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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1341 cluster # 1341       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1341#0 length = 608 sequences # 2  

consensusID : consensus_1341#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 608
fasta sequence
                              [CGCGACAGCTTCGGACCAGTCCGCCGCACCCACGGTTCGGCCGGACCCCCGACCCAACGCCTCAGACCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTCCGACTTCCTGGCTACATTGTTCCATTGCCCAGAGGCTGTTCA-CTTGGGAGACCTGATCGTTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGCCGCTGGACCACTACCTCCGGCTGAACCGTTTCCAGGGTT-GCGGCCGTTAAGCAAGAAAAGATAACTCTTCCCGA-GCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTCCCGTTCACATGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCATTTG-AATATTGCTACTACCACC--AAG--A-TCTGCACCGACGCCGCTCCGCCCGGCTCGCGCCCCGGTTTTTCGCGC]

[+] EMBL BI799150             [CGCGACAGCTTCGGACCAGTCCGCCGCACCCACGGTTCGGCCGGACCCCCGACCCAACGCCTCAGACCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTCCGACTTCCTGGCTACATTGTTCCATTGCCCAGAGGCTGTTCA CTTGGGAGACCTGATCGTTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGCCGCTGGACCACTACCTCCGGCTGAACCGTTTCCAGGGTT GCGGCCGTTAAGCAAGAAAAGATAACTCTTCCCGA GCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTCCCGTTCACATGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCATTTG AATATTGCTACTACCACC  AAG  A TCTGCACCGACGCCGCTCCGCCCGGCTCGCGCCCCGGTTTTTCGCGC]
[+] EMBL BI799176             [                                                                                                                                  tAGAAGAGGTTCACCCTTGGAGACCTGATCGTTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGCCGCTGGACC CTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGCCGTTAAGC AGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTCCCGTTCACAGGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCAATTGAAATATTGCTACTACCACCCAAAGGAATTCTGCACCGACGCCGCTCC CCCGGCTCGC CCCCGGT         ]


>consensus_1341#0 CGCGACAGCTTCGGACCAGTCCGCCGCACCCACGGTTCGGCCGGACCCCCGACCCAACGC CTCAGACCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTCCGACTTCCTGGCTACATTG TTCCATTGCCCAGAGGCTGTTCACTTGGGAGACCTGATCGTTTATGAGTACGACCGGGCG TGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCG ACGTGCGGTGCTCTTCCGCCGCTGGACCACTACCTCCGGCTGAACCGTTTCCAGGGTTGC GGCCGTTAAGCAAGAAAAGATAACTCTTCCCGAGCCCCCGCCGGCGTCTCCGGACTTCCT AACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGG GGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCA TGTGCAAGTCCCGTTCACATGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCATTTGA ATATTGCTACTACCACCAAGATCTGCACCGACGCCGCTCCGCCCGGCTCGCGCCCCGGTT TTTCGCGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)