These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13417#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1750 fasta sequence [CTTCCTTGCGCGCGCGAGGAGAAACAGAGTTGGAGGCGATGGCGGCGGCGTCGGCGGCGAAGGAGCTCCACTTCTTGCTGGTGCCGCTGGTGGCGCAGGGCCACATCATCCCTATGGTGGACCTGGCGCGCCTCCTCGCCGGCCGCGGCGCGCGCGTCACGGTGGTCACCACGCCGGTCAACGCCGCGCGCAACAGGGCGGCCGTCGAGGGAGCGCGGCGGGGAGGGCTCGCCGTCGAGCTCGCCGAGATCACCTTCACCGGCCCGGAGTTCGGCCTGCCGGAGGGCGTGGAGAACATGGACCAGTTGGTGGACATCGCCATGTACCTGGCTTTCTTCAAGGCCGTGTGGAACATGGAGGCGGCGCTCGAGGCGTACGTGCGCGCGCTGCCTCGCCGCCCGGACTGCGTCGTCGCCGACGCCTGCAACCCGTGGACGGCGGCCGTGTGCGAACGCCTCGCCATCCCGCGCCTCGTGCTGCACTGCCCCTCCGTCTACTTCCTCCTCGCCATCCACTGCCTCGCCAAGCACGGCGTGTACGACCGCGTCGCCGACCAGCTCGAGCCGTTCGAGGTGCCGGGCTTCCCCGTGCGCGCCGTCGTCAACACGGCCACGTGCCGCGGCTTCTTCCAGTGGCCCGGCGCGGAGAAGCTGGCGCGCGACGTGGTCGACGGCGAGGCCACCGCTGACGGCCTGCTCCTCAACACGTTCCGCGACGTCGAGGGCGTCTTCGTGGACGCGTACGCGTCGGCGCTCGGCCTGAGGGCGTGGGCCATCGGGCCGACGTGCGCCGCCAGGCTGGACGACGCCGACTCCAGCGCCAGCCGTGGCAACCGCGCCGTCGTCGACGCCGCCCGGATCGTCTCGTGGCTCGACGCCCGGCCGCCGGCGTCCGTGCTGTACGTCAGCTTCGGCAGCCTCACGCACCTCCGGGCGACGCAGGCGATCGAGCTCGCCCGCGGCCTGGAGGAGTCGGGGTGGCCGTTCGTGTGGGCGATCAAGGAGGCGACGGCCGCCGCCGTGAGCGAGTGGCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTGACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACGTGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTGCTCCGCGTCGGCGTCAGGTCGGGCGTCACGGTGCCCCCCATGTTCCTCCCCGCCGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCACGCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTTTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCTGCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAA-A---AAAAGAA--A--C-CAAAAAAAAAAATAAAAGAGA] [+] EMBL CB644746 [CTTCCTTGCGCGCGCGAGGAGAAACAGAGTTGGAGGCGATGGCGGCGGCGTCGGCGGCGAAGGAGCTCCACTTCTTGCTGGTGCCGCTGGTGGCGCAGGGCCACATCATCCCTATGGTGGACCTGGCGCGCCTCCTCGCCGGCCGCGGCGCGCGCGTCACGGTGGTCACCACGCCGGTCAACGCCGCGCGCAACAGGGCGGCCGTCGAGGGAGCGCGGCGGGGAGGGCTCGCCGTCGAGCTCGCCGAGATCACCTTCACCGGCCCGGAGTTCGGCCTGCCGGAGGGCGTGGAGAACATGGACCAGTTGGTGGACATCGCCATGTACCTGGCTTTCTTCAAGGCCGTGTGGAACATGGAGGCGGCGCTCGAGGCGTACGTGCGCGCGCTGCCTCGCCGCCCGGACTGCGTCGTCGCCGACGCCTGCAACCCGTGGACGGCGGCCGTGTGCGAACGCCTCGCCATCCCGCGCCTCGTGCTGCACTGCCCCTCCGTCTACTTCCTCCTCGCCATCCACTGCCTCGCCAAGCACGGCGTGTACGACCGCGTCGCCGACCAGCTCGAGCCGTTCGAGGTGCCGGGCTTCCCCGTGCGCGCCGTCGTCAACACGGCCACGTGCCGCGGCTTCTTCCAGTGGCCCGGCGCGGAGAAGCTGGCGCGCGACGTGGTCGACGGCGAGGCCACCGCTGACGGCCTGCTCCTCAACACGTTCCGCGACGTCGAGGGCGTCTTCGTGGACGCGTACGCGTCGGCGCTCGGCCTGAGGGCGTGGGCCATCGGGCCGACGTGCGCCG ] [+] EMBL CB676081 [ GCGCGCTTTGAAACAGAGTTGGAGGCGATGGCGGCGGCGTCGGCGGCGAAGGAGCTCCACTTCTTGCTGGTGCCGCTGGTGGCGCAGGGCCACATCATCCCTATGGTGGACCTGGCGCGCCTCCTCGCCGGCCGCGGCGCGCGCGTCACGGTGGTCACCACGCCGGTCAACGCCGCGCGCAACAGGGCGGCCGTCGAGGGAGCGCGGCGGGGAGGGCTCGCCGTCGAGCTCGCCGAGATCACCTTCACCGGCCCGGAGTTCGGCCTGCCGGAGGGCGTGGAGAACATGGACCAGTTGGTGGACATCGCCATGTACCTGGCTTTCTTCAAGGCCGTGTGGAACATGGAGGCGGCGCTCGAGGCGTACGTGCGCGCGCTGCCTCGCCGCCCGGACTGCGTCGTCGCCGACGCCTGCAACCCGTGGACGGCGGCCGTGTGCGAACGCCTCGCCATCCCGCGCCTCGTGCTGCACTGCCCCTCCGTCTACTTCCTCCTCGCCATCCACTGCCTCGCCAAGCACGGCGTGTACGACCGCGTCGCCGACCAGCTCGAGCCGTTCGAGGTGCCGGGCTTCCCCGTGCGCGCCGTCGTCAACACGGCCACGTGCCGCGGCTTCTTCCAGTGGCCCGGCGCGGAGAAGCTGGCGCGCGACGTGGTCGACGGCGAGGCCACCGCTGACGG ] [+] EMBL AK066178 [ AAACAGAGTTGGAGGCGATGGCGGCGGCGTCGGCGGCGAAGGAGCTCCACTTCTTGCTGGTGCCGCTGGTGGCGCAGGGCCACATCATCCCTATGGTGGACCTGGCGCGCCTCCTCGCCGGCCGCGGCGCGCGCGTCACGGTGGTCACCACGCCGGTCAACGCCGCGCGCAACAGGGCGGCCGTCGAGGGAGCGCGGCGGGGAGGGCTCGCCGTCGAGCTCGCCGAGATCACCTTCACCGGCCCGGAGTTCGGCCTGCCGGAGGGCGTGGAGAACATGGACCAGTTGGTGGACATCGCCATGTACCTGGCTTTCTTCAAGGCCGTGTGGAACATGGAGGCGGCGCTCGAGGCGTACGTGCGCGCGCTGCCTCGCCGCCCGGACTGCGTCGTCGCCGACGCCTGCAACCCGTGGACGGCGGCCGTGTGCGAACGCCTCGCCATCCCGCGCCTCGTGCTGCACTGCCCCTCCGTCTACTTCCTCCTCGCCATCCACTGCCTCGCCAAGCACGGCGTGTACGACCGCGTCGCCGACCAGCTCGAGCCGTTCGAGGTGCCGGGCTTCCCCGTGCGCGCCGTCGTCAACACGGCCACGTGCCGCGGCTTCTTCCAGTGGCCCGGCGCGGAGAAGCTGGCGCGCGACGTGGTCGACGGCGAGGCCACCGCTGACGGCCTGCTCCTCAACACGTTCCGCGACGTCGAGGGCGTCTTCGTGGACGCGTACGCGTCGGCGCTCGGCCTGAGGGCGTGGGCCATCGGGCCGACGTGCGCCGCCAGGCTGGACGACGCCGACTCCAGCGCCAGCCGTGGCAACCGCGCCGTCGTCGACGCCGCCCGGATCGTCTCGTGGCTCGACGCCCGGCCGCCGGCGTCCGTGCTGTACGTCAGCTTCGGCAGCCTCACGCACCTCCGGGCGACGCAGGCGATCGAGCTCGCCCGCGGCCTGGAGGAGTCGGGGTGGCCGTTCGTGTGGGCGATCAAGGAGGCGACGGCCGCCGCCGTGAGCGAGTGGCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTGACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACGTGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTGCTCCGCGTCGGCGTCAGGTCGGGCGTCACGGTGCCCCCCATGTTCCTCCCCGCCGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCACGCCGGCCTGACGGACGTGATCGGATACGTCTCGGAGTTTTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCTGCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAA ] [-] EMBL CB644747 [ TCGGGGTGGCCGTTCGTGTGGGCGATCAAGGAGGCGACGGCCGCCGCCGTGAGCGAGTGGCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTGACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACGTGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTGCTCCGCGTCGGCGTCAGGTCGGGCGTCACGGTGCCCCCCATGTTCCTCCCCGCCGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCACGCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTTTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCTGCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAA A AAAAGA ] [-] EMBL CB676082 [ GCTGGAGGCCATTTCCCACGGCGTGCCGGCGCTGACGTGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTTGACGTGCTCCGCGTCGGCGTCAGGTCGGGCGTCACGGTGCCCCCCATGTTCCTCCCCGCAGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCACGCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTTTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATTTCCGGGGGAGCTCGGAGATATTAGCGGCGACAAGGTGGAAGCAGATCCTGCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTGGAAAACATGTATAACAATTATCCTCAAAAAAAAAAATAAAAGAGA] consensusID : consensus_13417#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 794 fasta sequence [ANCNANGNCANTCGCCCGCCTGAATCCACCGCAAGCCGCCGAGCTCGCCGCCGGCCTGGAGGCGTCGCACCGGCCGTTCATCTGGGTGACCAAGGACACCGANGCCGACGCCGCCGCCGCCGCCGGCCTCGACGCGCGGGTGGTGGCGGACCGTGGACTCGTCATCCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCCGGCGGTGGGCGGCTTCCTCACCCACTGCGGCTGGAACTCGACGGTGGAGTCGCTCTCCCATGGCGTGCCGCTCCTGACATGGCCGCACTTTGGCGACCAGTTCCTCAACGAGTGCCTCG-CCGTCGACGTGCTCGGCGCCGGCGTCCGCGCCGGCGTG-AAGGTGCCCGTCACGCACGTCG-ACGCCGTGAACT-CCCCGGTGCAGGTGCGGAGCGGCGAGGTGGCGAGCGCGGTGGAGGAGCTGATGGGCGACGGGGCGGCGGCGGCGGCGAGGCGCGCGAGGGCGAGGGAGCTCGCGGCGGAGGCCAGGGCGGCGATGGCGGACGGCGGGTCGTCGGCGCGCGACCTCGCCGACATGGTCTGGCACGTCGCGCGGAGGAGGGACATGGTTGTGGTTGATCCGCCGCCACCGCCGTCGCCGGGGGGCATCGCCGGTGGCCATGGCAAGATGGTGTCGCCATCAGTGGCATCAGAAGTCGCCTGAATTTTTAGTTGCATATGCGAGTGTTAACTGTAGTAGACGACAATGGCAATAATAATGCTGCATTAAATCTCTCCAGAAAAAAATCGATCTTTGTTATTGTTTTAAAAAA] [+] EMBL C72832 [ANCNANGNCANTCGCCCGCCTGAATCCACCGCAAGCCGCCGAGCTCGCCGCCGGCCTGGAGGCGTCGCACCGGCCGTTCATCTGGGTGACCAAGGACACCGANGCCGACGCCGCCGCCGCCGCCGGCCTCGACGCGCGGGTGGTGGCGGACCGTGGACTCGTCATCCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCCGGCGGTGGGCGGCTTCCTCACCCACTGCGGCTGGAACTCGACGGTGGAGTCGCTCTCCCATGGCGTGCCGCTCCTGACATGGCCGCACTTTGGCGACCAGTTCCTCAACGAGTGCCTCG CNGTCGACGTGCTCGGCGCCGGCGTCCGCG CGGGNTGAAAGGTGCCCGTCANGCACGTCG ACGCCGTGAANT CCCC ] [+] EMBL AU182357 [ TCGCCCGCCTGAATCCACCGCAAGCCGCCGAGCTCGCCGCCGGCCTGGAGGCGTCGCACCGGCCGTTCATCTGGGTGACCAAGGACACCGACGCCGACGCCGCCGCCGCCGCCGGCCTCGACGCGCGGGTGGTGGCGGACCGTGGACTCGTCATCCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCCGGCGGTGGGCGGCTTCCTCACCCACTGCGGCTGGAACTCGACGGTGGAGTCGCTCTCCCATGGCGTGCCGCTCCTGACATGGCCGCACTTTGGCGACCAGTTCCTCAACGAGTGCCTCGCCCGTCGACGTGCTCGGNGCCGGCGTCCGCGCCGGCGTG AAGGTGCCCGTCACGCACGTNG ACGCCGTGAACT CCCCGGTGCAGG ] [+] EMBL AU172534 [ CGTCGACGTGCTCGGCGCCGGCGTCCGCGCCGGCGTG AAGGTGCCCGTCACGCACGTCG ACGCCGTGAACT CCCCGGTGCAGGTGCGGAGCGGCGAGGTGGCGAGCGCGGTGGAGGAGCTGATGGGCGACGGGGCGGCGGCGGCGGCGAGGCGCGCGAGGGCGAGGGAGCTCGCGGCGGAGGCCAGGGCGGCGATGGCGGACGGCGGGTCGTCGGCGCGCGACCTCGCCGACATGGTCTGGCACGTCGCGCGGAGGAGGGACATGGTTGTGGTTGATCCGCCGCCACCGCCGTCGCCGGGGGGCATCGCCGGTGGCCATGGCAAGATGGTGTCGCCATCAGTGGCATCAGAAGTCGCCTGAATTTTTAGTTGCATATGCGAGTGTTAACTGTAGTAGACGACAATGGCAATAATAATGCTGCATTAAATCTCTCCAGAAAAA ] [+] EMBL AU182358 [ GTCACGCACGTCGAACCCCGTGAACTCCCCCGGTGCAGGTGCGGANCGGCGAGGTGGCGAGCGCGGTGGAGGAGCTGATGGGCGACGGGGCGGCGGCGGCGGCGAGGCGCGCGAGGGCGAGGGAGCTCGCGGCGGAGGCCAGGGCGGCGATGGCGGACGGCGGGTCGTCGGCGCGCGACCTCGCCGACATGGTCTGGCACGTCGCGCGGAGGAGGGACATGGTTGTGGTTGATCCGCCGCCACCGCCGTCGCCGGGGGGCATCGCCGGTGGCCATGGCAAGATGGTGTCGCCATCAGTGGCATCAGAAGTCGCCTGAATTTTTAGTTGCATATGCGAGTGTTAACTGTAGTAGACGACAATGGCAATAATAATGCTGCATTAAATCTCTCCAGAATTCAATCGATCTTTGTTATTGTTTTAAAAAA] consensusID : consensus_13417#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 762 fasta sequence [TCGGCACGAGGGAGCGAGTGGCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTGACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACGTGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTG-CTCCGCG-TCGG-C-GT-CAGG-TCGGGCGTCACGGTGCCCCCC-ATGTTCCTCCCCGCCGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCAC-GCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTGTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCT-GCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAACATGTAT-ACCAAAAAAAAAAAACCCCCATAACCTACTATCTTCGTCCTTAAAA] [-] EMBL CB629007 [TCGGCACGAGGGAGCGAGTGGCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTGACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACGTGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTG CTCCGCG TCGG C GT CAGG TCGGGCGTCACGGTGCCCCCC ATGTTCCTCCCCGCCGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCAC GCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTGTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCT GCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAACA ] [+] EMBL CB629006 [ GCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTGACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACGTGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTG CTCCGCG TCGG C GT CAGG TCGGGCGTCACGGTGCCCCCC ATGTTCCTCCCCGCCGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCAC GCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTGTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCT GCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTC ] [+] EMBL BI808514 [ GCAGCTGCTCGTCGACGTG CTCCGCG TCGG C GT CA G TCGGGCGTCACGGTGCCCCCC ATGTTCCTCCCCGCCGAGGCCGAGGGCGTGCAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCAC GCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTGTCGGCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCT GCCTTGTCAGTACCATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACATTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAACATGTATAACCAAAAAAAAAA ] [+] EMBL BM038252 [ GACGTGCCTCCGCGTTCGGTCTGTCCAGGTTTCGGCGTCACGGTGCCCCCCAATGTTCCTCCCC CCGA GCCGAGGGCGT CAGCTCACCAGCGACGGCGTGGTCAA GCGGTGACCGAGCTGATGGACGGCGGAGACGAGGGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAGGAAGGCGGGTCGTCGCACAGCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTGTCGGCGAAGGAACGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCGGCGGAGCTCGGAGATATTA CGNCGACAAGTTCCCNACANNTCCTCCCCTTGTCAGTACAATCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCCCACATTTAGTTTGTNACATTATTAATTAATCACGAATTCGAAAACATGTAT ACCAATTATCCTCAACCCCCATAACCTACTATCTTCGTCCTTAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13417#0 CTTCCTTGCGCGCGCGAGGAGAAACAGAGTTGGAGGCGATGGCGGCGGCGTCGGCGGCGA 60 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 AGGAGCTCCACTTCTTGCTGGTGCCGCTGGTGGCGCAGGGCCACATCATCCCTATGGTGG 120 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 ACCTGGCGCGCCTCCTCGCCGGCCGCGGCGCGCGCGTCACGGTGGTCACCACGCCGGTCA 180 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 ACGCCGCGCGCAACAGGGCGGCCGTCGAGGGAGCGCGGCGGGGAGGGCTCGCCGTCGAGC 240 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 TCGCCGAGATCACCTTCACCGGCCCGGAGTTCGGCCTGCCGGAGGGCGTGGAGAACATGG 300 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 ACCAGTTGGTGGACATCGCCATGTACCTGGCTTTCTTCAAGGCCGTGTGGAACATGGAGG 360 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 CGGCGCTCGAGGCGTACGTGCGCGCGCTGCCTCGCCGCCCGGACTGCGTCGTCGCCGACG 420 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 CCTGCAACCCGTGGACGGCGGCCGTGTGCGAACGCCTCGCCATCCCGCGCCTCGTGCTGC 480 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 ACTGCCCCTCCGTCTACTTCCTCCTCGCCATCCACTGCCTCGCCAAGCACGGCGTGTACG 540 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 ACCGCGTCGCCGACCAGCTCGAGCCGTTCGAGGTGCCGGGCTTCCCCGTGCGCGCCGTCG 600 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 TCAACACGGCCACGTGCCGCGGCTTCTTCCAGTGGCCCGGCGCGGAGAAGCTGGCGCGCG 660 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 ACGTGGTCGACGGCGAGGCCACCGCTGACGGCCTGCTCCTCAACACGTTCCGCGACGTCG 720 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 AGGGCGTCTTCGTGGACGCGTACGCGTCGGCGCTCGGCCTGAGGGCGTGGGCCATCGGGC 780 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 CGACGTGCGCCGCCAGGCTGGACGACGCCGACTCCAGCGCCAGCCGTGGCAACCGCGCCG 840 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 TCGTCGACGCCGCCCGGATCGTCTCGTGGCTCGACGCCCGGCCGCCGGCGTCCGTGCTGT 900 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 ------------------------------------------------------------ consensus_13417#0 ACGTCAGCTTCGGCAGCCTCACGCACCTCCGGGCGACGCAGGCGATCGAGCTCGCCCGCG 960 consensus_13417#2 ------------------------------------------------------------ consensus_13417#1 -------ANCNANGNCANTCGCCCGCCTGAATCCACCGCAAGCCGCCGAGCTCGCCGCCG 53 consensus_13417#0 GCCTGGAGGAGTCGGGGTGGCCGTTCGTGTGGGCGATCAAGGAGGCGACGGCCGCCGCC- 1019 consensus_13417#2 ---------------------------------------------------TCGGCACGA 9 consensus_13417#1 GCCTGGAGGCGTCGCACCGGCCGTTCATCTGGGTGACCAAGGACACCGANGCCGACGCC- 112 ** * * consensus_13417#0 GTGAGCGAGTGGCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTG 1079 consensus_13417#2 GGGAGCGAGTGGCTCGACGGCGAGGGGTACGAGGAGCGCGTCAGCGACAGGGGCCTCCTG 69 consensus_13417#1 -GCCGCCGCCG--CCGGCCTCGACGCGCGGGTGGTG-GCG-----GACCGTGGACTCGTC 163 ** * ** * *** * * * ** * *** *** * ** *** * consensus_13417#0 GTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTG 1139 consensus_13417#2 GTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCCCACCCGGCGGCGGGCGGGTTCCTG 129 consensus_13417#1 ATCCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCCGGCGGTGGGCGGCTTCCTC 223 * ******************************** ********** ****** ***** consensus_13417#0 ACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACG 1199 consensus_13417#2 ACCCACTGCGGCTGGAACGCGACGCTGGAGGCCATCTCCCACGGCGTGCCGGCGCTGACG 189 consensus_13417#1 ACCCACTGCGGCTGGAACTCGACGGTGGAGTCGCTCTCCCATGGCGTGCCGCTCCTGACA 283 ****************** ***** ***** * ******* ********* ***** consensus_13417#0 TGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTGCTCCGCGTC 1259 consensus_13417#2 TGGCCCAACTTCTCCGACCAGTTCAGCAGCGAGCAGCTGCTCGTCGACGTGCTCCGCGTC 249 consensus_13417#1 TGGCCGCACTTTGGCGACCAGTTCCTCAACGAGTGCCTCGCCGTCGACGTGCTCGGCGCC 343 ***** **** ********** ** **** ** ************* *** * consensus_13417#0 GGCGTCAGGTCGGGCGTCACGGTGCCCCCCATGTTCCTCCCCGCCGAGGCCGAGGGCGTG 1319 consensus_13417#2 GGCGTCAGGTCGGGCGTCACGGTGCCCCCCATGTTCCTCCCCGCCGAGGCCGAGGGCGTG 309 consensus_13417#1 GGCGTCCGCGCCGGCGTGAAGGTGCCCGTCACGCACGTCGACGCCGTGAACTCCCCGGTG 403 ****** * * ***** * ******* ** * * ** ***** * * *** consensus_13417#0 CAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAG 1379 consensus_13417#2 CAGCTCACCAGCGACGGCGTGGTCAAGGCGGTGACCGAGCTGATGGACGGCGGAGACGAG 369 consensus_13417#1 CAGGTGCGGAGCGGCGAGGTGGCGAGCGCGGTGGAGGAGCTGATGGGCGACGGGGCGGCG 463 *** * **** ** **** * ****** ********** ** *** * * * consensus_13417#0 GGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAG 1439 consensus_13417#2 GGGACGGCGAGGAGGGCGCGCGCCAAGGAGCTCGCCGCGAAGGCGAGGGCGGCGATGGAG 429 consensus_13417#1 GCGGCGGCGAGGCGCGCGAGGGCGAGGGAGCTCGCGGCGGAGGCCAGGGCGGCGATGGCG 523 * * ******** * *** * ** * ********* *** **** ************* * consensus_13417#0 GAAGGCGGGTCGTCGCACGCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTTTCG 1499 consensus_13417#2 GAAGGCGGGTCGTCGCACGCCGACCTGACGGACGTGATCGGATACGTCTCGGAGTTGTCG 489 consensus_13417#1 GACGGCGGGTCGTCGGCGCGCGACCTCGCCGACATGGTCTGGCACGTCGCG--------- 574 ** ************ ****** * *** ** ** * ***** ** consensus_13417#0 GCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCG 1559 consensus_13417#2 GCGAAGAAGCGGCAGGAGAGGGACGCCGGCGAGACCGCCCAGCAGCCGCCGCCATCTCCG 549 consensus_13417#1 ------------CGGAGGAGGGACATGGTTGTGGTTGATCCGCCGCCACCGCCGTCGCCG 622 * * ******* * * * * * ** *** ***** ** *** consensus_13417#0 GCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCTGCCTTGTCAGTACAA 1619 consensus_13417#2 GCGGAGCTCGGAGATATTAGCGGCGACAAGGTCGAAGCAGATCCTGCCTTGTCAGTACAA 609 consensus_13417#1 G---------GGGGCATCGCCGGTGGCCATGGC-AAGATGGTGTCGCC--ATCAGTGGCA 670 * * * ** *** * * * * * *** * * *** ***** * consensus_13417#0 TCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACA 1679 consensus_13417#2 TCGTAGATAATACAGTGTGTTACTAGGTTACTAGATTGATGATGATGTAATTAGCGCACA 669 consensus_13417#1 TCAGAAGTCGCCTGAATTTTTAGTTGCATATGCGAGTGTTAAC--TGTAGTAGACGACAA 728 ** * * * *** * * ** ** ** * * **** * ** * consensus_13417#0 TTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAAAAAAAGAAACCAAAAAAAAA 1739 consensus_13417#2 TTTAGGTTGTTACATTATTAATTAATCACGAATTCGAAAACATGTATACCAAAAAAAAAA 729 consensus_13417#1 TGGCAATAATAATGCTGC-ATTAAATCTC---TCCAGAAAAAAATCGATCTTTGTTATTG 784 * * * * * * * **** * * * *** * * * * consensus_13417#0 AATAAAAGAGA---------------------- 1750 consensus_13417#2 AACCCCCATAACCTACTATCTTCGTCCTTAAAA 762 consensus_13417#1 TTTTAAAAAA----------------------- 794 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||