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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1338 cluster # 1338       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1338#0 length = 663 sequences # 2  

consensusID : consensus_1338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 663
fasta sequence
                              [TCCGATTCCCGGGTCGACCCACGCGGTCCGCCCACGCGTCCGCGGACGCGTGGGCTACTCCGTTCCAAGTGGGTGCCCTGTCTCGAGTTCAGCAAGGTCGGATTTGTCTACCGTGAGAACCACAGGTCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTTGGATGCACCGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTCGTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTGTTCCCAGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGATGGGTGAGGCATATGTGAATGAAATCTATGCCAAGCTCCGG-CTATATATATTTAAAAAAAAAATACGAGATGGATGTGAATCCTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTGACGTAGC]

[+] EMBL BM419075             [TCCGATTCCCGGGTCGACCCACGCGGTCCGCCCACGCGTCCGCGGACGCGTGGGCTACTCCGTTCCAAGTGGGTGCCCTGTCTCGAGTTCAGCAAGGTCGGATTTGTCTACCGTGAGAACCACAGGTCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTTGGATGCACCGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTCGTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTGTTCCCAGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGATGGGTGAGGCATATGTGAATGAAATCTATGCCAAGCTCCGG CTATATATATTTAAAAAAAAAA                                                               ]
[-] EMBL CF293931             [                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTTCCCAGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGTTGGGTGAGGCATATGTGAATGAAATATATG GAAGCTCCGGCCTATATATATTTATACAAAGGGTACGAGATGGATGTGAATCCTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTGACGTAGC]


>consensus_1338#0 TCCGATTCCCGGGTCGACCCACGCGGTCCGCCCACGCGTCCGCGGACGCGTGGGCTACTC CGTTCCAAGTGGGTGCCCTGTCTCGAGTTCAGCAAGGTCGGATTTGTCTACCGTGAGAAC CACAGGTCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTT GGATGCACCGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCT GATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTC ATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATA TATAGCCTCGTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTG TTCCCAGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTT CACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGATGG GTGAGGCATATGTGAATGAAATCTATGCCAAGCTCCGGCTATATATATTTAAAAAAAAAA TACGAGATGGATGTGAATCCTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTGACGT AGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)