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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13407#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1613 fasta sequence
[CGCCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG-TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC-TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA-GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT-CCCT-GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA-TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAAA]
[+] EMBL AK111942 [CGCCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCACATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGACCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTATGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCCCTGAATATACTGCAGCAATTGATGTGTGGTCTGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATCGGAACGCCAAATGAGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCA ]
[+] EMBL AK111691 [ CCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCACATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGACCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTATGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTGTTTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCTGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATCGGAACGCCAAATGAGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTC ]
[+] EMBL OSA535841 [ TCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCACATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGACCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTATGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCTGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATCGGAACGCCAAATGAGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTC ]
[+] EMBL CB617797 [ TGGAGACCATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCGCA ]
[+] EMBL CB617798 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTTCTGAA ]
[+] EMBL CB617835 [ TGGAGACCTTCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGC ]
[+] EMBL CB617768 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACAT ]
[+] EMBL CB617836 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAA ]
[+] EMBL CB617796 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTA ]
[-] EMBL CB966430 [ GTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGCCAGTCCTTTCCTGAAAAATTTCCGCATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCGC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTC ATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTCATGTGGGATTTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCAGCGGTTATCATCAAATTTCCCATTTTCTTGTCgat ]
[+] EMBL BM421147 [ CTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCTCCCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTCCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAA ]
[+] EMBL BM419547 [ GGCATCACGTGCATGACATAAGTGATGACCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGACNCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGCCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCTGGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAAA]
consensusID : consensus_13407#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence
[GCCTGATTAGGCCGAGACAAGGGGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGATTTTTTTCCATTTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTTTGCGGTTATCATCAAAAAAAAAAAAA]
[-] EMBL CA760368 [GCCTGATTAGGCCGAGACAAGGGGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGATTTTTTTCCATTTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTTTGCGGTTATCATCAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13407#0 CGCCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCC 60
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 GAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGG 120
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 CGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGAT 180
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 GGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGG 240
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 GAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGC 300
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 CTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAA 360
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 GATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCT 420
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 GCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACA 480
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 AAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCA 540
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 AATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGAT 600
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 TCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAG 660
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 CAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTAC 720
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 CACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGA 780
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 ACTTCTGTTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTAT 840
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 TTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATT 900
consensus_13407#1 ------------------------------------------------------------
consensus_13407#0 ACGTCTACTAATGGAGCTCATTGGAACGCCA-AATGAAGCTGATCTGGATTTTGTAAATG 959
consensus_13407#1 --------------GCCTGATTAGGCCGAGACAAGGGGGCTGATCTGGATTTTGTAAATG 46
** *** * ** * ** * **********************
consensus_13407#0 AAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAA 1019
consensus_13407#1 AAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAA 106
************************************************************
consensus_13407#0 AATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATC 1079
consensus_13407#1 AATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATC 166
************************************************************
consensus_13407#0 CTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATG 1139
consensus_13407#1 CTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATG 226
************************************************************
consensus_13407#0 ACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCAT 1199
consensus_13407#1 ACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCAT 286
************************************************************
consensus_13407#0 TGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATT 1259
consensus_13407#1 TGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATT 346
************************************************************
consensus_13407#0 ACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCC 1319
consensus_13407#1 ACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCC 406
************************************************************
consensus_13407#0 TCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGA 1379
consensus_13407#1 TCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGA 466
************************************************************
consensus_13407#0 AAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGA 1439
consensus_13407#1 AAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGA 526
************************************************************
consensus_13407#0 TCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA 1499
consensus_13407#1 TCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA 586
************************************************************
consensus_13407#0 TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGAT 1559
consensus_13407#1 TTTTTTTCCATTTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGAT 646
*********** ************************************************
consensus_13407#0 GACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAAA 1613
consensus_13407#1 GACGGCCTAAATTTTGCGGTTATCATCAAA--------------AAAAAAAAAA 686
************* **************** *******
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||