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Oryza sativa
cluster # 13426 cluster # 13426       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13426#0 length = 1025 sequences # 11  
consensus_13426#1 length = 564 sequences # 1  
consensus_13426#2 length = 439 sequences # 1  

consensusID : consensus_13426#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1025
fasta sequence
                              [TCTATTCCTCCTCCTCGCCAAGCCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGCCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGCCCCTGCGGCCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGCCCAACCCCGACCCCAACAACCCCACTCCCCTCACCACCACCGTCGTCACCGTCCTCCGCGTCCGCCGCCTCGGCCCCC-ACCACCCCCTCCAGATCCCCC-GCCCCGATCCCCTCCCCGCCGCCTCCGACGCCGCCTCGTCCGTCCAGGAGC-GCGCCAAGGACATCCTCGTCGTCGTCTCCGGCCTCC-TCTTCGGCTTC-GGCTGCGGCGCCCTCACCGCCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCTTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA-ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT-TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG-AAAAGAAA-CAAATTATGAATA-CGGTC-TTGAT-GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGG-AACATATTTGGTTCTTCTGCTCAGCAAAATTGCAATATGTTGTGTACAACTTCTGGTAAAAAAAAGAGTACTAGCTAGTTTTTCTACTCATGTTTTGTGCAGTTGTGGTCAGTGAATGTGTAGAATTTTCTACCATGAAAGGGCTAATATATTTTGGTAGGCCATCCATTTTGGATGGAGGATCACGATATAGGCCATTCTGGAGCAAACTGAT]

[+] EMBL AK106206             [TCTATTCCTCCTCCTCGCCAAGCCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGCCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGCCCCTGCGGCCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGCCCAACCCCGACCCCAACAACCCCACTCCCCTCACCACCACCGTCGTCACCGTCCTCCGCGTCCGCCGCCTCGGCCCCC ACCACCCCCTCCAGATCCCCC GCCCCGATCCCCTCCCCGCCGCCTCCGACGCCGCCTCGTCCGTCCAGGAGC GCGCCAAGGACATCCTCGTCGTCGTCTCCGGCCTCC TCTTCGGCTTC GGCTGCGGCGCCCTCACCGCCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCTTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA CAAATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGG AACATATTTGGTTCTTCTGCTCAGCAAAATTGCAATATGTTGTGTACAACTTCTGGTAAATTATGGAGTACTAGCTAGTTTTTCTACTCATGTTTTGTGCAGTTGTGGTCAGTGAATGTGTAGAATTTTCTACCATGAAAGGGCTAATATATTTTGGTAGGCCATCCATTTTGGATGGAGGATCACGATATAGGCCATTCTGGAGCAAACTGAT]
[+] EMBL AK066190             [  TATTCCTCCTCCTCGCCAAGCCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGCCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGCCCCTGCGGCCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGCCCAACCCCGACCCCAACAACCCCACTCCCCTCACCACCACCGTCGTCACCGTCCTCCGCGTCCGCCGCCTCGGCCCCC ACCACCCCCTCCAGATCCCCC GCCCCGATCCCCTCCCCGCCGCCTCCGACGCCGCCTCGTCCGTCCAGGAGC GCGCCAAGGACATCCTCGTCGTCGTCTCCGGCCTCC TCTTCGGCTTC GGCTGCGGCGCCCTCACCGCCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCTTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA CAAATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTA                                                                                                                                                                                                                                            ]
[+] EMBL AK066769             [         CCTCCTCGCCAAGCCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGCCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGCCCCTGCGGCCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGCCCAACCCCGACCCCAACAACCCCACTCCCCTCACCACCACCGTCGTCACCGTCCTCCGCGTCCGCCGCCTCGGCCCCC ACCACCCCCTCCAGATCCCCC GCCCCGATCCCCTCCCCGCCGCCTCCGACGCCGCCTCGTCCGTCCAGGAGC GCGCCAAGGACATCCTCGTCGTCGTCTCCGGCCTCC TCTTCGGCTTC GGCTGCGGCGCCCTCACCGCCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCTTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA CAAATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGG AACATATTTG                                                                                                                                                                                                            ]
[+] EMBL OSC860               [                            anATTTTCCCCCAAATCCACCGCNTCGCCATAGCCGCCGCCNCCNCCCNCCTNCNCCTCCTCNCCNTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCA NCGGTCGCCCCTGCGGCCACG CCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGCCCAACCCCGACCCCAACAACCCCACTCCCCTCACCACCACCGTCGTCACCGTCCTCCGCGTCCGCCGCCTCGG CCCC ACCACCCNCTCCAGATCCCCC GCCCCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU164787             [                                                                                                                                                                                                                                     CCGTCNTCACCGTCCTCCGCGTCCGNCGCCTCGGCCCCCAACCACCCCCTCNAGATCCCCC GCCCCGATCCCCTCCCCGCCGCCTCCGACGCCGCCTCGTCCGTCCAGGAGC GCGCCAAGGACATCCTCGTCGTCGTCTCCGGCCTCCTTCTTCGGCTTC GGCTGCGGCGCCCTCACCGCCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCTTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA CAAATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAAaa                                                                                                                                                                                                                                                        ]
[+] EMBL AU101340             [                                                                                                                                                                                                                                                                                           ATCCCCCGGCCCCGATCCCTTCCCCGCGGCTTCCGACGCCGCTTGGTCNGTCCAGAAGCGGCGCCAAGGACATCCTCGTCGTCGTCTCCGGCCTCC TCTTCGGCTTCGGGCTGCGGCGCCCTCACCGCCGCGACCATG ACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCTTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA CAAATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGG AACATATTTGGTTCTTCTGCTCAGCAAAATTGCAATATGTTGTGTACAACTTCTGGTAAAAAAAAaaa                                                                                                                                                  ]
[+] EMBL BQ908275             [                                                                                                                                                                                                                                                                                                                                                                                      CCTCC TCTTCGGCTTC GGCT CGGCGCCCTCACCGCCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCCTCCTNCGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCC CGACGCCGATACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGAT GCC AT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA C AATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGGAAACATATTTGGTTCTTCTGCTCA C AAATTCCCATATGTTGTGTACAACTTCTGGTAAAAAAAA                                                                                                                                                     ]
[-] EMBL BI794876             [                                                                                                                                                                                                                                                                                                                                                                                        gcg TCGTCGGCTTC GGCTGCGGCGCCCTCACCGCCGCGA CATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCCTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGG CAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTG GGGGTATATATACTACTATTAG A CTATATATGTGTTGGTTTTGT TGA TCAG ATGTGTGTGTGATTCCGAAAAAGAAACCAAATTATGAATACCGGTCTTTGATGGTTTTCTTACATta                                                                                                                                                                                                                                                                      ]
[+] EMBL BI794875             [                                                                                                                                                                                                                                                                                                                                                                                                         GCTGCGGCGCCCTCACCGCCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCCTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA C AATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCAaaaa                                                                                                                                                                                                                             ]
[+] EMBL BI809634             [                                                                                                                                                                                                                                                                                                                                                                                                                    CTCACC CCGCGACCATGTACCTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCCTCCTACGACGAGGTCTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGA ACAGTACGTCGGCGGTAAGAACTA GGGTGGGGAATTGGGCTATCTCGCCGATGGCCAAT TTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA C AATTATGAATA CGGTC TTGAT GTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGG AACATATTTGGTTCTTCTGCTCAGC AAATTGC ATATGTTGTGTAC ACTTCTGGTAAAAAAA                                                                                                                                                      ]
[+] EMBL BQ908148             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgGGGCTATCTCGCCGATGGCCAATGTTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCG AAAAGAAA CAAATTATGAATA CGGTC TTGAT GTTTTCTTAAAAAAaaaa                                                                                                                                                                                                                                                                  ]


>consensus_13426#0 TCTATTCCTCCTCCTCGCCAAGCCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATG GCCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCC CCCGCGGCAGCCGGGCGCCCCTGCGGCCACGCCCAGACGCTCCTCATCTCCTTCTCCTCC GTCTCCAGGCCCAACCCCGACCCCAACAACCCCACTCCCCTCACCACCACCGTCGTCACC GTCCTCCGCGTCCGCCGCCTCGGCCCCCACCACCCCCTCCAGATCCCCCGCCCCGATCCC CTCCCCGCCGCCTCCGACGCCGCCTCGTCCGTCCAGGAGCGCGCCAAGGACATCCTCGTC GTCGTCTCCGGCCTCCTCTTCGGCTTCGGCTGCGGCGCCCTCACCGCCGCGACCATGTAC CTCGTCTGGTCCCTCCTCGCCTCCACCTGCGCTCCTTCCTACGACGAGGTCTACGGCGAA GACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATC CACGACGCCGAACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGC CGATGGCCAATTTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACT ACTATTAGCACCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCGA AAAGAAACAAATTATGAATACGGTCTTGATGTTTTCTTACATAATTTAAAGTGAAACTGA AGTGTCCTTATTTATTGATCATGAAACATGGAACATATTTGGTTCTTCTGCTCAGCAAAA TTGCAATATGTTGTGTACAACTTCTGGTAAAAAAAAGAGTACTAGCTAGTTTTTCTACTC ATGTTTTGTGCAGTTGTGGTCAGTGAATGTGTAGAATTTTCTACCATGAAAGGGCTAATA TATTTTGGTAGGCCATCCATTTTGGATGGAGGATCACGATATAGGCCATTCTGGAGCAAA CTGAT



consensusID : consensus_13426#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence
                              [CCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGNCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGCCCCTGCGGNCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGNCCAACCCCGAACCCAACAACCCCACTCCCCTCAACACCACCGTCGTCACCGTTCTCCGCGGTCGCCGNCTCGGNCCCCAACACCCCCCTCCGATCCNNCCGCCCGATTCCCTTCCGNCGNCNCCAAAGNCNNCNCGTCCGTNCGGAAACGCGCNNAGACATTCTCGTCGTCGTCTCCCGCCTTCTCTTCNGNTTCNGNTGGGCGGGCCTCACCGCCNCGACCATGTAACTCGTCTGGGTCCTCCTCGNCNCCNCCTGGGCTCCTCCTACAACAAGTCTACGGGAAAACAACACCACCAACTGTCGAACTCCAAAGCCCCAGAAGGCGGAAAGTCTTTATCCACAACCCAAAAAAACTTCCGCGTAGAAATAGGGTGGGGAATTGGGTATCTCGCCA]

[+] EMBL CA754990             [CCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGNCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGCCCCTGCGGNCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGNCCAACCCCGAACCCAACAACCCCACTCCCCTCAACACCACCGTCGTCACCGTTCTCCGCGGTCGCCGNCTCGGNCCCCAACACCCCCCTCCGATCCNNCCGCCCGATTCCCTTCCGNCGNCNCCAAAGNCNNCNCGTCCGTNCGGAAACGCGCNNAGACATTCTCGTCGTCGTCTCCCGCCTTCTCTTCNGNTTCNGNTGGGCGGGCCTCACCGCCNCGACCATGTAACTCGTCTGGGTCCTCCTCGNCNCCNCCTGGGCTCCTCCTACAACAAGTCTACGGGAAAACAACACCACCAACTGTCGAACTCCAAAGCCCCAGAAGGCGGAAAGTCTTTATCCACAACCCAAAAAAACTTCCGCGTAGAAATAGGGTGGGGAATTGGGTATCTCGCCA]


>consensus_13426#1 CCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGNCGCCGCCGCCGCCCGCCTCC TCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGCCCCT GCGGNCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGNCCAACCCCGAAC CCAACAACCCCACTCCCCTCAACACCACCGTCGTCACCGTTCTCCGCGGTCGCCGNCTCG GNCCCCAACACCCCCCTCCGATCCNNCCGCCCGATTCCCTTCCGNCGNCNCCAAAGNCNN CNCGTCCGTNCGGAAACGCGCNNAGACATTCTCGTCGTCGTCTCCCGCCTTCTCTTCNGN TTCNGNTGGGCGGGCCTCACCGCCNCGACCATGTAACTCGTCTGGGTCCTCCTCGNCNCC NCCTGGGCTCCTCCTACAACAAGTCTACGGGAAAACAACACCACCAACTGTCGAACTCCA AAGCCCCAGAAGGCGGAAAGTCTTTATCCACAACCCAAAAAAACTTCCGCGTAGAAATAG GGTGGGGAATTGGGTATCTCGCCA



consensusID : consensus_13426#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence
                              [CCGCCGCGACCATGTACCTGGTTTGGTCCCTCCTCGCCTCCACTTGCGCTCCTTCCTACGACGAGGTTTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGAACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAATTTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCCCCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCGAAAAGAAACAAATTATGAATACGGCCTTGATGTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGGAACATATTTGGTTCAAAAAAAAAAAAAAAAA]

[-] EMBL CF314666             [CCGCCGCGACCATGTACCTGGTTTGGTCCCTCCTCGCCTCCACTTGCGCTCCTTCCTACGACGAGGTTTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGGCCGGATACGTCATCATCCACGACGCCGAACAGTACGTCGGCGGTAAGAACTAGGGGTGGGGAATTGGGCTATCTCGCCGATGGCCAATTTAAGAATTTGTGATAAATGATCGCGTGGATTTGCGGGGTATATATACTACTATTAGCCCCTATATATGTGTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCGAAAAGAAACAAATTATGAATACGGCCTTGATGTTTTCTTACATAATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGGAACATATTTGGTTCAAAAAAAAAAAAAAAAA]


>consensus_13426#2 CCGCCGCGACCATGTACCTGGTTTGGTCCCTCCTCGCCTCCACTTGCGCTCCTTCCTACG ACGAGGTTTACGGCGAAGACGACGACGACGAGCTGTCCGACTCCGAGAGCCCCAAGAAGG CCGGATACGTCATCATCCACGACGCCGAACAGTACGTCGGCGGTAAGAACTAGGGGTGGG GAATTGGGCTATCTCGCCGATGGCCAATTTAAGAATTTGTGATAAATGATCGCGTGGATT TGCGGGGTATATATACTACTATTAGCCCCTATATATGTGTTGCGTCTGTCTGACTCAGTA TGTGTGTGTGATTTCGAAAAGAAACAAATTATGAATACGGCCTTGATGTTTTCTTACATA ATTTAAAGTGAAACTGAAGTGTCCTTATTTATTGATCATGAAACATGGAACATATTTGGT TCAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13426#0      TCTATTCCTCCTCCTCGCCAAGCCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATG 60
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      ------------------------------------------------------------
                                                                                   

consensus_13426#0      GCCGCCGCCGCCGCCCGCCTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCC 120
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      ------------------------------------------------------------
                                                                                   

consensus_13426#0      CCCGCGGCAGCCGGGCGCCCCTGCGGCCACGCCCAGACGCTCCTCATCTCCTTCTCCTCC 180
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      ------------------------------------------------------------
                                                                                   

consensus_13426#0      GTCTCCAGGCCCAACCCCGACCCCAACAACCCCACTCCCCTCACCACCACCGTCGTCACC 240
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      ------------------------------------------------------------
                                                                                   

consensus_13426#0      GTCCTCCGCGTCCGCCGCCTCGGCCCCCACCACCCCCTCCAGATCCCCCGCCCCGATCCC 300
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      ------------------------------------------------------------
                                                                                   

consensus_13426#0      CTCCCCGCCGCCTCCGACGCCGCCTCGTCCGTCCAGGAGCGCGCCAAGGACATCCTCGTC 360
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      ------------------------------------------------------------
                                                                                   

consensus_13426#0      GTCGTCTCCGGCCTCCTCTTCGGCTTCGGCTGCGGCGCCCTCACCGCCGCGACCATGTAC 420
consensus_13426#2      -------------------------------------------CCGCCGCGACCATGTAC 17
consensus_13426#1      ----CCAGCGGAATTTTCCCCCAAATCCACCGCGTCGCCATGGNCGCCGCCGCCGCCCGC 56
                                                                   ******  **     *

consensus_13426#0      CTCGTCTGGTCCCTCCTCGCCTCCAC-----CTGCGCTCCTTCCTACGAC----GAGGTC 471
consensus_13426#2      CTGGTTTGGTCCCTCCTCGCCTCCAC-----TTGCGCTCCTTCCTACGAC----GAGGTT 68
consensus_13426#1      CTCCTCCTCCTCGCCGTCGTCGCCGCGGTGTTCCTCCTCTCCCCCGCGGCAGCCGGGCGC 116
                       **  *      *  * *** * ** *          ***   **  ** *    * *   

consensus_13426#0      TACGGCGAAGACGAC--GACGACGAGC-TGTCCGACTCCGAGAGCCCCAAGA---AGGCC 525
consensus_13426#2      TACGGCGAAGACGAC--GACGACGAGC-TGTCCGACTCCGAGAGCCCCAAGA---AGGCC 122
consensus_13426#1      CCCTGCGGNCACGCCCAGACGCTCCTCATCTCCTTCTCCTCCGTCTCCAGGNCCAACCCC 176
                         * ***   *** *  ****     * * ***  ****     * *** *    *  **

consensus_13426#0      GGATACGTCATCATCCACGACGCCGAACAGTAC-GTCGGCGGTAAGAACTAGGGGTGGGG 584
consensus_13426#2      GGATACGTCATCATCCACGACGCCGAACAGTAC-GTCGGCGGTAAGAACTAGGGGTGGGG 181
consensus_13426#1      GAACCCAACAAC-CCCACTCCCCTCAACACCACCGTCGTCACCGTTCTCCGCGGTCGCCG 235
                       * *  *  ** *  ****  * *  ****  ** **** *        *   **  *  *

consensus_13426#0      AATTGGGCTATCTCGCCGATGGCCAATTTAA------GAAT--------TTGTGATAAAT 630
consensus_13426#2      AATTGGGCTATCTCGCCGATGGCCAATTTAA------GAAT--------TTGTGATAAAT 227
consensus_13426#1      NCTCGGNCCCCAACACCCCCCTCCGATCCNNCCGCCCGATTCCCTTCCGNCGNCNCCAAA 295
                         * ** *     * **     ** **          ** *          *     ** 

consensus_13426#0      GATCGCGTGGATTTGCGGG-----GTATATATACTACTATTAGC----ACCTATATATGT 681
consensus_13426#2      GATCGCGTGGATTTGCGGG-----GTATATATACTACTATTAGC----CCCTATATATGT 278
consensus_13426#1      GNCNNCNCGTCCGTNCGGAAACGCGCNNAGACATTCTCGTCGTCGTCTCCCGCCTTCTCT 355
                       *    *  *    * ***      *   * * * *    *   *     **    * * *

consensus_13426#0      GTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCGAAAAGAAACAAA----TTATGA 737
consensus_13426#2      GTTGCGTCTGTCTGACTCAGTATGTGTGTGTGATTTCGAAAAGAAACAAA----TTATGA 334
consensus_13426#1      TCNGNTTCNGNTGGGCGGGCCTCACCGCCNCGACCATGTAACTCGTCTGGGTCCTCCTCG 415
                          *  ** *   * *               **    * **     *       *  *  

consensus_13426#0      ATACGGTCTTGATGTTTTCTTACATAATTTAAAGTGAAACTGA-------AGTGTCCTTA 790
consensus_13426#2      ATACGGCCTTGATGTTTTCTTACATAATTTAAAGTGAAACTGA-------AGTGTCCTTA 387
consensus_13426#1      NCNCCNCCTGGGCTCCTCCTACAACAAGTCTACGGGAAAACAACACCACCAACTGTCGAA 475
                          *   ** *     * **   * ** *  * * ****   *       *     *  *

consensus_13426#0      TTTATTGATCATGAAACATGGAACATATTTGGTTCTTCTGCTCAGCAAAATTGCAATATG 850
consensus_13426#2      TTTATTGATCATGAAACATGGAACATATTTGGTTCAAAAAAAAAAAAAAAAA-------- 439
consensus_13426#1      CTCCAAAGCCCCAGAAGGCGGAAAGTCTTTA-TCCACAACCCAAAAAAACTTCCGCGTAG 534
                        *       *    **   ****  * ***  * *        *  ***           

consensus_13426#0      TTGTGTACAACTTCTGGTAAAAAAAAGAGTACTAGCTAGTTTTTCTACTCATGTTTTGTG 910
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      AAATAGGGTGGGGAATTGGGTATCTCGCCA------------------------------ 564
                                                                                   

consensus_13426#0      CAGTTGTGGTCAGTGAATGTGTAGAATTTTCTACCATGAAAGGGCTAATATATTTTGGTA 970
consensus_13426#2      ------------------------------------------------------------
consensus_13426#1      ------------------------------------------------------------
                                                                                   

consensus_13426#0      GGCCATCCATTTTGGATGGAGGATCACGATATAGGCCATTCTGGAGCAAACTGAT 1025
consensus_13426#2      -------------------------------------------------------
consensus_13426#1      -------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)