------------TGGGTTGATGAGGT 463
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GATACCAGATGCTCCATGGGTTATCAATCAGGAGTTCCTAGACAAGCACCGCATCGACTA 833
consensus_13356#2      GATACCAGATGCTCCATGGGTTATCAATCAGGAGTTCCTAGACAAGCACCGCATCGACTA 389
consensus_13356#1      CATTCCTGATGCTCCATGGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTA 523
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CGTCGCTCATGATGCTCTTCCGTAAGAACACAGTTATTATGCAGAACAAATTGCTCAAAA 893
consensus_13356#2      CGTCGCTCATGATGCTCTTCCGTA------------------------------------ 413
consensus_13356#1      TGTTGCTCATGATGCACTGCCTTA------------------------------------ 547
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      ATAGTTATGTAGAATTGCAACAACATTGGACCTTCATATATATTTTCATGATTGTTTGTA 953
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      ------------------------------------------------------------
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      TGTGTAAAATAGCAGAAACAATGTGTGTAACTAACTTCATGTGATTGTTTCAGGTATGCG 1013
consensus_13356#2      --------------------------------------------------------TGCG 417
consensus_13356#1      --------------------------------------------------------TGCC 551
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GACACCAGTGGAGCTGCCAATGATGTCTATGAATTTGTCAGGATCTCTGAATCTTCTCAT 1073
consensus_13356#2      GACACCAGTGGAGCTGCCAATGATGTCTATGAATTTGT---------------------- 455
consensus_13356#1      GATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTT--------------------- 590
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GTTTCAACAAGCATTTCTGATGGCTATAGGTAGCTGAGTGCCTGATGTCTGAATGTTCGT 1133
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      ------------------------------------------------------------
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GCAGGTGAAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTC 1193
consensus_13356#2      ------GAAGGCCGTTGGGAAGTTCAAGGAGACGAAGCGCACCGAGGGCGTCTCGACGTC 509
consensus_13356#1      -------AAAAAGATTGGCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATC 643
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      TGACATCATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCG 1253
consensus_13356#2      TGACATCATCATGAGGATCTTGAAGGACTACAACCAGTACATCATGCGAAATCTGACCCG 569
consensus_13356#1      AGACCTCATAATGAGGATATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACG 703
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGGTGA-GTATTCCATGATGAA 1312
consensus_13356#2      GGGATACTCCCGCAAAGACCTCGGTGTGAGCTATGTCAAGG------------------- 610
consensus_13356#1      TGGATACACAAGGAAAGATTTAGGCGTAAGCTATGTTAAGGAAAAGCAACTCCAGGTCAA 763
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CTTCTC--CAAGTGAAGAAGAAAAACAGGCACTGAATTATGTTGTTTTACTGTATGATCA 1370
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      CATGAAGATAAATAAACTGCGAGAGACTGTAAAGGCGCATCAAGAAAAGTTGCAAACGGT 823
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GGAGAAGCAACTTAGAGTAAA-CATGGGGATCAGCAAGCTAAGGGAGA-----AGGTGAA 1424
consensus_13356#2      --AGAAGCAACTTAGAGTAAA-CATGGGGATCAGCAAGCTAAGGGAGA-----AGGTGAA 662
consensus_13356#1      GGCGAAGACAGCTGGAATAAATCATGAAGAATGGTTGGCCAATGCAGATCGCTGGGTTGC 883
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GGAGCATCAAGAGAAGGTGATCAAGTAAATTGAAAAATCAAATGATCTTACAAAATTTTG 1484
consensus_13356#2      GGAGCATCAAGAGAAG-------------------------------------------- 678
consensus_13356#1      TGGTTTCTTGGAGAAGTTTGAGGAACACTGCCACAACATGGAAACTGCCATCAAGGGGCG 943
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      GTACTAACTTTGCTGCATAATACATAT-----GTAGTTTCACAGCGCGGCAAAGATAGC- 1538
consensus_13356#2      ------------------------------------TTTCACAGCGCGGCAAAGATAGC- 701
consensus_13356#1      TATCCAGGAGAAATTGAGGAGGCAAACAAGCAGAGGGATAATTGGGGGTCTAATGCAGCA 1003
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      --TGGAAGCAATCCTGTGGA--GTGGATGGAGAATGCCGACC-GTTGGATCGTTGGGTTT 1593
consensus_13356#2      --TGGAAGCAATCCTGTGGA--GTGGATGGAGAATGCCGACC-GTTGGATCGTTGGGTTT 756
consensus_13356#1      ACCGGTGGCAGCGTAATAAGTTGTAGAGGAGAGATGACGTTGAGTTGGA--GTAAGCTGC 1061
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CTTGAAAAGTTTGAGGAAGGTTGCCACA-TGATGGTAAGTGGAGGAATTATTACATTTTG 1652
consensus_13356#2      CTTGAAAAGTTTGAGGAAGGTTGCCACA-TGATGG------------------------- 790
consensus_13356#1      CCTGGGGTCACCACGGACGAGAAATGTAGTGAAGATGCCTTCTTGGTTGGCGGTTATAGT 1121
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      TCAATCTTGTAGAACTTTGACAATGAACAGTGCATTGCCACATGATCTGTTTTTTTTTTT 1712
consensus_13356#2      ------------------------------------------------------------
consensus_13356#1      GTGAGTGTGTG---CTTGTGTCATGGAATGTG-ATGCTTGTACGAGTTGTTACAGCTTAA 1177
consensus_13356#3      ------------------------------------------------------------
                                                                                   

consensus_13356#0      CATTTGACAGGAAACCGCGATTAAAGATCGGATTCAGG-AGGGGCTGAAGAGGCAAAGCA 1771
consensus_13356#2      -----------AAACCGCGATTAAAGATCGGATTCAGG-AGGGGCTGAAGAGGCAAAGCA 838
consensus_13356#1      TTACATGGGAGAGGCTTTGTTTCTTGTTTATTTTTTTGCGGGGGGTGGGGGTGTTGGTTT 1237
consensus_13356#3      ---------------------------TTTTTTTTTTTTGATACCAACAGATGCAACATA 33
                                                  *    **               *  *       

consensus_13356#0      GGTCGGACCCCAACCTTTCTGG-GGAGGATTCCGACTCATAATGGATCCTGTAATATCCA 1830
consensus_13356#2      GGTCGGACCCCAACCTTTCTGG-GGAGGATTCCGACTCATAATGGATCCTGTAATATCCA 897
consensus_13356#1      CCTTGTATACAAATGTCTATAGCAGAGGCGTTTGGTGCATAATCCAGAGTGTGTAGTAGG 1297
consensus_13356#3      CAACTAGG--AAAACTGTACAA-AGTTCAGTTTGTGCCTTTGTGGCATAGATACGCACAT 90
                                  **  * *      *     *  *   * *  *        *        

consensus_13356#0      GATCAAACTGG-GAAGAGAAAAAATTGTGGAG-ATCATTTCTAGCCTTGTGTGAGATTAG 1888
consensus_13356#2      GATCAAACTGG-GAAGAGAAAAAATTGTGGAG-ATCATTTCTAGCCTTGTGTGAGATTAG 955
consensus_13356#1      TGTTGGACAGATGAAGTTGAGTGGTACTGTAGTGTTGTTGTTCTCTTCCCTTGGGTTTTG 1357
consensus_13356#3      GATCCTTCAGTACAAGATGCAAAACA-TGCAG----ATTATCAGTGCAAGATGCAAATAG 145
                         *    * *   ***           ** **     **            **    * *

consensus_13356#0      CCTC--ATGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACCAAAAG-GTT 1945
consensus_13356#2      CCTC--ATGTTGTAGGACAATTAAAGTGACCGTGCATGGTTTGTTTGTACCAAAAG-GTT 1012
consensus_13356#1      TCTGTAACGTCGAGAGGGAGAGATGTTGACGCTGGCTGAAAGCACAACACAAGCAGAGTG 1417
consensus_13356#3      ATA---ACCTTGAGCAGTAATTGCACGAACTATTATTATTGTTCTCGGAAGTACAAAACC 202
                             *  * *      *         **  *   *           *     *     

consensus_13356#0      TTGTACTTCTGAGAACAATAATAATAGTTCGTGCA---------- 1980
consensus_13356#2      TTGTACTTCTGAGAACAATAATAATAGTTCGTGCAATTACTGCTC 1057
consensus_13356#1      ATATTATACTACTACTAGTAATT-TACTTATTAAAAA-------- 1453
consensus_13356#3      TTTTAGTACAAACCCCCTTGTCTCGTCCTCT-------------- 233
                        * *  * *         *         *                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)