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Oryza sativa
cluster # 13416 cluster # 13416       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13416#0 length = 1056 sequences # 11  
consensus_13416#1 length = 534 sequences # 1  
consensus_13416#2 length = 186 sequences # 1  

consensusID : consensus_13416#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1056
fasta sequence
                              [ACACACACTACGCTTCTACGCTACACACCACTACTCTCACAACAATGGCGAGGAGCGTAGCCGT-G-GTGGTGTTGCTGGCGATGGCGGCGGTGGCGGCGGCGCAGGCGCCGG-GTCCCGCTGCGACGCCGGCGGCGGGCGCCACGGGGCCGCCGAACGTGACGGCGGTCCTGGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGCCAGCTGAACAACTCCTTCAACGGCAACGGCTACACCGTGTTCGCGCCTACCGACAACGCCTTCAACAACCTCAAGCCGGGCACCCTCAACAGCCTGACGCAGCAGCAGCAGGTGGCGCTCGTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCAACCCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCACCACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGATTGGAGTTTTCTGTCTGAGGCCGGGATGTTAATAATGCATTAGTACATTTTGAGTCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK105603             [ACACACACTACGCTTCTACGCTACACACCACTACTCTCACAACAATGGCGAGGAGCGTAGCCGT G GTGGTGTTGCTGGCGATGGCGGCGGTGGCGGCGGCGCAGGCGCCGG GTCCCGCTGCGACGCCGGCGGCGGGCGCCACGGGGCCGCCGAACGTGACGGCGGTCCTGGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGCCAGCTGAACAACTCCTTCAACGGCAACGGCTACACCGTGTTCGCGCCTACCGACAACGCCTTCAACAACCTCAAGCCGGGCACCCTCAACAGCCTGACGCAGCAGCAGCAGGTGGCGCTCGTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCAACCCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCACCACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGATTGGAGTTTTCTGTCTGAGGCCGGGATGTTAATAATGCATTAGTAC                                   ]
[+] EMBL OSR18301A            [              TCTACGCTACACACCACTACTCTCACAACAATGGCGAGGAGCGTAG CGT G GTGGTGTTGCTGGCGATGGCGGCGGTGGNGGCGGCGCAGGCGCCGG GTCCCGCTGCGACGCCGGCGGCGGGCGCCACGGGGCCGCCGAACGTAACGGCGGTCCTGGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGCCAGCTGAACAACTCCTTCAACGGCAACGGCTACACCGTGTTCGCGNCTACCGACAACGNCTTCAACAACCTCAAGCCGGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB651155             [                   GCTACACACCACTACTCTCACAACAATGGCGAGGAGCGTAGCCGT G GTGGTGTTGCTGGCGATGGCGGCGGTGGCGGCGGCGCAGGCGCCGG GTCCCGCTGCGACGCCGGCGGCGGGCGCCACGGGGCCGCCGAACGTGACGGCGGTCCTGGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGCCAGCTGAACAACTCCTTCAACGGCAACGGCTACACCGTGTTCGCGCCTACCGACAACGCCTTCAACAACCTCAAGCCGGGCACCCTCAACAGCCTGACGCAGCAGCAGCAGGTGGCGCTCGTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCAACCCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCACCACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCG                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSS13806A            [                                              GGCGAGGAGCGTANCNGT GNGTGGTGTTGCTGGCGATGGCGGCGGTGGGGGCGGCGCAGGCGCCGGNGTCCCGCTGCNACGCCGGCGG GGGCNCCACGGGGCCGCCGAACNTAACGGCGGTCCTGGAGAAGGGAGGGCAGTACACGANGTTNATCCGGNTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGCCAGCTGAACAANTCCTTCAACGGCAACGGCTACACCNTTTTCGCGGCTACCGACAACGCCTTCAACAACCTCAAGCCGGGCACCCTCAACAGCNTGAGGCAGCAGCAGCAGGTGGCGCTCGTCCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSS14468A            [                                                CGAGGAGCGTAGCTGTNG GTGGTGTTGCTGGCGATGGCGGCGGTGGCGGCGGCGCAGGCGCGGT GTCCCGCTGCGACGCCGGCGG GGGCGCCACGGGGCCGCCGAACGTGACGGCGGTCCTGGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGCCAGCTGAACAACTCCTTCAACGGCAACGGCTACACCGTGTTCGCGCCTACCGACAACGCCTTCAACAACCTCAAGCCGGGCA CCTCAACAG CTGACGCAGCAGCAGCAGGTGGCGCTCGTNCAGGGCCACGT CTCCCGNAGTTCTACTTCATGGACTCCTTCCAGACGGCCAG AACCNCGTCCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB651156             [                                                                                                                                                                                                                                                                                                    TACCGACAACGCTTTCAACAACCTCAAGCCGGGCACCCTCAACAGCCTGACGCAGCAGCAGCAGGTGGCGCTCGTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCAACCCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCACCACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTGGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGATTGGAGTTTTCTGTCTGAGGCCGGGATGTTAATAATGCATTAGTACATTTTGAGT                          ]
[+] EMBL CB632527             [                                                                                                                                                                                                                                                                                                                                                            AGCAGCAGGTGGCGCTCGTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCAACCCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCACCACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGAT                                                                                ]
[-] EMBL CB632528             [                                                                                                                                                                                                                                                                                                                                                             GCAGCAGGTGGCGCTCGTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCAACCCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCACCACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGATTGGAGTTTTC                                                                      ]
[+] EMBL AU197943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGATTGGAGTTTTCTGTCTGAGGCCGGGATGTTAATAATGCATTAGTACATTTTGAGTCAAAAAAAAAAAAA            ]
[+] EMBL AU173238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCNCGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAANACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTC TTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGATTGGAGTTTTCTGTNTGAGGCCGGGATGTTAATAATGCATTAGTACATTTTGAGTCAAAAAAAAAAAAAAA          ]
[+] EMBL AU184039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTGCCTCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTANCCATGNGCANGCAATTCTTTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATATTGGGCTGTGTGATTGGAGTTTTNTGTCTGAGGCCGGGATGTTAATAATGCATTAGTACATTTTGAGTCCAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13416#0 ACACACACTACGCTTCTACGCTACACACCACTACTCTCACAACAATGGCGAGGAGCGTAG CCGTGGTGGTGTTGCTGGCGATGGCGGCGGTGGCGGCGGCGCAGGCGCCGGGTCCCGCTG CGACGCCGGCGGCGGGCGCCACGGGGCCGCCGAACGTGACGGCGGTCCTGGAGAAGGGAG GGCAGTACACGACGTTCATCCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACA GCCAGCTGAACAACTCCTTCAACGGCAACGGCTACACCGTGTTCGCGCCTACCGACAACG CCTTCAACAACCTCAAGCCGGGCACCCTCAACAGCCTGACGCAGCAGCAGCAGGTGGCGC TCGTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCA ACCCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCA CCACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGC TCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGC TCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGG GTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCG CCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCC TCTTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCT TTTCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTA AATTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAA TATTGGGCTGTGTGATTGGAGTTTTCTGTCTGAGGCCGGGATGTTAATAATGCATTAGTA CATTTTGAGTCAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13416#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 534
fasta sequence
                              [AACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGCGCACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTTTCCTTTTTTTCCTCTTCCCTCACACACTCGGCCCAACCCGCCCCACACACAGTTAATAACAGACGCGTACCACTGGCCGTGTGCGCGTTCGCCTTGCCGCATCCAATGGACCTCCCTCCCCCCCCCGTGCGCCATAGCGCTCTACCACTCACACTCTCCGTACGTCACCTAA]

[+] EMBL CA754958             [AACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGCGCACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTTTTTCCTTTTTTTCCTCTTCCCTCACACACTCGGCCCAACCCGCCCCACACACAGTTAATAACAGACGCGTACCACTGGCCGTGTGCGCGTTCGCCTTGCCGCATCCAATGGACCTCCCTCCCCCCCCCGTGCGCCATAGCGCTCTACCACTCACACTCTCCGTACGTCACCTAA]


>consensus_13416#1 AACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCG CTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCC CCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCC GCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCC GTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGCGCA CGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTT TTTCCTTTTTTTCCTCTTCCCTCACACACTCGGCCCAACCCGCCCCACACACAGTTAATA ACAGACGCGTACCACTGGCCGTGTGCGCGTTCGCCTTGCCGCATCCAATGGACCTCCCTC CCCCCCCCGTGCGCCATAGCGCTCTACCACTCACACTCTCCGTACGTCACCTAA



consensusID : consensus_13416#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 186
fasta sequence
                              [GGCGAGGAGCGTAGCGTTGGTGGTGTTGCTGGCGATGGCGGCGGTGGNGGCGGCGCAGGCGCGGGTCCCGCTGCGACGCCGGCGGNGGCNCCACGGNGCCNCCGAACNTAACGGCNGTCCTNGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTNATNAAGGANACGCANCANGACACGCANC]

[+] EMBL OSS1313A             [GGCGAGGAGCGTAGCGTTGGTGGTGTTGCTGGCGATGGCGGCGGTGGNGGCGGCGCAGGCGCGGGTCCCGCTGCGACGCCGGCGGNGGCNCCACGGNGCCNCCGAACNTAACGGCNGTCCTNGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTNATNAAGGANACGCANCANGACACGCANC]


>consensus_13416#2 GGCGAGGAGCGTAGCGTTGGTGGTGTTGCTGGCGATGGCGGCGGTGGNGGCGGCGCAGGC GCGGGTCCCGCTGCGACGCCGGCGGNGGCNCCACGGNGCCNCCGAACNTAACGGCNGTCC TNGAGAAGGGAGGGCAGTACACGACGTTCATCCGGCTNATNAAGGANACGCANCANGACA CGCANC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13416#0      ------------------------------------------------------------
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      AACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTCAGCGCGGTCAAGCCG 60
                                                                                   

consensus_13416#0      -----------------------------------------------ACACACACTACGC 13
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      CTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTCTTCGGCGTCAAGGCC 120
                                                                                   

consensus_13416#0      TTCTACGCTACACACCACTACTCTCACAACAATGGCGAGGAGCGTAGCCGTGGTGGTGTT 73
consensus_13416#2      ---------------------------------GGCGAGGAGCGTAGCGTTGGTGGTGTT 27
consensus_13416#1      CCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGTGGCTCCACGGAGGCC 180
                                                          * ** ** ** **      *  *  

consensus_13416#0      GCTGGCGATGGCGGCGGTGGCGGCGGCGC--AGGCGCCGGGTCCCGCT-------GCGAC 124
consensus_13416#2      GCTGGCGATGGCGGCGGTGGNGGCGGCGC--AGGCGC-GGGTCCCGCT-------GCGAC 77
consensus_13416#1      GCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCCGCCAGCGCCAGGGCC 240
                       **   **    ** *** *  *  * ***  ** *   ***  ****        * * *

consensus_13416#0      GCCGGCGGCGGGCGCCACGGGGCCGCCGAACGTGACGGCGGTCCTGGAGAAGGGAGGGCA 184
consensus_13416#2      GCCGGCGGNGG-CNCCACGGNGCCNCCGAACNTAACGGCNGTCCTNGAGAAGGGAGGGCA 136
consensus_13416#1      GTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTCTTGTAAGACGGCGCA 300
                       * **** * **   *  ***   * ***    *   *** * *      ***   * ***

consensus_13416#0      -GTACACGACGTTC-ATCCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGC 242
consensus_13416#2      -GTACACGACGTTC-ATCCGGCTNATNAAGGANACGCANCANGACACGCANC-------- 186
consensus_13416#1      CGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTTTCTTTTCTTTTTTTT 360
                        * ****** * ** *    ***    * *   * ***        *    *        

consensus_13416#0      CAGCTGAACAACTCCTTCAACGGCAACGGCTACACCGTGTTCGCGCCTACCGACAACGCC 302
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      TTTCCTTTTTTTCCTCTTCCCTCACACACTCGGCCCAACCCGCCCCACACACAGTTAATA 420
                                                                                   

consensus_13416#0      TTCAACAACCTCAAGCCGGGCACCCTCAACAGCCTGACGCAGCAGCAGCAGGTGGCGCTC 362
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ACAGACGCGTACCACTGGCCGTGTGCGCGTTCGCCTTGCCGCATCCAATGGACCTCCCTC 480
                                                                                   

consensus_13416#0      GTCCAGGGCCACGTCCTCCCGCAGTTCTACTCCATGGACTCCTTCCAGACGGCCAGCAAC 422
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      CCCCCCCCGTGCGCCATAGCGCTCTACCACTCACACTCTCCGTACGTCACCTAA------ 534
                                                                                   

consensus_13416#0      CCCGTCCGCACCCAGGCGTCCGGCACCGACGGCCCCTACACCCTCAACATCACCTCCACC 482
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      ACCAACAACAACGTCAACGTCTCCACCGGCGTCGTCGAGGTCACCGTCACCAACGCGCTC 542
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      AGCGCGGTCAAGCCGCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTCCCCTTCGAGCTC 602
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      TTCGGCGTCAAGGCCCCCGCCGCCGCGCCCACCGCGTCGACCGCCAAGCCCAAGAAGGGT 662
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      GGCTCCACGGAGGCCGCCTCCGGCCCCGCCGGCGCGGAGGACGCCGAGCCCACGGGCGCC 722
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      GCCAGCGCCAGGGCCGTCGGCTGGGGCGTCGCCGGGCTCGCCGCCGTTGTTGGCTGCCTC 782
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      TTGTAAGACGGTGTACGGACACGATGGTCGAGGAAGCTAGCCATGTGCATGCATTTCTTT 842
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      TCTTTTCTTTTTTTTTCCTTTTTTTCCTTTTCTTTCATTCTTCCTCTCTCCATGTTTAAA 902
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      TTTATTTGATTTTGACTAGTTTGTTCTTTACATTATTCTTGTTCTTGGTGGTTTGTAATA 962
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      TTGGGCTGTGTGATTGGAGTTTTCTGTCTGAGGCCGGGATGTTAATAATGCATTAGTACA 1022
consensus_13416#2      ------------------------------------------------------------
consensus_13416#1      ------------------------------------------------------------
                                                                                   

consensus_13416#0      TTTTGAGTCAAAAAAAAAAAAAAAAAAAAAAAAA 1056
consensus_13416#2      ----------------------------------
consensus_13416#1      ----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)