Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13395 cluster # 13395       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13395#0 length = 1714 sequences # 3  
consensus_13395#1 length = 1664 sequences # 7  
consensus_13395#2 length = 834 sequences # 2  
consensus_13395#3 length = 675 sequences # 1  

consensusID : consensus_13395#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1714
fasta sequence
                              [CAATTCTGATCGTTTTATCTTTTCTTCATACCTCATGTTTTTATTCTCAAGTTAGATTGGATCTGTTTAATGTTAGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGAGTGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAAATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTCACGTGGTTCACCTATTTATCCTTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGCTTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACCGATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCAGGGAATGTTGTCACCCTACAGATCTAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAACTTTCTTGTTTTCAGCCTGCTTTGCACTGCGGTGTTGTTTCATTTCAAATGTGCATTCATGTCAGGTTGCAAGGTACTGTGGCCTGTGGACGAACTCAATCTGATGATCATCCTTTTTATCTGCATTACATGTTGTATAATTGCATGGATTAGTTGAGAGCTCTATTCCGGAGGTGTATCTTAGCATGGTGAAGTTAAAATGGACAACAAAAGGCGGTGCAGTGCAACTGAGTCTGGCCGTCACGTCACAATCATTGTTTTCTGTTCACAAGTAAAAACATGCAGCTTCCTTCCAACGACCAAAATTAATGCTGGCATGATAAGGTGCCGAACCTGGTCCAACCAAGTTTCTCGTGGTAAAGCATGCGTAAGCACCTGCCTACTTCAGGTCAAAAGTTCAAAACTACAGGTTGTAAAATCTCTCTGAGGTGACCGATCTACGTAGATACTC]

[+] EMBL AK112102             [CAATTCTGATCGTTTTATCTTTTCTTCATACCTCATGTTTTTATTCTCAAGTTAGATTGGATCTGTTTAATGTTAGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGAGTGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAAATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTCACGTGGTTCACCTATTTATCCTTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGCTTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACCGATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCAGGGAATGTTGTCACCCTACAGATCTAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGATCGGCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAACTTTCTTGTTTTCAGCCTGCTTTGCACTGCGGTGTTGTTTCATTTCAAATGTGCATTCATGTCAGGTTGCAAGGTACTGTGGCCTGTGGACGAACTCAATCTGATGATCATCCTTTTTATCTGCATTACATGTTGTATAATTGCATGGATTAGTTGAGAGCTCTATTCCGGAGGTGTATCTTAGCATGGTGAAGTTAAAATGGACAACAAAAGGCGGTGCAGTGCAACTGAGTCTGGCCGTCACGTCACAATCATTGTTTTCTGTTCACAAGTAAAAACATGCAGCTTCCTTCCAACGACCAAAATTAATGCTGGCATGATAAGGTGCCGAACCTGGTCCAACCAAGTTTCTCGTGGTAAAGCATGCGTAAGCACCTGCCTACTTCAGGTCAAAAGTTCAAAACTACAGGTTGTAAAATCTCTCTGAGGTGACCGATCTACGTAGATACTC]
[-] EMBL CB654719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCCTCAAATTATGCACCGATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCAGGGAATGTTGTCACCCTACAGATCTAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGGTAATGCAGATCTTTGGGAAGCGAAATGACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM419947             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGCATTGCAGAGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGT CGGTGTGCAAGTTCCATCATCCCCGGGTGCGATC ATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCC ACGATGGCTCCTCC ATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCC AACC CCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAAaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_13395#0 CAATTCTGATCGTTTTATCTTTTCTTCATACCTCATGTTTTTATTCTCAAGTTAGATTGG ATCTGTTTAATGTTAGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGAT GGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATG CAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATT AGGATATCCACTCCGACCGAGTGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTG TAAATATGGGAATACATGTAAATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTC ACGTGGTTCACCTATTTATCCTTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATAC TGGAACAATGGCTAGCTGGGCTTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCA GAATCCCTCAAATTATGCACCGATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTG GAACTCATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCC AGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCAGGG AATGTTGTCACCCTACAGATCTAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGA GAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGA CTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCC AGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTT CTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGAT GGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCG GCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGT TGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGT GTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTA CCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTA AAACTTTCTTGTTTTCAGCCTGCTTTGCACTGCGGTGTTGTTTCATTTCAAATGTGCATT CATGTCAGGTTGCAAGGTACTGTGGCCTGTGGACGAACTCAATCTGATGATCATCCTTTT TATCTGCATTACATGTTGTATAATTGCATGGATTAGTTGAGAGCTCTATTCCGGAGGTGT ATCTTAGCATGGTGAAGTTAAAATGGACAACAAAAGGCGGTGCAGTGCAACTGAGTCTGG CCGTCACGTCACAATCATTGTTTTCTGTTCACAAGTAAAAACATGCAGCTTCCTTCCAAC GACCAAAATTAATGCTGGCATGATAAGGTGCCGAACCTGGTCCAACCAAGTTTCTCGTGG TAAAGCATGCGTAAGCACCTGCCTACTTCAGGTCAAAAGTTCAAAACTACAGGTTGTAAA ATCTCTCTGAGGTGACCGATCTACGTAGATACTC



consensusID : consensus_13395#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1664
fasta sequence
                              [CTCACCGCCGCGCCACCGATCACCCGCCCCCCACCTCCACCGCCGCCGCCACCGCCCGTCGCCGGAGCTCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGGCCCGCGCCGCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGTGACGGTGACGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCCCCCTCCCTCGCAGCTCCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTCTATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCAACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGGATTGTGCAGGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGAGTGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAAATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTCACGTGGTTCACCTATTTATCCTTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGCTTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACCGATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCA-GGGAATGTTGTCACCCTAC-AGATCTAGTTCATATCCTGTACCTCAATAC-GCATTGCAG-AGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAAAAAAAAAAAAAAAA]

[+] EMBL AK098948             [CTCACCGCCGCGCCACCGATCACCCGCCCCCCACCTCCACCGCCGCCGCCACCGCCCGTCGCCGGAGCTCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGGCCCGCGCCGCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGTGACGGTGACGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCCCCCTCCCTCGCAGCTCCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTCTATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCAACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGGATTGTGCAGGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGAGTGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAAATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTCACGTGGTTCACCTATTTATCCTTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGCTTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACCGATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCA GGGAATGTTGTCACCCTAC AGATCTAGTTCATATCCTGTACCTCAATAC GCATTGCAG AGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCT                           ]
[+] EMBL CB636113             [                           CCCCCACCTCCACCGCCGCCGCCACCGCCCGTCGCCGGAGCTCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGGCCCGCGCCGCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGTGACGGTGACGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCCCCCTCCCTCGCAGCTCCCCGCCACCCCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTCTATGGAGAGGGTATGTGGCANCACATGACCATGAGCGGCACTGGCGCTATGCAACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK111958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCTTCACGTGGTTCACCTATTTATCCTTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGCTTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACCGATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCA GGGAATGTTGTCACCCTAC AGATCTAGTTCATATCCTGTACCTCAATAC GCATTGCAG AGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTCTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCT                           ]
[-] EMBL CB681168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATATACTGGCCAAATGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCA GGGAATGTTGTCACCCTAC AGATCTAGTTCATATCCTGTACCTCAATAC GCATTGCAG AGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTTTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTTTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTATGTGTTAATGCAGATCTTTGGGA                     ]
[+] EMBL AA754551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGAGTCNAANGCAGTCTTTNGGGGCTCAACAAACCTATGGAACTTCTCAGCAAGTTGACNCCANTGCAGGNAATCA GGGAATGTTGTCACCCTAC AGATCTAGTTCATATCCTGTACCTCAATAC GCNTTGCAG AAAGAGAATGTNTTTCCTGAGANACCTGATCNACCAGAATGTCNATNCTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACNACGTCCGGGANATTATNTGTGCAAGTTCTATTCTCGCNATGGCATCTGCAANTTCGGNGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGNTCTGCTTCAACTAATGTTCCT                                                                                                                                                                                                                                                             ]
[-] EMBL CA763130             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cgcCAGTCCCCAGGGGGTCAACAAACCTATGGACCTTCTCAGCACGTTGATGCCAGTGCAGGCAATCAGGGGAATGTTGTCACCCCACAAGATATAGTTCATATCCTGTGCCCCAATACGGCA TGCAGAAGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATTCTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCCCTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATCGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTTGGCGTTTCCTGCAATCCCCATCCGCATCCGGGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCCCCGTGATGTACAAAAAAGTCCATCGCACGCCCGTTTCAGGCGCTGTGTGAATGTTGCCCCCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAAAAAAAAAAAAAAAA]
[+] EMBL CA882889             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  C GCATTGCAG AGAGAGAATGTATTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTT                                                                                                                                                                                                                                                                           ]


>consensus_13395#1 CTCACCGCCGCGCCACCGATCACCCGCCCCCCACCTCCACCGCCGCCGCCACCGCCCGTC GCCGGAGCTCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGG CCCGCGCCGCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGT GACGGTGACGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCC CCCTCCCTCGCAGCTCCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGC CGCTCTCTATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCA ACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGG ATTGTGCAGGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTAT TGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTA TTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGA AAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGAG TGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAA ATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTCACGTGGTTCACCTATTTATCC TTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGC TTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACC GATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCAAAT GATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATGG AACTTCTCAGCAAGTTGATGCCAGTGCAGGCAATCAGGGAATGTTGTCACCCTACAGATC TAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGAGAATGTATTTCCTGAGAGACC TGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTG CAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGT GGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATCTG CAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTCCTCCAATGGGAGTGTA TGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTCTCCTGCAATCCCCATC CGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGAT GTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAATGTTGCCACCCCCTCC TAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTT TTTGTTAATGCAGATCTTTGGGAAGCGAAAAAAAAAAAAAAAAA



consensusID : consensus_13395#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 834
fasta sequence
                              [ATCACCCCCTTACGACCTCCACCGCCGCCGCCACCGCCCGTCGCCGGAGCTCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGGCCCGCGCCGCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGTGACGGTGACGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCCCCCTCCCTCGCAGCTCCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTCTATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCAACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGGATTGTGCAGGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGGTTTGTAGTTTATTGCTGCAGCACATCATCTGCCCTT-CTTTTTATAGTTTCTTCTCTTTGATGTACTGAAGTGAAGTCTGTTTGCTTCTGTAGATTGTAGGGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAAATTTCACCATCCTTTAAAGGTCAATGCTATGGCTTCTTC]

[+] EMBL CB648932             [ATCACCCCCTTACGACCTCCACCGCCGCCGCCACCGCCCGTCGCCGGAGCTCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGGCCCGCGCCGCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGTGACGGTGACGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCCCCCTCCCTCGCAGCTCCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTCTATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCAACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGGATTGTGCAGGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGGTTTGTAGTTTATTGCTGCAGCACATCATCTGCCCTT CTTTTTATAGTTTCTTCTCT                                                                                                                                         ]
[-] EMBL CB648933             [                                                                                                                                                                                                                                             CCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTTTATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCAACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGGATTGTGCAGGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTATTGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGGTTTGTAGTTTATTGCTGCAGCACATCATCTGCCCTTCCTTTTTATAGTTTCTTCTCTTTGATGTACTGAAGTGAAGTCTGTTTGCTTCTGTAGATTGTAGGGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAAATTTCACCATCCTTTAAAGGTCAATGCTATGGCTTCTTC]


>consensus_13395#2 ATCACCCCCTTACGACCTCCACCGCCGCCGCCACCGCCCGTCGCCGGAGCTCCGAGGATG GCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGGCCCGCGCCGCAGCTCGCC GCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGTGACGGTGACGGCCTCCGC CGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCCCCCTCCCTCGCAGCTCCC CGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTCTATGGAGAGGG TATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCAACCTGGACCATATCCTGA GCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGGATTGTGCAGGTTCGGTAT GAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTATTGCCTCTGCCAGAATGAA AGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATCTGAAGACTGGAAC ATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAGCTGGAATTGCAGG GAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGGTTTGTAGTTTATTGCTGCA GCACATCATCTGCCCTTCTTTTTATAGTTTCTTCTCTTTGATGTACTGAAGTGAAGTCTG TTTGCTTCTGTAGATTGTAGGGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATA TGGGAATACATGTAAATTTCACCATCCTTTAAAGGTCAATGCTATGGCTTCTTC



consensusID : consensus_13395#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence
                              [CGGTATCGATCAGCTTGTTTAGGTGAGCCAGAGGCCGAGACAAGGGGCAATCAGGGAATGTTGTCCCCCTACAGATCTAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGAGAATGTATTCCCTGAGAGACCTGATCAACCAGAACGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATTTGCAAGTTCGGCGCGAATTGCAAATTTGCCCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTGGGCGTTTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTTTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763139             [CGGTATCGATCAGCTTGTTTAGGTGAGCCAGAGGCCGAGACAAGGGGCAATCAGGGAATGTTGTCCCCCTACAGATCTAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGAGAATGTATTCCCTGAGAGACCTGATCAACCAGAACGTCAATACTACATGAAGACTGGAGACTGTAAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATTGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATTCTCGCTATGGCATTTGCAAGTTCGGCGCGAATTGCAAATTTGCCCATCCAACGATGGCTCCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTGGGCGTTTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTTTCAGGCGCTGTGTGAATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGAGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAAAAAAAAAAAAAAAAAA]


>consensus_13395#3 CGGTATCGATCAGCTTGTTTAGGTGAGCCAGAGGCCGAGACAAGGGGCAATCAGGGAATG TTGTCCCCCTACAGATCTAGTTCATATCCTGTACCTCAATACGCATTGCAGAGAGAGAAT GTATTCCCTGAGAGACCTGATCAACCAGAACGTCAATACTACATGAAGACTGGAGACTGT AAATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGAT TGTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTAT TCTCGCTATGGCATTTGCAAGTTCGGCGCGAATTGCAAATTTGCCCATCCAACGATGGCT CCTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTGGGCGT TTCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTG ACCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTTTCAGGCGCTGTGTGA ATGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGG AGATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAAA AAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13395#0      ------------------------------------------------------------
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      CTCACCGCCGCGCCACCGATCACCCGCCCCCCACCTCCACCGCCGCCGCCACCGCCCGTC 60
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ------------------------------------------------------------
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      GCCGGAGCTCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGG 120
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ------------------------------------------------------------
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      CCCGCGCCGCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGT 180
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ------------------------------------------------------------
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      GACGGTGACGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCC 240
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ------------------------------------------------------------
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      CCCTCCCTCGCAGCTCCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGC 300
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ------------------------------------------------------------
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      CGCTCTCTATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCA 360
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ------------------------------------CAATTCTGATCGTTTTATCTTTTC 24
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ACCTGGACCATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGG 420
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      TTCATACCTCATGTTTTTATTCTCAAGTTAGATTGGATCT---GTTTAATGTTAGGCTAT 81
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ATTGTGCAGGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTAT 480
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      TGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTA 141
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      TGCCTCTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTA 540
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      TTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGA 201
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      TTATCTGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGA 600
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      AAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGAG 261
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      AAAAGCTGGAATTGCAGGGAGGGTGCAGCTAAACACATTAGGATATCCACTCCGACCGAG 660
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      TGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAA 321
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      TGAAAAGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAATACATGTAA 720
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTCACGTGGTTCACCTATTTATCC 381
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ATTTCACCATCCAGAACTTTTCAATGCTATGGCTTCTTCACGTGGTTCACCTATTTATCC 780
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      TTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGC 441
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      TTCTGTACATTCCTCTGCAACCGCGGGTCCACCTTATACTGGAACAATGGCTAGCTGGGC 840
consensus_13395#2      -----ATCACCCCCTTACGACC-----TCCACCGCCGCCGCCACCGCCCGTCGCCGGAGC 50
                                                                                   

consensus_13395#0      TTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACC 501
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      TTTTCCAAGAGGTTCTTTTATTCCAAGCCCTAGATGGCAGAATCCCTCAAATTATGCACC 900
consensus_13395#2      TCCGAGGATGGCATCCCGCGTCGCCGCCGCCGCCGCGGCGATCGCGTGATGGCCCGCGCC 110
                                                                                   

consensus_13395#0      GATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCA-AA 560
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      GATGATTGTACCGCAAGGTCTTGTTCAAGTACCAAGCTGGAACTCATATACTGGCCA-AA 959
consensus_13395#2      GCAGCTCGCCGCCGATGGACGACGCCGGAAGGGCCTCCGCTCCAGCGGTGGTGACGGTGA 170
                                                                                   

consensus_13395#0      TGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATG 620
consensus_13395#3      -----------------------------------------CGGTATCGATCAGCTTGTT 19
consensus_13395#1      TGATGCCTGTTTCATCTTCTGAGAGTCGACTGCAGTCCCCAGGGGCTCAACAAACCTATG 1019
consensus_13395#2      CGGCCTCCGCCGCCGCCCCCACGCCTCCTCTTCCTCCTCCTCCGCCTCCCCCCCCTCCCT 230
                                                                  *  **      *     

consensus_13395#0      GA-ACTTCTCAGCAA--GTTGATGCCA-GTGCAGGCAATCAGGGAATGTTGTCACCCTAC 676
consensus_13395#3      TA-GGTGAGCCAGAG--GCCGAGACAA-G---GGGCAATCAGGGAATGTTGTCCCCCTAC 72
consensus_13395#1      GA-ACTTCTCAGCAA--GTTGATGCCA-GTGCAGGCAATCAGGGAATGTTGTCACCCTAC 1075
consensus_13395#2      CGCAGCTCCCCGCCACCGCCGCCGCCACGGACGAGCCTTCCCACGACCCCGCCGCTCTCT 290
                                *       *  *   * * *     **  **     *    * * * **  

consensus_13395#0      AGATCTAGTTCATATC-CTGTACCTCAATACGCATTGCAGAGAGAGAATGTA-------- 727
consensus_13395#3      AGATCTAGTTCATATC-CTGTACCTCAATACGCATTGCAGAGAGAGAATGTA-------- 123
consensus_13395#1      AGATCTAGTTCATATC-CTGTACCTCAATACGCATTGCAGAGAGAGAATGTA-------- 1126
consensus_13395#2      ATGGAGAGGGTATGTGGCAGCAGATGACCATGAGCGGCAGTGGCGCTATGCAACCTGGAC 350
                       *     **   ** *  * * *  * *  * *    **** *     *** *        

consensus_13395#0      --TTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTA 785
consensus_13395#3      --TTCCCTGAGAGACCTGATCAACCAGAACGTCAATACTACATGAAGACTGGAGACTGTA 181
consensus_13395#1      --TTTCCTGAGAGACCTGATCAACCAGAATGTCAATACTACATGAAGACTGGAGACTGTA 1184
consensus_13395#2      CATATCCTGAGCGGTCCGGAGAACCGGACTGCACTTACTACCTCAGGACTGGATTGTGCA 410
                         *  ****** *  * *   **** **  *    ****** * * *******   ** *

consensus_13395#0      AATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATT 845
consensus_13395#3      AATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATT 241
consensus_13395#1      AATTTGGTGCGGTGTGCAAGTTCCATCATCCCCGGGTGCGATCAATGCCTACTCCAGATT 1244
consensus_13395#2      GGTTCGGTATGAGCTGCAGGTTCAATCATCCTCAGGATAGGAATCTGGCTATT---GCCT 467
                         ** ***  *   **** **** ******* * **   *     ** *** *   *  *

consensus_13395#0      GTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATT 905
consensus_13395#3      GTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATT 301
consensus_13395#1      GTGTCTTGAGTCCAGTGGGTCTTCCACTACGTCCGGGAGAAGAACTGTGCAAGTTCTATT 1304
consensus_13395#2      CTGCCAGAATGAAAGGAGAATACCCTGAGAGGATGGGGCAACCAGAATGTCAGTATTATC 527
                        ** *   *    **  *     **     *   ***  **  *   **  ***  *** 

consensus_13395#0      CTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTC 965
consensus_13395#3      CTCGCTATGGCATTTGCAAGTTCGGCGCGAATTGCAAATTTGCCCATCCAACGATGGCTC 361
consensus_13395#1      CTCGCTATGGCATCTGCAAGTTCGGCGCGAATTGCAAATTTGACCATCCAACGATGGCTC 1364
consensus_13395#2      TGAAGACTGGAACATGCAAGTTTGGGCCTACATGCAAATTCCATCATCCCAGAGAAAAAG 587
                              *** *  ******** **  * *  ********    ***** *         

consensus_13395#0      CTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTC 1025
consensus_13395#3      CTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTGGGCGTT 421
consensus_13395#1      CTCCAATGGGAGTGTATGCCTACGGCTCTGCTTCAACTAATGTACCTATGGTTCGGCGTC 1424
consensus_13395#2      CTGGAATTGCAGGGAGGG--TGCAGCTAAACAC--ATTAGGATATCCAC--TCCGAC-CG 640
                       **  *** * ** *   *  * * ***   *    * **   ** * *   *  * *   

consensus_13395#0      TCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGA 1085
consensus_13395#3      TCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGA 481
consensus_13395#1      TCCTGCAATCCCCATCCGCATCCGCGTACACTTCCTAAGGCGGCGTCCTGGCAGTTGTGA 1484
consensus_13395#2      GTTTGTAGTTTATTGCTGCA-------GCACATCATCTGCCCTTCTTTTTATAGTTTCTT 693
                          ** * *      * ***        *** ** *  * *    *  *   ****    

consensus_13395#0      CCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAA 1145
consensus_13395#3      CCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTTTCAGGCGCTGTGTGAA 541
consensus_13395#1      CCCAAACCACCGTGATGTATAAAAAAGTCCATCGCACGCCCGTCTCAGGCGCTGTGTGAA 1544
consensus_13395#2      CTC-------TTTGATGTACTGAAGTG--------AAGTCTGTTT---GC-TTCTGTAGA 734
                       * *         *******   **  *        * * * ** *   **  * ***  *

consensus_13395#0      TGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGA 1205
consensus_13395#3      TGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGA 601
consensus_13395#1      TGTTGCCACCCCCTCCTAACTCCCCGGAATCAAAGTTCTGTAAATTGAGTTGCTACCGGA 1604
consensus_13395#2      TTGTAGGGGAGTGTGCATATTACTTAAAAACAGGACAGTGTAAATATGGGAAT------A 788
                       *  *         * *  * * *    ** **      *******   *          *

consensus_13395#0      GATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAACT 1265
consensus_13395#3      GATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAATGACGTTTAAAAAA 661
consensus_13395#1      GATGTACAGTTTATTTTTTGTTAATGCAGATCTTTGGGAAGCGAAAAAAAAAAAAAAAAA 1664
consensus_13395#2      CATGTAAATTTCACCATCCTTTAA---AGGTC-------AATGCTATGGCTTCTTC---- 834
                        ***** * ** *   *   ****   ** **       *  *  *              

consensus_13395#0      TTCTTGTTTTCAGCCTGCTTTGCACTGCGGTGTTGTTTCATTTCAAATGTGCATTCATGT 1325
consensus_13395#3      AAAAAAAAAAAAAA---------------------------------------------- 675
consensus_13395#1      ------------------------------------------------------------
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      CAGGTTGCAAGGTACTGTGGCCTGTGGACGAACTCAATCTGATGATCATCCTTTTTATCT 1385
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ------------------------------------------------------------
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      GCATTACATGTTGTATAATTGCATGGATTAGTTGAGAGCTCTATTCCGGAGGTGTATCTT 1445
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ------------------------------------------------------------
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      AGCATGGTGAAGTTAAAATGGACAACAAAAGGCGGTGCAGTGCAACTGAGTCTGGCCGTC 1505
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ------------------------------------------------------------
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      ACGTCACAATCATTGTTTTCTGTTCACAAGTAAAAACATGCAGCTTCCTTCCAACGACCA 1565
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ------------------------------------------------------------
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      AAATTAATGCTGGCATGATAAGGTGCCGAACCTGGTCCAACCAAGTTTCTCGTGGTAAAG 1625
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ------------------------------------------------------------
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      CATGCGTAAGCACCTGCCTACTTCAGGTCAAAAGTTCAAAACTACAGGTTGTAAAATCTC 1685
consensus_13395#3      ------------------------------------------------------------
consensus_13395#1      ------------------------------------------------------------
consensus_13395#2      ------------------------------------------------------------
                                                                                   

consensus_13395#0      TCTGAGGTGACCGATCTACGTAGATACTC 1714
consensus_13395#3      -----------------------------
consensus_13395#1      -----------------------------
consensus_13395#2      -----------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)