cluster # 1337

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Oryza sativa
cluster # 1337 cluster # 1337 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1337#0 length = 743 sequences # 2

consensusID : consensus_1337#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 743
fasta sequence

                              [CATGGATGAAGGAGTAGAAAAGTACTCAAGCCGGAGGCAGCACACTGCAACTTAAGTTTTTCTATAGCTCCTAGCAAGCTAGCAATGGCTCCCTCGGTGATGGCTTCGTCGGCCACCTCCGTGGCTCCCTTCCAGGGGCTCAAGTCCACTGCGGGCCTCCCGGTGAACCGCCGCTCCAGCAGCTCGAGCTTTGGCAGCGTCAGCAACGGTGGAAGGATCAGCTGTATGCAGGTGTGGCCGATTGAAGGCATCAAGAAGTTTGAGACCCTGTCGTACCTGCCACCGCTCACGGTCGAGGACCTCTTGAAGCAGATCGAGTACCTGCTCCGGTCCAAATGGGCGCCTTGCCTCGAGTTTAGTAAGGGTCGGGTTCGTCTACCGTGAGAACCACAGGTCTCCTGGGTACTATGATGGCAGGTACTGGACCATGTGGAAGCTGCCTATGTTCGGATGCACTGATGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGATGCATTTGTTCGCATCATCGGCTTCGGCAACGTCAGGCAGGGGCAGTTGATTAGGTTTATCGCCTTCAAGCCCCCGGGTTGGGAGGAGTCCGGCGCAAACTAAGATAGTTGGCAAGCCAGCAAGATCAATCTTGAGCTTTATACAAAGGAAACTCGATTGATATATTCGGTTTTGGCAGCTTTGAACGTTAGAATTGGGCCCCCTCGCCTTGGTTTCCCCTTTCCCAGTTTGA]

[+] EMBL CF302640             [CATGGATGAAGGAGTAGAAAAGTACTCAAGCCGGAGGCAGCACACTGCAACTTAAGTTTTTCTATAGCTCCTAGCAAGCTAGCAATGGCTCCCTCGGTGATGGCTTCGTCGGCCACCTCCGTGGCTCCCTTCCAGGGGCTCAAGTCCACTGCGGGCCTCCCGGTGAACCGCCGCTCCAGCAGCTCGAGCTTTGGCAGCGTCAGCAACGGTGGAAGGATCAGCTGTATGCAGGTGTGGCCGATTGAAGGCATCAAGAAGTTTGAGACCCTGTCGTACCTGCCACCGCTCACGGTCGAGGACCTCTTGAAGCAGATCGAGTACCTGCTCCGGTCCAAATGGGCGCCTTGCCTCGAGTTTAGTAAGGGTCGGGTTCGTCTACCGTGAGAACCACAGGTCTCCTGGGTACTATGATGGCAGGTACTGGACCATGTGGAAGCTGCCTATGTTCGGATGCACTGATGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGATGCATTTGTTCGCATCATCGGCTTC                                                                                                                                                                                                                ]
[-] EMBL CF299157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGATGCATTTGTTTGCATCATCGGCTTCGGCAACGTCAGGCAGGGGCAGTTGATTAGGTTTATCGCCTTCAAGCCCCCGGGTTGGGAGGAGTCCGGCGCAAACTAAGATAGTTGGCAAGCCAGCAAGATCAATCTTGAGCTTTATACAAAGGAAACTCGATTGATATATTCGGTTTTGGCAGCTTTGAACGTTAGAATTGGGCCCCCTCGCCTTGGTTTCCCCTTTCCCAGTTTGA]




>consensus_1337#0
CATGGATGAAGGAGTAGAAAAGTACTCAAGCCGGAGGCAGCACACTGCAACTTAAGTTTT
TCTATAGCTCCTAGCAAGCTAGCAATGGCTCCCTCGGTGATGGCTTCGTCGGCCACCTCC
GTGGCTCCCTTCCAGGGGCTCAAGTCCACTGCGGGCCTCCCGGTGAACCGCCGCTCCAGC
AGCTCGAGCTTTGGCAGCGTCAGCAACGGTGGAAGGATCAGCTGTATGCAGGTGTGGCCG
ATTGAAGGCATCAAGAAGTTTGAGACCCTGTCGTACCTGCCACCGCTCACGGTCGAGGAC
CTCTTGAAGCAGATCGAGTACCTGCTCCGGTCCAAATGGGCGCCTTGCCTCGAGTTTAGT
AAGGGTCGGGTTCGTCTACCGTGAGAACCACAGGTCTCCTGGGTACTATGATGGCAGGTA
CTGGACCATGTGGAAGCTGCCTATGTTCGGATGCACTGATGCCACCCAGGTGCTCAAGGA
GCTCGAGGAGGCCAAGAAGGCATATCCAGATGCATTTGTTCGCATCATCGGCTTCGGCAA
CGTCAGGCAGGGGCAGTTGATTAGGTTTATCGCCTTCAAGCCCCCGGGTTGGGAGGAGTC
CGGCGCAAACTAAGATAGTTGGCAAGCCAGCAAGATCAATCTTGAGCTTTATACAAAGGA
AACTCGATTGATATATTCGGTTTTGGCAGCTTTGAACGTTAGAATTGGGCCCCCTCGCCT
TGGTTTCCCCTTTCCCAGTTTGA

clustalw multiple alignements is not computed in this case